Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37345.t1 | XP_003627109.1 | 72 | 517 | 24 | 4 | 1 | 396 | 1 | 517 | 3.00E-161 | 578.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37345.t1 | Q8H1F5 | 78.5 | 186 | 37 | 3 | 18 | 201 | 21 | 205 | 3.4e-81 | 303.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37345.t1 | G7LHG9 | 72.0 | 517 | 24 | 4 | 1 | 396 | 1 | 517 | 2.1e-161 | 578.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene37345.t1 | TF | C2H2 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049235 | MS.gene37345 | 0.81709 | 3.95E-52 | -1.69E-46 |
| MS.gene049283 | MS.gene37345 | -0.810595 | 1.07E-50 | -1.69E-46 |
| MS.gene049580 | MS.gene37345 | -0.838297 | 3.13E-57 | -1.69E-46 |
| MS.gene049680 | MS.gene37345 | -0.803438 | 3.49E-49 | -1.69E-46 |
| MS.gene050752 | MS.gene37345 | -0.860563 | 1.89E-63 | -1.69E-46 |
| MS.gene050838 | MS.gene37345 | -0.832556 | 8.83E-56 | -1.69E-46 |
| MS.gene050945 | MS.gene37345 | -0.885939 | 5.28E-72 | -1.69E-46 |
| MS.gene050955 | MS.gene37345 | -0.862273 | 5.69E-64 | -1.69E-46 |
| MS.gene051003 | MS.gene37345 | -0.82103 | 5.01E-53 | -1.69E-46 |
| MS.gene051043 | MS.gene37345 | -0.817535 | 3.14E-52 | -1.69E-46 |
| MS.gene051233 | MS.gene37345 | -0.814964 | 1.18E-51 | -1.69E-46 |
| MS.gene051234 | MS.gene37345 | -0.850379 | 1.76E-60 | -1.69E-46 |
| MS.gene051343 | MS.gene37345 | -0.831308 | 1.80E-55 | -1.69E-46 |
| MS.gene051699 | MS.gene37345 | -0.829758 | 4.30E-55 | -1.69E-46 |
| MS.gene051746 | MS.gene37345 | -0.800522 | 1.39E-48 | -1.69E-46 |
| MS.gene051748 | MS.gene37345 | -0.810083 | 1.37E-50 | -1.69E-46 |
| MS.gene051902 | MS.gene37345 | -0.824394 | 8.27E-54 | -1.69E-46 |
| MS.gene051903 | MS.gene37345 | -0.839563 | 1.47E-57 | -1.69E-46 |
| MS.gene052072 | MS.gene37345 | -0.850832 | 1.32E-60 | -1.69E-46 |
| MS.gene052239 | MS.gene37345 | 0.80588 | 1.08E-49 | -1.69E-46 |
| MS.gene052242 | MS.gene37345 | 0.847375 | 1.20E-59 | -1.69E-46 |
| MS.gene052296 | MS.gene37345 | -0.833414 | 5.41E-56 | -1.69E-46 |
| MS.gene052479 | MS.gene37345 | -0.846301 | 2.37E-59 | -1.69E-46 |
| MS.gene052533 | MS.gene37345 | -0.81438 | 1.59E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene37345 | -0.823255 | 1.53E-53 | -1.69E-46 |
| MS.gene052818 | MS.gene37345 | 0.828933 | 6.82E-55 | -1.69E-46 |
| MS.gene052947 | MS.gene37345 | -0.84774 | 9.55E-60 | -1.69E-46 |
| MS.gene053058 | MS.gene37345 | -0.804747 | 1.86E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene37345 | -0.813667 | 2.28E-51 | -1.69E-46 |
| MS.gene054222 | MS.gene37345 | -0.814734 | 1.32E-51 | -1.69E-46 |
| MS.gene054403 | MS.gene37345 | -0.866055 | 3.77E-65 | -1.69E-46 |
| MS.gene054413 | MS.gene37345 | -0.84532 | 4.37E-59 | -1.69E-46 |
| MS.gene05469 | MS.gene37345 | -0.827638 | 1.40E-54 | -1.69E-46 |
| MS.gene05548 | MS.gene37345 | -0.805954 | 1.04E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene37345 | -0.844288 | 8.29E-59 | -1.69E-46 |
| MS.gene055765 | MS.gene37345 | -0.806242 | 9.05E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene37345 | -0.803103 | 4.09E-49 | -1.69E-46 |
| MS.gene057094 | MS.gene37345 | -0.805074 | 1.59E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene37345 | -0.833305 | 5.76E-56 | -1.69E-46 |
| MS.gene057234 | MS.gene37345 | -0.80051 | 1.39E-48 | -1.69E-46 |
| MS.gene057622 | MS.gene37345 | -0.806181 | 9.32E-50 | -1.69E-46 |
| MS.gene057694 | MS.gene37345 | -0.806372 | 8.49E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene37345 | -0.874022 | 9.34E-68 | -1.69E-46 |
| MS.gene05781 | MS.gene37345 | -0.816996 | 4.15E-52 | -1.69E-46 |
| MS.gene057890 | MS.gene37345 | 0.812642 | 3.83E-51 | -1.69E-46 |
| MS.gene057999 | MS.gene37345 | -0.828889 | 6.99E-55 | -1.69E-46 |
| MS.gene058054 | MS.gene37345 | -0.805624 | 1.22E-49 | -1.69E-46 |
| MS.gene058074 | MS.gene37345 | -0.875069 | 4.12E-68 | -1.69E-46 |
| MS.gene058159 | MS.gene37345 | -0.814719 | 1.34E-51 | -1.69E-46 |
