AlfalfaGEDB | MS.gene45455

M. sativa cultivar XinJiangDaYe / MS.gene45455

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0070647 GO:0071704 GO:0140096 GO:1901564
PFAM: PF04564.18

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45455.t1	RHN79432.1	94.6	441	16	3	1	437	1	437	2.00E-227	798.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45455.t1	Q9SVC6	54.7	444	181	6	1	434	1	434	4.7e-124	446.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45455.t1	A0A396JPS1	94.6	441	16	3	1	437	1	437	1.5e-227	798.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049281	MS.gene45455	0.830378	3.04E-55	-1.69E-46
MS.gene050381	MS.gene45455	0.822145	2.77E-53	-1.69E-46
MS.gene050868	MS.gene45455	-0.801071	1.07E-48	-1.69E-46
MS.gene050883	MS.gene45455	0.800115	1.68E-48	-1.69E-46
MS.gene051044	MS.gene45455	0.849477	3.15E-60	-1.69E-46
MS.gene051127	MS.gene45455	0.839511	1.52E-57	-1.69E-46
MS.gene051138	MS.gene45455	0.843887	1.06E-58	-1.69E-46
MS.gene053420	MS.gene45455	0.803963	2.71E-49	-1.69E-46
MS.gene053488	MS.gene45455	0.807291	5.43E-50	-1.69E-46
MS.gene053561	MS.gene45455	0.808298	3.32E-50	-1.69E-46
MS.gene053887	MS.gene45455	0.83872	2.43E-57	-1.69E-46
MS.gene054056	MS.gene45455	0.814666	1.37E-51	-1.69E-46
MS.gene054959	MS.gene45455	0.816047	6.76E-52	-1.69E-46
MS.gene055124	MS.gene45455	0.80358	3.26E-49	-1.69E-46
MS.gene055139	MS.gene45455	0.801029	1.09E-48	-1.69E-46
MS.gene05589	MS.gene45455	-0.806589	7.64E-50	-1.69E-46
MS.gene055942	MS.gene45455	0.825167	5.43E-54	-1.69E-46
MS.gene056504	MS.gene45455	-0.801948	7.08E-49	-1.69E-46
MS.gene056571	MS.gene45455	0.815977	7.01E-52	-1.69E-46
MS.gene056856	MS.gene45455	0.804397	2.20E-49	-1.69E-46
MS.gene057014	MS.gene45455	0.810486	1.13E-50	-1.69E-46
MS.gene058099	MS.gene45455	0.825323	4.99E-54	-1.69E-46
MS.gene058171	MS.gene45455	0.80149	8.79E-49	-1.69E-46
MS.gene058175	MS.gene45455	0.804973	1.67E-49	-1.69E-46
MS.gene058603	MS.gene45455	0.830511	2.82E-55	-1.69E-46
MS.gene058628	MS.gene45455	0.806388	8.43E-50	-1.69E-46
MS.gene058629	MS.gene45455	0.810684	1.02E-50	-1.69E-46
MS.gene058630	MS.gene45455	0.806239	9.06E-50	-1.69E-46
MS.gene059690	MS.gene45455	0.815467	9.11E-52	-1.69E-46
MS.gene059691	MS.gene45455	0.807112	5.93E-50	-1.69E-46
MS.gene059694	MS.gene45455	0.824189	9.24E-54	-1.69E-46
MS.gene059697	MS.gene45455	0.830976	2.17E-55	-1.69E-46
MS.gene059865	MS.gene45455	-0.802005	6.89E-49	-1.69E-46
MS.gene059953	MS.gene45455	0.80306	4.17E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene45455	MS.gene064492	PPI
MS.gene41036	MS.gene45455	PPI
MS.gene45455	MS.gene071765	PPI
MS.gene45455	MS.gene034756	PPI
MS.gene45455	MS.gene022190	PPI
MS.gene042912	MS.gene45455	PPI
MS.gene066125	MS.gene45455	PPI
MS.gene45455	MS.gene061546	PPI
MS.gene017373	MS.gene45455	PPI
