Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56039.t1 | XP_003588528.2 | 94.8 | 1029 | 24 | 4 | 1 | 1004 | 11 | 1034 | 0.00E+00 | 1998.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56039.t1 | Q8GZ42 | 63.6 | 960 | 313 | 8 | 76 | 1004 | 89 | 1043 | 0.0e+00 | 1246.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56039.t1 | G7I4B1 | 94.8 | 1029 | 24 | 4 | 1 | 1004 | 11 | 1034 | 0.0e+00 | 1998.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene56039.t1 | TR | PHD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene56039 | 0.835626 | 1.50E-56 | -1.69E-46 |
| MS.gene049208 | MS.gene56039 | 0.820381 | 7.07E-53 | -1.69E-46 |
| MS.gene049283 | MS.gene56039 | 0.82341 | 1.41E-53 | -1.69E-46 |
| MS.gene049368 | MS.gene56039 | 0.816074 | 6.67E-52 | -1.69E-46 |
| MS.gene049786 | MS.gene56039 | 0.819163 | 1.34E-52 | -1.69E-46 |
| MS.gene049983 | MS.gene56039 | 0.816227 | 6.17E-52 | -1.69E-46 |
| MS.gene050359 | MS.gene56039 | 0.811375 | 7.22E-51 | -1.69E-46 |
| MS.gene050556 | MS.gene56039 | 0.804544 | 2.05E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene56039 | 0.809219 | 2.11E-50 | -1.69E-46 |
| MS.gene050654 | MS.gene56039 | 0.837175 | 6.07E-57 | -1.69E-46 |
| MS.gene050838 | MS.gene56039 | 0.807541 | 4.81E-50 | -1.69E-46 |
| MS.gene050941 | MS.gene56039 | 0.806605 | 7.58E-50 | -1.69E-46 |
| MS.gene051184 | MS.gene56039 | 0.804127 | 2.51E-49 | -1.69E-46 |
| MS.gene051343 | MS.gene56039 | 0.844155 | 9.01E-59 | -1.69E-46 |
| MS.gene051676 | MS.gene56039 | 0.841309 | 5.14E-58 | -1.69E-46 |
| MS.gene051831 | MS.gene56039 | 0.811814 | 5.80E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene56039 | 0.840373 | 9.04E-58 | -1.69E-46 |
| MS.gene052307 | MS.gene56039 | 0.837017 | 6.66E-57 | -1.69E-46 |
| MS.gene052342 | MS.gene56039 | 0.818795 | 1.63E-52 | -1.69E-46 |
| MS.gene052434 | MS.gene56039 | 0.820045 | 8.44E-53 | -1.69E-46 |
| MS.gene052463 | MS.gene56039 | 0.825181 | 5.39E-54 | -1.69E-46 |
| MS.gene052518 | MS.gene56039 | 0.805961 | 1.04E-49 | -1.69E-46 |
| MS.gene052609 | MS.gene56039 | 0.859748 | 3.34E-63 | -1.69E-46 |
| MS.gene052932 | MS.gene56039 | 0.84733 | 1.24E-59 | -1.69E-46 |
| MS.gene053079 | MS.gene56039 | 0.810731 | 9.96E-51 | -1.69E-46 |
| MS.gene053298 | MS.gene56039 | 0.808374 | 3.20E-50 | -1.69E-46 |
| MS.gene053381 | MS.gene56039 | 0.806056 | 9.90E-50 | -1.69E-46 |
