Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36445.t1 | RHN62821.1 | 98.3 | 531 | 9 | 0 | 1 | 531 | 32 | 562 | 5.7e-309 | 1069.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36445.t1 | Q93ZA3 | 63.4 | 530 | 184 | 6 | 1 | 525 | 6 | 530 | 6.8e-194 | 678.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36445.t1 | A0A072UQL2 | 98.3 | 531 | 9 | 0 | 1 | 531 | 6 | 536 | 4.1e-309 | 1069.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049227 | MS.gene36445 | 0.839523 | 1.51E-57 | -1.69E-46 |
| MS.gene049350 | MS.gene36445 | 0.806598 | 7.61E-50 | -1.69E-46 |
| MS.gene051279 | MS.gene36445 | 0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene052016 | MS.gene36445 | 0.808382 | 3.18E-50 | -1.69E-46 |
| MS.gene052463 | MS.gene36445 | 0.807574 | 4.73E-50 | -1.69E-46 |
| MS.gene056677 | MS.gene36445 | 0.804921 | 1.71E-49 | -1.69E-46 |
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36445.t1 | MTR_4g094520 | 98.305 | 531 | 9 | 0 | 1 | 531 | 6 | 536 | 0.0 | 1085 |
| MS.gene36445.t1 | MTR_2g031390 | 70.755 | 530 | 154 | 1 | 1 | 529 | 2 | 531 | 0.0 | 774 |
| MS.gene36445.t1 | MTR_4g094518 | 70.079 | 508 | 145 | 2 | 26 | 529 | 28 | 532 | 0.0 | 709 |
| MS.gene36445.t1 | MTR_3g009820 | 50.758 | 528 | 249 | 8 | 5 | 527 | 1 | 522 | 0.0 | 541 |
| MS.gene36445.t1 | MTR_3g009760 | 50.758 | 528 | 249 | 8 | 5 | 527 | 1 | 522 | 0.0 | 539 |
| MS.gene36445.t1 | MTR_4g094488 | 52.328 | 537 | 239 | 9 | 4 | 525 | 1 | 535 | 0.0 | 537 |
| MS.gene36445.t1 | MTR_4g094478 | 51.955 | 537 | 243 | 7 | 4 | 527 | 1 | 535 | 0.0 | 536 |
| MS.gene36445.t1 | MTR_4g094492 | 50.377 | 530 | 253 | 6 | 5 | 527 | 10 | 536 | 0.0 | 536 |
| MS.gene36445.t1 | MTR_2g031590 | 49.331 | 523 | 257 | 4 | 12 | 528 | 13 | 533 | 0.0 | 534 |
| MS.gene36445.t1 | MTR_4g094498 | 49.442 | 538 | 257 | 5 | 1 | 527 | 1 | 534 | 0.0 | 528 |
| MS.gene36445.t1 | MTR_3g009880 | 50.760 | 526 | 250 | 7 | 5 | 527 | 1 | 520 | 0.0 | 528 |
| MS.gene36445.t1 | MTR_2g031560 | 48.000 | 525 | 267 | 5 | 7 | 527 | 1 | 523 | 0.0 | 527 |
| MS.gene36445.t1 | MTR_4g094480 | 50.379 | 528 | 253 | 6 | 4 | 525 | 9 | 533 | 0.0 | 526 |
| MS.gene36445.t1 | MTR_2g031420 | 52.953 | 508 | 233 | 5 | 21 | 527 | 25 | 527 | 0.0 | 524 |
| MS.gene36445.t1 | MTR_4g094495 | 50.095 | 529 | 252 | 7 | 7 | 525 | 12 | 538 | 1.85e-180 | 518 |
| MS.gene36445.t1 | MTR_2g031460 | 49.713 | 523 | 255 | 6 | 8 | 527 | 10 | 527 | 2.65e-178 | 513 |
| MS.gene36445.t1 | MTR_4g091150 | 51.670 | 509 | 233 | 8 | 27 | 527 | 37 | 540 | 6.14e-174 | 502 |
| MS.gene36445.t1 | MTR_4g094515 | 49.811 | 530 | 256 | 4 | 7 | 528 | 624 | 1151 | 1.15e-172 | 518 |
| MS.gene36445.t1 | MTR_4g094515 | 47.901 | 524 | 259 | 6 | 13 | 528 | 24 | 541 | 3.06e-155 | 473 |
| MS.gene36445.t1 | MTR_4g094418 | 54.462 | 437 | 188 | 6 | 100 | 527 | 1 | 435 | 2.09e-171 | 498 |
| MS.gene36445.t1 | MTR_2g031510 | 49.020 | 510 | 252 | 5 | 24 | 528 | 35 | 541 | 1.33e-169 | 491 |
| MS.gene36445.t1 | MTR_4g091200 | 47.180 | 532 | 263 | 8 | 1 | 525 | 4 | 524 | 5.76e-167 | 483 |
| MS.gene36445.t1 | MTR_2g031490 | 48.000 | 525 | 260 | 6 | 14 | 528 | 18 | 539 | 1.34e-166 | 483 |
| MS.gene36445.t1 | MTR_6g017205 | 47.810 | 525 | 258 | 8 | 7 | 525 | 10 | 524 | 9.40e-166 | 481 |
| MS.gene36445.t1 | MTR_4g091190 | 46.604 | 530 | 271 | 7 | 1 | 525 | 4 | 526 | 1.31e-164 | 478 |
| MS.gene36445.t1 | MTR_4g057990 | 46.780 | 528 | 270 | 7 | 1 | 525 | 1 | 520 | 1.98e-162 | 472 |
| MS.gene36445.t1 | MTR_4g088355 | 48.413 | 504 | 248 | 7 | 29 | 525 | 33 | 531 | 2.92e-162 | 472 |
| MS.gene36445.t1 | MTR_4g091170 | 47.149 | 456 | 214 | 7 | 75 | 525 | 107 | 540 | 1.61e-149 | 441 |
| MS.gene36445.t1 | MTR_2g023590 | 47.097 | 465 | 239 | 5 | 64 | 525 | 4 | 464 | 7.58e-148 | 433 |