MS.gene45455	MS.gene93972	PPI
MS.gene45455	MS.gene41211	PPI
MS.gene45455	MS.gene26139	PPI
MS.gene41035	MS.gene45455	PPI
MS.gene008306	MS.gene45455	PPI
MS.gene45455	MS.gene72611	PPI
MS.gene061543	MS.gene45455	PPI
MS.gene45455	MS.gene048677	PPI
MS.gene04998	MS.gene45455	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45455.t1	MTR_1g056880	94.104	441	18	3	1	437	1	437	0.0	832
MS.gene45455.t1	MTR_1g056870	92.290	441	26	3	1	437	1	437	0.0	815
MS.gene45455.t1	MTR_1g056840	87.755	441	20	4	1	437	1	411	0.0	767
MS.gene45455.t1	MTR_7g106340	66.055	436	128	7	1	434	1	418	0.0	554
MS.gene45455.t1	MTR_2g087350	54.756	431	165	5	4	434	3	403	3.14e-152	437
MS.gene45455.t1	MTR_1g056910	40.559	429	217	9	4	426	3	399	3.18e-103	313
MS.gene45455.t1	MTR_4g051515	37.071	437	240	8	4	433	3	411	1.95e-92	285
MS.gene45455.t1	MTR_3g065080	32.671	453	235	12	3	433	32	436	4.29e-59	199
MS.gene45455.t1	MTR_5g077510	32.870	432	245	15	4	425	32	428	3.88e-54	187
MS.gene45455.t1	MTR_5g048050	32.168	429	242	13	2	414	20	415	1.35e-52	182
MS.gene45455.t1	MTR_6g071340	31.504	419	240	12	11	414	9	395	1.05e-51	179
MS.gene45455.t1	MTR_4g085720	30.660	424	251	11	1	419	8	393	3.18e-44	159
MS.gene45455.t1	MTR_8g092870	27.828	442	269	14	5	427	8	418	1.87e-32	127
MS.gene45455.t1	MTR_3g095730	27.816	435	276	11	5	427	11	419	5.06e-31	124
MS.gene45455.t1	MTR_4g063800	25.412	425	263	13	11	426	259	638	5.17e-27	114
MS.gene45455.t1	MTR_5g015210	27.007	411	256	9	6	416	66	432	1.35e-25	108
MS.gene45455.t1	MTR_4g485520	27.937	315	169	9	11	311	109	379	3.93e-25	107
MS.gene45455.t1	MTR_4g485520	27.937	315	169	9	11	311	277	547	6.07e-25	108
MS.gene45455.t1	MTR_3g096370	26.118	425	271	15	4	419	7	397	1.88e-24	104
MS.gene45455.t1	MTR_7g078330	31.408	277	161	10	11	270	278	542	6.34e-24	105
MS.gene45455.t1	MTR_7g059405	25.537	419	242	14	11	414	268	631	7.86e-24	104
MS.gene45455.t1	MTR_2g018010	24.651	430	253	13	11	418	296	676	3.27e-23	102
MS.gene45455.t1	MTR_5g083030	24.083	436	267	13	11	423	297	691	1.66e-22	100
MS.gene45455.t1	MTR_4g107010	27.578	417	251	18	11	414	284	662	3.93e-21	96.7
MS.gene45455.t1	MTR_3g085610	25.268	467	282	18	13	437	286	727	4.70e-19	90.5
MS.gene45455.t1	MTR_1g094215	27.596	337	187	12	11	335	68	359	8.22e-19	88.6
MS.gene45455.t1	MTR_8g080280	27.803	446	252	22	13	414	288	707	1.21e-18	89.0
MS.gene45455.t1	MTR_1g094215	27.596	337	187	12	11	335	251	542	2.32e-18	88.2
MS.gene45455.t1	MTR_3g078160	25.653	421	252	15	11	414	279	655	4.03e-18	87.4
MS.gene45455.t1	MTR_3g078160	25.653	421	252	15	11	414	279	655	5.71e-18	87.0
MS.gene45455.t1	MTR_5g034440	26.575	365	237	11	11	371	284	621	1.50e-17	85.5
MS.gene45455.t1	MTR_4g091880	25.735	408	248	13	11	414	9	365	5.86e-17	82.4
MS.gene45455.t1	MTR_4g028960	34.503	171	78	7	2	151	273	430	1.14e-16	82.8
MS.gene45455.t1	MTR_7g097020	44.444	81	38	2	5	85	239	312	3.00e-16	81.6
