Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25988.t1 | XP_003601227.1 | 97.6 | 329 | 8 | 0 | 1 | 329 | 1 | 329 | 8.80E-175 | 622.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25988.t1 | Q6RVV4 | 44.6 | 312 | 169 | 2 | 13 | 324 | 9 | 316 | 1.0e-67 | 258.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25988.t1 | G7J4W0 | 97.6 | 329 | 8 | 0 | 1 | 329 | 1 | 329 | 6.3e-175 | 622.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049346 | MS.gene25988 | 0.853487 | 2.31E-61 | -1.69E-46 |
| MS.gene049351 | MS.gene25988 | 0.844454 | 7.49E-59 | -1.69E-46 |
| MS.gene049427 | MS.gene25988 | 0.839651 | 1.40E-57 | -1.69E-46 |
| MS.gene049491 | MS.gene25988 | 0.844653 | 6.62E-59 | -1.69E-46 |
| MS.gene049614 | MS.gene25988 | 0.805834 | 1.10E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene25988 | 0.835689 | 1.45E-56 | -1.69E-46 |
| MS.gene049662 | MS.gene25988 | 0.837021 | 6.65E-57 | -1.69E-46 |
| MS.gene049681 | MS.gene25988 | 0.8033 | 3.72E-49 | -1.69E-46 |
| MS.gene049758 | MS.gene25988 | 0.841599 | 4.31E-58 | -1.69E-46 |
| MS.gene050076 | MS.gene25988 | 0.87455 | 6.19E-68 | -1.69E-46 |
| MS.gene050099 | MS.gene25988 | 0.820422 | 6.92E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene25988 | 0.873449 | 1.46E-67 | -1.69E-46 |
| MS.gene050397 | MS.gene25988 | 0.869234 | 3.61E-66 | -1.69E-46 |
| MS.gene050404 | MS.gene25988 | 0.814623 | 1.40E-51 | -1.69E-46 |
| MS.gene050406 | MS.gene25988 | 0.830378 | 3.04E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene25988 | 0.873913 | 1.02E-67 | -1.69E-46 |
| MS.gene050464 | MS.gene25988 | 0.816499 | 5.36E-52 | -1.69E-46 |
| MS.gene050529 | MS.gene25988 | 0.84806 | 7.79E-60 | -1.69E-46 |
| MS.gene050670 | MS.gene25988 | 0.821088 | 4.86E-53 | -1.69E-46 |
| MS.gene050767 | MS.gene25988 | 0.817838 | 2.68E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene25988 | 0.820451 | 6.81E-53 | -1.69E-46 |
| MS.gene050783 | MS.gene25988 | 0.812138 | 4.93E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene25988 | 0.817667 | 2.93E-52 | -1.69E-46 |
| MS.gene05101 | MS.gene25988 | 0.887766 | 1.07E-72 | -1.69E-46 |
| MS.gene05105 | MS.gene25988 | 0.8352 | 1.93E-56 | -1.69E-46 |
| MS.gene051387 | MS.gene25988 | 0.806886 | 6.62E-50 | -1.69E-46 |
| MS.gene051471 | MS.gene25988 | 0.838093 | 3.53E-57 | -1.69E-46 |
| MS.gene051582 | MS.gene25988 | 0.838358 | 3.02E-57 | -1.69E-46 |
| MS.gene051663 | MS.gene25988 | 0.80529 | 1.43E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene25988 | 0.81162 | 6.39E-51 | -1.69E-46 |
| MS.gene051877 | MS.gene25988 | 0.829507 | 4.95E-55 | -1.69E-46 |
| MS.gene052011 | MS.gene25988 | -0.80065 | 1.30E-48 | -1.69E-46 |
| MS.gene052078 | MS.gene25988 | 0.855968 | 4.42E-62 | -1.69E-46 |
| MS.gene052178 | MS.gene25988 | 0.803742 | 3.02E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene25988 | 0.82791 | 1.20E-54 | -1.69E-46 |
| MS.gene052207 | MS.gene25988 | 0.806214 | 9.17E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene25988 | 0.86394 | 1.74E-64 | -1.69E-46 |
| MS.gene052287 | MS.gene25988 | 0.816142 | 6.44E-52 | -1.69E-46 |
| MS.gene052290 | MS.gene25988 | 0.806115 | 9.62E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene25988 | 0.861232 | 1.19E-63 | -1.69E-46 |
| MS.gene052322 | MS.gene25988 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene052326 | MS.gene25988 | 0.850108 | 2.10E-60 | -1.69E-46 |
| MS.gene052340 | MS.gene25988 | 0.853344 | 2.54E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene25988 | 0.807136 | 5.86E-50 | -1.69E-46 |
| MS.gene052481 | MS.gene25988 | 0.828342 | 9.49E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene25988 | 0.854674 | 1.05E-61 | -1.69E-46 |
| MS.gene053103 | MS.gene25988 | 0.819739 | 9.92E-53 | -1.69E-46 |
| MS.gene053209 | MS.gene25988 | 0.845333 | 4.33E-59 | -1.69E-46 |
| MS.gene053322 | MS.gene25988 | 0.830193 | 3.37E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene25988 | 0.834668 | 2.62E-56 | -1.69E-46 |
| MS.gene053813 | MS.gene25988 | 0.801057 | 1.08E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene25988 | 0.865694 | 4.90E-65 | -1.69E-46 |
| MS.gene053971 | MS.gene25988 | 0.821384 | 4.16E-53 | -1.69E-46 |
| MS.gene054011 | MS.gene25988 | 0.807339 | 5.31E-50 | -1.69E-46 |
| MS.gene054013 | MS.gene25988 | 0.800828 | 1.20E-48 | -1.69E-46 |
| MS.gene054123 | MS.gene25988 | 0.810338 | 1.21E-50 | -1.69E-46 |
| MS.gene054376 | MS.gene25988 | 0.827049 | 1.94E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene25988 | 0.833933 | 4.01E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene25988 | 0.823715 | 1.19E-53 | -1.69E-46 |
