Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42005.t1 | XP_013452038.1 | 95.4 | 348 | 16 | 0 | 1 | 348 | 1 | 348 | 1.50E-188 | 668.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42005.t1 | Q96520 | 45.3 | 329 | 175 | 3 | 23 | 348 | 31 | 357 | 3.1e-78 | 293.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42005.t1 | A0A072U9H8 | 95.4 | 348 | 16 | 0 | 1 | 348 | 1 | 348 | 1.1e-188 | 668.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04925 | MS.gene42005 | 0.820315 | 7.32E-53 | -1.69E-46 |
| MS.gene04926 | MS.gene42005 | 0.817319 | 3.51E-52 | -1.69E-46 |
| MS.gene04932 | MS.gene42005 | 0.844751 | 6.23E-59 | -1.69E-46 |
| MS.gene049549 | MS.gene42005 | 0.853348 | 2.54E-61 | -1.69E-46 |
| MS.gene049813 | MS.gene42005 | 0.835358 | 1.76E-56 | -1.69E-46 |
| MS.gene050344 | MS.gene42005 | 0.81973 | 9.96E-53 | -1.69E-46 |
| MS.gene05104 | MS.gene42005 | 0.80005 | 1.73E-48 | -1.69E-46 |
| MS.gene051131 | MS.gene42005 | 0.827388 | 1.61E-54 | -1.69E-46 |
| MS.gene052211 | MS.gene42005 | 0.858839 | 6.25E-63 | -1.69E-46 |
| MS.gene052212 | MS.gene42005 | 0.8116 | 6.46E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene42005 | -0.800716 | 1.27E-48 | -1.69E-46 |
| MS.gene05240 | MS.gene42005 | 0.867699 | 1.13E-65 | -1.69E-46 |
| MS.gene052606 | MS.gene42005 | 0.805017 | 1.64E-49 | -1.69E-46 |
| MS.gene052702 | MS.gene42005 | 0.826298 | 2.93E-54 | -1.69E-46 |
| MS.gene052705 | MS.gene42005 | 0.821135 | 4.74E-53 | -1.69E-46 |
| MS.gene052706 | MS.gene42005 | 0.81219 | 4.80E-51 | -1.69E-46 |
| MS.gene053406 | MS.gene42005 | 0.803434 | 3.49E-49 | -1.69E-46 |
| MS.gene053887 | MS.gene42005 | 0.824177 | 9.30E-54 | -1.69E-46 |
| MS.gene054138 | MS.gene42005 | 0.802721 | 4.91E-49 | -1.69E-46 |
| MS.gene054146 | MS.gene42005 | 0.839192 | 1.84E-57 | -1.69E-46 |
| MS.gene054147 | MS.gene42005 | 0.810796 | 9.64E-51 | -1.69E-46 |
| MS.gene054181 | MS.gene42005 | 0.812537 | 4.03E-51 | -1.69E-46 |
| MS.gene054277 | MS.gene42005 | 0.904406 | 1.27E-79 | -1.69E-46 |
| MS.gene054742 | MS.gene42005 | 0.870004 | 2.02E-66 | -1.69E-46 |
| MS.gene05483 | MS.gene42005 | 0.834863 | 2.34E-56 | -1.69E-46 |
| MS.gene055215 | MS.gene42005 | 0.834306 | 3.24E-56 | -1.69E-46 |
| MS.gene055240 | MS.gene42005 | 0.818411 | 1.99E-52 | -1.69E-46 |
| MS.gene055977 | MS.gene42005 | 0.808588 | 2.88E-50 | -1.69E-46 |
| MS.gene056076 | MS.gene42005 | 0.800072 | 1.71E-48 | -1.69E-46 |
| MS.gene056330 | MS.gene42005 | 0.827901 | 1.21E-54 | -1.69E-46 |
| MS.gene056590 | MS.gene42005 | 0.843326 | 1.50E-58 | -1.69E-46 |
| MS.gene056591 | MS.gene42005 | 0.842665 | 2.25E-58 | -1.69E-46 |
| MS.gene056697 | MS.gene42005 | 0.821356 | 4.22E-53 | -1.69E-46 |
| MS.gene056715 | MS.gene42005 | 0.841503 | 4.57E-58 | -1.69E-46 |
| MS.gene056748 | MS.gene42005 | 0.806889 | 6.61E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene42005 | 0.802756 | 4.82E-49 | -1.69E-46 |
| MS.gene056920 | MS.gene42005 | 0.888641 | 4.93E-73 | -1.69E-46 |
| MS.gene056922 | MS.gene42005 | 0.852746 | 3.77E-61 | -1.69E-46 |
| MS.gene056923 | MS.gene42005 | 0.816566 | 5.18E-52 | -1.69E-46 |
| MS.gene056924 | MS.gene42005 | 0.801838 | 7.45E-49 | -1.69E-46 |
| MS.gene057261 | MS.gene42005 | 0.855265 | 7.08E-62 | -1.69E-46 |
| MS.gene057544 | MS.gene42005 | 0.824748 | 6.82E-54 | -1.69E-46 |
| MS.gene057548 | MS.gene42005 | 0.815229 | 1.03E-51 | -1.69E-46 |
| MS.gene057550 | MS.gene42005 | 0.804979 | 1.67E-49 | -1.69E-46 |
| MS.gene058099 | MS.gene42005 | 0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene058177 | MS.gene42005 | 0.801177 | 1.02E-48 | -1.69E-46 |
| MS.gene058178 | MS.gene42005 | 0.804716 | 1.89E-49 | -1.69E-46 |
| MS.gene058381 | MS.gene42005 | 0.885281 | 9.31E-72 | -1.69E-46 |
| MS.gene058450 | MS.gene42005 | 0.855361 | 6.64E-62 | -1.69E-46 |
| MS.gene058603 | MS.gene42005 | 0.807609 | 4.65E-50 | -1.69E-46 |
| MS.gene059039 | MS.gene42005 | 0.816294 | 5.96E-52 | -1.69E-46 |
| MS.gene059060 | MS.gene42005 | 0.808416 | 3.13E-50 | -1.69E-46 |
| MS.gene059328 | MS.gene42005 | 0.801215 | 1.00E-48 | -1.69E-46 |
| MS.gene059953 | MS.gene42005 | 0.842655 | 2.27E-58 | -1.69E-46 |
| MS.gene059955 | MS.gene42005 | 0.848069 | 7.75E-60 | -1.69E-46 |
| MS.gene060087 | MS.gene42005 | 0.871731 | 5.47E-67 | -1.69E-46 |
| MS.gene060358 | MS.gene42005 | 0.822553 | 2.23E-53 | -1.69E-46 |
| MS.gene060593 | MS.gene42005 | 0.820966 | 5.19E-53 | -1.69E-46 |
| MS.gene061038 | MS.gene42005 | 0.813734 | 2.20E-51 | -1.69E-46 |
| MS.gene061092 | MS.gene42005 | 0.817844 | 2.67E-52 | -1.69E-46 |
| MS.gene061094 | MS.gene42005 | 0.818852 | 1.58E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42005.t1 | MTR_6g043460 | 95.402 | 348 | 16 | 0 | 1 | 348 | 1 | 348 | 0.0 | 672 |
| MS.gene42005.t1 | MTR_6g043240 | 55.398 | 352 | 147 | 3 | 1 | 345 | 1 | 349 | 4.02e-138 | 396 |
| MS.gene42005.t1 | MTR_6g043280 | 52.648 | 321 | 151 | 1 | 10 | 330 | 15 | 334 | 2.19e-121 | 353 |
| MS.gene42005.t1 | MTR_5g058120 | 75.926 | 162 | 35 | 1 | 171 | 332 | 6 | 163 | 2.98e-84 | 256 |
| MS.gene42005.t1 | MTR_2g029750 | 42.547 | 322 | 170 | 7 | 35 | 343 | 28 | 347 | 1.63e-75 | 237 |
| MS.gene42005.t1 | MTR_2g029820 | 43.189 | 301 | 158 | 6 | 35 | 324 | 28 | 326 | 1.53e-74 | 234 |
| MS.gene42005.t1 | MTR_4g087965 | 39.535 | 344 | 186 | 8 | 1 | 324 | 1 | 342 | 4.06e-74 | 233 |
| MS.gene42005.t1 | MTR_1g077000 | 41.869 | 289 | 164 | 2 | 36 | 324 | 39 | 323 | 4.56e-74 | 232 |
| MS.gene42005.t1 | MTR_2g029815 | 41.830 | 306 | 163 | 7 | 31 | 324 | 24 | 326 | 3.38e-72 | 228 |
| MS.gene42005.t1 | MTR_7g029030 | 38.941 | 321 | 183 | 5 | 8 | 324 | 5 | 316 | 4.37e-72 | 227 |
| MS.gene42005.t1 | MTR_3g072190 | 38.854 | 314 | 188 | 4 | 13 | 324 | 3 | 314 | 1.31e-71 | 226 |
| MS.gene42005.t1 | MTR_7g086870 | 41.869 | 289 | 165 | 2 | 36 | 324 | 22 | 307 | 1.17e-70 | 223 |
| MS.gene42005.t1 | MTR_2g028980 | 42.949 | 312 | 163 | 8 | 35 | 334 | 28 | 336 | 1.32e-70 | 224 |
| MS.gene42005.t1 | MTR_4g029200 | 40.476 | 336 | 186 | 6 | 1 | 324 | 1 | 334 | 9.82e-70 | 221 |
| MS.gene42005.t1 | MTR_3g094650 | 37.952 | 332 | 192 | 5 | 1 | 328 | 1 | 322 | 2.44e-69 | 220 |
| MS.gene42005.t1 | MTR_2g029560 | 41.528 | 301 | 163 | 6 | 35 | 324 | 23 | 321 | 4.39e-69 | 220 |
| MS.gene42005.t1 | MTR_2g029740 | 41.158 | 311 | 170 | 6 | 35 | 334 | 28 | 336 | 7.44e-69 | 219 |
| MS.gene42005.t1 | MTR_4g132490 | 36.760 | 321 | 193 | 5 | 12 | 324 | 5 | 323 | 2.44e-68 | 218 |
| MS.gene42005.t1 | MTR_1g090760 | 39.934 | 303 | 164 | 7 | 36 | 324 | 28 | 326 | 2.86e-68 | 218 |
| MS.gene42005.t1 | MTR_8g062780 | 38.065 | 310 | 181 | 4 | 30 | 329 | 17 | 325 | 3.46e-68 | 217 |