MS.gene45455.t1	MTR_4g091880	25.123	406	225	13	11	414	9	337	8.41e-16	78.6
MS.gene45455.t1	MTR_7g053260	42.500	80	39	2	1	80	72	144	1.05e-15	79.3
MS.gene45455.t1	MTR_1g069845	46.575	73	32	2	9	81	126	191	1.19e-15	79.7
MS.gene45455.t1	MTR_7g116600	44.681	94	41	4	11	104	82	164	1.99e-15	78.6
MS.gene45455.t1	MTR_1g069845	44.156	77	36	2	5	81	239	308	2.15e-15	79.0
MS.gene45455.t1	MTR_1g069845	44.156	77	36	2	5	81	243	312	2.16e-15	79.0
MS.gene45455.t1	MTR_2g011140	27.070	314	189	9	13	326	21	294	2.49e-15	77.8
MS.gene45455.t1	MTR_1g017770	33.333	168	94	6	5	168	42	195	4.45e-15	77.4
MS.gene45455.t1	MTR_3g115670	25.352	213	117	7	11	203	34	224	9.35e-15	77.0
MS.gene45455.t1	MTR_8g077205	43.011	93	40	4	5	95	159	240	2.66e-14	75.5
MS.gene45455.t1	MTR_8g077205	43.011	93	40	4	5	95	271	352	3.73e-14	75.1
MS.gene45455.t1	MTR_3g078160	45.055	91	42	3	11	100	279	362	9.04e-14	73.6
MS.gene45455.t1	MTR_8g103227	40.449	89	39	3	11	99	399	473	2.92e-13	72.8
MS.gene45455.t1	MTR_5g020570	41.837	98	42	6	1	95	265	350	4.11e-13	72.0
MS.gene45455.t1	MTR_5g020570	41.837	98	42	6	1	95	280	365	4.78e-13	71.6
MS.gene45455.t1	MTR_1g090320	44.595	74	35	2	11	84	519	586	8.08e-13	71.2
MS.gene45455.t1	MTR_1g090320	44.595	74	35	2	11	84	517	584	8.44e-13	71.2
MS.gene45455.t1	MTR_1g079450	40.659	91	43	4	5	95	61	140	9.11e-13	70.1
MS.gene45455.t1	MTR_3g466220	40.476	84	43	2	2	85	228	304	1.54e-12	70.1
MS.gene45455.t1	MTR_3g466220	40.476	84	43	2	2	85	207	283	1.56e-12	70.1
MS.gene45455.t1	MTR_7g117890	41.667	84	42	2	2	85	250	326	3.69e-12	68.9
MS.gene45455.t1	MTR_2g096850	38.750	80	42	2	1	80	583	655	3.33e-11	65.9
MS.gene45455.t1	MTR_2g096850	38.750	80	42	2	1	80	734	806	3.71e-11	65.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene45455.t1	AT3G52450	54.730	444	181	7	1	434	1	434	1.43e-159	457
MS.gene45455.t1	AT2G35930	51.826	438	174	5	1	434	6	410	4.61e-158	453
MS.gene45455.t1	AT3G11840	35.054	465	240	9	3	431	6	444	1.87e-78	251
MS.gene45455.t1	AT3G19380	32.840	405	230	9	1	397	8	378	5.03e-50	175
MS.gene45455.t1	AT5G37490	30.093	432	255	14	4	425	28	422	3.30e-48	171
MS.gene45455.t1	AT1G49780	31.207	439	259	11	1	428	8	414	1.18e-43	158
MS.gene45455.t1	AT1G66160	28.873	426	248	13	2	417	26	406	1.65e-43	158
MS.gene45455.t1	AT1G66160	26.291	426	243	14	2	417	26	390	6.54e-31	123
MS.gene45455.t1	AT5G09800	28.736	435	254	16	10	427	14	409	5.77e-29	117
MS.gene45455.t1	AT3G18710	27.335	439	270	12	5	427	10	415	2.66e-28	116
MS.gene45455.t1	AT1G23030	26.570	414	250	14	11	418	245	610	3.31e-28	117
MS.gene45455.t1	AT2G28830	27.189	434	249	17	2	417	178	562	1.51e-27	115
MS.gene45455.t1	AT3G46510	26.047	430	254	15	2	417	250	629	1.79e-24	106
MS.gene45455.t1	AT5G42340	29.795	292	166	8	11	302	294	546	1.80e-24	106
MS.gene45455.t1	AT5G64660	26.174	447	272	14	5	427	8	420	4.14e-24	104