| MS.gene054802 | MS.gene25988 | 0.838681 | 2.49E-57 | -1.69E-46 |
| MS.gene054803 | MS.gene25988 | 0.834387 | 3.09E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene25988 | 0.837033 | 6.60E-57 | -1.69E-46 |
| MS.gene055116 | MS.gene25988 | 0.85744 | 1.63E-62 | -1.69E-46 |
| MS.gene055254 | MS.gene25988 | 0.806565 | 7.73E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene25988 | 0.884312 | 2.13E-71 | -1.69E-46 |
| MS.gene055390 | MS.gene25988 | 0.835844 | 1.32E-56 | -1.69E-46 |
| MS.gene055397 | MS.gene25988 | 0.801986 | 6.95E-49 | -1.69E-46 |
| MS.gene055412 | MS.gene25988 | 0.808932 | 2.43E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene25988 | 0.848003 | 8.08E-60 | -1.69E-46 |
| MS.gene055428 | MS.gene25988 | 0.870202 | 1.74E-66 | -1.69E-46 |
| MS.gene055499 | MS.gene25988 | 0.805924 | 1.06E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene25988 | 0.802864 | 4.58E-49 | -1.69E-46 |
| MS.gene055896 | MS.gene25988 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene25988 | 0.861344 | 1.10E-63 | -1.69E-46 |
| MS.gene056407 | MS.gene25988 | 0.852669 | 3.97E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene25988 | 0.843003 | 1.83E-58 | -1.69E-46 |
| MS.gene056451 | MS.gene25988 | 0.828747 | 7.57E-55 | -1.69E-46 |
| MS.gene056452 | MS.gene25988 | 0.820828 | 5.58E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene25988 | 0.815876 | 7.38E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene25988 | 0.84742 | 1.17E-59 | -1.69E-46 |
| MS.gene056659 | MS.gene25988 | 0.814039 | 1.89E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene25988 | 0.805427 | 1.34E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene25988 | 0.827446 | 1.56E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene25988 | 0.869604 | 2.73E-66 | -1.69E-46 |
| MS.gene057121 | MS.gene25988 | 0.832745 | 7.93E-56 | -1.69E-46 |
| MS.gene057123 | MS.gene25988 | 0.822739 | 2.02E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene25988 | 0.807065 | 6.06E-50 | -1.69E-46 |
| MS.gene057146 | MS.gene25988 | 0.848744 | 5.04E-60 | -1.69E-46 |
| MS.gene057245 | MS.gene25988 | 0.801209 | 1.00E-48 | -1.69E-46 |
| MS.gene05733 | MS.gene25988 | 0.847065 | 1.46E-59 | -1.69E-46 |
| MS.gene057448 | MS.gene25988 | 0.807444 | 5.04E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene25988 | 0.815206 | 1.04E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene25988 | 0.829912 | 3.95E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene25988 | 0.826478 | 2.65E-54 | -1.69E-46 |
| MS.gene058002 | MS.gene25988 | 0.860576 | 1.88E-63 | -1.69E-46 |
| MS.gene058019 | MS.gene25988 | 0.801115 | 1.05E-48 | -1.69E-46 |
| MS.gene05811 | MS.gene25988 | 0.853169 | 2.85E-61 | -1.69E-46 |
| MS.gene058233 | MS.gene25988 | 0.856196 | 3.79E-62 | -1.69E-46 |
| MS.gene058276 | MS.gene25988 | 0.814968 | 1.18E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene25988 | 0.847209 | 1.34E-59 | -1.69E-46 |
| MS.gene058365 | MS.gene25988 | 0.825088 | 5.67E-54 | -1.69E-46 |
| MS.gene058660 | MS.gene25988 | 0.886984 | 2.12E-72 | -1.69E-46 |
| MS.gene05886 | MS.gene25988 | 0.802677 | 5.01E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene25988 | 0.800088 | 1.70E-48 | -1.69E-46 |
| MS.gene05907 | MS.gene25988 | 0.882467 | 1.02E-70 | -1.69E-46 |
| MS.gene059141 | MS.gene25988 | 0.801978 | 6.98E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene25988 | 0.818344 | 2.06E-52 | -1.69E-46 |
| MS.gene059420 | MS.gene25988 | 0.823854 | 1.11E-53 | -1.69E-46 |
| MS.gene059518 | MS.gene25988 | 0.827696 | 1.36E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene25988 | 0.829295 | 5.57E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene25988 | 0.867431 | 1.38E-65 | -1.69E-46 |
| MS.gene059676 | MS.gene25988 | 0.842543 | 2.42E-58 | -1.69E-46 |
| MS.gene059688 | MS.gene25988 | 0.877057 | 8.53E-69 | -1.69E-46 |
| MS.gene059692 | MS.gene25988 | 0.880919 | 3.69E-70 | -1.69E-46 |
| MS.gene059695 | MS.gene25988 | 0.878731 | 2.21E-69 | -1.69E-46 |
| MS.gene05984 | MS.gene25988 | 0.83605 | 1.17E-56 | -1.69E-46 |
| MS.gene059894 | MS.gene25988 | 0.852762 | 3.73E-61 | -1.69E-46 |
| MS.gene059960 | MS.gene25988 | 0.833908 | 4.07E-56 | -1.69E-46 |
| MS.gene059974 | MS.gene25988 | 0.817889 | 2.61E-52 | -1.69E-46 |
| MS.gene06037 | MS.gene25988 | 0.850445 | 1.69E-60 | -1.69E-46 |
| MS.gene060403 | MS.gene25988 | 0.838256 | 3.20E-57 | -1.69E-46 |
| MS.gene060407 | MS.gene25988 | 0.826449 | 2.70E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene25988 | 0.833618 | 4.81E-56 | -1.69E-46 |