| MS.gene053726 | MS.gene56039 | 0.807735 | 4.37E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene56039 | 0.805358 | 1.39E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene56039 | 0.833635 | 4.76E-56 | -1.69E-46 |
| MS.gene054576 | MS.gene56039 | 0.80118 | 1.02E-48 | -1.69E-46 |
| MS.gene05458 | MS.gene56039 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene054892 | MS.gene56039 | 0.836876 | 7.23E-57 | -1.69E-46 |
| MS.gene054893 | MS.gene56039 | 0.834223 | 3.39E-56 | -1.69E-46 |
| MS.gene054943 | MS.gene56039 | 0.814709 | 1.34E-51 | -1.69E-46 |
| MS.gene055311 | MS.gene56039 | 0.852028 | 6.04E-61 | -1.69E-46 |
| MS.gene055313 | MS.gene56039 | 0.853307 | 2.61E-61 | -1.69E-46 |
| MS.gene055314 | MS.gene56039 | 0.835821 | 1.34E-56 | -1.69E-46 |
| MS.gene055513 | MS.gene56039 | 0.875635 | 2.64E-68 | -1.69E-46 |
| MS.gene055603 | MS.gene56039 | 0.831044 | 2.09E-55 | -1.69E-46 |
| MS.gene055864 | MS.gene56039 | 0.806746 | 7.08E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene56039 | 0.852728 | 3.82E-61 | -1.69E-46 |
| MS.gene056181 | MS.gene56039 | 0.832472 | 9.27E-56 | -1.69E-46 |
| MS.gene056403 | MS.gene56039 | 0.807056 | 6.09E-50 | -1.69E-46 |
| MS.gene056605 | MS.gene56039 | 0.80292 | 4.46E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene56039 | 0.838352 | 3.03E-57 | -1.69E-46 |
| MS.gene056787 | MS.gene56039 | 0.833825 | 4.27E-56 | -1.69E-46 |
| MS.gene056831 | MS.gene56039 | 0.810464 | 1.14E-50 | -1.69E-46 |
| MS.gene056901 | MS.gene56039 | 0.806271 | 8.92E-50 | -1.69E-46 |
| MS.gene056986 | MS.gene56039 | 0.814919 | 1.21E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene56039 | 0.824537 | 7.65E-54 | -1.69E-46 |
| MS.gene057155 | MS.gene56039 | 0.830196 | 3.36E-55 | -1.69E-46 |
| MS.gene057360 | MS.gene56039 | 0.80055 | 1.37E-48 | -1.69E-46 |
| MS.gene057890 | MS.gene56039 | -0.802629 | 5.12E-49 | -1.69E-46 |
| MS.gene057919 | MS.gene56039 | 0.806989 | 6.29E-50 | -1.69E-46 |
| MS.gene058289 | MS.gene56039 | 0.812189 | 4.81E-51 | -1.69E-46 |
| MS.gene058429 | MS.gene56039 | 0.817481 | 3.22E-52 | -1.69E-46 |
| MS.gene058592 | MS.gene56039 | 0.803566 | 3.28E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene56039 | 0.836205 | 1.07E-56 | -1.69E-46 |
| MS.gene058639 | MS.gene56039 | 0.847895 | 8.65E-60 | -1.69E-46 |
| MS.gene058758 | MS.gene56039 | 0.816797 | 4.60E-52 | -1.69E-46 |
| MS.gene059144 | MS.gene56039 | 0.839039 | 2.01E-57 | -1.69E-46 |
| MS.gene059170 | MS.gene56039 | 0.818353 | 2.05E-52 | -1.69E-46 |