| MS.gene36445.t1 | MTR_1g076830 | 39.238 | 525 | 303 | 9 | 15 | 530 | 21 | 538 | 6.75e-120 | 364 |
| MS.gene36445.t1 | MTR_2g031600 | 53.648 | 233 | 106 | 1 | 12 | 244 | 14 | 244 | 1.21e-79 | 255 |
| MS.gene36445.t1 | MTR_2g031600 | 46.914 | 162 | 85 | 1 | 368 | 528 | 240 | 401 | 1.11e-46 | 168 |
| MS.gene36445.t1 | MTR_3g009850 | 51.754 | 228 | 108 | 2 | 302 | 527 | 1 | 228 | 4.23e-79 | 248 |
| MS.gene36445.t1 | MTR_2g084370 | 41.441 | 111 | 43 | 2 | 126 | 236 | 1 | 89 | 4.82e-26 | 102 |
| MS.gene36445.t1 | MTR_8g062280 | 45.361 | 97 | 25 | 1 | 428 | 524 | 4 | 72 | 8.69e-22 | 89.7 |
| MS.gene36445.t1 | MTR_2g084405 | 50.633 | 79 | 39 | 0 | 126 | 204 | 1 | 79 | 3.00e-19 | 83.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene36445.t1 | AT1G30760 | 64.554 | 505 | 172 | 3 | 24 | 525 | 48 | 548 | 0.0 | 664 |
| MS.gene36445.t1 | AT1G30760 | 64.554 | 505 | 172 | 3 | 24 | 525 | 30 | 530 | 0.0 | 664 |
| MS.gene36445.t1 | AT2G34790 | 61.950 | 523 | 191 | 4 | 6 | 525 | 11 | 528 | 0.0 | 660 |
| MS.gene36445.t1 | AT5G44400 | 60.829 | 531 | 198 | 7 | 4 | 527 | 9 | 536 | 0.0 | 653 |
| MS.gene36445.t1 | AT5G44390 | 56.262 | 535 | 223 | 7 | 3 | 529 | 11 | 542 | 0.0 | 603 |
| MS.gene36445.t1 | AT5G44380 | 57.171 | 516 | 214 | 6 | 18 | 528 | 67 | 580 | 0.0 | 576 |
| MS.gene36445.t1 | AT5G44380 | 57.171 | 516 | 214 | 6 | 18 | 528 | 27 | 540 | 0.0 | 575 |
| MS.gene36445.t1 | AT1G30700 | 49.714 | 525 | 258 | 4 | 7 | 528 | 6 | 527 | 7.38e-176 | 506 |
| MS.gene36445.t1 | AT5G44360 | 48.308 | 532 | 260 | 9 | 5 | 529 | 9 | 532 | 2.78e-169 | 489 |
| MS.gene36445.t1 | AT5G44360 | 48.308 | 532 | 260 | 9 | 5 | 529 | 25 | 548 | 4.34e-169 | 490 |
| MS.gene36445.t1 | AT1G26380 | 48.674 | 528 | 259 | 7 | 6 | 527 | 4 | 525 | 1.87e-168 | 488 |
| MS.gene36445.t1 | AT4G20860 | 48.833 | 514 | 249 | 8 | 22 | 527 | 22 | 529 | 3.17e-168 | 487 |
| MS.gene36445.t1 | AT4G20800 | 49.004 | 502 | 250 | 4 | 27 | 526 | 27 | 524 | 6.12e-166 | 481 |
| MS.gene36445.t1 | AT4G20820 | 47.358 | 530 | 262 | 8 | 3 | 527 | 9 | 526 | 4.49e-165 | 479 |
| MS.gene36445.t1 | AT1G26400 | 47.637 | 529 | 268 | 6 | 1 | 526 | 1 | 523 | 1.98e-164 | 477 |
| MS.gene36445.t1 | AT1G26420 | 47.810 | 525 | 261 | 6 | 14 | 529 | 7 | 527 | 5.89e-164 | 476 |
| MS.gene36445.t1 | AT1G11770 | 46.916 | 535 | 268 | 7 | 5 | 528 | 1 | 530 | 4.51e-163 | 474 |
| MS.gene36445.t1 | AT1G26390 | 48.810 | 504 | 252 | 4 | 29 | 529 | 29 | 529 | 4.32e-162 | 471 |
| MS.gene36445.t1 | AT1G26410 | 47.714 | 503 | 257 | 5 | 29 | 529 | 53 | 551 | 6.50e-161 | 469 |
| MS.gene36445.t1 | AT1G34575 | 44.991 | 529 | 265 | 10 | 7 | 525 | 10 | 522 | 7.69e-160 | 465 |
| MS.gene36445.t1 | AT1G30710 | 45.437 | 526 | 267 | 9 | 12 | 527 | 13 | 528 | 4.48e-159 | 464 |
| MS.gene36445.t1 | AT1G30730 | 45.920 | 527 | 276 | 6 | 4 | 525 | 1 | 523 | 4.72e-159 | 463 |
| MS.gene36445.t1 | AT4G20840 | 48.126 | 507 | 254 | 6 | 25 | 527 | 34 | 535 | 1.82e-158 | 462 |
| MS.gene36445.t1 | AT5G44440 | 45.113 | 532 | 278 | 7 | 1 | 525 | 3 | 527 | 5.39e-156 | 456 |
| MS.gene36445.t1 | AT1G30720 | 46.589 | 513 | 267 | 5 | 16 | 525 | 16 | 524 | 7.70e-156 | 455 |
| MS.gene36445.t1 | AT5G44440 | 45.714 | 525 | 267 | 8 | 12 | 525 | 80 | 597 | 6.41e-155 | 456 |
| MS.gene36445.t1 | AT5G44410 | 46.875 | 544 | 253 | 12 | 1 | 525 | 1 | 527 | 1.48e-150 | 442 |
| MS.gene36445.t1 | AT1G30740 | 47.228 | 523 | 259 | 8 | 15 | 528 | 18 | 532 | 4.84e-150 | 441 |
| MS.gene36445.t1 | AT1G30740 | 47.228 | 523 | 259 | 8 | 15 | 528 | 15 | 529 | 4.84e-150 | 441 |
| MS.gene36445.t1 | AT4G20830 | 47.255 | 510 | 260 | 6 | 22 | 527 | 32 | 536 | 1.67e-149 | 439 |
| MS.gene36445.t1 | AT1G01980 | 46.899 | 516 | 260 | 8 | 22 | 528 | 25 | 535 | 5.99e-149 | 438 |
| MS.gene36445.t1 | AT4G20830 | 47.255 | 510 | 260 | 6 | 22 | 527 | 32 | 536 | 7.80e-149 | 439 |