| MS.gene06090 | MS.gene25988 | 0.8077 | 4.45E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene25988 | 0.882758 | 7.97E-71 | -1.69E-46 |
| MS.gene061051 | MS.gene25988 | -0.834101 | 3.64E-56 | -1.69E-46 |
| MS.gene061200 | MS.gene25988 | 0.827636 | 1.40E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49120 | MS.gene25988 | PPI |
| MS.gene34138 | MS.gene25988 | PPI |
| MS.gene25988 | MS.gene49118 | PPI |
| MS.gene34140 | MS.gene25988 | PPI |
| MS.gene061155 | MS.gene25988 | PPI |
| MS.gene25988 | MS.gene49117 | PPI |
| MS.gene25988 | MS.gene061158 | PPI |
| MS.gene006263 | MS.gene25988 | PPI |
| MS.gene25988 | MS.gene006264 | PPI |
| MS.gene25988 | MS.gene061157 | PPI |
| MS.gene34141 | MS.gene25988 | PPI |
| MS.gene25988 | MS.gene006265 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25988.t1 | MTR_3g077410 | 97.568 | 329 | 8 | 0 | 1 | 329 | 1 | 329 | 0.0 | 664 |
| MS.gene25988.t1 | MTR_4g105310 | 83.333 | 330 | 55 | 0 | 1 | 330 | 12 | 341 | 0.0 | 578 |
| MS.gene25988.t1 | MTR_4g105310 | 82.677 | 254 | 44 | 0 | 1 | 254 | 12 | 265 | 8.84e-158 | 442 |
| MS.gene25988.t1 | MTR_8g099995 | 52.923 | 325 | 149 | 2 | 1 | 323 | 1 | 323 | 6.43e-123 | 356 |
| MS.gene25988.t1 | MTR_7g099850 | 49.536 | 323 | 158 | 3 | 1 | 322 | 1 | 319 | 1.53e-104 | 309 |
| MS.gene25988.t1 | MTR_1g068970 | 47.826 | 322 | 164 | 2 | 1 | 322 | 1 | 318 | 1.27e-102 | 304 |
| MS.gene25988.t1 | MTR_8g098415 | 44.805 | 308 | 166 | 2 | 7 | 314 | 2 | 305 | 7.63e-93 | 279 |
| MS.gene25988.t1 | MTR_8g098415 | 44.805 | 308 | 166 | 2 | 7 | 314 | 2 | 305 | 1.10e-92 | 278 |
| MS.gene25988.t1 | MTR_1g100395 | 47.115 | 312 | 161 | 2 | 13 | 324 | 8 | 315 | 5.22e-92 | 277 |
| MS.gene25988.t1 | MTR_6g053550 | 47.097 | 310 | 159 | 2 | 14 | 321 | 17 | 323 | 3.37e-90 | 273 |
| MS.gene25988.t1 | MTR_1g100305 | 44.231 | 312 | 170 | 2 | 13 | 324 | 8 | 315 | 3.47e-89 | 270 |
| MS.gene25988.t1 | MTR_1g100335 | 44.231 | 312 | 170 | 2 | 13 | 324 | 8 | 315 | 1.12e-85 | 261 |
| MS.gene25988.t1 | MTR_1g100315 | 43.269 | 312 | 173 | 2 | 13 | 324 | 8 | 315 | 5.44e-84 | 256 |
| MS.gene25988.t1 | MTR_1g068970 | 44.841 | 252 | 138 | 1 | 71 | 322 | 1 | 251 | 1.58e-73 | 228 |
| MS.gene25988.t1 | MTR_6g053600 | 46.792 | 265 | 136 | 3 | 15 | 277 | 4 | 265 | 3.36e-72 | 226 |
| MS.gene25988.t1 | MTR_8g098415 | 43.373 | 249 | 140 | 1 | 66 | 314 | 1 | 248 | 2.44e-71 | 222 |
| MS.gene25988.t1 | MTR_1g100335 | 45.968 | 248 | 131 | 1 | 13 | 260 | 8 | 252 | 2.27e-67 | 213 |
| MS.gene25988.t1 | MTR_1g100335 | 45.161 | 248 | 132 | 2 | 13 | 260 | 8 | 251 | 5.46e-67 | 211 |
| MS.gene25988.t1 | MTR_8g098415 | 46.575 | 219 | 114 | 1 | 7 | 225 | 2 | 217 | 2.03e-63 | 201 |
| MS.gene25988.t1 | MTR_8g022500 | 64.865 | 111 | 14 | 1 | 42 | 152 | 431 | 516 | 9.29e-34 | 130 |
| MS.gene25988.t1 | MTR_3g091070 | 31.579 | 304 | 167 | 11 | 35 | 321 | 38 | 317 | 4.84e-29 | 114 |
| MS.gene25988.t1 | MTR_6g041980 | 29.924 | 264 | 168 | 7 | 37 | 298 | 66 | 314 | 1.53e-28 | 113 |
| MS.gene25988.t1 | MTR_3g009190 | 29.642 | 307 | 193 | 8 | 32 | 321 | 57 | 357 | 2.94e-27 | 110 |
| MS.gene25988.t1 | MTR_3g009190 | 29.642 | 307 | 193 | 8 | 32 | 321 | 75 | 375 | 3.72e-27 | 110 |
| MS.gene25988.t1 | MTR_6g453040 | 29.316 | 307 | 194 | 8 | 32 | 321 | 35 | 335 | 7.98e-27 | 108 |
| MS.gene25988.t1 | MTR_2g079710 | 27.937 | 315 | 189 | 11 | 39 | 321 | 88 | 396 | 4.21e-25 | 104 |
| MS.gene25988.t1 | MTR_6g081020 | 29.773 | 309 | 179 | 10 | 38 | 321 | 62 | 357 | 2.73e-24 | 102 |
| MS.gene25988.t1 | MTR_3g009190 | 29.252 | 294 | 185 | 8 | 45 | 321 | 69 | 356 | 3.79e-24 | 101 |
| MS.gene25988.t1 | MTR_6g041980 | 29.082 | 196 | 129 | 4 | 37 | 230 | 66 | 253 | 6.84e-20 | 88.2 |
| MS.gene25988.t1 | MTR_4g087460 | 28.667 | 300 | 166 | 8 | 40 | 305 | 24 | 309 | 1.37e-16 | 79.3 |
| MS.gene25988.t1 | MTR_6g453040 | 30.198 | 202 | 126 | 4 | 34 | 224 | 59 | 256 | 7.68e-16 | 77.0 |
| MS.gene25988.t1 | MTR_1g051165 | 28.309 | 272 | 155 | 10 | 41 | 295 | 20 | 268 | 1.38e-14 | 73.2 |
| MS.gene25988.t1 | MTR_4g058840 | 27.189 | 217 | 135 | 5 | 36 | 248 | 12 | 209 | 2.28e-14 | 72.4 |
| MS.gene25988.t1 | MTR_4g058820 | 27.189 | 217 | 135 | 5 | 36 | 248 | 12 | 209 | 2.28e-14 | 72.4 |
| MS.gene25988.t1 | MTR_4g058810 | 27.650 | 217 | 134 | 7 | 36 | 248 | 12 | 209 | 6.48e-14 | 71.2 |
| MS.gene25988.t1 | MTR_7g076660 | 27.027 | 296 | 147 | 10 | 40 | 292 | 10 | 279 | 9.30e-14 | 70.9 |
| MS.gene25988.t1 | MTR_7g076660 | 27.027 | 296 | 147 | 10 | 40 | 292 | 9 | 278 | 1.09e-13 | 70.9 |
| MS.gene25988.t1 | MTR_6g453040 | 29.474 | 190 | 119 | 4 | 32 | 210 | 57 | 242 | 6.86e-13 | 67.8 |