| MS.gene42005.t1 | MTR_2g029830 | 38.485 | 330 | 185 | 7 | 35 | 348 | 27 | 354 | 4.07e-68 | 218 |
| MS.gene42005.t1 | MTR_7g072510 | 39.384 | 292 | 173 | 4 | 35 | 324 | 19 | 308 | 1.24e-67 | 215 |
| MS.gene42005.t1 | MTR_1g086320 | 38.438 | 333 | 181 | 8 | 9 | 328 | 12 | 333 | 1.32e-67 | 216 |
| MS.gene42005.t1 | MTR_0155s0040 | 38.225 | 293 | 169 | 3 | 36 | 324 | 27 | 311 | 1.94e-67 | 214 |
| MS.gene42005.t1 | MTR_4g029190 | 41.867 | 332 | 172 | 8 | 1 | 324 | 18 | 336 | 2.35e-67 | 215 |
| MS.gene42005.t1 | MTR_5g017860 | 39.803 | 304 | 172 | 4 | 30 | 324 | 21 | 322 | 2.62e-67 | 215 |
| MS.gene42005.t1 | MTR_2g029730 | 39.936 | 313 | 173 | 7 | 35 | 335 | 24 | 333 | 4.23e-67 | 215 |
| MS.gene42005.t1 | MTR_2g029910 | 42.715 | 302 | 159 | 6 | 35 | 324 | 29 | 328 | 4.86e-67 | 215 |
| MS.gene42005.t1 | MTR_5g083860 | 35.976 | 328 | 197 | 5 | 5 | 328 | 7 | 325 | 5.01e-67 | 214 |
| MS.gene42005.t1 | MTR_2g029850 | 39.688 | 320 | 180 | 6 | 35 | 343 | 28 | 345 | 5.04e-67 | 215 |
| MS.gene42005.t1 | MTR_1g054205 | 39.610 | 308 | 168 | 8 | 31 | 324 | 19 | 322 | 6.77e-67 | 214 |
| MS.gene42005.t1 | MTR_2g029800 | 38.870 | 301 | 171 | 6 | 35 | 324 | 28 | 326 | 8.50e-67 | 214 |
| MS.gene42005.t1 | MTR_5g021060 | 39.130 | 299 | 172 | 5 | 40 | 329 | 34 | 331 | 1.99e-66 | 213 |
| MS.gene42005.t1 | MTR_1g038680 | 38.514 | 296 | 171 | 4 | 40 | 324 | 33 | 328 | 8.01e-66 | 211 |
| MS.gene42005.t1 | MTR_5g022870 | 38.796 | 299 | 168 | 6 | 34 | 324 | 21 | 312 | 1.58e-65 | 210 |
| MS.gene42005.t1 | MTR_2g029860 | 39.628 | 323 | 180 | 7 | 30 | 340 | 23 | 342 | 1.78e-65 | 211 |
| MS.gene42005.t1 | MTR_8g075100 | 39.731 | 297 | 164 | 6 | 36 | 324 | 26 | 315 | 4.74e-65 | 209 |
| MS.gene42005.t1 | MTR_4g127670 | 40.132 | 304 | 169 | 5 | 35 | 328 | 23 | 323 | 5.21e-65 | 209 |
| MS.gene42005.t1 | MTR_2g084080 | 39.041 | 292 | 174 | 4 | 35 | 324 | 24 | 313 | 5.43e-65 | 208 |
| MS.gene42005.t1 | MTR_5g017850 | 38.636 | 308 | 178 | 4 | 30 | 328 | 21 | 326 | 6.52e-65 | 209 |
| MS.gene42005.t1 | MTR_4g046713 | 34.146 | 328 | 198 | 6 | 6 | 324 | 4 | 322 | 6.52e-65 | 209 |
| MS.gene42005.t1 | MTR_4g095450 | 38.983 | 295 | 175 | 4 | 35 | 324 | 26 | 320 | 8.18e-65 | 208 |
| MS.gene42005.t1 | MTR_1g009750 | 38.333 | 300 | 174 | 5 | 35 | 324 | 26 | 324 | 1.14e-64 | 208 |
| MS.gene42005.t1 | MTR_5g014100 | 39.344 | 305 | 166 | 7 | 36 | 324 | 26 | 327 | 1.28e-64 | 208 |
| MS.gene42005.t1 | MTR_2g008710 | 39.667 | 300 | 165 | 5 | 40 | 328 | 31 | 325 | 4.84e-64 | 206 |
| MS.gene42005.t1 | MTR_2g084110 | 36.909 | 317 | 188 | 5 | 10 | 324 | 7 | 313 | 7.02e-64 | 206 |
| MS.gene42005.t1 | MTR_3g092990 | 38.284 | 303 | 175 | 5 | 32 | 324 | 22 | 322 | 1.39e-63 | 205 |
| MS.gene42005.t1 | MTR_1g086490 | 37.464 | 347 | 185 | 8 | 2 | 328 | 6 | 340 | 1.57e-63 | 206 |
| MS.gene42005.t1 | MTR_3g094670 | 37.126 | 334 | 192 | 6 | 1 | 328 | 1 | 322 | 1.58e-63 | 205 |
| MS.gene42005.t1 | MTR_4g122640 | 39.057 | 297 | 171 | 6 | 36 | 324 | 38 | 332 | 2.55e-63 | 205 |
| MS.gene42005.t1 | MTR_7g072480 | 38.851 | 296 | 177 | 4 | 35 | 328 | 23 | 316 | 3.89e-63 | 204 |
| MS.gene42005.t1 | MTR_5g074970 | 36.446 | 332 | 193 | 7 | 1 | 324 | 1 | 322 | 1.28e-62 | 202 |
| MS.gene42005.t1 | MTR_2g084090 | 38.408 | 289 | 173 | 4 | 39 | 324 | 28 | 314 | 1.72e-62 | 202 |
| MS.gene42005.t1 | MTR_4g029170 | 38.047 | 297 | 178 | 5 | 36 | 328 | 27 | 321 | 2.30e-62 | 202 |
| MS.gene42005.t1 | MTR_6g027440 | 37.049 | 305 | 181 | 4 | 30 | 328 | 15 | 314 | 3.09e-62 | 201 |
| MS.gene42005.t1 | MTR_7g107520 | 36.111 | 324 | 189 | 9 | 14 | 328 | 6 | 320 | 3.86e-62 | 201 |
| MS.gene42005.t1 | MTR_8g076820 | 37.838 | 296 | 170 | 6 | 40 | 324 | 34 | 326 | 9.56e-62 | 201 |
| MS.gene42005.t1 | MTR_5g016010 | 35.913 | 323 | 196 | 5 | 12 | 324 | 4 | 325 | 1.79e-61 | 200 |
| MS.gene42005.t1 | MTR_3g105790 | 36.418 | 335 | 190 | 6 | 4 | 328 | 1 | 322 | 2.71e-61 | 199 |
| MS.gene42005.t1 | MTR_4g030890 | 37.000 | 300 | 175 | 7 | 40 | 330 | 104 | 398 | 2.89e-61 | 202 |
| MS.gene42005.t1 | MTR_2g088770 | 36.393 | 305 | 181 | 7 | 35 | 329 | 25 | 326 | 3.02e-61 | 199 |
| MS.gene42005.t1 | MTR_2g040000 | 37.963 | 324 | 181 | 8 | 14 | 324 | 11 | 327 | 5.09e-61 | 199 |
| MS.gene42005.t1 | MTR_4g031140 | 36.275 | 306 | 181 | 7 | 40 | 336 | 32 | 332 | 8.91e-61 | 198 |
| MS.gene42005.t1 | MTR_2g437770 | 37.162 | 296 | 171 | 6 | 36 | 324 | 50 | 337 | 1.24e-60 | 198 |
| MS.gene42005.t1 | MTR_1g066380 | 33.445 | 299 | 191 | 4 | 32 | 324 | 23 | 319 | 1.78e-60 | 197 |
| MS.gene42005.t1 | MTR_4g114210 | 39.404 | 302 | 166 | 5 | 35 | 324 | 20 | 316 | 4.20e-60 | 196 |
| MS.gene42005.t1 | MTR_4g125940 | 38.079 | 302 | 172 | 6 | 35 | 324 | 27 | 325 | 5.67e-60 | 196 |
| MS.gene42005.t1 | MTR_1g025980 | 35.826 | 321 | 187 | 6 | 12 | 324 | 5 | 314 | 6.58e-60 | 195 |
| MS.gene42005.t1 | MTR_7g086820 | 37.582 | 306 | 181 | 5 | 30 | 330 | 14 | 314 | 8.52e-60 | 195 |
| MS.gene42005.t1 | MTR_3g466200 | 37.627 | 295 | 177 | 4 | 35 | 324 | 24 | 316 | 9.10e-60 | 195 |
| MS.gene42005.t1 | MTR_3g094630 | 37.126 | 334 | 192 | 7 | 1 | 328 | 1 | 322 | 1.13e-59 | 195 |
| MS.gene42005.t1 | MTR_1g115900 | 38.225 | 293 | 175 | 5 | 36 | 324 | 27 | 317 | 1.44e-59 | 195 |
| MS.gene42005.t1 | MTR_7g093370 | 37.255 | 306 | 178 | 7 | 31 | 324 | 64 | 367 | 2.44e-59 | 196 |
| MS.gene42005.t1 | MTR_3g466180 | 37.421 | 318 | 184 | 6 | 10 | 324 | 14 | 319 | 4.39e-59 | 193 |
| MS.gene42005.t1 | MTR_2g084020 | 35.220 | 318 | 193 | 6 | 10 | 324 | 7 | 314 | 7.91e-59 | 192 |
| MS.gene42005.t1 | MTR_4g133800 | 38.832 | 291 | 164 | 5 | 41 | 324 | 46 | 329 | 2.79e-58 | 192 |
| MS.gene42005.t1 | MTR_4g132110 | 34.564 | 298 | 187 | 4 | 39 | 330 | 35 | 330 | 3.49e-58 | 191 |
| MS.gene42005.t1 | MTR_1g022970 | 38.796 | 299 | 172 | 5 | 36 | 324 | 46 | 343 | 4.42e-58 | 191 |
| MS.gene42005.t1 | MTR_0286s0010 | 36.120 | 299 | 181 | 5 | 35 | 324 | 33 | 330 | 1.03e-57 | 190 |
| MS.gene42005.t1 | MTR_6g008075 | 36.120 | 299 | 181 | 5 | 35 | 324 | 33 | 330 | 1.03e-57 | 190 |
| MS.gene42005.t1 | MTR_4g083710 | 37.576 | 330 | 182 | 8 | 10 | 328 | 8 | 324 | 1.72e-57 | 189 |
| MS.gene42005.t1 | MTR_5g049280 | 37.954 | 303 | 174 | 7 | 35 | 324 | 32 | 333 | 4.71e-57 | 189 |
| MS.gene42005.t1 | MTR_2g084010 | 37.370 | 289 | 176 | 5 | 39 | 324 | 28 | 314 | 6.12e-57 | 187 |
| MS.gene42005.t1 | MTR_4g132110 | 34.323 | 303 | 186 | 5 | 39 | 330 | 35 | 335 | 6.16e-57 | 188 |
| MS.gene42005.t1 | MTR_4g074995 | 37.874 | 301 | 165 | 6 | 35 | 328 | 23 | 308 | 2.52e-56 | 186 |
| MS.gene42005.t1 | MTR_1g066640 | 32.770 | 296 | 191 | 4 | 35 | 324 | 26 | 319 | 3.14e-56 | 186 |