| MS.gene059439 | MS.gene56039 | 0.807266 | 5.50E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene56039 | -0.801676 | 8.05E-49 | -1.69E-46 |
| MS.gene059965 | MS.gene56039 | 0.827816 | 1.27E-54 | -1.69E-46 |
| MS.gene06010 | MS.gene56039 | 0.817651 | 2.95E-52 | -1.69E-46 |
| MS.gene06011 | MS.gene56039 | 0.821759 | 3.40E-53 | -1.69E-46 |
| MS.gene060637 | MS.gene56039 | 0.811114 | 8.23E-51 | -1.69E-46 |
| MS.gene060777 | MS.gene56039 | 0.814462 | 1.52E-51 | -1.69E-46 |
| MS.gene060932 | MS.gene56039 | 0.817829 | 2.69E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene56039 | 0.860526 | 1.94E-63 | -1.69E-46 |
| MS.gene060935 | MS.gene56039 | 0.831238 | 1.87E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene56039 | 0.846801 | 1.73E-59 | -1.69E-46 |
| MS.gene061100 | MS.gene56039 | 0.833905 | 4.08E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56039.t1 | MTR_1g008230 | 95.918 | 1029 | 12 | 4 | 1 | 1004 | 11 | 1034 | 0.0 | 2034 |
| MS.gene56039.t1 | MTR_1g008230 | 98.543 | 755 | 7 | 1 | 250 | 1004 | 6 | 756 | 0.0 | 1553 |
| MS.gene56039.t1 | MTR_3g091310 | 68.338 | 1077 | 244 | 22 | 1 | 1004 | 11 | 1063 | 0.0 | 1413 |
| MS.gene56039.t1 | MTR_3g091310 | 72.217 | 979 | 196 | 17 | 82 | 1004 | 11 | 969 | 0.0 | 1384 |
| MS.gene56039.t1 | MTR_7g117355 | 53.053 | 950 | 376 | 12 | 83 | 1004 | 57 | 964 | 0.0 | 963 |
| MS.gene56039.t1 | MTR_8g027725 | 56.647 | 835 | 312 | 8 | 196 | 1004 | 124 | 934 | 0.0 | 962 |
| MS.gene56039.t1 | MTR_8g027725 | 55.765 | 850 | 311 | 9 | 196 | 1004 | 124 | 949 | 0.0 | 957 |
| MS.gene56039.t1 | MTR_7g021365 | 32.438 | 484 | 258 | 16 | 560 | 1004 | 592 | 1045 | 6.00e-59 | 220 |
| MS.gene56039.t1 | MTR_1g012910 | 30.570 | 386 | 193 | 15 | 645 | 1004 | 172 | 508 | 3.89e-36 | 144 |
| MS.gene56039.t1 | MTR_1g012910 | 30.570 | 386 | 193 | 15 | 645 | 1004 | 335 | 671 | 1.00e-35 | 145 |
| MS.gene56039.t1 | MTR_1g012890 | 47.183 | 142 | 68 | 4 | 868 | 1004 | 229 | 368 | 2.60e-32 | 130 |
| MS.gene56039.t1 | MTR_2g036060 | 42.754 | 138 | 74 | 3 | 858 | 994 | 1028 | 1161 | 2.97e-27 | 120 |
| MS.gene56039.t1 | MTR_2g036060 | 42.754 | 138 | 74 | 3 | 858 | 994 | 1053 | 1186 | 3.64e-27 | 120 |
| MS.gene56039.t1 | MTR_0097s0020 | 54.878 | 82 | 37 | 0 | 556 | 637 | 1 | 82 | 4.49e-25 | 100 |
| MS.gene56039.t1 | MTR_2g047220 | 54.878 | 82 | 37 | 0 | 556 | 637 | 1 | 82 | 4.49e-25 | 100 |
| MS.gene56039.t1 | MTR_1g008250 | 90.000 | 50 | 5 | 0 | 955 | 1004 | 2 | 51 | 6.41e-25 | 98.6 |