| MS.gene25988.t1 | MTR_8g031610 | 24.839 | 310 | 163 | 10 | 38 | 299 | 5 | 292 | 4.11e-12 | 66.2 |
| MS.gene25988.t1 | MTR_7g076655 | 25.597 | 293 | 155 | 9 | 40 | 292 | 9 | 278 | 8.23e-12 | 65.1 |
| MS.gene25988.t1 | MTR_4g052340 | 28.448 | 232 | 136 | 6 | 37 | 264 | 16 | 221 | 3.09e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25988.t1 | AT5G50130 | 70.482 | 332 | 94 | 3 | 1 | 330 | 1 | 330 | 8.13e-167 | 468 |
| MS.gene25988.t1 | AT5G50130 | 69.310 | 290 | 89 | 0 | 41 | 330 | 7 | 296 | 9.10e-147 | 416 |
| MS.gene25988.t1 | AT5G50130 | 69.072 | 291 | 89 | 1 | 41 | 330 | 7 | 297 | 1.75e-145 | 412 |
| MS.gene25988.t1 | AT5G50130 | 71.326 | 279 | 76 | 3 | 1 | 277 | 1 | 277 | 1.28e-139 | 398 |
| MS.gene25988.t1 | AT5G50130 | 71.071 | 280 | 76 | 4 | 1 | 277 | 1 | 278 | 3.68e-138 | 395 |
| MS.gene25988.t1 | AT5G50130 | 70.930 | 258 | 72 | 2 | 1 | 257 | 1 | 256 | 9.19e-130 | 371 |
| MS.gene25988.t1 | AT5G50130 | 70.656 | 259 | 72 | 3 | 1 | 257 | 1 | 257 | 3.08e-128 | 367 |
| MS.gene25988.t1 | AT5G50130 | 69.748 | 238 | 71 | 1 | 41 | 277 | 7 | 244 | 3.76e-118 | 343 |
| MS.gene25988.t1 | AT4G24050 | 52.012 | 323 | 150 | 2 | 1 | 321 | 1 | 320 | 1.08e-117 | 343 |
| MS.gene25988.t1 | AT5G50130 | 69.456 | 239 | 71 | 2 | 41 | 277 | 7 | 245 | 1.31e-116 | 338 |
| MS.gene25988.t1 | AT1G64590 | 54.799 | 323 | 141 | 4 | 1 | 321 | 1 | 320 | 7.22e-106 | 313 |
| MS.gene25988.t1 | AT4G24050 | 51.254 | 279 | 129 | 3 | 1 | 277 | 1 | 274 | 4.10e-96 | 286 |
| MS.gene25988.t1 | AT5G02540 | 50.476 | 315 | 152 | 2 | 8 | 322 | 7 | 317 | 3.53e-95 | 286 |
| MS.gene25988.t1 | AT2G37540 | 47.134 | 314 | 162 | 2 | 8 | 321 | 7 | 316 | 8.02e-95 | 284 |
| MS.gene25988.t1 | AT4G23420 | 45.307 | 309 | 166 | 1 | 7 | 315 | 2 | 307 | 1.97e-92 | 278 |
| MS.gene25988.t1 | AT4G23420 | 45.307 | 309 | 166 | 1 | 7 | 315 | 2 | 307 | 1.97e-92 | 278 |
| MS.gene25988.t1 | AT4G23420 | 45.847 | 301 | 160 | 1 | 15 | 315 | 27 | 324 | 4.44e-91 | 275 |
| MS.gene25988.t1 | AT4G23430 | 44.660 | 309 | 168 | 1 | 7 | 315 | 2 | 307 | 1.45e-90 | 273 |
| MS.gene25988.t1 | AT4G23430 | 44.984 | 309 | 165 | 3 | 7 | 315 | 2 | 305 | 3.04e-88 | 268 |
| MS.gene25988.t1 | AT4G11410 | 45.695 | 302 | 160 | 2 | 13 | 314 | 8 | 305 | 9.84e-88 | 266 |
| MS.gene25988.t1 | AT4G23430 | 42.071 | 309 | 166 | 2 | 7 | 315 | 2 | 297 | 1.67e-80 | 248 |
| MS.gene25988.t1 | AT4G23430 | 42.395 | 309 | 163 | 4 | 7 | 315 | 2 | 295 | 2.86e-78 | 242 |
| MS.gene25988.t1 | AT2G37540 | 48.750 | 240 | 120 | 1 | 8 | 247 | 7 | 243 | 2.00e-75 | 233 |
| MS.gene25988.t1 | AT4G23420 | 44.318 | 264 | 144 | 1 | 7 | 270 | 2 | 262 | 3.40e-73 | 227 |
| MS.gene25988.t1 | AT4G11410 | 46.341 | 246 | 129 | 1 | 13 | 258 | 8 | 250 | 8.90e-72 | 223 |
| MS.gene25988.t1 | AT4G23420 | 47.280 | 239 | 123 | 1 | 7 | 245 | 2 | 237 | 1.34e-71 | 223 |
| MS.gene25988.t1 | AT4G27760 | 32.154 | 311 | 177 | 9 | 34 | 321 | 52 | 351 | 1.54e-28 | 114 |
| MS.gene25988.t1 | AT4G09750 | 29.368 | 269 | 163 | 7 | 37 | 298 | 43 | 291 | 1.67e-28 | 112 |
| MS.gene25988.t1 | AT5G04070 | 30.945 | 307 | 180 | 11 | 41 | 327 | 62 | 356 | 1.71e-27 | 110 |
| MS.gene25988.t1 | AT5G53090 | 32.154 | 311 | 177 | 10 | 34 | 321 | 51 | 350 | 4.58e-27 | 109 |
| MS.gene25988.t1 | AT5G54190 | 26.837 | 313 | 191 | 11 | 41 | 321 | 96 | 402 | 1.25e-26 | 108 |
| MS.gene25988.t1 | AT4G27440 | 28.115 | 313 | 187 | 11 | 41 | 321 | 92 | 398 | 5.73e-26 | 107 |
| MS.gene25988.t1 | AT4G27440 | 28.115 | 313 | 187 | 11 | 41 | 321 | 92 | 398 | 5.73e-26 | 107 |
| MS.gene25988.t1 | AT5G15940 | 29.801 | 302 | 183 | 10 | 41 | 322 | 64 | 356 | 9.34e-26 | 106 |
| MS.gene25988.t1 | AT5G15940 | 29.801 | 302 | 183 | 10 | 41 | 322 | 64 | 356 | 9.34e-26 | 106 |
| MS.gene25988.t1 | AT5G15940 | 29.801 | 302 | 183 | 10 | 41 | 322 | 63 | 355 | 1.01e-25 | 105 |
| MS.gene25988.t1 | AT1G03630 | 29.412 | 323 | 173 | 13 | 39 | 321 | 91 | 398 | 3.00e-25 | 105 |
| MS.gene25988.t1 | AT1G03630 | 29.412 | 323 | 173 | 13 | 39 | 321 | 89 | 396 | 3.91e-25 | 104 |
| MS.gene25988.t1 | AT5G53100 | 30.519 | 308 | 179 | 9 | 38 | 321 | 45 | 341 | 1.81e-24 | 102 |
| MS.gene25988.t1 | AT5G15940 | 30.502 | 259 | 155 | 7 | 41 | 281 | 64 | 315 | 4.55e-23 | 97.8 |
| MS.gene25988.t1 | AT5G61830 | 23.549 | 293 | 171 | 7 | 40 | 297 | 39 | 313 | 2.35e-13 | 70.1 |
| MS.gene25988.t1 | AT5G61830 | 23.549 | 293 | 171 | 7 | 40 | 297 | 39 | 313 | 2.35e-13 | 70.1 |
| MS.gene25988.t1 | AT2G24190 | 25.000 | 308 | 158 | 13 | 36 | 292 | 8 | 293 | 3.77e-13 | 69.3 |
| MS.gene25988.t1 | AT2G24190 | 25.163 | 306 | 150 | 13 | 40 | 292 | 9 | 288 | 5.42e-13 | 68.9 |
| MS.gene25988.t1 | AT3G46170 | 25.862 | 290 | 177 | 11 | 17 | 294 | 11 | 274 | 6.15e-13 | 68.6 |