| MS.gene058261 | MS.gene37345 | -0.80559 | 1.24E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene37345 | -0.83822 | 3.27E-57 | -1.69E-46 |
| MS.gene059227 | MS.gene37345 | -0.806177 | 9.34E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene37345 | 0.839346 | 1.67E-57 | -1.69E-46 |
| MS.gene06001 | MS.gene37345 | -0.802909 | 4.49E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene37345 | -0.813054 | 3.11E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene37345 | -0.805043 | 1.62E-49 | -1.69E-46 |
| MS.gene060763 | MS.gene37345 | -0.841731 | 3.98E-58 | -1.69E-46 |
| MS.gene061100 | MS.gene37345 | -0.815264 | 1.01E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37345.t1 | MTR_8g017210 | 99.015 | 203 | 0 | 1 | 1 | 201 | 1 | 203 | 5.33e-149 | 432 |
| MS.gene37345.t1 | MTR_8g017210 | 85.149 | 202 | 23 | 2 | 202 | 396 | 316 | 517 | 3.26e-89 | 279 |
| MS.gene37345.t1 | MTR_2g099990 | 82.199 | 191 | 23 | 4 | 18 | 201 | 1 | 187 | 3.53e-108 | 326 |
| MS.gene37345.t1 | MTR_2g099990 | 45.673 | 208 | 67 | 11 | 207 | 396 | 288 | 467 | 6.31e-34 | 131 |
| MS.gene37345.t1 | MTR_1g094115 | 88.194 | 144 | 17 | 0 | 58 | 201 | 45 | 188 | 6.59e-97 | 299 |
| MS.gene37345.t1 | MTR_4g059870 | 79.310 | 174 | 34 | 2 | 29 | 201 | 8 | 180 | 9.54e-97 | 298 |
| MS.gene37345.t1 | MTR_1g016010 | 71.782 | 202 | 37 | 3 | 1 | 201 | 1 | 183 | 5.63e-95 | 291 |
| MS.gene37345.t1 | MTR_1g112270 | 87.770 | 139 | 17 | 0 | 63 | 201 | 47 | 185 | 1.92e-93 | 291 |
| MS.gene37345.t1 | MTR_2g093960 | 86.111 | 144 | 19 | 1 | 59 | 201 | 31 | 174 | 6.14e-92 | 283 |
| MS.gene37345.t1 | MTR_1g112270 | 82.313 | 147 | 26 | 0 | 55 | 201 | 50 | 196 | 7.88e-90 | 282 |
| MS.gene37345.t1 | MTR_2g090745 | 86.364 | 132 | 18 | 0 | 70 | 201 | 17 | 148 | 1.46e-84 | 264 |
| MS.gene37345.t1 | MTR_2g099990 | 94.915 | 118 | 6 | 0 | 84 | 201 | 1 | 118 | 9.80e-83 | 258 |
| MS.gene37345.t1 | MTR_2g099990 | 45.673 | 208 | 67 | 11 | 207 | 396 | 219 | 398 | 3.22e-34 | 131 |
| MS.gene37345.t1 | MTR_1g094115 | 78.472 | 144 | 14 | 1 | 58 | 201 | 45 | 171 | 5.78e-81 | 258 |
| MS.gene37345.t1 | MTR_2g017720 | 76.667 | 120 | 23 | 1 | 65 | 184 | 318 | 432 | 2.00e-58 | 196 |
| MS.gene37345.t1 | MTR_3g102000 | 71.717 | 99 | 21 | 2 | 87 | 181 | 36 | 131 | 4.63e-42 | 147 |
| MS.gene37345.t1 | MTR_5g030560 | 72.000 | 50 | 14 | 0 | 65 | 114 | 11 | 60 | 9.43e-21 | 86.3 |
| MS.gene37345.t1 | MTR_1g093095 | 35.385 | 130 | 70 | 5 | 83 | 200 | 109 | 236 | 1.19e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene37345.t1 | AT1G55110 | 78.421 | 190 | 38 | 3 | 14 | 201 | 17 | 205 | 1.15e-105 | 319 |
| MS.gene37345.t1 | AT1G55110 | 78.421 | 190 | 38 | 3 | 14 | 201 | 17 | 205 | 1.15e-105 | 319 |
| MS.gene37345.t1 | AT1G55110 | 78.421 | 190 | 38 | 3 | 14 | 201 | 17 | 205 | 1.15e-105 | 319 |
| MS.gene37345.t1 | AT3G13810 | 78.061 | 196 | 34 | 3 | 15 | 201 | 17 | 212 | 2.81e-104 | 318 |
| MS.gene37345.t1 | AT3G13810 | 33.333 | 192 | 81 | 7 | 216 | 396 | 358 | 513 | 4.54e-17 | 83.2 |
| MS.gene37345.t1 | AT3G13810 | 78.061 | 196 | 34 | 3 | 15 | 201 | 17 | 212 | 2.81e-104 | 318 |
| MS.gene37345.t1 | AT3G13810 | 33.333 | 192 | 81 | 7 | 216 | 396 | 358 | 513 | 4.54e-17 | 83.2 |
| MS.gene37345.t1 | AT3G13810 | 78.061 | 196 | 34 | 3 | 15 | 201 | 12 | 207 | 5.18e-104 | 317 |
| MS.gene37345.t1 | AT3G13810 | 33.333 | 192 | 81 | 7 | 216 | 396 | 353 | 508 | 5.38e-17 | 83.2 |
| MS.gene37345.t1 | AT3G13810 | 78.238 | 193 | 33 | 3 | 18 | 201 | 1 | 193 | 2.16e-102 | 312 |
| MS.gene37345.t1 | AT3G13810 | 33.333 | 192 | 81 | 7 | 216 | 396 | 339 | 494 | 4.82e-17 | 83.2 |
| MS.gene37345.t1 | AT5G66730 | 73.118 | 186 | 33 | 2 | 17 | 201 | 4 | 173 | 2.91e-96 | 296 |
| MS.gene37345.t1 | AT1G03840 | 70.312 | 192 | 50 | 2 | 52 | 243 | 35 | 219 | 4.50e-96 | 296 |
| MS.gene37345.t1 | AT3G50700 | 70.745 | 188 | 36 | 2 | 17 | 201 | 4 | 175 | 7.58e-96 | 294 |
| MS.gene37345.t1 | AT1G14580 | 70.718 | 181 | 49 | 1 | 21 | 201 | 18 | 194 | 3.80e-95 | 293 |
| MS.gene37345.t1 | AT1G14580 | 70.718 | 181 | 49 | 1 | 21 | 201 | 18 | 194 | 3.80e-95 | 293 |