| MS.gene42005.t1 | MTR_7g026990 | 32.710 | 321 | 208 | 5 | 6 | 324 | 4 | 318 | 5.02e-56 | 186 |
| MS.gene42005.t1 | MTR_2g084000 | 36.177 | 293 | 182 | 5 | 35 | 324 | 25 | 315 | 5.57e-56 | 185 |
| MS.gene42005.t1 | MTR_2g029830 | 38.732 | 284 | 156 | 7 | 81 | 348 | 5 | 286 | 9.82e-56 | 184 |
| MS.gene42005.t1 | MTR_1g066680 | 34.122 | 296 | 186 | 5 | 35 | 324 | 26 | 318 | 1.25e-55 | 184 |
| MS.gene42005.t1 | MTR_1g101830 | 34.139 | 331 | 198 | 5 | 1 | 324 | 1 | 318 | 1.90e-55 | 184 |
| MS.gene42005.t1 | MTR_2g099175 | 34.218 | 339 | 201 | 7 | 7 | 328 | 2 | 335 | 2.07e-55 | 184 |
| MS.gene42005.t1 | MTR_2g067440 | 35.780 | 327 | 169 | 6 | 36 | 324 | 60 | 383 | 3.18e-55 | 185 |
| MS.gene42005.t1 | MTR_1g066710 | 32.997 | 297 | 189 | 5 | 35 | 324 | 26 | 319 | 3.95e-55 | 183 |
| MS.gene42005.t1 | MTR_1g009750 | 35.906 | 298 | 167 | 6 | 35 | 324 | 26 | 307 | 4.32e-55 | 182 |
| MS.gene42005.t1 | MTR_3g072190 | 40.650 | 246 | 142 | 4 | 81 | 324 | 4 | 247 | 8.67e-55 | 180 |
| MS.gene42005.t1 | MTR_4g029180 | 35.374 | 294 | 184 | 5 | 39 | 328 | 30 | 321 | 2.02e-54 | 181 |
| MS.gene42005.t1 | MTR_2g078610 | 35.258 | 329 | 171 | 6 | 36 | 324 | 76 | 402 | 2.14e-54 | 184 |
| MS.gene42005.t1 | MTR_2g077990 | 35.258 | 329 | 171 | 6 | 36 | 324 | 76 | 402 | 2.85e-54 | 183 |
| MS.gene42005.t1 | MTR_3g092990 | 36.304 | 303 | 170 | 6 | 32 | 324 | 22 | 311 | 3.85e-54 | 180 |
| MS.gene42005.t1 | MTR_4g074990 | 37.377 | 305 | 158 | 8 | 35 | 328 | 23 | 305 | 1.11e-52 | 176 |
| MS.gene42005.t1 | MTR_4g125940 | 38.951 | 267 | 148 | 6 | 70 | 324 | 7 | 270 | 3.59e-52 | 174 |
| MS.gene42005.t1 | MTR_5g074760 | 34.462 | 325 | 196 | 8 | 7 | 324 | 3 | 317 | 2.40e-51 | 173 |
| MS.gene42005.t1 | MTR_3g467600 | 36.391 | 327 | 179 | 12 | 11 | 324 | 10 | 320 | 1.71e-49 | 169 |
| MS.gene42005.t1 | MTR_5g074740 | 34.154 | 325 | 197 | 8 | 7 | 324 | 3 | 317 | 3.13e-49 | 168 |
| MS.gene42005.t1 | MTR_5g074860 | 35.077 | 325 | 189 | 11 | 10 | 324 | 9 | 321 | 6.99e-49 | 167 |
| MS.gene42005.t1 | MTR_2g078280 | 34.483 | 319 | 167 | 6 | 36 | 314 | 76 | 392 | 1.53e-48 | 168 |
| MS.gene42005.t1 | MTR_1g066380 | 34.800 | 250 | 155 | 4 | 81 | 324 | 4 | 251 | 4.11e-48 | 163 |
| MS.gene42005.t1 | MTR_5g074710 | 33.887 | 301 | 189 | 7 | 31 | 324 | 20 | 317 | 2.54e-46 | 160 |
| MS.gene42005.t1 | MTR_2g008160 | 33.770 | 305 | 187 | 5 | 35 | 328 | 23 | 323 | 5.88e-45 | 157 |
| MS.gene42005.t1 | MTR_5g033470 | 33.117 | 308 | 190 | 7 | 35 | 328 | 72 | 377 | 1.11e-44 | 157 |
| MS.gene42005.t1 | MTR_4g074980 | 39.241 | 237 | 126 | 7 | 35 | 260 | 24 | 253 | 1.54e-44 | 154 |
| MS.gene42005.t1 | MTR_4g074980 | 34.783 | 299 | 162 | 9 | 35 | 328 | 24 | 294 | 1.62e-44 | 155 |
| MS.gene42005.t1 | MTR_0147s0010 | 34.069 | 317 | 166 | 6 | 36 | 324 | 77 | 378 | 3.65e-44 | 156 |
| MS.gene42005.t1 | MTR_2g008730 | 34.000 | 300 | 158 | 5 | 40 | 328 | 31 | 301 | 4.32e-44 | 154 |
| MS.gene42005.t1 | MTR_2g067450 | 34.426 | 305 | 175 | 9 | 36 | 324 | 11 | 306 | 5.92e-44 | 154 |
| MS.gene42005.t1 | MTR_3g105790 | 39.035 | 228 | 129 | 3 | 111 | 328 | 19 | 246 | 1.40e-42 | 148 |
| MS.gene42005.t1 | MTR_2g029880 | 39.459 | 185 | 94 | 5 | 149 | 324 | 9 | 184 | 2.98e-33 | 122 |
| MS.gene42005.t1 | MTR_3g072210 | 39.037 | 187 | 109 | 5 | 146 | 328 | 53 | 238 | 5.61e-33 | 123 |
| MS.gene42005.t1 | MTR_2g008160 | 29.667 | 300 | 171 | 5 | 35 | 328 | 23 | 288 | 2.09e-32 | 122 |
| MS.gene42005.t1 | MTR_5g074860 | 30.887 | 327 | 161 | 14 | 10 | 324 | 9 | 282 | 2.51e-31 | 120 |
| MS.gene42005.t1 | MTR_5g074700 | 35.160 | 219 | 125 | 6 | 110 | 324 | 5 | 210 | 1.76e-30 | 115 |
| MS.gene42005.t1 | MTR_1g098320 | 53.608 | 97 | 44 | 1 | 249 | 344 | 45 | 141 | 9.29e-28 | 106 |
| MS.gene42005.t1 | MTR_2g008160 | 34.831 | 178 | 112 | 2 | 35 | 212 | 23 | 196 | 2.83e-27 | 107 |
| MS.gene42005.t1 | MTR_7g072490 | 33.480 | 227 | 95 | 5 | 82 | 307 | 2 | 173 | 3.64e-26 | 103 |
| MS.gene42005.t1 | MTR_3g072260 | 38.931 | 131 | 77 | 2 | 14 | 144 | 6 | 133 | 5.61e-24 | 96.3 |
| MS.gene42005.t1 | MTR_2g078560 | 30.093 | 216 | 112 | 4 | 148 | 324 | 101 | 316 | 3.01e-22 | 95.9 |
| MS.gene42005.t1 | MTR_7g086790 | 31.915 | 188 | 113 | 5 | 83 | 270 | 17 | 189 | 1.94e-16 | 77.0 |
| MS.gene42005.t1 | MTR_4g114220 | 47.059 | 85 | 34 | 2 | 60 | 144 | 27 | 100 | 5.12e-16 | 74.3 |
| MS.gene42005.t1 | MTR_2g077980 | 26.838 | 272 | 152 | 7 | 98 | 324 | 11 | 280 | 6.99e-16 | 77.4 |
| MS.gene42005.t1 | MTR_4g012865 | 51.562 | 64 | 31 | 0 | 36 | 99 | 77 | 140 | 1.99e-15 | 73.2 |
| MS.gene42005.t1 | MTR_4g031040 | 37.500 | 120 | 62 | 4 | 145 | 262 | 23 | 131 | 2.24e-14 | 69.7 |
| MS.gene42005.t1 | MTR_7g107500 | 40.449 | 89 | 52 | 1 | 236 | 324 | 6 | 93 | 1.07e-13 | 66.6 |
| MS.gene42005.t1 | MTR_3g462850 | 33.577 | 137 | 79 | 5 | 200 | 324 | 9 | 145 | 1.35e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene42005.t1 | AT1G71695 | 45.289 | 329 | 175 | 3 | 23 | 348 | 31 | 357 | 4.93e-100 | 300 |
| MS.gene42005.t1 | AT4G33420 | 40.256 | 313 | 183 | 2 | 16 | 328 | 17 | 325 | 6.86e-74 | 232 |
| MS.gene42005.t1 | AT4G33420 | 40.256 | 313 | 183 | 2 | 16 | 328 | 64 | 372 | 3.32e-73 | 231 |
| MS.gene42005.t1 | AT5G14130 | 38.462 | 325 | 183 | 4 | 11 | 328 | 16 | 330 | 6.75e-73 | 229 |
| MS.gene42005.t1 | AT5G14130 | 38.462 | 325 | 183 | 4 | 11 | 328 | 57 | 371 | 1.66e-72 | 229 |
| MS.gene42005.t1 | AT4G08770 | 40.184 | 326 | 181 | 7 | 35 | 348 | 23 | 346 | 1.74e-71 | 226 |
| MS.gene42005.t1 | AT4G37520 | 39.542 | 306 | 171 | 5 | 35 | 328 | 26 | 329 | 1.76e-71 | 226 |
| MS.gene42005.t1 | AT5G64120 | 39.210 | 329 | 187 | 6 | 7 | 328 | 6 | 328 | 1.52e-69 | 221 |
| MS.gene42005.t1 | AT4G37520 | 39.216 | 306 | 169 | 6 | 35 | 328 | 26 | 326 | 1.95e-69 | 220 |
| MS.gene42005.t1 | AT4G08780 | 39.877 | 326 | 182 | 7 | 35 | 348 | 23 | 346 | 2.55e-69 | 221 |
| MS.gene42005.t1 | AT4G37530 | 38.158 | 304 | 178 | 4 | 35 | 328 | 26 | 329 | 1.06e-68 | 218 |
| MS.gene42005.t1 | AT5G06730 | 35.465 | 344 | 208 | 6 | 1 | 334 | 1 | 340 | 1.36e-68 | 219 |
| MS.gene42005.t1 | AT2G18980 | 41.333 | 300 | 162 | 6 | 35 | 324 | 24 | 319 | 1.98e-68 | 218 |
| MS.gene42005.t1 | AT5G19880 | 40.196 | 306 | 163 | 6 | 35 | 324 | 24 | 325 | 7.54e-68 | 216 |
| MS.gene42005.t1 | AT3G32980 | 39.009 | 323 | 179 | 7 | 35 | 345 | 30 | 346 | 5.34e-67 | 215 |
| MS.gene42005.t1 | AT3G28200 | 37.874 | 301 | 182 | 3 | 32 | 328 | 17 | 316 | 8.68e-66 | 211 |
| MS.gene42005.t1 | AT2G38390 | 41.368 | 307 | 168 | 7 | 35 | 330 | 30 | 335 | 8.92e-66 | 211 |
| MS.gene42005.t1 | AT5G15180 | 36.145 | 332 | 197 | 7 | 1 | 324 | 1 | 325 | 9.97e-66 | 211 |