| MS.gene36445.t1 | AT2G34810 | 44.487 | 517 | 271 | 8 | 22 | 527 | 28 | 539 | 6.50e-143 | 422 |
Find 115 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGGGAGAAGACCTATTT+TGG | 0.145172 | 4.1:-18790496 | MS.gene36445:CDS |
| TTGCTAACTCTTGGGGTTAT+AGG | 0.226534 | 4.1:-18789683 | MS.gene36445:CDS |
| GATTGAAGTGTAGGACTTAT+TGG | 0.231036 | 4.1:+18790997 | None:intergenic |
| TACAAAATTCAGTACTTATC+TGG | 0.232561 | 4.1:-18789867 | MS.gene36445:CDS |
| AGGGAATTGAGGGAAGTTTC+TGG | 0.233163 | 4.1:+18790005 | None:intergenic |
| GCAGGCCTTTGTACATCTTT+AGG | 0.242864 | 4.1:-18790641 | MS.gene36445:CDS |
| TCTTACCAAGCTCTGTTTCT+AGG | 0.266967 | 4.1:-18790236 | MS.gene36445:CDS |
| TATAGATTGAAGAGGGAAAT+TGG | 0.267535 | 4.1:+18791026 | None:intergenic |
| TTTCTTGTTAAACCCAATTC+AGG | 0.270282 | 4.1:+18790173 | None:intergenic |
| TTTCCCTGGAGCAGAACTTC+TGG | 0.282559 | 4.1:+18790083 | None:intergenic |
| TTGATCCATCTAATTTCTTT+AGG | 0.288821 | 4.1:-18789614 | MS.gene36445:CDS |
| GTCTTTCTCTTGCTAACTCT+TGG | 0.294277 | 4.1:-18789692 | MS.gene36445:CDS |
| AATTATAGAGATTTGGATAT+AGG | 0.299944 | 4.1:-18789738 | MS.gene36445:CDS |
| TAGGGATTCCATATCATTAA+AGG | 0.306572 | 4.1:+18789954 | None:intergenic |
| ATGATGGTCCTTTAATGATA+TGG | 0.309466 | 4.1:-18789962 | MS.gene36445:CDS |
| GCTAAAATCGTTAATGCTAA+TGG | 0.309493 | 4.1:-18790539 | MS.gene36445:CDS |
| CCAGGCAATGGTAGTGTTCC+TGG | 0.320965 | 4.1:-18790278 | MS.gene36445:CDS |
| TCTTTCTCTTGCTAACTCTT+GGG | 0.323097 | 4.1:-18789691 | MS.gene36445:CDS |
| CTATGTGAATTATAGAGATT+TGG | 0.331419 | 4.1:-18789745 | MS.gene36445:CDS |
| TTTAACAAGAAAGGATTGTT+TGG | 0.345762 | 4.1:-18790162 | MS.gene36445:CDS |
| ACTTCTGGAGGTGTTGTATT+GGG | 0.356109 | 4.1:+18790098 | None:intergenic |
| GATTGATGGAGAAAAGAATA+TGG | 0.359004 | 4.1:-18789841 | MS.gene36445:CDS |
| GGAGGCGGAGGAGGCAGCTT+CGG | 0.369626 | 4.1:-18790464 | MS.gene36445:CDS |
| ATTGAAGAGGGAAATTGGTT+TGG | 0.371420 | 4.1:+18791031 | None:intergenic |
| GTGAATATGAAATCTGGTTT+TGG | 0.372628 | 4.1:+18790929 | None:intergenic |
| GAAACAAGCTTCTTTATAGA+TGG | 0.373043 | 4.1:-18790355 | MS.gene36445:CDS |
| TCTCTGGTGGAAGATCAAAT+TGG | 0.387633 | 4.1:-18790435 | MS.gene36445:CDS |
| ATTATAGAGATTTGGATATA+GGG | 0.388143 | 4.1:-18789737 | MS.gene36445:CDS |
| TGAATTGGGTTTAACAAGAA+AGG | 0.388314 | 4.1:-18790171 | MS.gene36445:CDS |
| GAATTTGAGCATGAAGTGAT+AGG | 0.400466 | 4.1:+18791053 | None:intergenic |
| ACACTTTCTTACTTACCAAT+TGG | 0.404020 | 4.1:+18789567 | None:intergenic |
| CTCATTACCGGAGGTGCTTA+CGG | 0.407070 | 4.1:-18790608 | MS.gene36445:CDS |
| AGGATTGTTTGGAAACTAGT+TGG | 0.409589 | 4.1:-18790151 | MS.gene36445:CDS |
| TACTTATCTGGATGGATTGA+TGG | 0.410447 | 4.1:-18789855 | MS.gene36445:CDS |
| GAAAACTCTGCTTCATAACT+TGG | 0.419933 | 4.1:+18790195 | None:intergenic |
| AACTTCTGGAGGTGTTGTAT+TGG | 0.421717 | 4.1:+18790097 | None:intergenic |
| TCAGTTCATGGCTTCCCTGC+AGG | 0.425476 | 4.1:-18790659 | MS.gene36445:CDS |
| GGTTCTATGATGAGAAAGTA+TGG | 0.433505 | 4.1:-18790587 | MS.gene36445:CDS |
| GGTATCGGTGGCCTCATTAC+CGG | 0.435936 | 4.1:-18790620 | MS.gene36445:CDS |
| ATTCAAGTGGGTGCAACTAT+TGG | 0.445069 | 4.1:-18790713 | MS.gene36445:CDS |
| CCTACTCATCATTCCTCCAT+AGG | 0.458631 | 4.1:+18789935 | None:intergenic |
| CTTTCTCTTGCTAACTCTTG+GGG | 0.458680 | 4.1:-18789690 | MS.gene36445:CDS |
| CTCCTCTTATTGCCCAAAAT+AGG | 0.459368 | 4.1:+18790483 | None:intergenic |
| CTGAAGGCAATAAATACCTT+AGG | 0.460319 | 4.1:+18790954 | None:intergenic |
| GCAGCTTCGGAGTTATTCTC+TGG | 0.461190 | 4.1:-18790451 | MS.gene36445:CDS |
| GCAATAAGAGGAGGCGGAGG+AGG | 0.463947 | 4.1:-18790473 | MS.gene36445:CDS |
| GGAAACTAGTTGGATCAAAT+CGG | 0.466810 | 4.1:-18790141 | MS.gene36445:CDS |