| MS.gene25988.t1 | AT2G17845 | 30.806 | 211 | 122 | 7 | 41 | 245 | 53 | 245 | 6.85e-13 | 68.9 |
| MS.gene25988.t1 | AT1G63380 | 29.358 | 218 | 118 | 8 | 39 | 245 | 26 | 218 | 5.75e-12 | 65.9 |
| MS.gene25988.t1 | AT1G63380 | 29.091 | 220 | 120 | 8 | 39 | 247 | 21 | 215 | 6.52e-12 | 65.5 |
| MS.gene25988.t1 | AT1G63380 | 29.091 | 220 | 120 | 8 | 39 | 247 | 23 | 217 | 6.70e-12 | 65.5 |
| MS.gene25988.t1 | AT1G63380 | 29.358 | 218 | 118 | 8 | 39 | 245 | 19 | 211 | 6.84e-12 | 65.5 |
| MS.gene25988.t1 | AT1G62610 | 28.505 | 214 | 125 | 7 | 39 | 245 | 23 | 215 | 1.90e-11 | 64.3 |
| MS.gene25988.t1 | AT1G62610 | 28.505 | 214 | 125 | 7 | 39 | 245 | 19 | 211 | 1.93e-11 | 64.3 |
| MS.gene25988.t1 | AT1G62610 | 28.505 | 214 | 125 | 7 | 39 | 245 | 18 | 210 | 1.98e-11 | 63.9 |
| MS.gene25988.t1 | AT1G62610 | 28.505 | 214 | 125 | 7 | 39 | 245 | 17 | 209 | 2.14e-11 | 63.9 |
| MS.gene25988.t1 | AT3G61220 | 26.471 | 306 | 148 | 14 | 40 | 293 | 16 | 296 | 2.26e-11 | 64.3 |
| MS.gene25988.t1 | AT3G61220 | 26.230 | 305 | 150 | 12 | 40 | 293 | 9 | 289 | 2.47e-11 | 63.9 |
| MS.gene25988.t1 | AT3G61220 | 26.471 | 306 | 148 | 14 | 40 | 293 | 40 | 320 | 3.25e-11 | 63.9 |
| MS.gene25988.t1 | AT3G03980 | 30.531 | 226 | 117 | 9 | 34 | 243 | 12 | 213 | 3.91e-11 | 63.2 |
Find 49 sgRNAs with CRISPR-Local
Find 125 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGCTAACAGAAATGTTAT+TGG | 0.226965 | 3.3:+65688065 | MS.gene25988:CDS |
| TCCTTGAATATCTGTCTTCT+TGG | 0.228861 | 3.3:-65688106 | None:intergenic |
| TACTTGGAAGGTGGGACTTC+TGG | 0.239228 | 3.3:+65687513 | MS.gene25988:intron |
| ATTGCAGGGCCTAGTGGTTT+TGG | 0.239997 | 3.3:+65686678 | MS.gene25988:CDS |
| TTCTTTGGCATGCAAAATAT+TGG | 0.244050 | 3.3:-65688329 | None:intergenic |
| TGCTTATGCTACATCAAAAT+TGG | 0.288348 | 3.3:+65688306 | MS.gene25988:CDS |
| GTATCTCAGTGTTGCCTTCA+TGG | 0.358808 | 3.3:-65686646 | None:intergenic |
| GAGTTGTCTAGCTATTTCTT+TGG | 0.372604 | 3.3:-65688344 | None:intergenic |
| AGATACTTAGCAGGAATTGC+AGG | 0.374017 | 3.3:+65686663 | MS.gene25988:CDS |
| GAAGGTGGGACTTCTGGTAT+TGG | 0.399438 | 3.3:+65687519 | MS.gene25988:intron |
| TCTCACAAGGGGTTAATAAC+AGG | 0.400619 | 3.3:+65688581 | MS.gene25988:CDS |
| AACAGAATAACCTCAGCATT+TGG | 0.410874 | 3.3:-65687648 | None:intergenic |
| TGGTATATTCTCTCAAGATT+TGG | 0.411347 | 3.3:+65687891 | MS.gene25988:CDS |
| TATCTCAGTGTTGCCTTCAT+GGG | 0.418442 | 3.3:-65686645 | None:intergenic |
| AATCAGAAGCTCAAAAGTTA+TGG | 0.420732 | 3.3:+65689120 | MS.gene25988:CDS |
| TTTCTTCTGTCATACATAGC+TGG | 0.434149 | 3.3:+65688142 | MS.gene25988:CDS |
| ACATTTGCCACAAATTACTT+AGG | 0.444013 | 3.3:+65687940 | MS.gene25988:CDS |
| AAATGTACCTAAGTAATTTG+TGG | 0.453221 | 3.3:-65687947 | None:intergenic |
| ATTCCTGTCTTTACAATACC+TGG | 0.456513 | 3.3:-65688551 | None:intergenic |
| GTGGAGTCGTTTGTGAATCA+AGG | 0.463999 | 3.3:-65689156 | None:intergenic |
| AACTTCATATTGTTGCTTGG+TGG | 0.468416 | 3.3:-65689175 | None:intergenic |
| TGTTTCAAAGACATACTCAA+TGG | 0.476615 | 3.3:+65688183 | MS.gene25988:CDS |
| ACTTACATTAGAATATTAAG+TGG | 0.495604 | 3.3:-65687738 | None:intergenic |
| TTCTTCTGTCATACATAGCT+GGG | 0.501675 | 3.3:+65688143 | MS.gene25988:CDS |
| AAATGCTGAGGTTATTCTGT+TGG | 0.509859 | 3.3:+65687650 | MS.gene25988:CDS |
| GGTGATTAGAGCGGTTAGAC+CGG | 0.516299 | 3.3:-65686754 | None:intergenic |
| CATCCAGGTATTGTAAAGAC+AGG | 0.525444 | 3.3:+65688548 | MS.gene25988:CDS |
| TCCAAGAAGACAGATATTCA+AGG | 0.529268 | 3.3:+65688105 | MS.gene25988:CDS |
| ACTATCAATGCAGTTCATCC+AGG | 0.547059 | 3.3:+65688533 | MS.gene25988:CDS |
| TGGTGCAAGGGACTTGAAGA+AGG | 0.555937 | 3.3:+65687590 | MS.gene25988:CDS |
| AGAGGAGTGAGAATTGTGAT+TGG | 0.559022 | 3.3:+65687570 | MS.gene25988:CDS |
| AGAAATAGCTAGACAACTCA+AGG | 0.563686 | 3.3:+65688348 | MS.gene25988:CDS |
| GAATTTGAGCCAAAACCACT+AGG | 0.563701 | 3.3:-65686687 | None:intergenic |
| GCAACACTGAGATACTTAGC+AGG | 0.577681 | 3.3:+65686654 | MS.gene25988:CDS |
| CATAGCTGGGTGAAGAGACA+TGG | 0.586615 | 3.3:+65688156 | MS.gene25988:CDS |
| TGCATCAACTGCATGTTATG+TGG | 0.598728 | 3.3:+65689013 | MS.gene25988:CDS |
| ATTAGAGCGGTTAGACCGGA+AGG | 0.601271 | 3.3:-65686750 | None:intergenic |
| GATACTTAGCAGGAATTGCA+GGG | 0.603209 | 3.3:+65686664 | MS.gene25988:CDS |
| GGTCTAACCGCTCTAATCAC+CGG | 0.603950 | 3.3:+65686756 | MS.gene25988:CDS |
| GCAGGAATTGCAGGGCCTAG+TGG | 0.613097 | 3.3:+65686672 | MS.gene25988:CDS |
| GTTACTGAAATCGACATCAC+AGG | 0.613835 | 3.3:+65688725 | MS.gene25988:CDS |
| TGAGAATTGTGATTGGTGCA+AGG | 0.621535 | 3.3:+65687577 | MS.gene25988:CDS |
| GAGAATTGTGATTGGTGCAA+GGG | 0.621877 | 3.3:+65687578 | MS.gene25988:CDS |