MS.gene45455.t1	AT1G71020	26.730	419	250	15	11	417	99	472	4.96e-24	104
MS.gene45455.t1	AT3G54850	27.640	322	170	10	7	312	248	522	5.00e-24	105
MS.gene45455.t1	AT1G71020	26.730	419	250	15	11	417	247	620	7.36e-24	104
MS.gene45455.t1	AT3G49810	24.939	413	262	11	6	416	63	429	1.20e-21	97.4
MS.gene45455.t1	AT5G65920	24.105	419	270	10	6	422	59	431	2.78e-21	96.3
MS.gene45455.t1	AT5G65920	24.105	419	270	10	6	422	59	431	2.78e-21	96.3
MS.gene45455.t1	AT1G67530	26.549	452	257	15	13	414	278	704	1.01e-19	92.4
MS.gene45455.t1	AT1G67530	26.549	452	257	15	13	414	278	704	1.01e-19	92.4
MS.gene45455.t1	AT1G67530	26.549	452	257	15	13	414	278	704	1.01e-19	92.4
MS.gene45455.t1	AT1G29340	26.332	319	183	10	5	309	303	583	9.61e-19	89.4
MS.gene45455.t1	AT5G01830	25.243	309	183	9	4	304	271	539	8.42e-18	86.3
MS.gene45455.t1	AT1G10560	25.723	311	182	9	11	309	292	565	1.52e-17	85.5
MS.gene45455.t1	AT1G24330	25.112	446	267	18	13	414	281	703	2.37e-17	85.1
MS.gene45455.t1	AT1G24330	25.112	446	267	18	13	414	281	703	2.37e-17	85.1
MS.gene45455.t1	AT1G67530	47.253	91	36	4	13	103	278	356	3.72e-17	84.3
MS.gene45455.t1	AT1G27910	41.905	105	50	4	13	117	285	378	9.69e-17	83.2
MS.gene45455.t1	AT4G21350	26.364	330	196	9	11	338	9	293	4.46e-16	80.1
MS.gene45455.t1	AT3G02840	25.212	353	217	11	83	418	34	356	1.10e-14	75.9
MS.gene45455.t1	AT3G54790	42.500	80	39	2	5	84	200	272	3.47e-14	75.1
MS.gene45455.t1	AT3G07360	46.667	75	33	2	11	85	78	145	4.01e-14	74.3
MS.gene45455.t1	AT3G54790	42.500	80	39	2	5	84	236	308	4.34e-14	75.1
MS.gene45455.t1	AT3G54790	42.500	80	39	2	5	84	236	308	4.34e-14	75.1
MS.gene45455.t1	AT1G60190	24.225	355	210	12	13	350	284	596	1.52e-13	73.2
MS.gene45455.t1	AT2G23140	40.000	90	43	3	11	100	234	312	2.00e-13	72.8
MS.gene45455.t1	AT2G23140	40.000	90	43	3	11	100	234	312	2.00e-13	72.8
MS.gene45455.t1	AT2G23140	40.000	90	43	3	11	100	237	315	2.04e-13	72.8
MS.gene45455.t1	AT2G23140	40.000	90	43	3	11	100	45	123	2.50e-13	72.4
MS.gene45455.t1	AT2G23140	40.000	90	43	3	11	100	45	123	2.50e-13	72.4
MS.gene45455.t1	AT1G01660	39.474	76	39	2	10	85	501	569	8.76e-13	70.5
MS.gene45455.t1	AT1G01660	39.474	76	39	2	10	85	500	568	8.99e-13	70.5
MS.gene45455.t1	AT2G45920	40.244	82	42	2	6	87	324	398	4.71e-12	67.8
MS.gene45455.t1	AT1G01680	41.558	77	38	2	11	87	237	306	8.62e-12	66.2
MS.gene45455.t1	AT5G18340	37.273	110	56	5	5	114	72	168	3.28e-11	65.5
MS.gene45455.t1	AT1G68940	28.859	149	80	3	11	156	303	428	3.77e-11	65.9
MS.gene45455.t1	AT1G68940	28.859	149	80	3	11	156	250	375	4.39e-11	65.9
MS.gene45455.t1	AT1G68940	28.859	149	80	3	11	156	303	428	4.42e-11	65.9
MS.gene45455.t1	AT5G67340	31.496	127	75	4	5	128	238	355	7.37e-11	64.7
MS.gene45455.t1	AT5G67340	31.496	127	75	4	5	128	238	355	7.37e-11	64.7

Find 52 sgRNAs with CRISPR-Local