| MS.gene37345.t1 | AT1G14580 | 70.718 | 181 | 49 | 1 | 21 | 201 | 32 | 208 | 6.47e-95 | 293 |
| MS.gene37345.t1 | AT2G02080 | 83.333 | 144 | 24 | 0 | 58 | 201 | 52 | 195 | 1.82e-94 | 292 |
| MS.gene37345.t1 | AT2G02080 | 83.333 | 144 | 24 | 0 | 58 | 201 | 52 | 195 | 1.82e-94 | 292 |
| MS.gene37345.t1 | AT2G02080 | 83.333 | 144 | 24 | 0 | 58 | 201 | 52 | 195 | 1.82e-94 | 292 |
| MS.gene37345.t1 | AT2G02080 | 83.333 | 144 | 24 | 0 | 58 | 201 | 52 | 195 | 1.82e-94 | 292 |
| MS.gene37345.t1 | AT5G44160 | 75.723 | 173 | 40 | 1 | 29 | 201 | 8 | 178 | 8.15e-94 | 289 |
| MS.gene37345.t1 | AT4G02670 | 51.582 | 316 | 87 | 9 | 27 | 281 | 17 | 327 | 5.95e-93 | 285 |
| MS.gene37345.t1 | AT4G02670 | 51.582 | 316 | 87 | 9 | 27 | 281 | 19 | 329 | 6.05e-93 | 285 |
| MS.gene37345.t1 | AT3G45260 | 86.713 | 143 | 18 | 1 | 60 | 201 | 39 | 181 | 6.49e-93 | 286 |
| MS.gene37345.t1 | AT3G45260 | 86.713 | 143 | 18 | 1 | 60 | 201 | 39 | 181 | 6.49e-93 | 286 |
| MS.gene37345.t1 | AT1G03840 | 69.271 | 192 | 50 | 3 | 52 | 243 | 35 | 217 | 3.78e-92 | 286 |
| MS.gene37345.t1 | AT5G60470 | 76.074 | 163 | 35 | 2 | 40 | 201 | 23 | 182 | 3.44e-90 | 280 |
| MS.gene37345.t1 | AT5G60470 | 76.074 | 163 | 35 | 2 | 40 | 201 | 27 | 186 | 4.11e-90 | 280 |
| MS.gene37345.t1 | AT3G13810 | 70.792 | 202 | 44 | 3 | 15 | 201 | 12 | 213 | 4.24e-90 | 281 |
| MS.gene37345.t1 | AT3G13810 | 33.333 | 192 | 81 | 7 | 216 | 396 | 359 | 514 | 4.01e-17 | 83.6 |
| MS.gene37345.t1 | AT5G03150 | 85.315 | 143 | 20 | 1 | 60 | 201 | 53 | 195 | 4.63e-90 | 281 |
| MS.gene37345.t1 | AT2G02070 | 83.099 | 142 | 24 | 0 | 60 | 201 | 52 | 193 | 1.40e-89 | 282 |
| MS.gene37345.t1 | AT2G02070 | 83.099 | 142 | 24 | 0 | 60 | 201 | 52 | 193 | 1.40e-89 | 282 |
| MS.gene37345.t1 | AT3G13810 | 70.854 | 199 | 43 | 3 | 18 | 201 | 1 | 199 | 2.52e-88 | 276 |
| MS.gene37345.t1 | AT3G13810 | 33.333 | 192 | 81 | 7 | 216 | 396 | 345 | 500 | 4.08e-17 | 83.6 |
| MS.gene37345.t1 | AT5G44160 | 85.606 | 132 | 19 | 0 | 70 | 201 | 8 | 139 | 1.38e-84 | 264 |
| MS.gene37345.t1 | AT5G60470 | 74.342 | 152 | 37 | 2 | 52 | 201 | 26 | 177 | 1.21e-81 | 257 |
| MS.gene37345.t1 | AT2G02080 | 85.593 | 118 | 17 | 0 | 84 | 201 | 1 | 118 | 1.48e-78 | 249 |
| MS.gene37345.t1 | AT2G02080 | 85.593 | 118 | 17 | 0 | 84 | 201 | 1 | 118 | 1.48e-78 | 249 |
| MS.gene37345.t1 | AT1G25250 | 65.986 | 147 | 47 | 2 | 60 | 203 | 33 | 179 | 9.60e-71 | 227 |
| MS.gene37345.t1 | AT1G68130 | 65.753 | 146 | 48 | 2 | 60 | 203 | 41 | 186 | 3.16e-70 | 227 |
| MS.gene37345.t1 | AT2G01940 | 64.667 | 150 | 51 | 2 | 56 | 203 | 40 | 189 | 1.10e-69 | 226 |
| MS.gene37345.t1 | AT2G01940 | 65.333 | 150 | 49 | 3 | 56 | 203 | 40 | 188 | 1.53e-68 | 223 |
| MS.gene37345.t1 | AT1G25250 | 62.745 | 153 | 52 | 3 | 56 | 203 | 4 | 156 | 6.07e-68 | 219 |
| MS.gene37345.t1 | AT1G68130 | 67.000 | 100 | 31 | 2 | 106 | 203 | 1 | 100 | 1.37e-43 | 155 |
| MS.gene37345.t1 | AT1G25250 | 66.337 | 101 | 31 | 2 | 106 | 203 | 1 | 101 | 2.08e-43 | 154 |
| MS.gene37345.t1 | AT2G01940 | 65.000 | 100 | 33 | 2 | 106 | 203 | 1 | 100 | 4.69e-42 | 151 |
| MS.gene37345.t1 | AT1G34370 | 32.022 | 178 | 98 | 4 | 69 | 223 | 14 | 191 | 1.61e-22 | 97.1 |
| MS.gene37345.t1 | AT1G34370 | 32.022 | 178 | 98 | 4 | 69 | 223 | 224 | 401 | 2.39e-22 | 99.0 |
| MS.gene37345.t1 | AT1G34370 | 32.022 | 178 | 98 | 4 | 69 | 223 | 224 | 401 | 2.39e-22 | 99.0 |
| MS.gene37345.t1 | AT5G22890 | 34.194 | 155 | 86 | 5 | 61 | 201 | 191 | 343 | 1.11e-20 | 93.2 |
| MS.gene37345.t1 | AT1G08290 | 33.750 | 160 | 87 | 6 | 59 | 200 | 141 | 299 | 1.61e-17 | 83.6 |
| MS.gene37345.t1 | AT1G13290 | 34.375 | 128 | 73 | 4 | 83 | 200 | 95 | 221 | 2.48e-17 | 82.4 |
| MS.gene37345.t1 | AT1G51220 | 33.333 | 126 | 75 | 3 | 83 | 200 | 172 | 296 | 3.80e-17 | 82.4 |
| MS.gene37345.t1 | AT3G20880 | 34.127 | 126 | 74 | 3 | 83 | 200 | 250 | 374 | 4.58e-17 | 82.8 |
| MS.gene37345.t1 | AT3G57670 | 33.858 | 127 | 73 | 4 | 83 | 200 | 211 | 335 | 5.80e-17 | 82.4 |
| MS.gene37345.t1 | AT1G34790 | 33.824 | 136 | 81 | 3 | 73 | 200 | 129 | 263 | 4.77e-16 | 78.6 |