| MS.gene56039.t1 | MTR_3g073320 | 36.111 | 180 | 98 | 7 | 572 | 737 | 280 | 456 | 5.69e-24 | 109 |
| MS.gene56039.t1 | MTR_3g073320 | 27.426 | 237 | 142 | 10 | 565 | 780 | 1024 | 1251 | 5.73e-15 | 80.5 |
| MS.gene56039.t1 | MTR_3g073320 | 36.111 | 180 | 98 | 7 | 572 | 737 | 293 | 469 | 7.23e-24 | 109 |
| MS.gene56039.t1 | MTR_3g073320 | 31.156 | 199 | 96 | 9 | 565 | 729 | 1037 | 1228 | 2.15e-14 | 78.6 |
| MS.gene56039.t1 | MTR_7g021365 | 33.333 | 195 | 118 | 4 | 560 | 743 | 592 | 785 | 2.13e-23 | 107 |
| MS.gene56039.t1 | MTR_5g016870 | 33.974 | 156 | 96 | 3 | 843 | 998 | 695 | 843 | 2.67e-21 | 100 |
| MS.gene56039.t1 | MTR_1g086980 | 36.800 | 125 | 77 | 2 | 860 | 984 | 480 | 602 | 1.04e-20 | 98.2 |
| MS.gene56039.t1 | MTR_1g086980 | 36.800 | 125 | 77 | 2 | 860 | 984 | 608 | 730 | 1.75e-20 | 97.8 |
| MS.gene56039.t1 | MTR_1g086980 | 36.800 | 125 | 77 | 2 | 860 | 984 | 670 | 792 | 1.78e-20 | 97.8 |
| MS.gene56039.t1 | MTR_1g086980 | 36.800 | 125 | 77 | 2 | 860 | 984 | 660 | 782 | 1.80e-20 | 97.8 |
| MS.gene56039.t1 | MTR_1g086980 | 36.800 | 125 | 77 | 2 | 860 | 984 | 680 | 802 | 1.83e-20 | 97.8 |
| MS.gene56039.t1 | MTR_1g086980 | 36.800 | 125 | 77 | 2 | 860 | 984 | 629 | 751 | 1.88e-20 | 97.8 |
| MS.gene56039.t1 | MTR_1g098370 | 36.424 | 151 | 92 | 3 | 854 | 1003 | 90 | 237 | 7.85e-20 | 94.7 |
| MS.gene56039.t1 | MTR_1g098000 | 35.762 | 151 | 93 | 3 | 854 | 1003 | 87 | 234 | 2.40e-19 | 93.2 |
| MS.gene56039.t1 | MTR_0071s0100 | 26.586 | 331 | 202 | 11 | 682 | 1003 | 50 | 348 | 2.71e-18 | 88.6 |
| MS.gene56039.t1 | MTR_7g055660 | 33.582 | 134 | 87 | 2 | 851 | 984 | 571 | 702 | 2.88e-17 | 87.4 |
| MS.gene56039.t1 | MTR_2g047818 | 52.174 | 69 | 33 | 0 | 556 | 624 | 1 | 69 | 2.00e-16 | 75.1 |
| MS.gene56039.t1 | MTR_6g059310 | 36.923 | 130 | 77 | 3 | 873 | 1001 | 123 | 248 | 4.83e-15 | 78.2 |
| MS.gene56039.t1 | MTR_6g059310 | 36.923 | 130 | 77 | 3 | 873 | 1001 | 123 | 248 | 5.47e-15 | 77.8 |
| MS.gene56039.t1 | MTR_7g109560 | 34.959 | 123 | 76 | 3 | 862 | 983 | 612 | 731 | 6.37e-15 | 80.1 |
| MS.gene56039.t1 | MTR_3g088625 | 30.573 | 157 | 94 | 4 | 854 | 1003 | 1210 | 1358 | 2.00e-14 | 79.0 |
| MS.gene56039.t1 | MTR_3g088625 | 30.573 | 157 | 94 | 4 | 854 | 1003 | 1316 | 1464 | 2.00e-14 | 79.0 |
| MS.gene56039.t1 | MTR_8g042510 | 31.638 | 177 | 104 | 7 | 572 | 737 | 130 | 300 | 4.19e-14 | 75.1 |
| MS.gene56039.t1 | MTR_8g078490 | 34.722 | 144 | 75 | 4 | 873 | 1000 | 1109 | 1249 | 2.59e-13 | 75.1 |
| MS.gene56039.t1 | MTR_0097s0010 | 51.724 | 58 | 28 | 0 | 556 | 613 | 1 | 58 | 4.34e-13 | 65.9 |