Find 71 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTAATTCAACTTGTCGAATT+TGG	0.159621	1.2:+44827029	MS.gene45455:CDS
TTGATGCTTTCTTTGATATT+TGG	0.178417	1.2:-44826989	None:intergenic
TTCATGATTTGTAGTGAAAT+AGG	0.220834	1.2:-44826222	None:intergenic
TCAAGTTGATAGTGGAAATA+AGG	0.246468	1.2:+44827370	MS.gene45455:CDS
TGCACCATGAATTCTTCTTA+TGG	0.299615	1.2:+44826423	MS.gene45455:CDS
TATGAAGCAAGTAAATTAAA+AGG	0.308972	1.2:-44827458	None:intergenic
TTTAGATTGGCTAGCTTTGA+TGG	0.325195	1.2:-44826927	None:intergenic
AAAGCCATGTGAGATGATTT+TGG	0.361012	1.2:+44827127	MS.gene45455:CDS
TCATGATTTGTAGTGAAATA+GGG	0.364276	1.2:-44826221	None:intergenic
ATTCAAGAAATGTTACGAAT+TGG	0.378143	1.2:+44827320	MS.gene45455:CDS
ATGCCTGTTGAGACAGTAAC+TGG	0.387709	1.2:-44826249	None:intergenic
GATTCCATAAGAAGAATTCA+TGG	0.398042	1.2:-44826427	None:intergenic
TTTAATGAGATTATTGCAAA+AGG	0.403896	1.2:+44826842	MS.gene45455:CDS
AGAGTAAAAGCAATTGAATC+AGG	0.420580	1.2:+44827059	MS.gene45455:CDS
TGTTGTTGCAAAGCTTTGTT+TGG	0.427050	1.2:+44827343	MS.gene45455:CDS
TTAAATTGCATTCAAAGTGT+TGG	0.436446	1.2:+44827417	MS.gene45455:CDS
TTTGATGATGATGATGTTGA+AGG	0.466030	1.2:+44826696	MS.gene45455:CDS
GATCCAGTTACTGTCTCAAC+AGG	0.466859	1.2:+44826246	MS.gene45455:CDS
AATTCATGGTGCACCATGCT+TGG	0.475436	1.2:-44826413	None:intergenic
AGCCTACGAAGAGTGTGGTT+TGG	0.488339	1.2:-44826387	None:intergenic
TTAATGAGATTATTGCAAAA+GGG	0.503906	1.2:+44826843	MS.gene45455:CDS
TTGGTTCTTCAAGTTGATAG+TGG	0.510674	1.2:+44827362	MS.gene45455:CDS
CCGACGATTTGTTTCGCTCT+CGG	0.515538	1.2:-44826580	None:intergenic
ATGTTATGTCAATGTGCTGA+TGG	0.528834	1.2:+44827161	MS.gene45455:CDS
AGGGTTTGGATAAGTAAATG+AGG	0.542957	1.2:-44826534	None:intergenic
GAACTCTTAAGCCATGGATG+TGG	0.556866	1.2:+44827191	MS.gene45455:CDS
ATAAGGCAAAGGAGAAAGCA+AGG	0.557452	1.2:+44827387	MS.gene45455:CDS
ATTCTTCTTATGGAATCGAA+AGG	0.560631	1.2:+44826433	MS.gene45455:CDS
AGATTTGAACTCTTAAGCCA+TGG	0.566041	1.2:+44827185	MS.gene45455:CDS
TTCGATGCTTTCTCTGTCGT+AGG	0.572900	1.2:-44826274	None:intergenic
TTGTTTCAAAGAAGATTCTG+AGG	0.575868	1.2:+44827222	MS.gene45455:CDS
CTGATAATTGAAGACTGTAA+AGG	0.581818	1.2:-44826767	None:intergenic
CTTGCTTCATACCCAACAAG+TGG	0.584581	1.2:+44827470	MS.gene45455:CDS
TGATAGTGGAAATAAGGCAA+AGG	0.584798	1.2:+44827376	MS.gene45455:CDS
TGCTAAGAACTCGACTGCAC+CGG	0.586369	1.2:-44826616	None:intergenic
TATTTCACTACAAATCATGA+AGG	0.592910	1.2:+44826224	MS.gene45455:CDS
TGTTTCAAAGAAGATTCTGA+GGG	0.599159	1.2:+44827223	MS.gene45455:CDS
GATTCTGAGGGTTTCCACCA+TGG	0.603397	1.2:+44827235	MS.gene45455:CDS
AGCTCTATCATTAGCCATGG+TGG	0.603908	1.2:-44827249	None:intergenic
CACAGCTCTATCATTAGCCA+TGG	0.609746	1.2:-44827252	None:intergenic
AGTCTTCAATTATCAGAACA+AGG	0.612660	1.2:+44826774	MS.gene45455:CDS
TTCGTAGGCTCATCCAAGCA+TGG	0.613158	1.2:+44826400	MS.gene45455:CDS