| MS.gene42005.t1 | AT2G24800 | 38.312 | 308 | 172 | 6 | 33 | 328 | 28 | 329 | 1.18e-65 | 211 |
| MS.gene42005.t1 | AT3G49120 | 38.390 | 323 | 181 | 7 | 35 | 345 | 31 | 347 | 2.09e-65 | 211 |
| MS.gene42005.t1 | AT5G58400 | 37.994 | 329 | 189 | 6 | 5 | 328 | 7 | 325 | 2.37e-65 | 210 |
| MS.gene42005.t1 | AT3G03670 | 37.134 | 307 | 183 | 4 | 30 | 328 | 17 | 321 | 3.81e-65 | 209 |
| MS.gene42005.t1 | AT3G49110 | 38.390 | 323 | 181 | 7 | 35 | 345 | 32 | 348 | 3.84e-65 | 210 |
| MS.gene42005.t1 | AT2G18140 | 37.377 | 305 | 181 | 5 | 34 | 329 | 33 | 336 | 5.17e-65 | 209 |
| MS.gene42005.t1 | AT5G40150 | 37.874 | 301 | 183 | 3 | 32 | 328 | 28 | 328 | 6.29e-65 | 209 |
| MS.gene42005.t1 | AT3G50990 | 37.171 | 304 | 177 | 7 | 32 | 324 | 37 | 337 | 7.98e-65 | 209 |
| MS.gene42005.t1 | AT2G18150 | 36.789 | 299 | 179 | 5 | 40 | 329 | 40 | 337 | 9.50e-65 | 209 |
| MS.gene42005.t1 | AT5G19890 | 39.414 | 307 | 167 | 7 | 35 | 329 | 29 | 328 | 1.80e-64 | 207 |
| MS.gene42005.t1 | AT2G22420 | 38.206 | 301 | 170 | 8 | 40 | 330 | 27 | 321 | 1.82e-64 | 207 |
| MS.gene42005.t1 | AT1G49570 | 40.264 | 303 | 169 | 5 | 36 | 327 | 48 | 349 | 2.02e-64 | 208 |
| MS.gene42005.t1 | AT4G30170 | 38.667 | 300 | 170 | 5 | 35 | 324 | 26 | 321 | 4.00e-64 | 206 |
| MS.gene42005.t1 | AT5G06720 | 35.202 | 321 | 194 | 6 | 14 | 324 | 13 | 329 | 5.14e-64 | 206 |
| MS.gene42005.t1 | AT1G24110 | 37.690 | 329 | 191 | 6 | 13 | 332 | 3 | 326 | 5.80e-64 | 206 |
| MS.gene42005.t1 | AT4G16270 | 40.468 | 299 | 164 | 8 | 36 | 324 | 50 | 344 | 6.09e-64 | 207 |
| MS.gene42005.t1 | AT4G36430 | 37.075 | 294 | 175 | 5 | 40 | 324 | 34 | 326 | 6.47e-64 | 206 |
| MS.gene42005.t1 | AT2G38380 | 40.717 | 307 | 170 | 7 | 35 | 330 | 30 | 335 | 7.93e-64 | 206 |
| MS.gene42005.t1 | AT5G05340 | 38.000 | 300 | 176 | 5 | 35 | 328 | 29 | 324 | 5.76e-63 | 203 |
| MS.gene42005.t1 | AT2G34060 | 35.673 | 342 | 202 | 8 | 1 | 324 | 1 | 342 | 6.30e-63 | 204 |
| MS.gene42005.t1 | AT3G01190 | 34.337 | 332 | 200 | 6 | 4 | 328 | 1 | 321 | 3.62e-62 | 201 |
| MS.gene42005.t1 | AT3G17070 | 37.000 | 300 | 176 | 5 | 36 | 324 | 38 | 335 | 3.70e-62 | 202 |
| MS.gene42005.t1 | AT5G67400 | 37.171 | 304 | 181 | 4 | 35 | 328 | 26 | 329 | 6.89e-62 | 201 |
| MS.gene42005.t1 | AT2G41480 | 38.870 | 301 | 167 | 5 | 40 | 328 | 33 | 328 | 9.15e-62 | 201 |
| MS.gene42005.t1 | AT3G49960 | 37.829 | 304 | 179 | 5 | 35 | 328 | 26 | 329 | 9.31e-62 | 201 |
| MS.gene42005.t1 | AT5G66390 | 37.838 | 296 | 170 | 6 | 40 | 324 | 37 | 329 | 1.19e-61 | 201 |
| MS.gene42005.t1 | AT4G17690 | 38.538 | 301 | 178 | 4 | 28 | 324 | 21 | 318 | 1.46e-61 | 200 |
| MS.gene42005.t1 | AT5G17820 | 37.874 | 301 | 172 | 5 | 30 | 324 | 18 | 309 | 2.37e-61 | 199 |
| MS.gene42005.t1 | AT5G47000 | 38.272 | 324 | 187 | 6 | 12 | 329 | 15 | 331 | 7.14e-61 | 198 |
| MS.gene42005.t1 | AT5G42180 | 36.333 | 300 | 177 | 5 | 33 | 324 | 20 | 313 | 9.31e-61 | 197 |
| MS.gene42005.t1 | AT5G51890 | 35.604 | 323 | 189 | 5 | 7 | 321 | 4 | 315 | 9.42e-61 | 197 |
| MS.gene42005.t1 | AT1G14540 | 36.986 | 292 | 180 | 4 | 40 | 328 | 25 | 315 | 1.44e-60 | 197 |
| MS.gene42005.t1 | AT1G14550 | 36.449 | 321 | 191 | 6 | 9 | 324 | 5 | 317 | 2.00e-60 | 197 |
| MS.gene42005.t1 | AT2G35380 | 39.604 | 303 | 160 | 8 | 40 | 324 | 34 | 331 | 2.16e-60 | 197 |
| MS.gene42005.t1 | AT1G44970 | 39.465 | 299 | 170 | 5 | 40 | 328 | 49 | 346 | 3.08e-60 | 197 |
| MS.gene42005.t1 | AT5G17820 | 37.874 | 301 | 172 | 5 | 30 | 324 | 71 | 362 | 4.07e-60 | 197 |
| MS.gene42005.t1 | AT5G39580 | 39.799 | 299 | 162 | 7 | 40 | 328 | 29 | 319 | 4.61e-60 | 196 |
| MS.gene42005.t1 | AT1G30870 | 39.216 | 306 | 166 | 8 | 36 | 330 | 51 | 347 | 1.01e-59 | 196 |
| MS.gene42005.t1 | AT2G39040 | 38.033 | 305 | 171 | 10 | 35 | 324 | 45 | 346 | 1.67e-59 | 195 |
| MS.gene42005.t1 | AT5G58390 | 36.250 | 320 | 189 | 6 | 15 | 328 | 6 | 316 | 1.92e-59 | 194 |
| MS.gene42005.t1 | AT4G11290 | 35.430 | 302 | 180 | 8 | 35 | 324 | 24 | 322 | 3.25e-59 | 194 |
| MS.gene42005.t1 | AT1G05240 | 36.304 | 303 | 180 | 5 | 36 | 328 | 26 | 325 | 3.84e-59 | 194 |
| MS.gene42005.t1 | AT1G05250 | 36.304 | 303 | 180 | 5 | 36 | 328 | 26 | 325 | 3.84e-59 | 194 |
| MS.gene42005.t1 | AT4G26010 | 37.294 | 303 | 179 | 6 | 30 | 329 | 16 | 310 | 7.78e-59 | 192 |
| MS.gene42005.t1 | AT1G05260 | 32.326 | 331 | 202 | 7 | 9 | 329 | 8 | 326 | 8.17e-59 | 193 |
| MS.gene42005.t1 | AT4G21960 | 34.462 | 325 | 203 | 5 | 10 | 328 | 7 | 327 | 8.73e-59 | 193 |
| MS.gene42005.t1 | AT4G26010 | 37.294 | 303 | 179 | 6 | 30 | 329 | 44 | 338 | 9.25e-59 | 193 |
| MS.gene42005.t1 | AT3G21770 | 34.323 | 303 | 180 | 8 | 35 | 324 | 28 | 324 | 2.07e-58 | 192 |
| MS.gene42005.t1 | AT4G37530 | 39.286 | 252 | 143 | 4 | 35 | 276 | 26 | 277 | 3.73e-57 | 187 |
| MS.gene42005.t1 | AT1G68850 | 34.441 | 331 | 201 | 7 | 8 | 324 | 3 | 331 | 4.99e-57 | 189 |
| MS.gene42005.t1 | AT5G24070 | 34.557 | 327 | 192 | 6 | 16 | 328 | 17 | 335 | 5.61e-57 | 189 |
| MS.gene42005.t1 | AT4G31760 | 36.066 | 305 | 176 | 5 | 36 | 328 | 29 | 326 | 1.04e-55 | 185 |
| MS.gene42005.t1 | AT2G37130 | 33.446 | 296 | 188 | 6 | 36 | 324 | 30 | 323 | 3.68e-55 | 183 |
| MS.gene42005.t1 | AT2G37130 | 33.447 | 293 | 186 | 6 | 39 | 324 | 2 | 292 | 8.45e-55 | 181 |
| MS.gene42005.t1 | AT1G77100 | 34.877 | 324 | 200 | 6 | 11 | 328 | 1 | 319 | 6.49e-54 | 180 |
| MS.gene42005.t1 | AT5G64110 | 37.793 | 299 | 170 | 6 | 40 | 328 | 38 | 330 | 8.42e-54 | 180 |
| MS.gene42005.t1 | AT4G33870 | 33.434 | 332 | 176 | 6 | 36 | 324 | 68 | 397 | 2.21e-53 | 181 |
| MS.gene42005.t1 | AT5G22410 | 34.853 | 307 | 181 | 9 | 35 | 329 | 27 | 326 | 3.17e-52 | 176 |
| MS.gene42005.t1 | AT5G64100 | 36.577 | 298 | 173 | 6 | 40 | 328 | 41 | 331 | 6.67e-52 | 175 |
| MS.gene42005.t1 | AT2G43480 | 31.132 | 318 | 195 | 6 | 23 | 324 | 22 | 331 | 3.61e-51 | 173 |
| MS.gene42005.t1 | AT1G34510 | 34.539 | 304 | 186 | 7 | 30 | 329 | 16 | 310 | 2.44e-49 | 168 |
| MS.gene42005.t1 | AT4G25980 | 32.787 | 305 | 189 | 5 | 36 | 328 | 26 | 326 | 1.40e-46 | 161 |
| MS.gene42005.t1 | AT3G17070 | 35.827 | 254 | 150 | 5 | 82 | 324 | 21 | 272 | 9.51e-46 | 157 |
| MS.gene42005.t1 | AT2G35380 | 37.959 | 245 | 129 | 8 | 98 | 324 | 4 | 243 | 3.42e-43 | 150 |
| MS.gene42005.t1 | AT2G24800 | 39.080 | 174 | 100 | 3 | 33 | 205 | 28 | 196 | 7.23e-33 | 122 |
| MS.gene42005.t1 | AT5G39580 | 37.989 | 179 | 100 | 4 | 40 | 215 | 29 | 199 | 6.63e-29 | 112 |
| MS.gene42005.t1 | AT4G25980 | 35.882 | 170 | 105 | 2 | 36 | 205 | 71 | 236 | 1.81e-27 | 109 |
| MS.gene42005.t1 | AT4G32320 | 27.953 | 254 | 126 | 7 | 65 | 307 | 112 | 319 | 1.84e-14 | 73.9 |