| AGGTGTTGTATTGGGATAAC+CGG | 0.468626 | 4.1:+18790106 | None:intergenic |
| CTTTGTACATCTTTAGGTAT+CGG | 0.472738 | 4.1:-18790635 | MS.gene36445:CDS |
| TCATGCCTAAAGAAATTAGA+TGG | 0.473346 | 4.1:+18789609 | None:intergenic |
| ACCTCCAGAAGTTCTGCTCC+AGG | 0.474916 | 4.1:-18790087 | MS.gene36445:CDS |
| ATATTCCACATAACACGGCT+TGG | 0.479287 | 4.1:-18790736 | MS.gene36445:CDS |
| AAAGATGTACAAAGGCCTGC+AGG | 0.483734 | 4.1:+18790644 | None:intergenic |
| TTGAAGTAAGCCTTGGATGT+AGG | 0.484349 | 4.1:+18790059 | None:intergenic |
| TTCTTCAATTGAAACTGAAG+TGG | 0.484924 | 4.1:+18791090 | None:intergenic |
| CCCTGGAGCAGAACTTCTGG+AGG | 0.490999 | 4.1:+18790086 | None:intergenic |
| TACTTACCAATTGGAAGTGG+AGG | 0.497327 | 4.1:+18789576 | None:intergenic |
| CATAGAACCGTAAGCACCTC+CGG | 0.501126 | 4.1:+18790601 | None:intergenic |
| AAACTTCCCTCAATTCCCTA+TGG | 0.503759 | 4.1:-18790001 | MS.gene36445:CDS |
| AATGGTGTGAATATGAAATC+TGG | 0.504260 | 4.1:+18790923 | None:intergenic |
| TGAATCCAAGCCGTGTTATG+TGG | 0.508263 | 4.1:+18790731 | None:intergenic |
| GAACTACGAAAGTTGCTAAG+AGG | 0.515266 | 4.1:+18791131 | None:intergenic |
| CCAGGAACACTACCATTGCC+TGG | 0.516099 | 4.1:+18790278 | None:intergenic |
| AGTATCCCTCCACTTCCAAT+TGG | 0.521965 | 4.1:-18789582 | MS.gene36445:CDS |
| CGTAAGCACCTCCGGTAATG+AGG | 0.522399 | 4.1:+18790609 | None:intergenic |
| CACGTAGTTTAGCCAGGTCT+AGG | 0.524645 | 4.1:+18790771 | None:intergenic |
| TCTTACTTACCAATTGGAAG+TGG | 0.527064 | 4.1:+18789573 | None:intergenic |
| TTAATGATATGGAATCCCTA+TGG | 0.528439 | 4.1:-18789951 | MS.gene36445:CDS |
| ATTCTTGACAGAAAAGCAAT+GGG | 0.529934 | 4.1:-18790512 | MS.gene36445:CDS |
| ATATGGCAAAACATATGAGT+TGG | 0.530345 | 4.1:-18789824 | MS.gene36445:CDS |
| GGATTCAAGGATTGAAGTGT+AGG | 0.534815 | 4.1:+18790988 | None:intergenic |
| ATTGAAACTGAAGTGGAAAG+TGG | 0.535886 | 4.1:+18791097 | None:intergenic |
| AAATCGGTTCTTTATATCGC+CGG | 0.536045 | 4.1:-18790125 | MS.gene36445:CDS |
| GCTTCGGAGTTATTCTCTGG+TGG | 0.536428 | 4.1:-18790448 | MS.gene36445:CDS |
| TTACTGCACGTAGTTTAGCC+AGG | 0.536709 | 4.1:+18790765 | None:intergenic |
| CTACTCATCATTCCTCCATA+GGG | 0.537440 | 4.1:+18789936 | None:intergenic |
| AAATTCAGTACTTATCTGGA+TGG | 0.539864 | 4.1:-18789863 | MS.gene36445:CDS |
| CGTTGATATTCCACATAACA+CGG | 0.539970 | 4.1:-18790741 | MS.gene36445:CDS |
| TAACTTCAATAGGTTAGTAA+AGG | 0.543846 | 4.1:-18789649 | MS.gene36445:CDS |
| AATTCTTGACAGAAAAGCAA+TGG | 0.545747 | 4.1:-18790513 | MS.gene36445:CDS |
| TTGCACATATCACAGCTGCT+TGG | 0.546395 | 4.1:+18790885 | None:intergenic |
| ATGATGAGAAAGTATGGCCT+CGG | 0.549358 | 4.1:-18790581 | MS.gene36445:CDS |
| CTGCTTGGACTTGTGAGTCA+TGG | 0.555171 | 4.1:+18790900 | None:intergenic |
| AGTGTAGGACTTATTGGTTG+AGG | 0.555975 | 4.1:+18791003 | None:intergenic |
| AGCGGAGGACACGACTATGA+AGG | 0.557599 | 4.1:-18790833 | MS.gene36445:CDS |
| GTTGAGGTATAGATTGAAGA+GGG | 0.560414 | 4.1:+18791019 | None:intergenic |
| AATCCACTGCTCAAAACCTA+AGG | 0.560820 | 4.1:-18790970 | MS.gene36445:CDS |
| TACCAAGCTCTGTTTCTAGG+TGG | 0.564089 | 4.1:-18790233 | MS.gene36445:CDS |
| ACCGTTCATGATCCTAGACC+TGG | 0.569999 | 4.1:-18790783 | MS.gene36445:CDS |
| TGGGCAATAAGAGGAGGCGG+AGG | 0.574351 | 4.1:-18790476 | MS.gene36445:CDS |
| CTCCACCTAGAAACAGAGCT+TGG | 0.574955 | 4.1:+18790231 | None:intergenic |
| AACTACGAAAGTTGCTAAGA+GGG | 0.580812 | 4.1:+18791132 | None:intergenic |
| TGTACATCTTTAGGTATCGG+TGG | 0.582234 | 4.1:-18790632 | MS.gene36445:CDS |
| CCTATGGAGGAATGATGAGT+AGG | 0.584439 | 4.1:-18789935 | MS.gene36445:CDS |
| CAAAACATATGAGTTGGATG+AGG | 0.585356 | 4.1:-18789818 | MS.gene36445:CDS |
| GTCTTGATTCAACCAGGCAA+TGG | 0.587697 | 4.1:-18790290 | MS.gene36445:CDS |
| GCCAGGTCTAGGATCATGAA+CGG | 0.594071 | 4.1:+18790782 | None:intergenic |