| GCTAGAGTGTTAGCAAAGAG+AGG | 0.622747 | 3.3:+65687552 | MS.gene25988:CDS |
| AGGAATTATTAAATCTCACA+AGG | 0.623928 | 3.3:+65688568 | MS.gene25988:CDS |
| AAAAGAGAGTCCAAATGCTG+AGG | 0.641600 | 3.3:+65687638 | MS.gene25988:CDS |
| GGAATTATTAAATCTCACAA+GGG | 0.654440 | 3.3:+65688569 | MS.gene25988:CDS |
| AGACTTACCGGTGATTAGAG+CGG | 0.666100 | 3.3:-65686763 | None:intergenic |
| GAATTATTAAATCTCACAAG+GGG | 0.680344 | 3.3:+65688570 | MS.gene25988:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATAAAATGAAAAAG+TGG | - | chr3.3:65687781-65687800 | None:intergenic | 10.0% |
| !! | TCATATTCATATATAATTAT+AGG | + | chr3.3:65688493-65688512 | MS.gene25988:intron | 10.0% |
| !! | TTAAATTTAAATACTCATAA+TGG | + | chr3.3:65688259-65688278 | MS.gene25988:intron | 10.0% |
| !! | ATTACATAGTAATTTACTAT+AGG | - | chr3.3:65688923-65688942 | None:intergenic | 15.0% |
| !! | ATTGATGTAAACATAAATAT+GGG | + | chr3.3:65688827-65688846 | MS.gene25988:intron | 15.0% |
| !! | AAAATTTAATTAGCAGAGAT+AGG | - | chr3.3:65687174-65687193 | None:intergenic | 20.0% |
| !! | ACTAAACAAACAAAAGAAAA+TGG | - | chr3.3:65687140-65687159 | None:intergenic | 20.0% |
| !! | ACTTACATTAGAATATTAAG+TGG | - | chr3.3:65687741-65687760 | None:intergenic | 20.0% |
| !! | ATATATCTCACAATTATATG+TGG | + | chr3.3:65688978-65688997 | MS.gene25988:intron | 20.0% |
| !! | ATGAATATGAATACTTTAGT+GGG | - | chr3.3:65688483-65688502 | None:intergenic | 20.0% |
| !! | ATTAGCATAGTGAAATAAAA+TGG | + | chr3.3:65687799-65687818 | MS.gene25988:intron | 20.0% |
| !! | CAACTTCATTAATTAATAGT+TGG | - | chr3.3:65687475-65687494 | None:intergenic | 20.0% |
| !! | GATTGATGTAAACATAAATA+TGG | + | chr3.3:65688826-65688845 | MS.gene25988:intron | 20.0% |
| !! | TATGAATATGAATACTTTAG+TGG | - | chr3.3:65688484-65688503 | None:intergenic | 20.0% |
| !! | TCTAATTCTTAATGCATATT+TGG | + | chr3.3:65687969-65687988 | MS.gene25988:intron | 20.0% |
| !! | TTCATATATAATTATAGGCA+AGG | + | chr3.3:65688498-65688517 | MS.gene25988:intron | 20.0% |
| !! | TTGATGTAAACATAAATATG+GGG | + | chr3.3:65688828-65688847 | MS.gene25988:intron | 20.0% |
| !!! | AGTATTTTTTTCATCATTCA+TGG | + | chr3.3:65687448-65687467 | MS.gene25988:intron | 20.0% |
| !!! | ATACAATACTCAAGTTTTTT+GGG | - | chr3.3:65687419-65687438 | None:intergenic | 20.0% |
| !!! | ATTTTATTGAATTGAATTGC+AGG | + | chr3.3:65688036-65688055 | MS.gene25988:intron | 20.0% |
| !!! | GTTAAATTTTGTTAAGCATA+GGG | + | chr3.3:65688765-65688784 | MS.gene25988:intron | 20.0% |
| !!! | TATACAATACTCAAGTTTTT+TGG | - | chr3.3:65687420-65687439 | None:intergenic | 20.0% |
| !!! | TGTTAAATTTTGTTAAGCAT+AGG | + | chr3.3:65688764-65688783 | MS.gene25988:intron | 20.0% |
| !!! | TTTTATGATATGTACACTAA+TGG | + | chr3.3:65687837-65687856 | MS.gene25988:intron | 20.0% |
| ! | AAATGTACCTAAGTAATTTG+TGG | - | chr3.3:65687950-65687969 | None:intergenic | 25.0% |
| ! | AATGAGATTATGAGTGTAAA+TGG | - | chr3.3:65687331-65687350 | None:intergenic | 25.0% |
| ! | ACATAGTAATTTACTATAGG+AGG | - | chr3.3:65688920-65688939 | None:intergenic | 25.0% |
| ! | AGGAATTATTAAATCTCACA+AGG | + | chr3.3:65688568-65688587 | MS.gene25988:CDS | 25.0% |
| ! | ATAGTACAATTACATTGTTG+TGG | + | chr3.3:65688876-65688895 | MS.gene25988:intron | 25.0% |
| ! | ATGAGATTATGAGTGTAAAT+GGG | - | chr3.3:65687330-65687349 | None:intergenic | 25.0% |
| ! | CATAGTAATTTACTATAGGA+GGG | - | chr3.3:65688919-65688938 | None:intergenic | 25.0% |
| ! | CTTTGATGCTATGAAAAATA+AGG | - | chr3.3:65688706-65688725 | None:intergenic | 25.0% |
| ! | GAATTATTAAATCTCACAAG+GGG | + | chr3.3:65688570-65688589 | MS.gene25988:CDS | 25.0% |
| ! | GGAATTATTAAATCTCACAA+GGG | + | chr3.3:65688569-65688588 | MS.gene25988:CDS | 25.0% |
| ! | TTTGCTAACAGAAATGTTAT+TGG | + | chr3.3:65688065-65688084 | MS.gene25988:CDS | 25.0% |
| !! | AAATTTTACAGAAACAATGC+TGG | + | chr3.3:65687871-65687890 | MS.gene25988:intron | 25.0% |
| !!! | ATCGTTGTTGATTTTTTACT+TGG | + | chr3.3:65687497-65687516 | MS.gene25988:intron | 25.0% |
| !!! | GTGTGTATGAGATTTTTTTT+TGG | - | chr3.3:65686854-65686873 | None:intergenic | 25.0% |
| !!! | TTGTTGATTTTTTACTTGGA+AGG | + | chr3.3:65687501-65687520 | MS.gene25988:intron | 25.0% |
| AATCAGAAGCTCAAAAGTTA+TGG | + | chr3.3:65689120-65689139 | MS.gene25988:CDS | 30.0% | |
| ACAAAACTTTCTATGCATGT+TGG | + | chr3.3:65688456-65688475 | MS.gene25988:intron | 30.0% | |
| ACATTTGCCACAAATTACTT+AGG | + | chr3.3:65687940-65687959 | MS.gene25988:CDS | 30.0% | |
| ATCATAGTGAGTTCATTTAG+TGG | + | chr3.3:65687993-65688012 | MS.gene25988:intron | 30.0% | |
| GATGATCAATAAAATGAGCA+AGG | - | chr3.3:65687372-65687391 | None:intergenic | 30.0% | |