| MS.gene42005.t1 | AT3G42570 | 34.314 | 102 | 63 | 3 | 104 | 203 | 50 | 149 | 2.10e-11 | 62.0 |
Find 66 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTAGATTTCCTATTATT+TGG | 0.128939 | 6.4:+17372121 | None:intergenic |
| ATGATGCCAACTTCGCTTTA+AGG | 0.164350 | 6.4:-17374893 | MS.gene42005:CDS |
| TCGAGTTGTTTCTTGAAATT+TGG | 0.165142 | 6.4:+17372424 | None:intergenic |
| CTATCTGGTGCCCACACTTT+TGG | 0.251851 | 6.4:-17372505 | MS.gene42005:CDS |
| CCCAATGGCACGTCAAAATC+TGG | 0.255614 | 6.4:+17372652 | None:intergenic |
| CTGCATTTACACTGAAGTTT+AGG | 0.301903 | 6.4:+17372617 | None:intergenic |
| GAAATCTAAGGTGGCATCTA+TGG | 0.324726 | 6.4:-17372110 | MS.gene42005:CDS |
| TTCACAATCTCCTTAGTCTT+AGG | 0.327909 | 6.4:+17372262 | None:intergenic |
| CTTACAATCCTTTCAATCCT+AGG | 0.351971 | 6.4:+17375425 | None:intergenic |
| TCCAAATAATAGGAAATCTA+AGG | 0.367020 | 6.4:-17372122 | MS.gene42005:CDS |
| ATGATTCGGTTGAACATTGT+TGG | 0.380602 | 6.4:+17372469 | None:intergenic |
| TGATGCCAACTTCGCTTTAA+GGG | 0.384442 | 6.4:-17374892 | MS.gene42005:CDS |
| ACCGATGTAGTTGCTCTATC+TGG | 0.387253 | 6.4:-17372520 | MS.gene42005:CDS |
| CTTGAATTTGTACAGTTTGG+AGG | 0.394165 | 6.4:-17372676 | MS.gene42005:intron |
| TCTGTTCGTGCAAATGGTAC+TGG | 0.412087 | 6.4:+17372583 | None:intergenic |
| AGTTCATCTGTTCGTGCAAA+TGG | 0.412175 | 6.4:+17372577 | None:intergenic |
| TTGAAATTTGGTTCGATTGG+TGG | 0.414542 | 6.4:+17372436 | None:intergenic |
| TTTATTGGTTGTCATGTCCT+AGG | 0.416911 | 6.4:-17375442 | MS.gene42005:CDS |
| TACATATTATCGAATGTGTT+TGG | 0.420413 | 6.4:+17372346 | None:intergenic |
| GTGGGTCGGATTCAATGATT+CGG | 0.450356 | 6.4:+17372455 | None:intergenic |
| TTCTTGAAATTTGGTTCGAT+TGG | 0.452274 | 6.4:+17372433 | None:intergenic |
| TGAAATTTGGTTCGATTGGT+GGG | 0.456433 | 6.4:+17372437 | None:intergenic |
| GGCAAGTCATCCTAAGACTA+AGG | 0.457751 | 6.4:-17372272 | MS.gene42005:CDS |
| CTCCTCCCTTAAAGCGAAGT+TGG | 0.465950 | 6.4:+17374887 | None:intergenic |
| ATCTAAATTAACAGCGTTGA+GGG | 0.471387 | 6.4:+17372378 | None:intergenic |
| CTAGGATTGAAAGGATTGTA+AGG | 0.474721 | 6.4:-17375424 | MS.gene42005:CDS |
| ATTTGGTTCGATTGGTGGGT+CGG | 0.494826 | 6.4:+17372441 | None:intergenic |
| ATACCTGGGAAAAGCAATCA+TGG | 0.501223 | 6.4:+17375336 | None:intergenic |
| CAACCCGTGGACACTGCTTA+CGG | 0.504325 | 6.4:+17374829 | None:intergenic |
| CCAATGGCACGTCAAAATCT+GGG | 0.508698 | 6.4:+17372653 | None:intergenic |
| CTGTTCGTGCAAATGGTACT+GGG | 0.511334 | 6.4:+17372584 | None:intergenic |
| AAGGATAGTGGTCAAGCTCC+TGG | 0.512801 | 6.4:-17375377 | MS.gene42005:CDS |
| GCGTTGAGGGACTCCTCATT+CGG | 0.516346 | 6.4:+17372391 | None:intergenic |
| CATTAACCTCTTGAATCACC+AGG | 0.518011 | 6.4:-17372320 | MS.gene42005:CDS |
| GGTGGCATCTATGGTGGAAG+AGG | 0.527491 | 6.4:-17372101 | MS.gene42005:CDS |
| CTAAACTTCAGTGTAAATGC+AGG | 0.534350 | 6.4:-17372616 | MS.gene42005:CDS |
| CAACTTCGCTTTAAGGGAGG+AGG | 0.538343 | 6.4:-17374886 | MS.gene42005:CDS |
| CTTTCTGGTTAGAAGCAAAG+AGG | 0.545522 | 6.4:+17372239 | None:intergenic |
| GTTTACATCGGATCAAGACT+TGG | 0.546163 | 6.4:-17372293 | MS.gene42005:CDS |
| TGTCATGTCCTAGGATTGAA+AGG | 0.547029 | 6.4:-17375433 | MS.gene42005:CDS |
| CTACTCTCTCAGAGGAAACA+AGG | 0.549748 | 6.4:+17375501 | None:intergenic |
| TAGTCTAGTCTCCTCACAGC+AGG | 0.555352 | 6.4:+17375470 | None:intergenic |
| CGAAGCAACATGTCCGAATG+AGG | 0.556767 | 6.4:-17372404 | MS.gene42005:CDS |
| CTTCGCGTGCGGCGATGACG+AGG | 0.563945 | 6.4:+17374790 | None:intergenic |
| TAATCCGTAAGCAGTGTCCA+CGG | 0.582650 | 6.4:-17374833 | MS.gene42005:CDS |
| ATCTAAGGTGGCATCTATGG+TGG | 0.582875 | 6.4:-17372107 | MS.gene42005:CDS |
| ATCTATGGTGGAAGAGGTGA+TGG | 0.583574 | 6.4:-17372095 | MS.gene42005:CDS |
| TTGGCGAACAGCTTCGCGTG+CGG | 0.588097 | 6.4:+17374779 | None:intergenic |
| AATCCGTAAGCAGTGTCCAC+GGG | 0.592933 | 6.4:-17374832 | MS.gene42005:CDS |
| TATAGCACGAAGGTTCTCAA+TGG | 0.596636 | 6.4:+17374854 | None:intergenic |
| AATGAGCTTGACCAAAAGTG+TGG | 0.611586 | 6.4:+17372494 | None:intergenic |
| CATCTAAATTAACAGCGTTG+AGG | 0.613761 | 6.4:+17372377 | None:intergenic |
| TCTGCGCACGAGACAACCCG+TGG | 0.623291 | 6.4:+17374816 | None:intergenic |
| TCTAGTCTCCTCACAGCAGG+AGG | 0.636097 | 6.4:+17375473 | None:intergenic |
| TGCCAACTTCGCTTTAAGGG+AGG | 0.642027 | 6.4:-17374889 | MS.gene42005:CDS |
| AAATAATAGGAAATCTAAGG+TGG | 0.648910 | 6.4:-17372119 | MS.gene42005:CDS |
| ATGAGCTTGACCAAAAGTGT+GGG | 0.655019 | 6.4:+17372495 | None:intergenic |
| ACACACCCTGGTGATTCAAG+AGG | 0.659078 | 6.4:+17372314 | None:intergenic |
| TAGCAAGGCCTCCTGCTGTG+AGG | 0.664189 | 6.4:-17375481 | MS.gene42005:CDS |
| TCACCAGGGTGTGTTTACAT+CGG | 0.667869 | 6.4:-17372305 | MS.gene42005:CDS |
| GATCCGATGTAAACACACCC+TGG | 0.671264 | 6.4:+17372302 | None:intergenic |
| ACCAGATAGAGCAACTACAT+CGG | 0.673269 | 6.4:+17372519 | None:intergenic |
| TTTCCTCTGAGAGAGTAGCA+AGG | 0.674398 | 6.4:-17375496 | MS.gene42005:CDS |
| AGGCCTTGCTACTCTCTCAG+AGG | 0.695047 | 6.4:+17375493 | None:intergenic |
| ATTAACCTCTTGAATCACCA+GGG | 0.706268 | 6.4:-17372319 | MS.gene42005:CDS |
| GCTTACGGATTATAGCACGA+AGG | 0.761809 | 6.4:+17374844 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATAAATAATATTTTATA+GGG | + | chr6.4:17374382-17374401 | None:intergenic | 0.0% |
| !!! | TAAAATAAATAATATTTTAT+AGG | + | chr6.4:17374383-17374402 | None:intergenic | 0.0% |
| !!! | TTATTTATTTTATTAATTTA+AGG | - | chr6.4:17374391-17374410 | MS.gene42005:intron | 0.0% |
| !! | ATATATATGACAATTATAAT+TGG | - | chr6.4:17372964-17372983 | MS.gene42005:intron | 10.0% |
| !! | TAAAAATAAGAAATAAAAAG+TGG | + | chr6.4:17373660-17373679 | None:intergenic | 10.0% |
| !!! | ATTAAATATTTTCAATTACA+TGG | + | chr6.4:17372613-17372632 | None:intergenic | 10.0% |
| !!! | CTATAAAAACTTTTTTTTTT+TGG | - | chr6.4:17372993-17373012 | MS.gene42005:intron | 10.0% |
| !! | AAGAAATAATTTCTACATTT+GGG | - | chr6.4:17374318-17374337 | MS.gene42005:intron | 15.0% |
| !! | AATGTTGAATTGATTATTAT+TGG | - | chr6.4:17373787-17373806 | MS.gene42005:intron | 15.0% |
| !! | ATACTGTAAATTTATTTCAA+GGG | + | chr6.4:17373366-17373385 | None:intergenic | 15.0% |
| !! | ATGTTGAATTGATTATTATT+GGG | - | chr6.4:17373788-17373807 | MS.gene42005:intron | 15.0% |
| !! | ATTTACAGTATCAAAATATT+TGG | - | chr6.4:17373375-17373394 | MS.gene42005:intron | 15.0% |
| !! | GTAAAATTATTTACATGATA+GGG | - | chr6.4:17374605-17374624 | MS.gene42005:intron | 15.0% |
| !! | TAAGAAATAATTTCTACATT+TGG | - | chr6.4:17374317-17374336 | MS.gene42005:intron | 15.0% |
| !! | TGTAAAATTATTTACATGAT+AGG | - | chr6.4:17374604-17374623 | MS.gene42005:intron | 15.0% |