| GTAGTTACAGTTCTTTGACC+AGG | 0.595410 | 4.1:+18790260 | None:intergenic |
| ATCAGAGTCTTGATTCAACC+AGG | 0.596708 | 4.1:-18790296 | MS.gene36445:CDS |
| ACTTACCAATTGGAAGTGGA+GGG | 0.597383 | 4.1:+18789577 | None:intergenic |
| TGGACTTGTGAGTCATGGAA+TGG | 0.604528 | 4.1:+18790905 | None:intergenic |
| AAGATGTACAAAGGCCTGCA+GGG | 0.604713 | 4.1:+18790645 | None:intergenic |
| CCAGGGAAAACCTACATCCA+AGG | 0.606686 | 4.1:-18790069 | MS.gene36445:CDS |
| CCTCCAGAAGTTCTGCTCCA+GGG | 0.608247 | 4.1:-18790086 | MS.gene36445:CDS |
| GGTTGAGGTATAGATTGAAG+AGG | 0.611987 | 4.1:+18791018 | None:intergenic |
| ATCGGTGGCCTCATTACCGG+AGG | 0.636534 | 4.1:-18790617 | MS.gene36445:CDS |
| ATGATATGGAATCCCTATGG+AGG | 0.647237 | 4.1:-18789948 | MS.gene36445:CDS |
| AACACGGCTTGGATTCAAGT+GGG | 0.648936 | 4.1:-18790725 | MS.gene36445:CDS |
| TAACACGGCTTGGATTCAAG+TGG | 0.650088 | 4.1:-18790726 | MS.gene36445:CDS |
| CATATGAGAATACGAAGCGG+AGG | 0.688013 | 4.1:-18790848 | MS.gene36445:CDS |
| CGATACCTAAAGATGTACAA+AGG | 0.714905 | 4.1:+18790636 | None:intergenic |
| ACAAAGAGTCTAGAACATGG+TGG | 0.728539 | 4.1:-18790377 | MS.gene36445:CDS |
| ATTCATATGAGAATACGAAG+CGG | 0.748676 | 4.1:-18790851 | MS.gene36445:CDS |
| GTAACAAAGAGTCTAGAACA+TGG | 0.767642 | 4.1:-18790380 | MS.gene36445:CDS |
| CAACAACGTTGTCAACACCG+AGG | 0.799916 | 4.1:+18790564 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATAGAGATTTGGATAT+AGG | - | chr4.1:18790985-18791004 | MS.gene36445:CDS | 20.0% |
| !! | ATTATAGAGATTTGGATATA+GGG | - | chr4.1:18790986-18791005 | MS.gene36445:CDS | 20.0% |
| !!! | AAAATTTTTCTTCAAGATGA+TGG | - | chr4.1:18790745-18790764 | MS.gene36445:CDS | 20.0% |
| !!! | AAGAGATTTTCATCAATATT+TGG | + | chr4.1:18790406-18790425 | None:intergenic | 20.0% |
| !!! | TTGAAGAAAAATTTTCCATA+GGG | + | chr4.1:18790740-18790759 | None:intergenic | 20.0% |
| ! | CTATGTGAATTATAGAGATT+TGG | - | chr4.1:18790978-18790997 | MS.gene36445:CDS | 25.0% |
| ! | TAACTTCAATAGGTTAGTAA+AGG | - | chr4.1:18791074-18791093 | MS.gene36445:CDS | 25.0% |
| ! | TACAAAATTCAGTACTTATC+TGG | - | chr4.1:18790856-18790875 | MS.gene36445:CDS | 25.0% |
| ! | TTATGCATCAAAAAATCCAA+GGG | - | chr4.1:18790951-18790970 | MS.gene36445:CDS | 25.0% |
| ! | TTGATCCATCTAATTTCTTT+AGG | - | chr4.1:18791109-18791128 | MS.gene36445:CDS | 25.0% |
| ! | TTTAACAAGAAAGGATTGTT+TGG | - | chr4.1:18790561-18790580 | MS.gene36445:CDS | 25.0% |
| !! | CTTGAAGAAAAATTTTCCAT+AGG | + | chr4.1:18790741-18790760 | None:intergenic | 25.0% |
| !!! | ATTTTAAGGGTAACTTCAAT+AGG | - | chr4.1:18791064-18791083 | MS.gene36445:CDS | 25.0% |
| AAATTCAGTACTTATCTGGA+TGG | - | chr4.1:18790860-18790879 | MS.gene36445:CDS | 30.0% | |
| AATGGTGTGAATATGAAATC+TGG | + | chr4.1:18789803-18789822 | None:intergenic | 30.0% | |
| AATTCTTGACAGAAAAGCAA+TGG | - | chr4.1:18790210-18790229 | MS.gene36445:CDS | 30.0% | |
| ATATGGCAAAACATATGAGT+TGG | - | chr4.1:18790899-18790918 | MS.gene36445:CDS | 30.0% | |
| ATGATGGTCCTTTAATGATA+TGG | - | chr4.1:18790761-18790780 | MS.gene36445:CDS | 30.0% | |
| ATTCATATGAGAATACGAAG+CGG | - | chr4.1:18789872-18789891 | MS.gene36445:CDS | 30.0% | |
| ATTCTTGACAGAAAAGCAAT+GGG | - | chr4.1:18790211-18790230 | MS.gene36445:CDS | 30.0% | |
| CTTATGCATCAAAAAATCCA+AGG | - | chr4.1:18790950-18790969 | MS.gene36445:CDS | 30.0% | |
| CTTTGTACATCTTTAGGTAT+CGG | - | chr4.1:18790088-18790107 | MS.gene36445:CDS | 30.0% | |
| GAAACAAGCTTCTTTATAGA+TGG | - | chr4.1:18790368-18790387 | MS.gene36445:CDS | 30.0% | |
| GATTGATGGAGAAAAGAATA+TGG | - | chr4.1:18790882-18790901 | MS.gene36445:CDS | 30.0% | |
| GCTAAAATCGTTAATGCTAA+TGG | - | chr4.1:18790184-18790203 | MS.gene36445:CDS | 30.0% | |
| GTGATATGTGCAAAAAAACA+TGG | - | chr4.1:18789848-18789867 | MS.gene36445:CDS | 30.0% | |