Find 77 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCAAACATTTCATCAAAT+TGG | 0.116876 | 8.4:-74923384 | None:intergenic |
| TTCTCTAGTGCCACATGTTT+TGG | 0.232714 | 8.4:-74921974 | None:intergenic |
| TGTAATCATAAGATGGTAAA+AGG | 0.239938 | 8.4:+74921312 | None:intergenic |
| TCTGGTAACAGAACTGAAAT+TGG | 0.252456 | 8.4:+74921417 | MS.gene37345:CDS |
| CCTAGTCTTGTTCATGTTCC+TGG | 0.271217 | 8.4:+74923046 | MS.gene37345:intron |
| CATGATCCATCAAGAGCATT+AGG | 0.324615 | 8.4:+74921841 | MS.gene37345:CDS |
| AGGTTTGACAAGAGATTTCT+TGG | 0.358914 | 8.4:+74923504 | MS.gene37345:CDS |
| CAAGAGATTTCTTGGGGCTT+AGG | 0.363505 | 8.4:+74923512 | MS.gene37345:CDS |
| ACCAAACATTTCATCAAATT+GGG | 0.370739 | 8.4:-74923383 | None:intergenic |
| ATGATCCATCAAGAGCATTA+GGG | 0.372273 | 8.4:+74921842 | MS.gene37345:CDS |
| ATAGCTATCACCTCAGCATC+AGG | 0.378713 | 8.4:-74921634 | None:intergenic |
| AATAATGTCTCTGGTAACTT+TGG | 0.395509 | 8.4:+74923223 | MS.gene37345:CDS |
| CTTCCACTACTTGTTGCTGT+TGG | 0.402652 | 8.4:-74921347 | None:intergenic |
| GGTGAAGCTAGTGTTTCTTC+TGG | 0.407702 | 8.4:+74921399 | MS.gene37345:CDS |
| AAATCCCCTAATGCTCTTGA+TGG | 0.408372 | 8.4:-74921847 | None:intergenic |
| GTTGCAGAAAGCAGCTCAAA+TGG | 0.410516 | 8.4:+74923126 | MS.gene37345:CDS |
| TGATGCACACAAGTTGGTTC+TGG | 0.417382 | 8.4:-74921820 | None:intergenic |
| AGTGACATTCTAAGTATTGC+AGG | 0.426084 | 8.4:+74923547 | MS.gene37345:CDS |
| AATATGCTGTTCAATCTGAT+TGG | 0.427517 | 8.4:+74921941 | MS.gene37345:CDS |
| ACCACCAATGACGGCGGCGG+CGG | 0.437182 | 8.4:+74923466 | MS.gene37345:CDS |
| ATTCTAAGTATTGCAGGGAT+TGG | 0.439295 | 8.4:+74923553 | MS.gene37345:CDS |
| ACCCAATTTGATGAAATGTT+TGG | 0.443043 | 8.4:+74923382 | MS.gene37345:CDS |
| ACCAATGACGGCGGCGGCGG+CGG | 0.448654 | 8.4:+74923469 | MS.gene37345:CDS |
| GAAAACAAACCTGGGTTACC+AGG | 0.450492 | 8.4:-74921519 | None:intergenic |
| ATATGTGAGATCTGCAACAA+AGG | 0.458644 | 8.4:+74921691 | MS.gene37345:CDS |
| TCAAACTTAACTTCTGCATC+TGG | 0.461869 | 8.4:+74921378 | MS.gene37345:CDS |
| GATTCTCTCAATAATGTCTC+TGG | 0.462323 | 8.4:+74923214 | MS.gene37345:CDS |
| GAAGTAGTTGCAGTAGTTGT+TGG | 0.470353 | 8.4:-74923295 | None:intergenic |
| AAAGCCATCATGGCAAGGTT+AGG | 0.473421 | 8.4:+74923615 | MS.gene37345:CDS |
| TGGGTCTTAATATTCATAGT+TGG | 0.475879 | 8.4:-74923184 | None:intergenic |
| GGTGCAACAATGAATAGAAC+TGG | 0.479773 | 8.4:+74923148 | MS.gene37345:CDS |
| TCAAGTTCAACAACAATACT+TGG | 0.481347 | 8.4:+74921458 | MS.gene37345:CDS |
| GAAGGTACTGTTTGGTAAGA+AGG | 0.483393 | 8.4:-74923079 | None:intergenic |
| GTTCTTTGCTTCAACTTCCA+TGG | 0.484808 | 8.4:-74921763 | None:intergenic |
| GCCGCCGCCGCCGTCATTGG+TGG | 0.485478 | 8.4:-74923467 | None:intergenic |
| ATCAATCTCAAAAGCCATCA+TGG | 0.486220 | 8.4:+74923605 | MS.gene37345:CDS |
| TATGTGAGATCTGCAACAAA+GGG | 0.489223 | 8.4:+74921692 | MS.gene37345:CDS |
| TTTAGTTTACCTTGAGAAGA+GGG | 0.493139 | 8.4:-74922016 | None:intergenic |
| GGTTTGACAAGAGATTTCTT+GGG | 0.503476 | 8.4:+74923505 | MS.gene37345:CDS |
| TGGACCTAACCTTGCCATGA+TGG | 0.507628 | 8.4:-74923619 | None:intergenic |
| AGTATTGTTGTTGAACTTGA+GGG | 0.512238 | 8.4:-74921455 | None:intergenic |
| GAAAACATGGTGAGAAGAAG+TGG | 0.515681 | 8.4:+74921896 | MS.gene37345:CDS |
| CATTATTGAGAGAATCAACT+TGG | 0.518652 | 8.4:-74923207 | None:intergenic |
| GGCGGCGGTGGTGGAAATGA+AGG | 0.520549 | 8.4:+74923484 | MS.gene37345:CDS |
| CAATTTGATGAAATGTTTGG+TGG | 0.530509 | 8.4:+74923385 | MS.gene37345:CDS |
| AAGTATTGTTGTTGAACTTG+AGG | 0.537745 | 8.4:-74921456 | None:intergenic |
| TTGCAGAAAGCAGCTCAAAT+GGG | 0.549522 | 8.4:+74923127 | MS.gene37345:CDS |
| ACAACCACCAATGACGGCGG+CGG | 0.551544 | 8.4:+74923463 | MS.gene37345:CDS |
| TAAGAAGGGAGTGTGGGTCC+AGG | 0.557369 | 8.4:-74923064 | None:intergenic |
| AGAGCATTAGGGGATTTGAC+TGG | 0.562614 | 8.4:+74921853 | MS.gene37345:CDS |
| ATTGAGAGAATCAACTTGGT+GGG | 0.565155 | 8.4:-74923203 | None:intergenic |
| AAGGTACTGTTTGGTAAGAA+GGG | 0.566686 | 8.4:-74923078 | None:intergenic |