| MS.gene56039.t1 | MTR_5g018850 | 33.333 | 150 | 69 | 7 | 873 | 1000 | 1363 | 1503 | 8.65e-13 | 73.6 |
| MS.gene56039.t1 | MTR_5g035900 | 60.000 | 50 | 13 | 1 | 435 | 477 | 1 | 50 | 2.29e-12 | 62.8 |
| MS.gene56039.t1 | MTR_1g086980 | 34.066 | 91 | 59 | 1 | 860 | 950 | 670 | 759 | 3.59e-11 | 67.8 |
| MS.gene56039.t1 | MTR_7g088370 | 30.818 | 159 | 83 | 5 | 868 | 1003 | 550 | 704 | 7.86e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene56039.t1 | AT5G53430 | 60.363 | 1047 | 341 | 13 | 11 | 1004 | 18 | 1043 | 0.0 | 1252 |
| MS.gene56039.t1 | AT4G27910 | 60.151 | 1059 | 325 | 15 | 1 | 1004 | 11 | 1027 | 0.0 | 1238 |
| MS.gene56039.t1 | AT3G61740 | 49.429 | 963 | 385 | 16 | 87 | 1004 | 77 | 982 | 0.0 | 926 |
| MS.gene56039.t1 | AT3G61740 | 47.691 | 996 | 389 | 16 | 87 | 1004 | 77 | 1018 | 0.0 | 911 |
| MS.gene56039.t1 | AT1G05830 | 32.609 | 506 | 296 | 15 | 523 | 1004 | 575 | 1059 | 3.40e-69 | 251 |
| MS.gene56039.t1 | AT1G05830 | 32.609 | 506 | 296 | 15 | 523 | 1004 | 575 | 1059 | 3.40e-69 | 251 |
| MS.gene56039.t1 | AT1G05830 | 32.609 | 506 | 296 | 15 | 523 | 1004 | 575 | 1059 | 3.40e-69 | 251 |
| MS.gene56039.t1 | AT1G05830 | 32.609 | 506 | 296 | 15 | 523 | 1004 | 575 | 1059 | 3.40e-69 | 251 |
| MS.gene56039.t1 | AT2G31650 | 32.150 | 507 | 293 | 16 | 523 | 1004 | 558 | 1038 | 2.79e-67 | 245 |
| MS.gene56039.t1 | AT5G42400 | 42.500 | 160 | 79 | 5 | 846 | 1004 | 1241 | 1388 | 8.53e-30 | 129 |
| MS.gene56039.t1 | AT5G42400 | 42.500 | 160 | 79 | 5 | 846 | 1004 | 1241 | 1388 | 8.53e-30 | 129 |
| MS.gene56039.t1 | AT5G42400 | 42.500 | 160 | 79 | 5 | 846 | 1004 | 1241 | 1388 | 8.53e-30 | 129 |
| MS.gene56039.t1 | AT5G42400 | 42.500 | 160 | 79 | 5 | 846 | 1004 | 1241 | 1388 | 8.53e-30 | 129 |
| MS.gene56039.t1 | AT5G42400 | 42.500 | 160 | 79 | 5 | 846 | 1004 | 1241 | 1388 | 8.53e-30 | 129 |
| MS.gene56039.t1 | AT5G42400 | 42.500 | 160 | 79 | 5 | 846 | 1004 | 1241 | 1388 | 8.53e-30 | 129 |
| MS.gene56039.t1 | AT5G42400 | 42.500 | 160 | 79 | 5 | 846 | 1004 | 1241 | 1388 | 8.53e-30 | 129 |
| MS.gene56039.t1 | AT5G42400 | 42.500 | 160 | 79 | 5 | 846 | 1004 | 1241 | 1388 | 8.53e-30 | 129 |
| MS.gene56039.t1 | AT2G23380 | 35.256 | 156 | 92 | 4 | 843 | 997 | 506 | 653 | 3.18e-21 | 100 |
| MS.gene56039.t1 | AT2G23380 | 35.256 | 156 | 92 | 4 | 843 | 997 | 733 | 880 | 5.18e-21 | 99.8 |
| MS.gene56039.t1 | AT1G02580 | 36.508 | 126 | 78 | 2 | 861 | 986 | 543 | 666 | 1.22e-19 | 95.1 |