| TAGGGATTCCATATCATTAA+AGG | + | chr4.1:18790772-18790791 | None:intergenic | 30.0% | |
| TATAGATTGAAGAGGGAAAT+TGG | + | chr4.1:18789700-18789719 | None:intergenic | 30.0% | |
| TCATGCCTAAAGAAATTAGA+TGG | + | chr4.1:18791117-18791136 | None:intergenic | 30.0% | |
| TGAATTGGGTTTAACAAGAA+AGG | - | chr4.1:18790552-18790571 | MS.gene36445:CDS | 30.0% | |
| TTAATGATATGGAATCCCTA+TGG | - | chr4.1:18790772-18790791 | MS.gene36445:CDS | 30.0% | |
| TTCTTCAATTGAAACTGAAG+TGG | + | chr4.1:18789636-18789655 | None:intergenic | 30.0% | |
| TTTCTTGTTAAACCCAATTC+AGG | + | chr4.1:18790553-18790572 | None:intergenic | 30.0% | |
| ! | AAAAACTGTGACAGTTTTCA+CGG | - | chr4.1:18790321-18790340 | MS.gene36445:CDS | 30.0% |
| ! | AAATTTTCCATAGGGAATTG+AGG | + | chr4.1:18790732-18790751 | None:intergenic | 30.0% |
| ! | AATTTTCCATAGGGAATTGA+GGG | + | chr4.1:18790731-18790750 | None:intergenic | 30.0% |
| ! | TAATTCACATAGTTTTCCCT+TGG | + | chr4.1:18790970-18790989 | None:intergenic | 30.0% |
| ! | TTGGGGTTATAGGTATTTTA+AGG | - | chr4.1:18791050-18791069 | MS.gene36445:CDS | 30.0% |
| !! | GTGAATATGAAATCTGGTTT+TGG | + | chr4.1:18789797-18789816 | None:intergenic | 30.0% |
| !! | TGGGGTTATAGGTATTTTAA+GGG | - | chr4.1:18791051-18791070 | MS.gene36445:CDS | 30.0% |
| !!! | CTTGGATTTTTTGATGCATA+AGG | + | chr4.1:18790952-18790971 | None:intergenic | 30.0% |
| AACTACGAAAGTTGCTAAGA+GGG | + | chr4.1:18789594-18789613 | None:intergenic | 35.0% | |
| AGGATTGTTTGGAAACTAGT+TGG | - | chr4.1:18790572-18790591 | MS.gene36445:CDS | 35.0% | |
| ATTGAAACTGAAGTGGAAAG+TGG | + | chr4.1:18789629-18789648 | None:intergenic | 35.0% | |
| ATTGAAGAGGGAAATTGGTT+TGG | + | chr4.1:18789695-18789714 | None:intergenic | 35.0% | |
| CGATACCTAAAGATGTACAA+AGG | + | chr4.1:18790090-18790109 | None:intergenic | 35.0% | |
| CGTTGATATTCCACATAACA+CGG | - | chr4.1:18789982-18790001 | MS.gene36445:CDS | 35.0% | |
| CTGAAGGCAATAAATACCTT+AGG | + | chr4.1:18789772-18789791 | None:intergenic | 35.0% | |
| GAAAACTCTGCTTCATAACT+TGG | + | chr4.1:18790531-18790550 | None:intergenic | 35.0% | |
| GAATTTGAGCATGAAGTGAT+AGG | + | chr4.1:18789673-18789692 | None:intergenic | 35.0% | |
| GATTGAAGTGTAGGACTTAT+TGG | + | chr4.1:18789729-18789748 | None:intergenic | 35.0% | |
| GGAAACTAGTTGGATCAAAT+CGG | - | chr4.1:18790582-18790601 | MS.gene36445:CDS | 35.0% | |
| GGTTCTATGATGAGAAAGTA+TGG | - | chr4.1:18790136-18790155 | MS.gene36445:CDS | 35.0% | |
| GTTGAGGTATAGATTGAAGA+GGG | + | chr4.1:18789707-18789726 | None:intergenic | 35.0% | |
| TCTTTCTCTTGCTAACTCTT+GGG | - | chr4.1:18791032-18791051 | MS.gene36445:CDS | 35.0% | |
| ! | AAATCGGTTCTTTATATCGC+CGG | - | chr4.1:18790598-18790617 | MS.gene36445:CDS | 35.0% |
| ! | AAGCAGAGTTTTCCTGAATT+GGG | - | chr4.1:18790538-18790557 | MS.gene36445:CDS | 35.0% |
| ! | AATGGGAGAAGACCTATTTT+GGG | - | chr4.1:18790228-18790247 | MS.gene36445:CDS | 35.0% |
| ! | CAAAACATATGAGTTGGATG+AGG | - | chr4.1:18790905-18790924 | MS.gene36445:CDS | 35.0% |
| ! | GTAACAAAGAGTCTAGAACA+TGG | - | chr4.1:18790343-18790362 | MS.gene36445:CDS | 35.0% |
| ! | GTGAAAACTGTCACAGTTTT+TGG | + | chr4.1:18790322-18790341 | None:intergenic | 35.0% |
| ! | TAAAGAGTTCCTTTTCTGTG+AGG | + | chr4.1:18790838-18790857 | None:intergenic | 35.0% |
| !! | TACTTATCTGGATGGATTGA+TGG | - | chr4.1:18790868-18790887 | MS.gene36445:CDS | 35.0% |
| !!! | TTTTGCTTTGAAGTAAGCCT+TGG | + | chr4.1:18790674-18790693 | None:intergenic | 35.0% |
| AAACTTCCCTCAATTCCCTA+TGG | - | chr4.1:18790722-18790741 | MS.gene36445:CDS | 40.0% | |
| AATCCACTGCTCAAAACCTA+AGG | - | chr4.1:18789753-18789772 | MS.gene36445:CDS | 40.0% | |
| ACTTACCAATTGGAAGTGGA+GGG | + | chr4.1:18791149-18791168 | None:intergenic | 40.0% | |
| ATATTCCACATAACACGGCT+TGG | - | chr4.1:18789987-18790006 | MS.gene36445:CDS | 40.0% | |