| GTTCCAACAGCAACAAGTAG+TGG | 0.573848 | 8.4:+74921344 | MS.gene37345:CDS |
| TCTAAAACAACCACCAATGA+CGG | 0.576584 | 8.4:+74923457 | MS.gene37345:CDS |
| AATCTTCAACTTCACAGAAG+AGG | 0.577210 | 8.4:+74921730 | MS.gene37345:CDS |
| ATTTAGTTTACCTTGAGAAG+AGG | 0.584975 | 8.4:-74922017 | None:intergenic |
| TATTGAGAGAATCAACTTGG+TGG | 0.585481 | 8.4:-74923204 | None:intergenic |
| TGTGAGCTGAAGGTACTGTT+TGG | 0.586948 | 8.4:-74923087 | None:intergenic |
| AGAAACCTCCCTGGTAACCC+AGG | 0.588025 | 8.4:+74921510 | MS.gene37345:CDS |
| GTGACATTCTAAGTATTGCA+GGG | 0.598839 | 8.4:+74923548 | MS.gene37345:CDS |
| GTTTGACAAGAGATTTCTTG+GGG | 0.605661 | 8.4:+74923506 | MS.gene37345:CDS |
| TGATCCATCAAGAGCATTAG+GGG | 0.622634 | 8.4:+74921843 | MS.gene37345:CDS |
| TCTCAAAAGCCATCATGGCA+AGG | 0.624497 | 8.4:+74923610 | MS.gene37345:CDS |
| TGGGTTGCTTCAAATCCAGA+AGG | 0.625506 | 8.4:-74923364 | None:intergenic |
| GTTTGGTAAGAAGGGAGTGT+GGG | 0.626393 | 8.4:-74923070 | None:intergenic |
| TGTTTGGTAAGAAGGGAGTG+TGG | 0.632667 | 8.4:-74923071 | None:intergenic |
| ACTGTGGAACCCTCTTCTCA+AGG | 0.634375 | 8.4:+74922007 | MS.gene37345:CDS |
| AGAATGTCACTATGTGACAA+TGG | 0.635720 | 8.4:-74923535 | None:intergenic |
| GGATCATGATGCACACAAGT+TGG | 0.642093 | 8.4:-74921826 | None:intergenic |
| TAGCTATCACCTCAGCATCA+GGG | 0.653370 | 8.4:-74921633 | None:intergenic |
| AAAACAAACCTGGGTTACCA+GGG | 0.660704 | 8.4:-74921518 | None:intergenic |
| ACAAACCTGGGTTACCAGGG+AGG | 0.662065 | 8.4:-74921515 | None:intergenic |
| GAAGAGGTCACAATTTACCA+TGG | 0.668846 | 8.4:+74921746 | MS.gene37345:CDS |
| GTAGCTGACATGTGAGCTGA+AGG | 0.671459 | 8.4:-74923097 | None:intergenic |
| AAAGCTCATTCCAAAACATG+TGG | 0.678165 | 8.4:+74921964 | MS.gene37345:CDS |
| AAAACAACCACCAATGACGG+CGG | 0.684546 | 8.4:+74923460 | MS.gene37345:CDS |
| AGAGAATATAGATGTGACTG+TGG | 0.703138 | 8.4:+74921991 | MS.gene37345:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAAAACTATATAATATTAA+GGG | - | chr8.4:74922346-74922365 | None:intergenic | 10.0% |
| !! | TGTAAAACTATATAATATTA+AGG | - | chr8.4:74922347-74922366 | None:intergenic | 10.0% |
| !! | TTAATTTCATTCATTTATGA+AGG | + | chr8.4:74922086-74922105 | MS.gene37345:intron | 15.0% |
| !! | AACAAATCAAAACAAAAAGA+AGG | - | chr8.4:74921547-74921566 | None:intergenic | 20.0% |
| !! | AAGACAAATAGTCTATTATT+AGG | - | chr8.4:74922510-74922529 | None:intergenic | 20.0% |
| !! | CATTAAAAAATTTCCTTACT+AGG | - | chr8.4:74922482-74922501 | None:intergenic | 20.0% |
| !! | TTGATGAACATGTTATTAAT+GGG | + | chr8.4:74921567-74921586 | MS.gene37345:intron | 20.0% |
| !! | TTTGATGAACATGTTATTAA+TGG | + | chr8.4:74921566-74921585 | MS.gene37345:intron | 20.0% |
| !!! | GTTGTTCTTTTTTCAATAAT+GGG | - | chr8.4:74922886-74922905 | None:intergenic | 20.0% |
| !!! | TGTTGTTCTTTTTTCAATAA+TGG | - | chr8.4:74922887-74922906 | None:intergenic | 20.0% |
| ! | AAAGTAAAGAGAAAGAGAAA+AGG | + | chr8.4:74922564-74922583 | MS.gene37345:intron | 25.0% |
| ! | AAATTATGAAGATCTTGTTG+AGG | - | chr8.4:74922863-74922882 | None:intergenic | 25.0% |
| ! | AAGAATGGAATTAGTGATTA+TGG | - | chr8.4:74922442-74922461 | None:intergenic | 25.0% |
| ! | ACCAAACATTTCATCAAATT+GGG | - | chr8.4:74923386-74923405 | None:intergenic | 25.0% |
| ! | ACTATATTTGACTCCTTAAT+CGG | + | chr8.4:74922295-74922314 | MS.gene37345:intron | 25.0% |
| ! | AGAATGGAATTAGTGATTAT+GGG | - | chr8.4:74922441-74922460 | None:intergenic | 25.0% |
| ! | ATTTCATTCATTTATGAAGG+TGG | + | chr8.4:74922089-74922108 | MS.gene37345:intron | 25.0% |
| ! | TAATCACTAATTCCATTCTT+TGG | + | chr8.4:74922442-74922461 | MS.gene37345:intron | 25.0% |
| !!! | AGGTTTCTCTTTTTTTTCAT+TGG | - | chr8.4:74921498-74921517 | None:intergenic | 25.0% |
| !!! | TTTTTTGCTAGTAAACTCTT+TGG | - | chr8.4:74921664-74921683 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCATTGGTTGAGT+TGG | - | chr8.4:74921489-74921508 | None:intergenic | 25.0% |
| AAAAGTGGAAATTCCTAGTA+AGG | + | chr8.4:74922466-74922485 | MS.gene37345:intron | 30.0% | |
| AATAATGTCTCTGGTAACTT+TGG | + | chr8.4:74923223-74923242 | MS.gene37345:CDS | 30.0% | |