| TAAACCATACATAACCAACT+TGG | - | chr3.3:65686901-65686920 | None:intergenic | 30.0% | |
| TATCTCACAATTATATGTGG+TGG | + | chr3.3:65688981-65689000 | MS.gene25988:intron | 30.0% | |
| TCATAGTGAGTTCATTTAGT+GGG | + | chr3.3:65687994-65688013 | MS.gene25988:intron | 30.0% | |
| TGAAAAATAAGGAATCTGCA+TGG | - | chr3.3:65688695-65688714 | None:intergenic | 30.0% | |
| TGAGTCATTCTTTCTCATAA+AGG | + | chr3.3:65686959-65686978 | MS.gene25988:intron | 30.0% | |
| TGCTTATGCTACATCAAAAT+TGG | + | chr3.3:65688306-65688325 | MS.gene25988:CDS | 30.0% | |
| TGGTATATTCTCTCAAGATT+TGG | + | chr3.3:65687891-65687910 | MS.gene25988:CDS | 30.0% | |
| TGTTTCAAAGACATACTCAA+TGG | + | chr3.3:65688183-65688202 | MS.gene25988:CDS | 30.0% | |
| TTCTTTGGCATGCAAAATAT+TGG | - | chr3.3:65688332-65688351 | None:intergenic | 30.0% | |
| ! | AAATGAGCAAGGTGTATTTT+TGG | - | chr3.3:65687361-65687380 | None:intergenic | 30.0% |
| ! | AATGAGCAAGGTGTATTTTT+GGG | - | chr3.3:65687360-65687379 | None:intergenic | 30.0% |
| ! | TTACTTGTTAAGCTTTCACT+TGG | + | chr3.3:65687208-65687227 | MS.gene25988:intron | 30.0% |
| !!! | TGATTTTTTACTTGGAAGGT+GGG | + | chr3.3:65687505-65687524 | MS.gene25988:intron | 30.0% |
| !!! | TTGATTTTTTACTTGGAAGG+TGG | + | chr3.3:65687504-65687523 | MS.gene25988:intron | 30.0% |
| AAAGTCATTGCAACTTTGCA+GGG | - | chr3.3:65688798-65688817 | None:intergenic | 35.0% | |
| AAATGCTGAGGTTATTCTGT+TGG | + | chr3.3:65687650-65687669 | MS.gene25988:CDS | 35.0% | |
| AACAGAATAACCTCAGCATT+TGG | - | chr3.3:65687651-65687670 | None:intergenic | 35.0% | |
| AGAAATAGCTAGACAACTCA+AGG | + | chr3.3:65688348-65688367 | MS.gene25988:CDS | 35.0% | |
| ATCACATTGCTACAAGAAAG+TGG | + | chr3.3:65688431-65688450 | MS.gene25988:intron | 35.0% | |
| ATTCCTGTCTTTACAATACC+TGG | - | chr3.3:65688554-65688573 | None:intergenic | 35.0% | |
| CTGTGCTAAATTGTAGTACT+TGG | + | chr3.3:65687004-65687023 | MS.gene25988:intron | 35.0% | |
| CTTTGAGTCCAAAAACAGAA+GGG | + | chr3.3:65689036-65689055 | MS.gene25988:CDS | 35.0% | |
| GAGACCAAAATCCAACAAAA+AGG | - | chr3.3:65687297-65687316 | None:intergenic | 35.0% | |
| GTTGCAATGACTTTGATTGA+TGG | + | chr3.3:65688804-65688823 | MS.gene25988:intron | 35.0% | |
| TATGCGTATATAGTTGCTTG+AGG | - | chr3.3:65688859-65688878 | None:intergenic | 35.0% | |
| TCCAAGAAGACAGATATTCA+AGG | + | chr3.3:65688105-65688124 | MS.gene25988:CDS | 35.0% | |
| TCCTTGAATATCTGTCTTCT+TGG | - | chr3.3:65688109-65688128 | None:intergenic | 35.0% | |
| TTCACTTGGCAAAAATTGCA+TGG | + | chr3.3:65687222-65687241 | MS.gene25988:intron | 35.0% | |
| TTCTTCTGTCATACATAGCT+GGG | + | chr3.3:65688143-65688162 | MS.gene25988:CDS | 35.0% | |
| TTTCTTCTGTCATACATAGC+TGG | + | chr3.3:65688142-65688161 | MS.gene25988:CDS | 35.0% | |
| TTTGAGTCCAAAAACAGAAG+GGG | + | chr3.3:65689037-65689056 | MS.gene25988:CDS | 35.0% | |
| ! | AATGGTTTTTGCAGCTACAA+TGG | + | chr3.3:65688277-65688296 | MS.gene25988:intron | 35.0% |
| ! | CATGCCTTTTTGTTGGATTT+TGG | + | chr3.3:65687290-65687309 | MS.gene25988:intron | 35.0% |
| ! | CTATACACATGCCTTTTTGT+TGG | + | chr3.3:65687283-65687302 | MS.gene25988:intron | 35.0% |
| ! | TGTTCTTCTTTTCTTCCTTC+CGG | + | chr3.3:65686735-65686754 | MS.gene25988:CDS | 35.0% |
| !! | ATGAGCAAGGTGTATTTTTG+GGG | - | chr3.3:65687359-65687378 | None:intergenic | 35.0% |
| !! | GAGTTGTCTAGCTATTTCTT+TGG | - | chr3.3:65688347-65688366 | None:intergenic | 35.0% |
| !! | TTGACCAAGTTGGTTATGTA+TGG | + | chr3.3:65686894-65686913 | MS.gene25988:intron | 35.0% |
| AAAAGAGAGTCCAAATGCTG+AGG | + | chr3.3:65687638-65687657 | MS.gene25988:CDS | 40.0% | |
| AATTATATGTGGTGGTCCTC+AGG | + | chr3.3:65688989-65689008 | MS.gene25988:intron | 40.0% | |
| ACTATCAATGCAGTTCATCC+AGG | + | chr3.3:65688533-65688552 | MS.gene25988:CDS | 40.0% | |
| ACTGAATTCTCAAGGTCAAG+AGG | - | chr3.3:65686798-65686817 | None:intergenic | 40.0% | |
| AGAGGAGTGAGAATTGTGAT+TGG | + | chr3.3:65687570-65687589 | MS.gene25988:CDS | 40.0% | |
| AGATACTTAGCAGGAATTGC+AGG | + | chr3.3:65686663-65686682 | MS.gene25988:CDS | 40.0% | |
| ATTATATGTGGTGGTCCTCA+GGG | + | chr3.3:65688990-65689009 | MS.gene25988:intron | 40.0% | |
| CAAAGTCATTGCAACTTTGC+AGG | - | chr3.3:65688799-65688818 | None:intergenic | 40.0% | |
| GAATTTGAGCCAAAACCACT+AGG | - | chr3.3:65686690-65686709 | None:intergenic | 40.0% | |
| GAGAATTGTGATTGGTGCAA+GGG | + | chr3.3:65687578-65687597 | MS.gene25988:CDS | 40.0% | |
| GATACTTAGCAGGAATTGCA+GGG | + | chr3.3:65686664-65686683 | MS.gene25988:CDS | 40.0% | |
| GTTACTGAAATCGACATCAC+AGG | + | chr3.3:65688725-65688744 | MS.gene25988:CDS | 40.0% | |