| ATCAGAGTCTTGATTCAACC+AGG | - | chr4.1:18790427-18790446 | MS.gene36445:CDS | 40.0% | |
| ATGATATGGAATCCCTATGG+AGG | - | chr4.1:18790775-18790794 | MS.gene36445:CDS | 40.0% | |
| ATTCAAGTGGGTGCAACTAT+TGG | - | chr4.1:18790010-18790029 | MS.gene36445:CDS | 40.0% | |
| CTACTCATCATTCCTCCATA+GGG | + | chr4.1:18790790-18790809 | None:intergenic | 40.0% | |
| CTCCTCTTATTGCCCAAAAT+AGG | + | chr4.1:18790243-18790262 | None:intergenic | 40.0% | |
| CTTTCTCTTGCTAACTCTTG+GGG | - | chr4.1:18791033-18791052 | MS.gene36445:CDS | 40.0% | |
| GAACTACGAAAGTTGCTAAG+AGG | + | chr4.1:18789595-18789614 | None:intergenic | 40.0% | |
| GGATTCAAGGATTGAAGTGT+AGG | + | chr4.1:18789738-18789757 | None:intergenic | 40.0% | |
| GGTTGAGGTATAGATTGAAG+AGG | + | chr4.1:18789708-18789727 | None:intergenic | 40.0% | |
| GTAGTTACAGTTCTTTGACC+AGG | + | chr4.1:18790466-18790485 | None:intergenic | 40.0% | |
| GTCTTTCTCTTGCTAACTCT+TGG | - | chr4.1:18791031-18791050 | MS.gene36445:CDS | 40.0% | |
| TACTTACCAATTGGAAGTGG+AGG | + | chr4.1:18791150-18791169 | None:intergenic | 40.0% | |
| TCCGCAAAAAGTTCAGTTCA+TGG | - | chr4.1:18790052-18790071 | MS.gene36445:CDS | 40.0% | |
| TCTCTGGTGGAAGATCAAAT+TGG | - | chr4.1:18790288-18790307 | MS.gene36445:CDS | 40.0% | |
| TTGAAGTAAGCCTTGGATGT+AGG | + | chr4.1:18790667-18790686 | None:intergenic | 40.0% | |
| TTGCTAACTCTTGGGGTTAT+AGG | - | chr4.1:18791040-18791059 | MS.gene36445:CDS | 40.0% | |
| ! | ACAAAGAGTCTAGAACATGG+TGG | - | chr4.1:18790346-18790365 | MS.gene36445:CDS | 40.0% |
| ! | ACACCTTTTCCTCACAGAAA+AGG | - | chr4.1:18790826-18790845 | MS.gene36445:CDS | 40.0% |
| ! | AGGTGTTGTATTGGGATAAC+CGG | + | chr4.1:18790620-18790639 | None:intergenic | 40.0% |
| ! | AGTGTAGGACTTATTGGTTG+AGG | + | chr4.1:18789723-18789742 | None:intergenic | 40.0% |
| ! | ATGATGAGAAAGTATGGCCT+CGG | - | chr4.1:18790142-18790161 | MS.gene36445:CDS | 40.0% |
| ! | CAATGGGAGAAGACCTATTT+TGG | - | chr4.1:18790227-18790246 | MS.gene36445:CDS | 40.0% |
| ! | GAAGCAGAGTTTTCCTGAAT+TGG | - | chr4.1:18790537-18790556 | MS.gene36445:CDS | 40.0% |
| ! | GCCATGAACTGAACTTTTTG+CGG | + | chr4.1:18790056-18790075 | None:intergenic | 40.0% |
| ! | GTTCCTTTTCTGTGAGGAAA+AGG | + | chr4.1:18790832-18790851 | None:intergenic | 40.0% |
| ! | TCTTACCAAGCTCTGTTTCT+AGG | - | chr4.1:18790487-18790506 | MS.gene36445:CDS | 40.0% |
| !! | AACTTCTGGAGGTGTTGTAT+TGG | + | chr4.1:18790629-18790648 | None:intergenic | 40.0% |
| !! | ACTTCTGGAGGTGTTGTATT+GGG | + | chr4.1:18790628-18790647 | None:intergenic | 40.0% |
| !! | CTATTTTGGGCAATAAGAGG+AGG | - | chr4.1:18790241-18790260 | MS.gene36445:CDS | 40.0% |
| !! | GACCTATTTTGGGCAATAAG+AGG | - | chr4.1:18790238-18790257 | MS.gene36445:CDS | 40.0% |
| !! | TGTACATCTTTAGGTATCGG+TGG | - | chr4.1:18790091-18790110 | MS.gene36445:CDS | 40.0% |
| !!! | AAATCTGGTTTTGGCACTGA+AGG | + | chr4.1:18789788-18789807 | None:intergenic | 40.0% |
| !!! | ATACCTTAGGTTTTGAGCAG+TGG | + | chr4.1:18789759-18789778 | None:intergenic | 40.0% |
| AAAGATGTACAAAGGCCTGC+AGG | + | chr4.1:18790082-18790101 | None:intergenic | 45.0% | |
| AAGATGTACAAAGGCCTGCA+GGG | + | chr4.1:18790081-18790100 | None:intergenic | 45.0% | |
| AGGGAATTGAGGGAAGTTTC+TGG | + | chr4.1:18790721-18790740 | None:intergenic | 45.0% | |
| AGTATCCCTCCACTTCCAAT+TGG | - | chr4.1:18791141-18791160 | MS.gene36445:CDS | 45.0% | |
| CATATGAGAATACGAAGCGG+AGG | - | chr4.1:18789875-18789894 | MS.gene36445:CDS | 45.0% | |
| CCTACTCATCATTCCTCCAT+AGG | + | chr4.1:18790791-18790810 | None:intergenic | 45.0% | |
| CCTATGGAGGAATGATGAGT+AGG | - | chr4.1:18790788-18790807 | MS.gene36445:CDS | 45.0% | |
| GCAGGCCTTTGTACATCTTT+AGG | - | chr4.1:18790082-18790101 | MS.gene36445:CDS | 45.0% | |