CAATAGCTAAACCACATCCA+TGG	0.618916	1.2:-44827202	None:intergenic
CGTCGGTGTATCGAATCAGC+CGG	0.622512	1.2:+44826597	MS.gene45455:CDS
TTTGTAGTGAAATAGGGCAA+AGG	0.623621	1.2:-44826215	None:intergenic
TAAGGCAAAGGAGAAAGCAA+GGG	0.629025	1.2:+44827388	MS.gene45455:CDS
CTCCAAACCACACTCTTCGT+AGG	0.637158	1.2:+44826385	MS.gene45455:CDS
GGATGAGCCTACGAAGAGTG+TGG	0.646535	1.2:-44826392	None:intergenic
TTGCTTCATACCCAACAAGT+GGG	0.653316	1.2:+44827471	MS.gene45455:CDS
AGCACCAAAATCATCTCACA+TGG	0.654659	1.2:-44827131	None:intergenic
CCGAGAGCGAAACAAATCGT+CGG	0.679598	1.2:+44826580	MS.gene45455:CDS
TGGCTAATGATAGAGCTGTG+AGG	0.775637	1.2:+44827255	MS.gene45455:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATGAAGCAAGTAAATTAAA+AGG	-	chr1.2:44827461-44827480	None:intergenic	20.0%
!!	TTAATGAGATTATTGCAAAA+GGG	+	chr1.2:44826843-44826862	MS.gene45455:CDS	20.0%
!!	TTTAATGAGATTATTGCAAA+AGG	+	chr1.2:44826842-44826861	MS.gene45455:CDS	20.0%
!	ATTCAAGAAATGTTACGAAT+TGG	+	chr1.2:44827320-44827339	MS.gene45455:CDS	25.0%
!	TATTTCACTACAAATCATGA+AGG	+	chr1.2:44826224-44826243	MS.gene45455:CDS	25.0%
!	TTAAATTGCATTCAAAGTGT+TGG	+	chr1.2:44827417-44827436	MS.gene45455:CDS	25.0%
!	TTAATTCAACTTGTCGAATT+TGG	+	chr1.2:44827029-44827048	MS.gene45455:CDS	25.0%
!	TTGATGCTTTCTTTGATATT+TGG	-	chr1.2:44826992-44827011	None:intergenic	25.0%
!!	TCATGATTTGTAGTGAAATA+GGG	-	chr1.2:44826224-44826243	None:intergenic	25.0%
!!	TTCATGATTTGTAGTGAAAT+AGG	-	chr1.2:44826225-44826244	None:intergenic	25.0%
!!!	ATTCTCCATTTTTGAAGTTT+AGG	-	chr1.2:44826812-44826831	None:intergenic	25.0%
!!!	GATTGTTTTGAGCTTTTTTA+GGG	-	chr1.2:44826556-44826575	None:intergenic	25.0%
!!!	TTTGAAGAGTTTTTCAATGA+GGG	-	chr1.2:44826490-44826509	None:intergenic	25.0%
!!!	TTTGCTTTTGACTTCAAAAT+AGG	+	chr1.2:44826720-44826739	MS.gene45455:CDS	25.0%
	AACTAACTCGATGAAAAACT+CGG	-	chr1.2:44826955-44826974	None:intergenic	30.0%
	AGAGTAAAAGCAATTGAATC+AGG	+	chr1.2:44827059-44827078	MS.gene45455:CDS	30.0%
	AGTCTTCAATTATCAGAACA+AGG	+	chr1.2:44826774-44826793	MS.gene45455:CDS	30.0%
	ATTCTTCTTATGGAATCGAA+AGG	+	chr1.2:44826433-44826452	MS.gene45455:CDS	30.0%
	CTGATAATTGAAGACTGTAA+AGG	-	chr1.2:44826770-44826789	None:intergenic	30.0%
	GATTCCATAAGAAGAATTCA+TGG	-	chr1.2:44826430-44826449	None:intergenic	30.0%
	TGTTTCAAAGAAGATTCTGA+GGG	+	chr1.2:44827223-44827242	MS.gene45455:CDS	30.0%
	TTGTTTCAAAGAAGATTCTG+AGG	+	chr1.2:44827222-44827241	MS.gene45455:CDS	30.0%
!!	CTTTGAAGAGTTTTTCAATG+AGG	-	chr1.2:44826491-44826510	None:intergenic	30.0%
!!	TCAAGTTGATAGTGGAAATA+AGG	+	chr1.2:44827370-44827389	MS.gene45455:CDS	30.0%
!!	TTTGATGATGATGATGTTGA+AGG	+	chr1.2:44826696-44826715	MS.gene45455:CDS	30.0%
!!!	CGATTGTTTTGAGCTTTTTT+AGG	-	chr1.2:44826557-44826576	None:intergenic	30.0%
!!!	TTTTGAGCTTTTTTAGGGTT+TGG	-	chr1.2:44826551-44826570	None:intergenic	30.0%