| AATATGCTGTTCAATCTGAT+TGG | + | chr8.4:74921941-74921960 | MS.gene37345:CDS | 30.0% | |
| ACCCAATTTGATGAAATGTT+TGG | + | chr8.4:74923382-74923401 | MS.gene37345:CDS | 30.0% | |
| AGAGATGATCAACATTATGT+GGG | - | chr8.4:74922952-74922971 | None:intergenic | 30.0% | |
| AGAGTTTACTAGCAAAAAAC+AGG | + | chr8.4:74921665-74921684 | MS.gene37345:CDS | 30.0% | |
| CAATTTGATGAAATGTTTGG+TGG | + | chr8.4:74923385-74923404 | MS.gene37345:CDS | 30.0% | |
| CACCAAACATTTCATCAAAT+TGG | - | chr8.4:74923387-74923406 | None:intergenic | 30.0% | |
| CATTATTGAGAGAATCAACT+TGG | - | chr8.4:74923210-74923229 | None:intergenic | 30.0% | |
| CTTGTTGAGGATTATTGAAT+TGG | - | chr8.4:74922850-74922869 | None:intergenic | 30.0% | |
| TAAAGAGAAAGAGAAAAGGA+GGG | + | chr8.4:74922568-74922587 | MS.gene37345:intron | 30.0% | |
| TCAAGTTCAACAACAATACT+TGG | + | chr8.4:74921458-74921477 | MS.gene37345:CDS | 30.0% | |
| TGGGTCTTAATATTCATAGT+TGG | - | chr8.4:74923187-74923206 | None:intergenic | 30.0% | |
| ! | AAGTATTGTTGTTGAACTTG+AGG | - | chr8.4:74921459-74921478 | None:intergenic | 30.0% |
| ! | AGTATTGTTGTTGAACTTGA+GGG | - | chr8.4:74921458-74921477 | None:intergenic | 30.0% |
| ! | ATTCCATTCTTTGGAAAAAG+TGG | + | chr8.4:74922451-74922470 | MS.gene37345:intron | 30.0% |
| ! | ATTTAGTTTACCTTGAGAAG+AGG | - | chr8.4:74922020-74922039 | None:intergenic | 30.0% |
| ! | TTATGATGAGTTTTGCAGAA+GGG | + | chr8.4:74922676-74922695 | MS.gene37345:intron | 30.0% |
| ! | TTTAGTTTACCTTGAGAAGA+GGG | - | chr8.4:74922019-74922038 | None:intergenic | 30.0% |
| ! | TTTATGATGAGTTTTGCAGA+AGG | + | chr8.4:74922675-74922694 | MS.gene37345:intron | 30.0% |
| !!! | TAGGTTTTGAATTGTATCCT+AGG | + | chr8.4:74922115-74922134 | MS.gene37345:intron | 30.0% |
| !!! | TTTCCACTTTTTCCAAAGAA+TGG | - | chr8.4:74922457-74922476 | None:intergenic | 30.0% |
| AAAAAAAAGAGAAACCTCCC+TGG | + | chr8.4:74921501-74921520 | MS.gene37345:CDS | 35.0% | |
| AAAGCTCATTCCAAAACATG+TGG | + | chr8.4:74921964-74921983 | MS.gene37345:CDS | 35.0% | |
| AAGAAGGTTGAAAACAAACC+TGG | - | chr8.4:74921531-74921550 | None:intergenic | 35.0% | |
| AATCTTCAACTTCACAGAAG+AGG | + | chr8.4:74921730-74921749 | MS.gene37345:CDS | 35.0% | |
| AGAAGGTTGAAAACAAACCT+GGG | - | chr8.4:74921530-74921549 | None:intergenic | 35.0% | |
| AGAATGTCACTATGTGACAA+TGG | - | chr8.4:74923538-74923557 | None:intergenic | 35.0% | |
| AGAGAATATAGATGTGACTG+TGG | + | chr8.4:74921991-74922010 | MS.gene37345:CDS | 35.0% | |
| AGGTTTGACAAGAGATTTCT+TGG | + | chr8.4:74923504-74923523 | MS.gene37345:CDS | 35.0% | |
| ATATGTGAGATCTGCAACAA+AGG | + | chr8.4:74921691-74921710 | MS.gene37345:CDS | 35.0% | |
| ATCAATCTCAAAAGCCATCA+TGG | + | chr8.4:74923605-74923624 | MS.gene37345:CDS | 35.0% | |
| ATTGAGAGAATCAACTTGGT+GGG | - | chr8.4:74923206-74923225 | None:intergenic | 35.0% | |
| GAGAGATGATCAACATTATG+TGG | - | chr8.4:74922953-74922972 | None:intergenic | 35.0% | |
| GATTCTCTCAATAATGTCTC+TGG | + | chr8.4:74923214-74923233 | MS.gene37345:CDS | 35.0% | |
| GGTTTGACAAGAGATTTCTT+GGG | + | chr8.4:74923505-74923524 | MS.gene37345:CDS | 35.0% | |
| GTAAAGAGAAAGAGAAAAGG+AGG | + | chr8.4:74922567-74922586 | MS.gene37345:intron | 35.0% | |
| GTTTGACAAGAGATTTCTTG+GGG | + | chr8.4:74923506-74923525 | MS.gene37345:CDS | 35.0% | |
| TATGTGAGATCTGCAACAAA+GGG | + | chr8.4:74921692-74921711 | MS.gene37345:CDS | 35.0% | |
| TATTGAGAGAATCAACTTGG+TGG | - | chr8.4:74923207-74923226 | None:intergenic | 35.0% | |
| TCAAACTTAACTTCTGCATC+TGG | + | chr8.4:74921378-74921397 | MS.gene37345:CDS | 35.0% | |
| TCATGTTATCCAATGTCTCT+GGG | + | chr8.4:74922175-74922194 | MS.gene37345:intron | 35.0% | |
| TCATTTATGAAGGTGGTCAT+AGG | + | chr8.4:74922096-74922115 | MS.gene37345:intron | 35.0% | |
| TCTGGTAACAGAACTGAAAT+TGG | + | chr8.4:74921417-74921436 | MS.gene37345:CDS | 35.0% | |
| TGTTGTTGTGAGGGTAAAAT+TGG | - | chr8.4:74922779-74922798 | None:intergenic | 35.0% | |
| ! | AAGCACTTTTCCAGAAAACA+TGG | + | chr8.4:74921883-74921902 | MS.gene37345:CDS | 35.0% |