| GTCTTGATTCAACCAGGCAA+TGG | - | chr4.1:18790433-18790452 | MS.gene36445:CDS | 45.0% | |
| TGAATCCAAGCCGTGTTATG+TGG | + | chr4.1:18789995-18790014 | None:intergenic | 45.0% | |
| TGGACTTGTGAGTCATGGAA+TGG | + | chr4.1:18789821-18789840 | None:intergenic | 45.0% | |
| TTACTGCACGTAGTTTAGCC+AGG | + | chr4.1:18789961-18789980 | None:intergenic | 45.0% | |
| TTGCACATATCACAGCTGCT+TGG | + | chr4.1:18789841-18789860 | None:intergenic | 45.0% | |
| ! | AACACGGCTTGGATTCAAGT+GGG | - | chr4.1:18789998-18790017 | MS.gene36445:CDS | 45.0% |
| ! | TAACACGGCTTGGATTCAAG+TGG | - | chr4.1:18789997-18790016 | MS.gene36445:CDS | 45.0% |
| ! | TTTTGGGCAATAAGAGGAGG+CGG | - | chr4.1:18790244-18790263 | MS.gene36445:CDS | 45.0% |
| !! | TACCAAGCTCTGTTTCTAGG+TGG | - | chr4.1:18790490-18790509 | MS.gene36445:CDS | 45.0% |
| !!! | ACTGTCACAGTTTTTGGCAC+AGG | + | chr4.1:18790316-18790335 | None:intergenic | 45.0% |
| !!! | GGTTTTGAGCAGTGGATTCA+AGG | + | chr4.1:18789751-18789770 | None:intergenic | 45.0% |
| ACCGTTCATGATCCTAGACC+TGG | - | chr4.1:18789940-18789959 | MS.gene36445:CDS | 50.0% | |
| CAACAACGTTGTCAACACCG+AGG | + | chr4.1:18790162-18790181 | None:intergenic | 50.0% | |
| CACGTAGTTTAGCCAGGTCT+AGG | + | chr4.1:18789955-18789974 | None:intergenic | 50.0% | |
| CATAGAACCGTAAGCACCTC+CGG | + | chr4.1:18790125-18790144 | None:intergenic | 50.0% | |
| CCAGGGAAAACCTACATCCA+AGG | - | chr4.1:18790654-18790673 | MS.gene36445:CDS | 50.0% | |
| CTCCACCTAGAAACAGAGCT+TGG | + | chr4.1:18790495-18790514 | None:intergenic | 50.0% | |
| CTGCTTGGACTTGTGAGTCA+TGG | + | chr4.1:18789826-18789845 | None:intergenic | 50.0% | |
| GCAGCTTCGGAGTTATTCTC+TGG | - | chr4.1:18790272-18790291 | MS.gene36445:CDS | 50.0% | |
| GCTTCGGAGTTATTCTCTGG+TGG | - | chr4.1:18790275-18790294 | MS.gene36445:CDS | 50.0% | |
| TTTCCCTGGAGCAGAACTTC+TGG | + | chr4.1:18790643-18790662 | None:intergenic | 50.0% | |
| ! | CCTTGGATGTAGGTTTTCCC+TGG | + | chr4.1:18790657-18790676 | None:intergenic | 50.0% |
| ! | GCCAGGTCTAGGATCATGAA+CGG | + | chr4.1:18789944-18789963 | None:intergenic | 50.0% |
| !! | CTCATTACCGGAGGTGCTTA+CGG | - | chr4.1:18790115-18790134 | MS.gene36445:CDS | 50.0% |
| ACCTCCAGAAGTTCTGCTCC+AGG | - | chr4.1:18790636-18790655 | MS.gene36445:CDS | 55.0% | |
| AGCGGAGGACACGACTATGA+AGG | - | chr4.1:18789890-18789909 | MS.gene36445:CDS | 55.0% | |
| CCAGGAACACTACCATTGCC+TGG | + | chr4.1:18790448-18790467 | None:intergenic | 55.0% | |
| CCTCCAGAAGTTCTGCTCCA+GGG | - | chr4.1:18790637-18790656 | MS.gene36445:CDS | 55.0% | |
| CGTAAGCACCTCCGGTAATG+AGG | + | chr4.1:18790117-18790136 | None:intergenic | 55.0% | |
| TCAGTTCATGGCTTCCCTGC+AGG | - | chr4.1:18790064-18790083 | MS.gene36445:CDS | 55.0% | |
| ! | CCAGGCAATGGTAGTGTTCC+TGG | - | chr4.1:18790445-18790464 | MS.gene36445:CDS | 55.0% |
| !! | GGTATCGGTGGCCTCATTAC+CGG | - | chr4.1:18790103-18790122 | MS.gene36445:CDS | 55.0% |
| ATCGGTGGCCTCATTACCGG+AGG | - | chr4.1:18790106-18790125 | MS.gene36445:CDS | 60.0% | |
| CCCTGGAGCAGAACTTCTGG+AGG | + | chr4.1:18790640-18790659 | None:intergenic | 60.0% | |
| GCAATAAGAGGAGGCGGAGG+AGG | - | chr4.1:18790250-18790269 | MS.gene36445:CDS | 60.0% | |
| TGGGCAATAAGAGGAGGCGG+AGG | - | chr4.1:18790247-18790266 | MS.gene36445:CDS | 60.0% | |
| GGAGGCGGAGGAGGCAGCTT+CGG | - | chr4.1:18790259-18790278 | MS.gene36445:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 18789575 | 18791170 | 18789575 | ID=MS.gene36445 |
| chr4.1 | mRNA | 18789575 | 18791170 | 18789575 | ID=MS.gene36445.t1;Parent=MS.gene36445 |
| chr4.1 | exon | 18789575 | 18791170 | 18789575 | ID=MS.gene36445.t1.exon1;Parent=MS.gene36445.t1 |
| chr4.1 | CDS | 18789575 | 18791170 | 18789575 | ID=cds.MS.gene36445.t1;Parent=MS.gene36445.t1 |
| Gene Sequence |
| Protein sequence |