	AGATTTGAACTCTTAAGCCA+TGG	+	chr1.2:44827185-44827204	MS.gene45455:CDS	35.0%
	AGGGTTTGGATAAGTAAATG+AGG	-	chr1.2:44826537-44826556	None:intergenic	35.0%
	ATGTTATGTCAATGTGCTGA+TGG	+	chr1.2:44827161-44827180	MS.gene45455:CDS	35.0%
	GAAAAACTCGGTCTTTAGAT+TGG	-	chr1.2:44826943-44826962	None:intergenic	35.0%
	GAAATAGGGCAAAGGAAAAA+TGG	-	chr1.2:44826210-44826229	None:intergenic	35.0%
	GCTCTCCTAAACTTCAAAAA+TGG	+	chr1.2:44826804-44826823	MS.gene45455:CDS	35.0%
	TGCACCATGAATTCTTCTTA+TGG	+	chr1.2:44826423-44826442	MS.gene45455:CDS	35.0%
	TTTGTAGTGAAATAGGGCAA+AGG	-	chr1.2:44826218-44826237	None:intergenic	35.0%
!	AAAGCCATGTGAGATGATTT+TGG	+	chr1.2:44827127-44827146	MS.gene45455:CDS	35.0%
!	CGAAAAATGGCTCTTTTCAT+CGG	+	chr1.2:44826293-44826312	MS.gene45455:CDS	35.0%
!!	ACAGAGAAAGCATCGAAAAA+TGG	+	chr1.2:44826280-44826299	MS.gene45455:CDS	35.0%
!!	TCAATGAGGGTTTTTGTTGT+TGG	-	chr1.2:44826477-44826496	None:intergenic	35.0%
!!	TGATAGTGGAAATAAGGCAA+AGG	+	chr1.2:44827376-44827395	MS.gene45455:CDS	35.0%
!!	TGTTGTTGCAAAGCTTTGTT+TGG	+	chr1.2:44827343-44827362	MS.gene45455:CDS	35.0%
!!	TTGGTTCTTCAAGTTGATAG+TGG	+	chr1.2:44827362-44827381	MS.gene45455:CDS	35.0%
!!	TTTAGATTGGCTAGCTTTGA+TGG	-	chr1.2:44826930-44826949	None:intergenic	35.0%
!!!	GTTTTTGTTGTTGGAGGTTT+TGG	-	chr1.2:44826468-44826487	None:intergenic	35.0%
!!!	TGAGATGATTTTGGTGCTTT+TGG	+	chr1.2:44827136-44827155	MS.gene45455:CDS	35.0%
	AGCACCAAAATCATCTCACA+TGG	-	chr1.2:44827134-44827153	None:intergenic	40.0%
	ATAAGGCAAAGGAGAAAGCA+AGG	+	chr1.2:44827387-44827406	MS.gene45455:CDS	40.0%
	CAATAGCTAAACCACATCCA+TGG	-	chr1.2:44827205-44827224	None:intergenic	40.0%
	TAAGGCAAAGGAGAAAGCAA+GGG	+	chr1.2:44827388-44827407	MS.gene45455:CDS	40.0%
	TTGCTTCATACCCAACAAGT+GGG	+	chr1.2:44827471-44827490	MS.gene45455:CDS	40.0%
!!!	ATGAGGGTTTTTGTTGTTGG+AGG	-	chr1.2:44826474-44826493	None:intergenic	40.0%
!!!	GTGAGTTGTTGTTTTGTGAC+AGG	-	chr1.2:44826333-44826352	None:intergenic	40.0%
	AATTCATGGTGCACCATGCT+TGG	-	chr1.2:44826416-44826435	None:intergenic	45.0%
	AGCTCTATCATTAGCCATGG+TGG	-	chr1.2:44827252-44827271	None:intergenic	45.0%
	ATGCCTGTTGAGACAGTAAC+TGG	-	chr1.2:44826252-44826271	None:intergenic	45.0%
	CACAGCTCTATCATTAGCCA+TGG	-	chr1.2:44827255-44827274	None:intergenic	45.0%
	CTTGCTTCATACCCAACAAG+TGG	+	chr1.2:44827470-44827489	MS.gene45455:CDS	45.0%
	GAACTCTTAAGCCATGGATG+TGG	+	chr1.2:44827191-44827210	MS.gene45455:CDS	45.0%
	GATCCAGTTACTGTCTCAAC+AGG	+	chr1.2:44826246-44826265	MS.gene45455:CDS	45.0%
	TGGCTAATGATAGAGCTGTG+AGG	+	chr1.2:44827255-44827274	MS.gene45455:CDS	45.0%
	TTCGATGCTTTCTCTGTCGT+AGG	-	chr1.2:44826277-44826296	None:intergenic	45.0%
!!!	GTTGTTGGAGGTTTTGGAGT+TGG	-	chr1.2:44826462-44826481	None:intergenic	45.0%
	CCGAGAGCGAAACAAATCGT+CGG	+	chr1.2:44826580-44826599	MS.gene45455:CDS	50.0%