| !!! | AAAGATTAAATGTTGATTTT+TGG | - | chr6.4:17372651-17372670 | MS.gene42005:CDS | 15.0% |
| !!! | TAAAAACTTTTTTTTTTTGG+TGG | - | chr6.4:17372996-17373015 | MS.gene42005:intron | 15.0% |
| !!! | TGATATGATAATATTGATTT+GGG | - | chr6.4:17372519-17372538 | MS.gene42005:CDS | 15.0% |
| !!! | TTGATATGATAATATTGATT+TGG | - | chr6.4:17372518-17372537 | MS.gene42005:CDS | 15.0% |
| !!! | TTTCATTTTCTTAATGTTTT+GGG | + | chr6.4:17374005-17374024 | None:intergenic | 15.0% |
| !!! | TTTTCATTTTCTTAATGTTT+TGG | + | chr6.4:17374006-17374025 | None:intergenic | 15.0% |
| !! | AAAAATCAACTTAAAATGGT+TGG | + | chr6.4:17374427-17374446 | None:intergenic | 20.0% |
| !! | AAATAAGAAATAAAAAGTGG+TGG | + | chr6.4:17373657-17373676 | None:intergenic | 20.0% |
| !! | AATAAGAAATAAAAAGTGGT+GGG | + | chr6.4:17373656-17373675 | None:intergenic | 20.0% |
| !! | ACACATAAATAGAAATTACT+TGG | + | chr6.4:17372878-17372897 | None:intergenic | 20.0% |
| !! | GACTAAAAATCAACTTAAAA+TGG | + | chr6.4:17374431-17374450 | None:intergenic | 20.0% |
| !! | GATAATGCATAATATATGTA+AGG | - | chr6.4:17374532-17374551 | MS.gene42005:intron | 20.0% |
| !! | GATACTGTAAATTTATTTCA+AGG | + | chr6.4:17373367-17373386 | None:intergenic | 20.0% |
| !! | TACTGTAAATTTATTTCAAG+GGG | + | chr6.4:17373365-17373384 | None:intergenic | 20.0% |
| !! | TAGTCTTTCCATTTATAATT+CGG | - | chr6.4:17374446-17374465 | MS.gene42005:intron | 20.0% |
| !! | TGAAGGAAAAAATAAGTTAA+AGG | + | chr6.4:17372565-17372584 | None:intergenic | 20.0% |
| !!! | AATTAAGAGAGTGAAAATTT+TGG | - | chr6.4:17373862-17373881 | MS.gene42005:intron | 20.0% |
| !!! | ATCAAATACTTGATTCTTTT+TGG | - | chr6.4:17374574-17374593 | MS.gene42005:intron | 20.0% |
| !!! | ATTAATGTTTTTAATTTGCG+TGG | - | chr6.4:17374752-17374771 | MS.gene42005:intron | 20.0% |
| !!! | ATTTGTTAAAAAACTCTTTC+TGG | + | chr6.4:17375414-17375433 | None:intergenic | 20.0% |
| ! | AAATAATAGGAAATCTAAGG+TGG | - | chr6.4:17375516-17375535 | MS.gene42005:CDS | 25.0% |
| ! | ACCAATATCCGAATTATAAA+TGG | + | chr6.4:17374457-17374476 | None:intergenic | 25.0% |
| ! | ACCTTAGATTTCCTATTATT+TGG | + | chr6.4:17375517-17375536 | None:intergenic | 25.0% |
| ! | ACTGTAAATTTATTTCAAGG+GGG | + | chr6.4:17373364-17373383 | None:intergenic | 25.0% |
| ! | AGTTAAAGATCTGAGTTTAA+TGG | + | chr6.4:17374838-17374857 | None:intergenic | 25.0% |
| ! | ATAAGAAATAAAAAGTGGTG+GGG | + | chr6.4:17373655-17373674 | None:intergenic | 25.0% |
| ! | ATATTATGTCACAAGTAGAT+AGG | - | chr6.4:17373269-17373288 | MS.gene42005:intron | 25.0% |
| ! | ATCTTAATTCAATTCATACC+TGG | + | chr6.4:17372317-17372336 | None:intergenic | 25.0% |
| ! | ATTTCGATCAAATCATTGAA+CGG | + | chr6.4:17373421-17373440 | None:intergenic | 25.0% |
| ! | CGTCTATAAAAAAGAAAGTA+CGG | + | chr6.4:17372351-17372370 | None:intergenic | 25.0% |
| ! | CTTTGCGATTAAAATAATTG+AGG | + | chr6.4:17373190-17373209 | None:intergenic | 25.0% |
| ! | TACATATTATCGAATGTGTT+TGG | + | chr6.4:17375292-17375311 | None:intergenic | 25.0% |
| ! | TCCAAATAATAGGAAATCTA+AGG | - | chr6.4:17375513-17375532 | MS.gene42005:CDS | 25.0% |
| ! | TCCATTTATAATTCGGATAT+TGG | - | chr6.4:17374453-17374472 | MS.gene42005:intron | 25.0% |
| ! | TCTTAATTCAATTCATACCT+GGG | + | chr6.4:17372316-17372335 | None:intergenic | 25.0% |
| ! | TGCATAAAATATGTAAGATC+CGG | + | chr6.4:17373036-17373055 | None:intergenic | 25.0% |
| ! | TGGAAATAAAAAGATTGTGT+AGG | + | chr6.4:17372593-17372612 | None:intergenic | 25.0% |
| ! | TTGTGTATGTAAAGTTGTTT+AGG | + | chr6.4:17374702-17374721 | None:intergenic | 25.0% |
| !! | GACTAGACTATGATTTTTAT+TGG | - | chr6.4:17372178-17372197 | MS.gene42005:CDS | 25.0% |
| !! | GATGAACTATTAACCATTTT+CGG | - | chr6.4:17375073-17375092 | MS.gene42005:intron | 25.0% |
| !! | GGAAAAAAAATCACGAATTT+TGG | - | chr6.4:17373932-17373951 | MS.gene42005:intron | 25.0% |
| !! | TTAGTCTTTACTTAGTGAAA+TGG | + | chr6.4:17373816-17373835 | None:intergenic | 25.0% |
| !!! | AACTTTTTTTTTTTGGTGGT+CGG | - | chr6.4:17373000-17373019 | MS.gene42005:intron | 25.0% |
| !!! | ATTTGCTAATGCTTTTGTTA+AGG | - | chr6.4:17375432-17375451 | MS.gene42005:CDS | 25.0% |
| !!! | ATTTTGTTGAATGGTGTTAA+TGG | - | chr6.4:17372699-17372718 | MS.gene42005:intron | 25.0% |
| !!! | CTCTCTTTTATTTCTTCTTT+TGG | - | chr6.4:17372901-17372920 | MS.gene42005:intron | 25.0% |
| !!! | GAATTTTTTTGATCCGAAAA+TGG | + | chr6.4:17375089-17375108 | None:intergenic | 25.0% |
| !!! | GATAGATCTTTAGAGTTTAA+TGG | - | chr6.4:17374661-17374680 | MS.gene42005:intron | 25.0% |
| !!! | GTGAGAGTACAAAATTATTT+TGG | - | chr6.4:17374797-17374816 | MS.gene42005:CDS | 25.0% |
| !!! | TATAATTCGGATATTGGTTT+TGG | - | chr6.4:17374459-17374478 | MS.gene42005:intron | 25.0% |
| !!! | TCTTGAAGATGTTTTTGAAA+AGG | - | chr6.4:17372239-17372258 | MS.gene42005:CDS | 25.0% |
| !!! | TTGATTTTTGGATTGAAACA+GGG | - | chr6.4:17372663-17372682 | MS.gene42005:CDS | 25.0% |
| !!! | TTTTGTTAAGGTTAGTCAAT+TGG | - | chr6.4:17375444-17375463 | MS.gene42005:CDS | 25.0% |
| AATTGAGGCATGTAATATCA+AGG | + | chr6.4:17373175-17373194 | None:intergenic | 30.0% | |
| AGTCTCAATATGCTTTCAAT+AGG | - | chr6.4:17374148-17374167 | MS.gene42005:intron | 30.0% | |
| CATAAAATATGTAAGATCCG+GGG | + | chr6.4:17373034-17373053 | None:intergenic | 30.0% | |
| CTGTAAATTTATTTCAAGGG+GGG | + | chr6.4:17373363-17373382 | None:intergenic | 30.0% | |
| GCATAAAATATGTAAGATCC+GGG | + | chr6.4:17373035-17373054 | None:intergenic | 30.0% | |
| GTCTCAATATGCTTTCAATA+GGG | - | chr6.4:17374149-17374168 | MS.gene42005:intron | 30.0% | |
| TAAAGATCTGAGTTTAATGG+TGG | + | chr6.4:17374835-17374854 | None:intergenic | 30.0% | |
| TAACAAACCAGGTGATAAAT+AGG | + | chr6.4:17373301-17373320 | None:intergenic | 30.0% | |
| TAACTGAAGTAAATCCACTT+GGG | - | chr6.4:17372495-17372514 | MS.gene42005:CDS | 30.0% | |
| TATTATCATATCAACCCAAG+TGG | + | chr6.4:17372512-17372531 | None:intergenic | 30.0% | |
| TTAAGAGAGAGAAAATGATG+TGG | + | chr6.4:17373580-17373599 | None:intergenic | 30.0% | |
| TTCCTTGAATTTGTACAGTT+TGG | - | chr6.4:17374956-17374975 | MS.gene42005:intron | 30.0% | |
| TTTAATATGAACTGCAAGCT+TGG | + | chr6.4:17373453-17373472 | None:intergenic | 30.0% | |
| ! | ACATGCTTAGTTGCATTTTT+AGG | + | chr6.4:17374877-17374896 | None:intergenic | 30.0% |
| ! | ATCTAAATTAACAGCGTTGA+GGG | + | chr6.4:17375260-17375279 | None:intergenic | 30.0% |
| ! | CATGTTTTGCTCCAAATAAT+AGG | - | chr6.4:17375503-17375522 | MS.gene42005:CDS | 30.0% |
| ! | GATGCATCTATTTTGTTGAA+TGG | - | chr6.4:17372690-17372709 | MS.gene42005:intron | 30.0% |
| ! | TTCAATTTTTACCTCTCCAA+TGG | - | chr6.4:17373611-17373630 | MS.gene42005:intron | 30.0% |