| TCTCACAAGGGGTTAATAAC+AGG | + | chr3.3:65688581-65688600 | MS.gene25988:CDS | 40.0% | |
| TGAGAATTGTGATTGGTGCA+AGG | + | chr3.3:65687577-65687596 | MS.gene25988:CDS | 40.0% | |
| TGCATCAACTGCATGTTATG+TGG | + | chr3.3:65689013-65689032 | MS.gene25988:CDS | 40.0% | |
| TGTATATCTGTGCACAACTG+CGG | - | chr3.3:65686823-65686842 | None:intergenic | 40.0% | |
| ! | CATCCAGGTATTGTAAAGAC+AGG | + | chr3.3:65688548-65688567 | MS.gene25988:CDS | 40.0% |
| ! | GCTTTGAGTCCAAAAACAGA+AGG | + | chr3.3:65689035-65689054 | MS.gene25988:CDS | 40.0% |
| ACACGCTTTCTTGACCAAGT+TGG | + | chr3.3:65686884-65686903 | MS.gene25988:intron | 45.0% | |
| AGACTTACCGGTGATTAGAG+CGG | - | chr3.3:65686766-65686785 | None:intergenic | 45.0% | |
| ATTCTCAAGGTCAAGAGGAC+TGG | - | chr3.3:65686793-65686812 | None:intergenic | 45.0% | |
| CAAAAACAGAAGGGGTGAGT+GGG | + | chr3.3:65689045-65689064 | MS.gene25988:CDS | 45.0% | |
| CATTGCAACTTTGCAGGGTT+TGG | - | chr3.3:65688793-65688812 | None:intergenic | 45.0% | |
| CTGAAATCGACATCACAGGT+TGG | + | chr3.3:65688729-65688748 | MS.gene25988:intron | 45.0% | |
| GCAACACTGAGATACTTAGC+AGG | + | chr3.3:65686654-65686673 | MS.gene25988:CDS | 45.0% | |
| GTGGAGTCGTTTGTGAATCA+AGG | - | chr3.3:65689159-65689178 | None:intergenic | 45.0% | |
| ! | AGGACTGGTATGAGACTTAC+CGG | - | chr3.3:65686778-65686797 | None:intergenic | 45.0% |
| ! | GCTAGAGTGTTAGCAAAGAG+AGG | + | chr3.3:65687552-65687571 | MS.gene25988:CDS | 45.0% |
| !!! | ATTTCTATTTTTTTTTTTTT+TGG | + | chr3.3:65687079-65687098 | MS.gene25988:intron | 5.0% |
| ATTAGAGCGGTTAGACCGGA+AGG | - | chr3.3:65686753-65686772 | None:intergenic | 50.0% | |
| CATAGCTGGGTGAAGAGACA+TGG | + | chr3.3:65688156-65688175 | MS.gene25988:CDS | 50.0% | |
| CCAAAAACAGAAGGGGTGAG+TGG | + | chr3.3:65689044-65689063 | MS.gene25988:CDS | 50.0% | |
| CTGCGGAGACTGAATTCTCA+AGG | - | chr3.3:65686806-65686825 | None:intergenic | 50.0% | |
| GAAGGTGGGACTTCTGGTAT+TGG | + | chr3.3:65687519-65687538 | MS.gene25988:intron | 50.0% | |
| GGTCTAACCGCTCTAATCAC+CGG | + | chr3.3:65686756-65686775 | MS.gene25988:CDS | 50.0% | |
| GGTGATTAGAGCGGTTAGAC+CGG | - | chr3.3:65686757-65686776 | None:intergenic | 50.0% | |
| TACTTGGAAGGTGGGACTTC+TGG | + | chr3.3:65687513-65687532 | MS.gene25988:intron | 50.0% | |
| TGGTGCAAGGGACTTGAAGA+AGG | + | chr3.3:65687590-65687609 | MS.gene25988:CDS | 50.0% | |
| ! | ATTGCAGGGCCTAGTGGTTT+TGG | + | chr3.3:65686678-65686697 | MS.gene25988:CDS | 50.0% |
| ! | CCACTCACCCCTTCTGTTTT+TGG | - | chr3.3:65689047-65689066 | None:intergenic | 50.0% |
| GACGTGAGAGTGAGCAAGCA+TGG | + | chr3.3:65686981-65687000 | MS.gene25988:intron | 55.0% | |
| ! | CATGCAGTTGATGCACCCTG+AGG | - | chr3.3:65689008-65689027 | None:intergenic | 55.0% |
| GCAGGAATTGCAGGGCCTAG+TGG | + | chr3.3:65686672-65686691 | MS.gene25988:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 65686648 | 65689193 | 65686648 | ID=MS.gene25988 |
| chr3.3 | mRNA | 65686648 | 65689193 | 65686648 | ID=MS.gene25988.t1;Parent=MS.gene25988 |
| chr3.3 | exon | 65686648 | 65686777 | 65686648 | ID=MS.gene25988.t1.exon1;Parent=MS.gene25988.t1 |
| chr3.3 | CDS | 65686648 | 65686777 | 65686648 | ID=cds.MS.gene25988.t1;Parent=MS.gene25988.t1 |
| chr3.3 | exon | 65687523 | 65687754 | 65687523 | ID=MS.gene25988.t1.exon2;Parent=MS.gene25988.t1 |
| chr3.3 | CDS | 65687523 | 65687754 | 65687523 | ID=cds.MS.gene25988.t1;Parent=MS.gene25988.t1 |
| chr3.3 | exon | 65687882 | 65687961 | 65687882 | ID=MS.gene25988.t1.exon3;Parent=MS.gene25988.t1 |
| chr3.3 | CDS | 65687882 | 65687961 | 65687882 | ID=cds.MS.gene25988.t1;Parent=MS.gene25988.t1 |
| chr3.3 | exon | 65688058 | 65688211 | 65688058 | ID=MS.gene25988.t1.exon4;Parent=MS.gene25988.t1 |
| chr3.3 | CDS | 65688058 | 65688211 | 65688058 | ID=cds.MS.gene25988.t1;Parent=MS.gene25988.t1 |
| chr3.3 | exon | 65688291 | 65688369 | 65688291 | ID=MS.gene25988.t1.exon5;Parent=MS.gene25988.t1 |
| chr3.3 | CDS | 65688291 | 65688369 | 65688291 | ID=cds.MS.gene25988.t1;Parent=MS.gene25988.t1 |
| chr3.3 | exon | 65688515 | 65688602 | 65688515 | ID=MS.gene25988.t1.exon6;Parent=MS.gene25988.t1 |
| chr3.3 | CDS | 65688515 | 65688602 | 65688515 | ID=cds.MS.gene25988.t1;Parent=MS.gene25988.t1 |
| chr3.3 | exon | 65688700 | 65688746 | 65688700 | ID=MS.gene25988.t1.exon7;Parent=MS.gene25988.t1 |
| chr3.3 | CDS | 65688700 | 65688746 | 65688700 | ID=cds.MS.gene25988.t1;Parent=MS.gene25988.t1 |
| chr3.3 | exon | 65689011 | 65689193 | 65689011 | ID=MS.gene25988.t1.exon8;Parent=MS.gene25988.t1 |
| chr3.3 | CDS | 65689011 | 65689193 | 65689011 | ID=cds.MS.gene25988.t1;Parent=MS.gene25988.t1 |
| Gene Sequence |
| Protein sequence |