| ! | AGTGACATTCTAAGTATTGC+AGG | + | chr8.4:74923547-74923566 | MS.gene37345:CDS | 35.0% |
| ! | ATTCTAAGTATTGCAGGGAT+TGG | + | chr8.4:74923553-74923572 | MS.gene37345:CDS | 35.0% |
| ! | ATTGTATCCTAGGTTGACTT+TGG | + | chr8.4:74922125-74922144 | MS.gene37345:intron | 35.0% |
| ! | GTGACATTCTAAGTATTGCA+GGG | + | chr8.4:74923548-74923567 | MS.gene37345:CDS | 35.0% |
| ! | TCTAAAACAACCACCAATGA+CGG | + | chr8.4:74923457-74923476 | MS.gene37345:CDS | 35.0% |
| ! | TGATGAGAAGATGATGATGA+AGG | - | chr8.4:74922803-74922822 | None:intergenic | 35.0% |
| ! | TTTTCTTCTTCATCTCCTTC+TGG | + | chr8.4:74923349-74923368 | MS.gene37345:CDS | 35.0% |
| !! | AAGGTACTGTTTGGTAAGAA+GGG | - | chr8.4:74923081-74923100 | None:intergenic | 35.0% |
| !! | ATGATCCATCAAGAGCATTA+GGG | + | chr8.4:74921842-74921861 | MS.gene37345:CDS | 35.0% |
| !!! | TTTTTCATTGGTTGAGTTGG+AGG | - | chr8.4:74921486-74921505 | None:intergenic | 35.0% |
| AAAACAAACCTGGGTTACCA+GGG | - | chr8.4:74921521-74921540 | None:intergenic | 40.0% | |
| AAATCCCCTAATGCTCTTGA+TGG | - | chr8.4:74921850-74921869 | None:intergenic | 40.0% | |
| ACATGAACAAGACTAGGGTT+AGG | - | chr8.4:74923043-74923062 | None:intergenic | 40.0% | |
| CAGGAACATGAACAAGACTA+GGG | - | chr8.4:74923048-74923067 | None:intergenic | 40.0% | |
| CATGAACAAGACTAGGGTTA+GGG | - | chr8.4:74923042-74923061 | None:intergenic | 40.0% | |
| GAAAACATGGTGAGAAGAAG+TGG | + | chr8.4:74921896-74921915 | MS.gene37345:CDS | 40.0% | |
| GAAGAGGTCACAATTTACCA+TGG | + | chr8.4:74921746-74921765 | MS.gene37345:CDS | 40.0% | |
| GAAGTAGTTGCAGTAGTTGT+TGG | - | chr8.4:74923298-74923317 | None:intergenic | 40.0% | |
| GGTGCAACAATGAATAGAAC+TGG | + | chr8.4:74923148-74923167 | MS.gene37345:CDS | 40.0% | |
| GTCATGTTATCCAATGTCTC+TGG | + | chr8.4:74922174-74922193 | MS.gene37345:intron | 40.0% | |
| GTTCTTTGCTTCAACTTCCA+TGG | - | chr8.4:74921766-74921785 | None:intergenic | 40.0% | |
| TTATGCACCAAAGTCAACCT+AGG | - | chr8.4:74922135-74922154 | None:intergenic | 40.0% | |
| TTGCAGAAAGCAGCTCAAAT+GGG | + | chr8.4:74923127-74923146 | MS.gene37345:CDS | 40.0% | |
| ! | CTTCTTCTCACCATGTTTTC+TGG | - | chr8.4:74921896-74921915 | None:intergenic | 40.0% |
| ! | GATGAAGGTTGTTGTTGTGA+GGG | - | chr8.4:74922788-74922807 | None:intergenic | 40.0% |
| ! | TGATGAAGGTTGTTGTTGTG+AGG | - | chr8.4:74922789-74922808 | None:intergenic | 40.0% |
| ! | TTCTCTAGTGCCACATGTTT+TGG | - | chr8.4:74921977-74921996 | None:intergenic | 40.0% |
| !! | ACCTTTCTGAAATTCCACCT+TGG | + | chr8.4:74922921-74922940 | MS.gene37345:intron | 40.0% |
| !! | CATGATCCATCAAGAGCATT+AGG | + | chr8.4:74921841-74921860 | MS.gene37345:CDS | 40.0% |
| !! | GAAGGTACTGTTTGGTAAGA+AGG | - | chr8.4:74923082-74923101 | None:intergenic | 40.0% |
| !! | TGATCCATCAAGAGCATTAG+GGG | + | chr8.4:74921843-74921862 | MS.gene37345:CDS | 40.0% |
| !!! | CCTCTTTTGACTTCGTTAAC+CGG | - | chr8.4:74922204-74922223 | None:intergenic | 40.0% |
| AAAACAACCACCAATGACGG+CGG | + | chr8.4:74923460-74923479 | MS.gene37345:CDS | 45.0% | |
| ATAGCTATCACCTCAGCATC+AGG | - | chr8.4:74921637-74921656 | None:intergenic | 45.0% | |
| CAAGAGATTTCTTGGGGCTT+AGG | + | chr8.4:74923512-74923531 | MS.gene37345:CDS | 45.0% | |
| CCAGGAACATGAACAAGACT+AGG | - | chr8.4:74923049-74923068 | None:intergenic | 45.0% | |
| CCGGTTAACGAAGTCAAAAG+AGG | + | chr8.4:74922201-74922220 | MS.gene37345:intron | 45.0% | |
| GAAAACAAACCTGGGTTACC+AGG | - | chr8.4:74921522-74921541 | None:intergenic | 45.0% | |
| GCCAAGGTGGAATTTCAGAA+AGG | - | chr8.4:74922925-74922944 | None:intergenic | 45.0% | |
| GGATCATGATGCACACAAGT+TGG | - | chr8.4:74921829-74921848 | None:intergenic | 45.0% | |
| GGTGAAGCTAGTGTTTCTTC+TGG | + | chr8.4:74921399-74921418 | MS.gene37345:CDS | 45.0% | |
| GTTCCAACAGCAACAAGTAG+TGG | + | chr8.4:74921344-74921363 | MS.gene37345:CDS | 45.0% | |
| GTTGCAGAAAGCAGCTCAAA+TGG | + | chr8.4:74923126-74923145 | MS.gene37345:CDS | 45.0% | |
| TAGCTATCACCTCAGCATCA+GGG | - | chr8.4:74921636-74921655 | None:intergenic | 45.0% | |