| MS.gene56039.t1 | AT1G77800 | 34.132 | 167 | 95 | 6 | 583 | 737 | 292 | 455 | 1.59e-19 | 95.5 |
| MS.gene56039.t1 | AT1G77800 | 30.851 | 188 | 99 | 9 | 543 | 715 | 923 | 1094 | 5.75e-16 | 84.0 |
| MS.gene56039.t1 | AT1G77800 | 34.132 | 167 | 95 | 6 | 583 | 737 | 292 | 455 | 1.60e-19 | 95.5 |
| MS.gene56039.t1 | AT1G77800 | 30.851 | 188 | 99 | 9 | 543 | 715 | 992 | 1163 | 5.28e-16 | 84.0 |
| MS.gene56039.t1 | AT1G77800 | 34.132 | 167 | 95 | 6 | 583 | 737 | 292 | 455 | 1.60e-19 | 95.5 |
| MS.gene56039.t1 | AT1G77800 | 30.851 | 188 | 99 | 9 | 543 | 715 | 992 | 1163 | 5.28e-16 | 84.0 |
| MS.gene56039.t1 | AT1G77800 | 34.132 | 167 | 95 | 6 | 583 | 737 | 292 | 455 | 1.67e-19 | 95.5 |
| MS.gene56039.t1 | AT1G77800 | 30.851 | 188 | 99 | 9 | 543 | 715 | 992 | 1163 | 6.44e-16 | 83.6 |
| MS.gene56039.t1 | AT1G77800 | 34.132 | 167 | 95 | 6 | 583 | 737 | 292 | 455 | 1.97e-19 | 95.1 |
| MS.gene56039.t1 | AT1G77800 | 30.851 | 188 | 99 | 9 | 543 | 715 | 965 | 1136 | 7.08e-16 | 83.6 |
| MS.gene56039.t1 | AT4G02020 | 35.200 | 125 | 79 | 2 | 860 | 984 | 705 | 827 | 2.70e-19 | 94.4 |
| MS.gene56039.t1 | AT3G14740 | 35.404 | 161 | 93 | 6 | 572 | 724 | 153 | 310 | 2.83e-19 | 90.9 |
| MS.gene56039.t1 | AT3G14740 | 35.404 | 161 | 93 | 6 | 572 | 724 | 153 | 310 | 3.16e-19 | 90.9 |
| MS.gene56039.t1 | AT1G76710 | 40.000 | 140 | 76 | 4 | 865 | 1003 | 96 | 228 | 5.13e-19 | 92.4 |
| MS.gene56039.t1 | AT1G76710 | 40.000 | 140 | 76 | 4 | 865 | 1003 | 96 | 228 | 5.33e-19 | 92.0 |
| MS.gene56039.t1 | AT1G76710 | 40.000 | 140 | 76 | 4 | 865 | 1003 | 96 | 228 | 5.33e-19 | 92.0 |
| MS.gene56039.t1 | AT1G76710 | 40.000 | 140 | 76 | 4 | 865 | 1003 | 96 | 228 | 5.46e-19 | 92.0 |
| MS.gene56039.t1 | AT4G30860 | 35.606 | 132 | 80 | 3 | 873 | 1003 | 337 | 464 | 1.12e-16 | 84.7 |
| MS.gene56039.t1 | AT3G59960 | 37.879 | 132 | 73 | 4 | 873 | 1001 | 122 | 247 | 3.05e-16 | 80.9 |
| MS.gene56039.t1 | AT3G59960 | 37.879 | 132 | 73 | 4 | 873 | 1001 | 122 | 247 | 3.05e-16 | 80.9 |
| MS.gene56039.t1 | AT3G59960 | 37.879 | 132 | 73 | 4 | 873 | 1001 | 122 | 247 | 3.05e-16 | 80.9 |
| MS.gene56039.t1 | AT3G59960 | 37.879 | 132 | 73 | 4 | 873 | 1001 | 122 | 247 | 4.46e-16 | 81.3 |
| MS.gene56039.t1 | AT1G77800 | 30.851 | 188 | 99 | 9 | 543 | 715 | 942 | 1113 | 5.73e-16 | 84.0 |
| MS.gene56039.t1 | AT1G77800 | 29.032 | 186 | 98 | 6 | 583 | 737 | 292 | 474 | 6.31e-14 | 77.0 |
| MS.gene56039.t1 | AT1G77800 | 30.851 | 188 | 99 | 9 | 543 | 715 | 942 | 1113 | 6.03e-16 | 84.0 |