| ! | TTCTTGAAATTTGGTTCGAT+TGG | + | chr6.4:17375205-17375224 | None:intergenic | 30.0% |
| ! | TTTTATAAGACCATCTCCAA+TGG | + | chr6.4:17374175-17374194 | None:intergenic | 30.0% |
| !! | AGATCTTTAGAGTTTAATGG+TGG | - | chr6.4:17374664-17374683 | MS.gene42005:intron | 30.0% |
| !! | CGTGGCAGTTTAAAATATTT+TGG | - | chr6.4:17374770-17374789 | MS.gene42005:intron | 30.0% |
| !! | GATGTTTTTGAAAAGGATAG+TGG | - | chr6.4:17372246-17372265 | MS.gene42005:CDS | 30.0% |
| !! | GTTGATTTTTGGATTGAAAC+AGG | - | chr6.4:17372662-17372681 | MS.gene42005:CDS | 30.0% |
| !! | TCGAGTTGTTTCTTGAAATT+TGG | + | chr6.4:17375214-17375233 | None:intergenic | 30.0% |
| !! | TGGAGATGGTCTTATAAAAT+AGG | - | chr6.4:17374176-17374195 | MS.gene42005:intron | 30.0% |
| !!! | ACTTTTTTTTTTTGGTGGTC+GGG | - | chr6.4:17373001-17373020 | MS.gene42005:intron | 30.0% |
| AGATTGTGTAGGATACTTGA+AGG | + | chr6.4:17372582-17372601 | None:intergenic | 35.0% | |
| ATCCAAGTCTCTATTTGTAG+AGG | - | chr6.4:17373911-17373930 | MS.gene42005:intron | 35.0% | |
| ATTAACCTCTTGAATCACCA+GGG | - | chr6.4:17375316-17375335 | MS.gene42005:intron | 35.0% | |
| CAAGCCTATTGAAAATGACA+TGG | + | chr6.4:17374111-17374130 | None:intergenic | 35.0% | |
| CATCTAAATTAACAGCGTTG+AGG | + | chr6.4:17375261-17375280 | None:intergenic | 35.0% | |
| CTAAACTTCAGTGTAAATGC+AGG | - | chr6.4:17375019-17375038 | MS.gene42005:intron | 35.0% | |
| CTAGGATTGAAAGGATTGTA+AGG | - | chr6.4:17372211-17372230 | MS.gene42005:CDS | 35.0% | |
| CTCCAAACTGTACAAATTCA+AGG | + | chr6.4:17374961-17374980 | None:intergenic | 35.0% | |
| CTGCATTTACACTGAAGTTT+AGG | + | chr6.4:17375021-17375040 | None:intergenic | 35.0% | |
| CTTACAATCCTTTCAATCCT+AGG | + | chr6.4:17372213-17372232 | None:intergenic | 35.0% | |
| CTTGAATTTGTACAGTTTGG+AGG | - | chr6.4:17374959-17374978 | MS.gene42005:intron | 35.0% | |
| GAGACTTGGATCATTTCATT+TGG | + | chr6.4:17373902-17373921 | None:intergenic | 35.0% | |
| GTAACTGAAGTAAATCCACT+TGG | - | chr6.4:17372494-17372513 | MS.gene42005:CDS | 35.0% | |
| GTGTTGGGAATTGAAAAAGT+GGG | + | chr6.4:17373556-17373575 | None:intergenic | 35.0% | |
| TTCCTCTACAAATAGAGACT+TGG | + | chr6.4:17373916-17373935 | None:intergenic | 35.0% | |
| TTGAATGAAAACCATTGGAG+AGG | + | chr6.4:17373625-17373644 | None:intergenic | 35.0% | |
| ! | AAATAAAAAGTGGTGGGGTA+GGG | + | chr6.4:17373650-17373669 | None:intergenic | 35.0% |
| ! | AAGGGTTTTACCATTGTACA+TGG | + | chr6.4:17373517-17373536 | None:intergenic | 35.0% |
| ! | AGAAAATGATGTGGAGTGTT+GGG | + | chr6.4:17373571-17373590 | None:intergenic | 35.0% |
| ! | AGTGTTGGGAATTGAAAAAG+TGG | + | chr6.4:17373557-17373576 | None:intergenic | 35.0% |
| ! | GGTGTTGAAAGTTGTTGAAA+GGG | + | chr6.4:17373535-17373554 | None:intergenic | 35.0% |
| ! | TGAAATTTGGTTCGATTGGT+GGG | + | chr6.4:17375201-17375220 | None:intergenic | 35.0% |
| ! | TTCACAATCTCCTTAGTCTT+AGG | + | chr6.4:17375376-17375395 | None:intergenic | 35.0% |
| ! | TTGAAATTTGGTTCGATTGG+TGG | + | chr6.4:17375202-17375221 | None:intergenic | 35.0% |
| ! | TTTATTGGTTGTCATGTCCT+AGG | - | chr6.4:17372193-17372212 | MS.gene42005:CDS | 35.0% |
| !! | ACTTCTTAACTTGTGTCTTG+AGG | + | chr6.4:17374219-17374238 | None:intergenic | 35.0% |
| !! | ATGATTCGGTTGAACATTGT+TGG | + | chr6.4:17375169-17375188 | None:intergenic | 35.0% |
| !! | ATTGAGACTTGTTGAACCAT+TGG | + | chr6.4:17374137-17374156 | None:intergenic | 35.0% |
| !! | CTTCTTAACTTGTGTCTTGA+GGG | + | chr6.4:17374218-17374237 | None:intergenic | 35.0% |
| !!! | AATGGTTTTGTCCTAGACAA+GGG | + | chr6.4:17373334-17373353 | None:intergenic | 35.0% |
| !!! | AGTCAATTGGATGTTTTGAC+TGG | - | chr6.4:17375457-17375476 | MS.gene42005:CDS | 35.0% |
| !!! | ATTCGGATATTGGTTTTGGT+TGG | - | chr6.4:17374463-17374482 | MS.gene42005:intron | 35.0% |
| !!! | CTTTTTTTTTTTGGTGGTCG+GGG | - | chr6.4:17373002-17373021 | MS.gene42005:intron | 35.0% |
| !!! | GATGTTTTGACTGGAAATCA+AGG | - | chr6.4:17375466-17375485 | MS.gene42005:CDS | 35.0% |
| !!! | TCCTCCATGTCATTTTCAAT+AGG | - | chr6.4:17374104-17374123 | MS.gene42005:intron | 35.0% |
| AAAAAGAGTCTGAGTATGCC+AGG | + | chr6.4:17372279-17372298 | None:intergenic | 40.0% | |
| AAGAAATGAACCAGCTGTGA+GGG | - | chr6.4:17372409-17372428 | MS.gene42005:CDS | 40.0% | |
| AATGAGCTTGACCAAAAGTG+TGG | + | chr6.4:17375144-17375163 | None:intergenic | 40.0% | |
| ACCAGATAGAGCAACTACAT+CGG | + | chr6.4:17375119-17375138 | None:intergenic | 40.0% | |
| AGATCTGAGTTTAATGGTGG+TGG | + | chr6.4:17374832-17374851 | None:intergenic | 40.0% | |
| AGTTCATCTGTTCGTGCAAA+TGG | + | chr6.4:17375061-17375080 | None:intergenic | 40.0% | |
| ATACCTGGGAAAAGCAATCA+TGG | + | chr6.4:17372302-17372321 | None:intergenic | 40.0% | |
| ATGATGCCAACTTCGCTTTA+AGG | - | chr6.4:17372742-17372761 | MS.gene42005:intron | 40.0% | |
| CATTAACCTCTTGAATCACC+AGG | - | chr6.4:17375315-17375334 | MS.gene42005:intron | 40.0% | |
| CGTCTTTAGACCATGTACAA+TGG | - | chr6.4:17373504-17373523 | MS.gene42005:intron | 40.0% | |
| GAGAAAATGATGTGGAGTGT+TGG | + | chr6.4:17373572-17373591 | None:intergenic | 40.0% | |
| GATCTGAGTTTAATGGTGGT+GGG | + | chr6.4:17374831-17374850 | None:intergenic | 40.0% | |
| GCCTATTGAAAATGACATGG+AGG | + | chr6.4:17374108-17374127 | None:intergenic | 40.0% | |
| GTCTCAACCTATTTATCACC+TGG | - | chr6.4:17373291-17373310 | MS.gene42005:intron | 40.0% | |
| GTTTACATCGGATCAAGACT+TGG | - | chr6.4:17375342-17375361 | MS.gene42005:CDS | 40.0% | |
| TAAGAAATGAACCAGCTGTG+AGG | - | chr6.4:17372408-17372427 | MS.gene42005:CDS | 40.0% | |
| TACCAACTGAACTAAGCTCA+CGG | + | chr6.4:17374510-17374529 | None:intergenic | 40.0% | |
| TATAGCACGAAGGTTCTCAA+TGG | + | chr6.4:17372784-17372803 | None:intergenic | 40.0% | |
| TATGCTTTCAATAGGGCCAT+TGG | - | chr6.4:17374156-17374175 | MS.gene42005:intron | 40.0% | |
| TGATGCCAACTTCGCTTTAA+GGG | - | chr6.4:17372743-17372762 | MS.gene42005:intron | 40.0% | |
| TGTCATGTCCTAGGATTGAA+AGG | - | chr6.4:17372202-17372221 | MS.gene42005:CDS | 40.0% | |
| ! | ATGAGCTTGACCAAAAGTGT+GGG | + | chr6.4:17375143-17375162 | None:intergenic | 40.0% |
| ! | GAAATAAAAAGTGGTGGGGT+AGG | + | chr6.4:17373651-17373670 | None:intergenic | 40.0% |
| ! | GAAATCTAAGGTGGCATCTA+TGG | - | chr6.4:17375525-17375544 | MS.gene42005:CDS | 40.0% |
| ! | TGAGCTTAACTCAGTTGGTA+TGG | + | chr6.4:17373063-17373082 | None:intergenic | 40.0% |
| ! | TGAGCTTAGTTCAGTTGGTA+AGG | - | chr6.4:17374510-17374529 | MS.gene42005:intron | 40.0% |
| ! | TTCAATAGGCTTGCTTCCAA+TGG | - | chr6.4:17374118-17374137 | MS.gene42005:intron | 40.0% |
| ! | TTTCAAGGGGGGTATAAGAA+TGG | + | chr6.4:17373352-17373371 | None:intergenic | 40.0% |