| TCTCAAAAGCCATCATGGCA+AGG | + | chr8.4:74923610-74923629 | MS.gene37345:CDS | 45.0% | |
| TGGGTTGCTTCAAATCCAGA+AGG | - | chr8.4:74923367-74923386 | None:intergenic | 45.0% | |
| TGTTTGGTAAGAAGGGAGTG+TGG | - | chr8.4:74923074-74923093 | None:intergenic | 45.0% | |
| ! | AGAGCATTAGGGGATTTGAC+TGG | + | chr8.4:74921853-74921872 | MS.gene37345:CDS | 45.0% |
| ! | CTTCCACTACTTGTTGCTGT+TGG | - | chr8.4:74921350-74921369 | None:intergenic | 45.0% |
| ! | GTTTGGTAAGAAGGGAGTGT+GGG | - | chr8.4:74923073-74923092 | None:intergenic | 45.0% |
| ! | TCTGAAATTCCACCTTGGCT+TGG | + | chr8.4:74922926-74922945 | MS.gene37345:intron | 45.0% |
| ! | TGACTCCTTAATCGGTGTTC+CGG | + | chr8.4:74922303-74922322 | MS.gene37345:intron | 45.0% |
| !! | CCTAGTCTTGTTCATGTTCC+TGG | + | chr8.4:74923046-74923065 | MS.gene37345:intron | 45.0% |
| !! | TGATGCACACAAGTTGGTTC+TGG | - | chr8.4:74921823-74921842 | None:intergenic | 45.0% |
| !! | TGTGAGCTGAAGGTACTGTT+TGG | - | chr8.4:74923090-74923109 | None:intergenic | 45.0% |
| !! | TTTTTCAGACCCTGATGCTG+AGG | + | chr8.4:74921624-74921643 | MS.gene37345:intron | 45.0% |
| !! | ATAAATACATTATTAATATT+AGG | + | chr8.4:74922151-74922170 | MS.gene37345:intron | 5.0% |
| !! | TAAATACATTATTAATATTA+GGG | + | chr8.4:74922152-74922171 | MS.gene37345:intron | 5.0% |
| ACATTATGTGGGCCAAGCCA+AGG | - | chr8.4:74922941-74922960 | None:intergenic | 50.0% | |
| ACTGTGGAACCCTCTTCTCA+AGG | + | chr8.4:74922007-74922026 | MS.gene37345:CDS | 50.0% | |
| GGAAATGCTAGTAGTGTCCC+CGG | - | chr8.4:74922325-74922344 | None:intergenic | 50.0% | |
| GTAGCTGACATGTGAGCTGA+AGG | - | chr8.4:74923100-74923119 | None:intergenic | 50.0% | |
| ! | ACTCCTTAATCGGTGTTCCG+GGG | + | chr8.4:74922305-74922324 | MS.gene37345:intron | 50.0% |
| ! | GACTCCTTAATCGGTGTTCC+GGG | + | chr8.4:74922304-74922323 | MS.gene37345:intron | 50.0% |
| !! | ATCCAATGTCTCTGGGACAC+CGG | + | chr8.4:74922182-74922201 | MS.gene37345:intron | 50.0% |
| AACCGGTGTCCCAGAGACAT+TGG | - | chr8.4:74922187-74922206 | None:intergenic | 55.0% | |
| ACAAACCTGGGTTACCAGGG+AGG | - | chr8.4:74921518-74921537 | None:intergenic | 55.0% | |
| AGAAACCTCCCTGGTAACCC+AGG | + | chr8.4:74921510-74921529 | MS.gene37345:CDS | 55.0% | |
| TTATGTGGGCCAAGCCAAGG+TGG | - | chr8.4:74922938-74922957 | None:intergenic | 55.0% | |
| ! | TAAGAAGGGAGTGTGGGTCC+AGG | - | chr8.4:74923067-74923086 | None:intergenic | 55.0% |
| ! | TGTCCCCGGAACACCGATTA+AGG | - | chr8.4:74922311-74922330 | None:intergenic | 55.0% |
| ACAACCACCAATGACGGCGG+CGG | + | chr8.4:74923463-74923482 | MS.gene37345:CDS | 60.0% | |
| !! | GGCGGCGGTGGTGGAAATGA+AGG | + | chr8.4:74923484-74923503 | MS.gene37345:CDS | 65.0% |
| ACCACCAATGACGGCGGCGG+CGG | + | chr8.4:74923466-74923485 | MS.gene37345:CDS | 70.0% | |
| ACCAATGACGGCGGCGGCGG+CGG | + | chr8.4:74923469-74923488 | MS.gene37345:CDS | 75.0% | |
| ! | AATGACGGCGGCGGCGGCGG+TGG | + | chr8.4:74923472-74923491 | MS.gene37345:CDS | 80.0% |
| ! | ACCGCCGCCGCCGCCGTCAT+TGG | - | chr8.4:74923473-74923492 | None:intergenic | 80.0% |
| ! | GCCGCCGCCGCCGTCATTGG+TGG | - | chr8.4:74923470-74923489 | None:intergenic | 80.0% |
| ! | GACGGCGGCGGCGGCGGTGG+TGG | + | chr8.4:74923475-74923494 | MS.gene37345:CDS | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 74921324 | 74923636 | 74921324 | ID=MS.gene37345 |
| chr8.4 | mRNA | 74921324 | 74923636 | 74921324 | ID=MS.gene37345.t1;Parent=MS.gene37345 |
| chr8.4 | exon | 74921324 | 74921531 | 74921324 | ID=MS.gene37345.t1.exon1;Parent=MS.gene37345.t1 |
| chr8.4 | CDS | 74921324 | 74921531 | 74921324 | ID=cds.MS.gene37345.t1;Parent=MS.gene37345.t1 |
| chr8.4 | exon | 74921632 | 74922028 | 74921632 | ID=MS.gene37345.t1.exon2;Parent=MS.gene37345.t1 |
| chr8.4 | CDS | 74921632 | 74922028 | 74921632 | ID=cds.MS.gene37345.t1;Parent=MS.gene37345.t1 |
| chr8.4 | exon | 74923051 | 74923636 | 74923051 | ID=MS.gene37345.t1.exon3;Parent=MS.gene37345.t1 |
| chr8.4 | CDS | 74923051 | 74923636 | 74923051 | ID=cds.MS.gene37345.t1;Parent=MS.gene37345.t1 |
| Gene Sequence |
| Protein sequence |