| MS.gene56039.t1 | AT1G77800 | 29.032 | 186 | 98 | 6 | 583 | 737 | 292 | 474 | 6.53e-14 | 77.0 |
| MS.gene56039.t1 | AT2G44150 | 36.154 | 130 | 78 | 3 | 873 | 1001 | 127 | 252 | 3.52e-15 | 79.0 |
| MS.gene56039.t1 | AT2G23740 | 36.129 | 155 | 79 | 5 | 868 | 1004 | 1223 | 1375 | 1.15e-14 | 79.7 |
| MS.gene56039.t1 | AT2G23740 | 36.129 | 155 | 79 | 5 | 868 | 1004 | 1230 | 1382 | 1.15e-14 | 79.7 |
| MS.gene56039.t1 | AT2G23740 | 36.129 | 155 | 79 | 5 | 868 | 1004 | 1230 | 1382 | 1.15e-14 | 79.7 |
| MS.gene56039.t1 | AT2G23740 | 36.129 | 155 | 79 | 5 | 868 | 1004 | 1230 | 1382 | 1.15e-14 | 79.7 |
| MS.gene56039.t1 | AT5G28340 | 52.381 | 63 | 29 | 1 | 339 | 401 | 15 | 76 | 1.14e-13 | 75.1 |
| MS.gene56039.t1 | AT2G35160 | 38.136 | 118 | 61 | 3 | 873 | 984 | 622 | 733 | 1.45e-13 | 75.5 |
| MS.gene56039.t1 | AT2G35160 | 38.136 | 118 | 61 | 3 | 873 | 984 | 658 | 769 | 1.54e-13 | 75.5 |
| MS.gene56039.t1 | AT2G35160 | 38.136 | 118 | 61 | 3 | 873 | 984 | 658 | 769 | 1.54e-13 | 75.5 |
| MS.gene56039.t1 | AT2G35160 | 38.136 | 118 | 61 | 3 | 873 | 984 | 658 | 769 | 1.54e-13 | 75.5 |
| MS.gene56039.t1 | AT2G35160 | 38.136 | 118 | 61 | 3 | 873 | 984 | 658 | 769 | 1.54e-13 | 75.5 |
| MS.gene56039.t1 | AT1G77300 | 30.070 | 143 | 85 | 4 | 868 | 1003 | 1032 | 1166 | 1.32e-12 | 72.8 |
| MS.gene56039.t1 | AT1G77300 | 30.070 | 143 | 85 | 4 | 868 | 1003 | 1032 | 1166 | 1.37e-12 | 72.8 |
| MS.gene56039.t1 | AT2G22740 | 30.769 | 169 | 73 | 4 | 873 | 1003 | 627 | 789 | 2.74e-12 | 71.6 |
| MS.gene56039.t1 | AT2G22740 | 30.769 | 169 | 73 | 4 | 873 | 1003 | 627 | 789 | 2.74e-12 | 71.6 |
| MS.gene56039.t1 | AT4G02020 | 32.979 | 94 | 62 | 1 | 860 | 953 | 705 | 797 | 4.15e-12 | 70.9 |
Find 225 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAGAAAATTCATGAATT+AGG | 0.216902 | 1.3:-11563654 | None:intergenic |
| CAGAGAACAGTGACCTTCTT+TGG | 0.224399 | 1.3:+11570705 | None:intergenic |
| CGGCACCTAGCAGCAGAAAA+TGG | 0.228335 | 1.3:+11566308 | None:intergenic |
| ATGATCCTTGCATAGCAATT+TGG | 0.261106 | 1.3:+11564163 | None:intergenic |
| GACTTTGCATGGGTGAAGTA+TGG | 0.264743 | 1.3:-11572330 | MS.gene56039:CDS |
| GAAGCTGACTTACCTTCTTC+TGG | 0.270047 | 1.3:+11571970 | None:intergenic |
| TTGTGGCAGGTGATATAGTT+TGG | 0.291491 | 1.3:-11572634 | MS.gene56039:CDS |
| GGCGCAGCGTTGCCGATCTA+AGG | 0.299987 | 1.3:-11564677 | MS.gene56039:CDS |
| AAAACAAGTATTCAGGTTAA+AGG | 0.304307 | 1.3:-11569817 | MS.gene56039:CDS |