| !! | CTTTCTGGTTAGAAGCAAAG+AGG | + | chr6.4:17375399-17375418 | None:intergenic | 40.0% |
| !! | GGGTGTTGAAAGTTGTTGAA+AGG | + | chr6.4:17373536-17373555 | None:intergenic | 40.0% |
| !! | GGGTGTTGAATGAAAACCAT+TGG | + | chr6.4:17373630-17373649 | None:intergenic | 40.0% |
| !! | TCATGTTAACTTGTGCCCTT+GGG | + | chr6.4:17374359-17374378 | None:intergenic | 40.0% |
| !! | TTTCCATGATTGCTTTTCCC+AGG | - | chr6.4:17372296-17372315 | MS.gene42005:CDS | 40.0% |
| !!! | GAATGGTTTTGTCCTAGACA+AGG | + | chr6.4:17373335-17373354 | None:intergenic | 40.0% |
| ACCAACTGAACTAAGCTCAC+GGG | + | chr6.4:17374509-17374528 | None:intergenic | 45.0% | |
| ACCAATCATGTTGCAACACG+TGG | - | chr6.4:17374035-17374054 | MS.gene42005:intron | 45.0% | |
| ACCGATGTAGTTGCTCTATC+TGG | - | chr6.4:17375115-17375134 | MS.gene42005:intron | 45.0% | |
| ACTCGTGAGCTTAACTCAGT+TGG | + | chr6.4:17373068-17373087 | None:intergenic | 45.0% | |
| AGAAATGAACCAGCTGTGAG+GGG | - | chr6.4:17372410-17372429 | MS.gene42005:CDS | 45.0% | |
| CCAATGGCACGTCAAAATCT+GGG | + | chr6.4:17374985-17375004 | None:intergenic | 45.0% | |
| CTACTCTCTCAGAGGAAACA+AGG | + | chr6.4:17372137-17372156 | None:intergenic | 45.0% | |
| CTGTTCGTGCAAATGGTACT+GGG | + | chr6.4:17375054-17375073 | None:intergenic | 45.0% | |
| GCTCACGGGACAAACATAAA+TGG | + | chr6.4:17374495-17374514 | None:intergenic | 45.0% | |
| GGCAAGTCATCCTAAGACTA+AGG | - | chr6.4:17375363-17375382 | MS.gene42005:CDS | 45.0% | |
| GTCAAGGGAGTTAACAAACC+AGG | + | chr6.4:17373312-17373331 | None:intergenic | 45.0% | |
| GTGGGTCGGATTCAATGATT+CGG | + | chr6.4:17375183-17375202 | None:intergenic | 45.0% | |
| TAATCCGTAAGCAGTGTCCA+CGG | - | chr6.4:17372802-17372821 | MS.gene42005:intron | 45.0% | |
| TCACCAGGGTGTGTTTACAT+CGG | - | chr6.4:17375330-17375349 | MS.gene42005:intron | 45.0% | |
| TCTGTTCGTGCAAATGGTAC+TGG | + | chr6.4:17375055-17375074 | None:intergenic | 45.0% | |
| TTCAATAGGGCCATTGGAGA+TGG | - | chr6.4:17374162-17374181 | MS.gene42005:intron | 45.0% | |
| TTGCTTAACATGTGCCCCAA+GGG | - | chr6.4:17374341-17374360 | MS.gene42005:intron | 45.0% | |
| TTGTCCTAGACAAGGGTCAA+GGG | + | chr6.4:17373327-17373346 | None:intergenic | 45.0% | |
| TTTGTCCTAGACAAGGGTCA+AGG | + | chr6.4:17373328-17373347 | None:intergenic | 45.0% | |
| ! | AGGCTGTCTTTTCTTCCCAA+TGG | + | chr6.4:17375001-17375020 | None:intergenic | 45.0% |
| ! | ATCTAAGGTGGCATCTATGG+TGG | - | chr6.4:17375528-17375547 | MS.gene42005:CDS | 45.0% |
| ! | ATCTATGGTGGAAGAGGTGA+TGG | - | chr6.4:17375540-17375559 | MS.gene42005:CDS | 45.0% |
| ! | ATTTGGTTCGATTGGTGGGT+CGG | + | chr6.4:17375197-17375216 | None:intergenic | 45.0% |
| ! | GCTTACGGATTATAGCACGA+AGG | + | chr6.4:17372794-17372813 | None:intergenic | 45.0% |
| ! | TTTCCTCTGAGAGAGTAGCA+AGG | - | chr6.4:17372139-17372158 | MS.gene42005:CDS | 45.0% |
| !! | CATGTTAACTTGTGCCCTTG+GGG | + | chr6.4:17374358-17374377 | None:intergenic | 45.0% |
| !! | CCAGATTTTGACGTGCCATT+GGG | - | chr6.4:17374983-17375002 | MS.gene42005:intron | 45.0% |
| !! | GTCATGTTAACTTGTGCCCT+TGG | + | chr6.4:17374360-17374379 | None:intergenic | 45.0% |
| AACTCCCTTGACCCTTGTCT+AGG | - | chr6.4:17373320-17373339 | MS.gene42005:intron | 50.0% | |
| AATCCGTAAGCAGTGTCCAC+GGG | - | chr6.4:17372803-17372822 | MS.gene42005:intron | 50.0% | |
| ACACACCCTGGTGATTCAAG+AGG | + | chr6.4:17375324-17375343 | None:intergenic | 50.0% | |
| ATGTTGCAACACGTGGCATG+TGG | - | chr6.4:17374042-17374061 | MS.gene42005:intron | 50.0% | |
| CCCAATGGCACGTCAAAATC+TGG | + | chr6.4:17374986-17375005 | None:intergenic | 50.0% | |
| CGAAGCAACATGTCCGAATG+AGG | - | chr6.4:17375231-17375250 | MS.gene42005:intron | 50.0% | |
| CTCCTCCCTTAAAGCGAAGT+TGG | + | chr6.4:17372751-17372770 | None:intergenic | 50.0% | |
| GATCCGATGTAAACACACCC+TGG | + | chr6.4:17375336-17375355 | None:intergenic | 50.0% | |
| GCCACGTGTTGCAACATGAT+TGG | + | chr6.4:17374039-17374058 | None:intergenic | 50.0% | |
| GTTGCTTAACATGTGCCCCA+AGG | - | chr6.4:17374340-17374359 | MS.gene42005:intron | 50.0% | |
| TAGTCTAGTCTCCTCACAGC+AGG | + | chr6.4:17372168-17372187 | None:intergenic | 50.0% | |
| TCCCGTGAGCTTAGTTCAGT+TGG | - | chr6.4:17374505-17374524 | MS.gene42005:intron | 50.0% | |
| TGTTGCAACACGTGGCATGT+GGG | - | chr6.4:17374043-17374062 | MS.gene42005:intron | 50.0% | |
| ! | AAGGATAGTGGTCAAGCTCC+TGG | - | chr6.4:17372258-17372277 | MS.gene42005:CDS | 50.0% |
| ! | CTATCTGGTGCCCACACTTT+TGG | - | chr6.4:17375130-17375149 | MS.gene42005:intron | 50.0% |
| !! | CAACTTCGCTTTAAGGGAGG+AGG | - | chr6.4:17372749-17372768 | MS.gene42005:intron | 50.0% |
| !! | CCCAGATTTTGACGTGCCAT+TGG | - | chr6.4:17374982-17375001 | MS.gene42005:intron | 50.0% |
| !! | TGCCAACTTCGCTTTAAGGG+AGG | - | chr6.4:17372746-17372765 | MS.gene42005:intron | 50.0% |
| AGGCCTTGCTACTCTCTCAG+AGG | + | chr6.4:17372145-17372164 | None:intergenic | 55.0% | |
| CAACCCGTGGACACTGCTTA+CGG | + | chr6.4:17372809-17372828 | None:intergenic | 55.0% | |
| GCGTTGAGGGACTCCTCATT+CGG | + | chr6.4:17375247-17375266 | None:intergenic | 55.0% | |
| TAGTCTAGTCCCCTCACAGC+TGG | + | chr6.4:17372422-17372441 | None:intergenic | 55.0% | |
| TCTAGTCTCCTCACAGCAGG+AGG | + | chr6.4:17372165-17372184 | None:intergenic | 55.0% | |
| ! | GGTGGCATCTATGGTGGAAG+AGG | - | chr6.4:17375534-17375553 | MS.gene42005:CDS | 55.0% |
| TAGCAAGGCCTCCTGCTGTG+AGG | - | chr6.4:17372154-17372173 | MS.gene42005:CDS | 60.0% | |
| TTGGCGAACAGCTTCGCGTG+CGG | + | chr6.4:17372859-17372878 | None:intergenic | 60.0% | |
| TCTGCGCACGAGACAACCCG+TGG | + | chr6.4:17372822-17372841 | None:intergenic | 65.0% | |
| CTTCGCGTGCGGCGATGACG+AGG | + | chr6.4:17372848-17372867 | None:intergenic | 70.0% | |
| GGTGGTCGGGGTTTGAGCCC+CGG | - | chr6.4:17373014-17373033 | MS.gene42005:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 17372075 | 17375582 | 17372075 | ID=MS.gene42005 |
| chr6.4 | mRNA | 17372075 | 17375582 | 17372075 | ID=MS.gene42005.t1;Parent=MS.gene42005 |
| chr6.4 | exon | 17375340 | 17375582 | 17375340 | ID=MS.gene42005.t1.exon1;Parent=MS.gene42005.t1 |
| chr6.4 | CDS | 17375340 | 17375582 | 17375340 | ID=cds.MS.gene42005.t1;Parent=MS.gene42005.t1 |
| chr6.4 | exon | 17374779 | 17374973 | 17374779 | ID=MS.gene42005.t1.exon2;Parent=MS.gene42005.t1 |
| chr6.4 | CDS | 17374779 | 17374973 | 17374779 | ID=cds.MS.gene42005.t1;Parent=MS.gene42005.t1 |
| chr6.4 | exon | 17372075 | 17372683 | 17372075 | ID=MS.gene42005.t1.exon3;Parent=MS.gene42005.t1 |
| chr6.4 | CDS | 17372075 | 17372683 | 17372075 | ID=cds.MS.gene42005.t1;Parent=MS.gene42005.t1 |
| Gene Sequence |
| Protein sequence |