	CTCCAAACCACACTCTTCGT+AGG	+	chr1.2:44826385-44826404	MS.gene45455:CDS	50.0%
	TGCTAAGAACTCGACTGCAC+CGG	-	chr1.2:44826619-44826638	None:intergenic	50.0%
	TTCGTAGGCTCATCCAAGCA+TGG	+	chr1.2:44826400-44826419	MS.gene45455:CDS	50.0%
!	AGCCTACGAAGAGTGTGGTT+TGG	-	chr1.2:44826390-44826409	None:intergenic	50.0%
!	CCGACGATTTGTTTCGCTCT+CGG	-	chr1.2:44826583-44826602	None:intergenic	50.0%
!	GATTCTGAGGGTTTCCACCA+TGG	+	chr1.2:44827235-44827254	MS.gene45455:CDS	50.0%
	CGTCGGTGTATCGAATCAGC+CGG	+	chr1.2:44826597-44826616	MS.gene45455:CDS	55.0%
	GGATGAGCCTACGAAGAGTG+TGG	-	chr1.2:44826395-44826414	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.2	gene	44826183	44827496	44826183	ID=MS.gene45455
chr1.2	mRNA	44826183	44827496	44826183	ID=MS.gene45455.t1;Parent=MS.gene45455
chr1.2	exon	44826183	44827496	44826183	ID=MS.gene45455.t1.exon1;Parent=MS.gene45455.t1
chr1.2	CDS	44826183	44827496	44826183	ID=cds.MS.gene45455.t1;Parent=MS.gene45455.t1

Gene Sequence

>MS.gene45455

ATGAATCAAGATATCGAAGTTACACCATTTTTCCTTTGCCCTATTTCACTACAAATCATGAAGGATCCAGTTACTGTCTCAACAGGCATAACCTACGACAGAGAAAGCATCGAAAAATGGCTCTTTTCATCGGAAAACAAAACATGTCCTGTCACAAAACAACAACTCACACATGATGATGCAAATGATCTCATTATTCTCACTCCAAACCACACTCTTCGTAGGCTCATCCAAGCATGGTGCACCATGAATTCTTCTTATGGAATCGAAAGGATTCCAACTCCAAAACCTCCAACAACAAAAACCCTCATTGAAAAACTCTTCAAAGAAGCTTCTGATTCTTCAGATTCACCTCATTTACTTATCCAAACCCTAAAAAAGCTCAAAACAATCGCTTCCGAGAGCGAAACAAATCGTCGGTGTATCGAATCAGCCGGTGCAGTCGAGTTCTTAGCATCAATAGTAACAAAAAACAACACAAGTTGTTCAGCAACAGAATTAATTGAAGCTAGCTTTGATGATGATGATGTTGAAGGTTTTGCTTTTGACTTCAAAATAGGTGCAGAAGATGAAGCTATAAACATCCTTTACAGTCTTCAATTATCAGAACAAGGTTTGAAAGCTCTCCTAAACTTCAAAAATGGAGAATTTATAGACTCTTTAATGAGATTATTGCAAAAGGGTAACTACGATTCAAGAACATACGCAATCTTTCTGTTGAAATCTATGTCAAAAGTAGCTGATCCATCAAAGCTAGCCAATCTAAAGACCGAGTTTTTCATCGAGTTAGTTCAACTTCTCAAAGACCAAATATCAAAGAAAGCATCAAAAGCAACACTACAAACGTTAATTCAACTTGTCGAATTTGGAAGAAATAGAGTAAAAGCAATTGAATCAGGTTGTGTTTCTGCTTTGATAGAACTTCTTCTTGATTGCAAAGAAAGAAAGCCATGTGAGATGATTTTGGTGCTTTTGGAGATGTTATGTCAATGTGCTGATGGAAGATTTGAACTCTTAAGCCATGGATGTGGTTTAGCTATTGTTTCAAAGAAGATTCTGAGGGTTTCCACCATGGCTAATGATAGAGCTGTGAGGATTCTTCTATCTGTTTCAAGATTTTCTGCAACACATTTTGTTATTCAAGAAATGTTACGAATTGGTGTTGTTGCAAAGCTTTGTTTGGTTCTTCAAGTTGATAGTGGAAATAAGGCAAAGGAGAAAGCAAGGGAGATTCTTAAATTGCATTCAAAGTGTTGGATGAATTCTCATTGCATACCTTTTAATTTACTTGCTTCATACCCAACAAGTGGGTAA

Protein sequence

>MS.gene45455.t1

MNQDIEVTPFFLCPISLQIMKDPVTVSTGITYDRESIEKWLFSSENKTCPVTKQQLTHDDANDLIILTPNHTLRRLIQAWCTMNSSYGIERIPTPKPPTTKTLIEKLFKEASDSSDSPHLLIQTLKKLKTIASESETNRRCIESAGAVEFLASIVTKNNTSCSATELIEASFDDDDVEGFAFDFKIGAEDEAINILYSLQLSEQGLKALLNFKNGEFIDSLMRLLQKGNYDSRTYAIFLLKSMSKVADPSKLANLKTEFFIELVQLLKDQISKKASKATLQTLIQLVEFGRNRVKAIESGCVSALIELLLDCKERKPCEMILVLLEMLCQCADGRFELLSHGCGLAIVSKKILRVSTMANDRAVRILLSVSRFSATHFVIQEMLRIGVVAKLCLVLQVDSGNKAKEKAREILKLHSKCWMNSHCIPFNLLASYPTSG