| AACCTCGCGCGGCCGTCTTC+AGG | 0.305107 | 1.3:-11573005 | MS.gene56039:CDS |
| CGGCAGAGGGCGAGGGTATT+CGG | 0.313975 | 1.3:-11572798 | MS.gene56039:CDS |
| ATCTGTTTCTTGTAGAATCT+TGG | 0.324342 | 1.3:-11571041 | MS.gene56039:intron |
| ATCACAATTGCAGGCCAAAA+TGG | 0.325083 | 1.3:+11572590 | None:intergenic |
| GGAACGCCTTCATCACTTAC+AGG | 0.327035 | 1.3:-11565534 | MS.gene56039:intron |
| TTGAATTCATCTGGCTCATC+AGG | 0.327517 | 1.3:+11563704 | None:intergenic |
| TCATGTTCGGTGTTATCTTC+TGG | 0.329697 | 1.3:+11566332 | None:intergenic |
| GTAATGGATAAACCTTAAAA+AGG | 0.335499 | 1.3:+11571150 | None:intergenic |
| TGTTGTCTTTGTCCTGTAAA+AGG | 0.339460 | 1.3:-11568438 | MS.gene56039:intron |
| CAGGTTCCAAATTTAGAAAC+TGG | 0.340357 | 1.3:-11569840 | MS.gene56039:CDS |
| GCGGCATATGTAAGAAAGTT+TGG | 0.341078 | 1.3:-11571367 | MS.gene56039:CDS |
| AATCTTCTCCGTTTGCGATT+CGG | 0.348643 | 1.3:+11573262 | None:intergenic |
| AAACTGGAAAACAAGTATTC+AGG | 0.350556 | 1.3:-11569824 | MS.gene56039:CDS |
| TTGGGCTAAGGCGAGGAAAA+AGG | 0.364610 | 1.3:-11572615 | MS.gene56039:CDS |
| ATGATTCAGTTATTGTCAAT+TGG | 0.376221 | 1.3:-11572964 | MS.gene56039:CDS |
| CTACTGATATCGATCCGTTA+TGG | 0.381071 | 1.3:-11568126 | MS.gene56039:CDS |
| TGTGGCAGGTGATATAGTTT+GGG | 0.386430 | 1.3:-11572633 | MS.gene56039:CDS |
| TGTATAATCAAAACAGTGTC+TGG | 0.388765 | 1.3:+11566458 | None:intergenic |
| ATCCAAAATAAGAGAAAAGT+TGG | 0.389775 | 1.3:-11566401 | MS.gene56039:CDS |
| CTTGTTCACCACGATATTCA+AGG | 0.391426 | 1.3:+11564703 | None:intergenic |
| TCACCTGCCACAAAATCTTC+TGG | 0.392228 | 1.3:+11572644 | None:intergenic |
| CCTCACCTCCATGCGATAAC+CGG | 0.392893 | 1.3:+11567563 | None:intergenic |
| GAATAGTTCTTCGTGCAAAT+AGG | 0.394924 | 1.3:+11565372 | None:intergenic |
| CAGAGAAACAAGAAACTTAA+CGG | 0.396337 | 1.3:-11573217 | MS.gene56039:CDS |
| CAAGGGACTTTGAATTCATC+TGG | 0.400557 | 1.3:+11563695 | None:intergenic |
| AATTTCGTCAAACAGAATAA+AGG | 0.400933 | 1.3:-11566369 | MS.gene56039:CDS |
| GGGAAGAATGGAACTGGAAA+TGG | 0.402090 | 1.3:-11572824 | MS.gene56039:CDS |
| GTAGTTGATGCAACTGATAA+AGG | 0.404950 | 1.3:-11564416 | MS.gene56039:CDS |
| TACTGATATCGATCCGTTAT+GGG | 0.411107 | 1.3:-11568125 | MS.gene56039:CDS |
| AATGTGGCCGCGACGTCTGC+AGG | 0.411358 | 1.3:-11572923 | MS.gene56039:CDS |
| AACGATGTGCTGTATGTAGA+TGG | 0.415395 | 1.3:-11569076 | MS.gene56039:CDS |
| TGGTGTTGCTGCTACTAGTA+AGG | 0.417535 | 1.3:-11572744 | MS.gene56039:CDS |
| AATGGAACCGGCAGAGGGCG+AGG | 0.417953 | 1.3:-11572806 | MS.gene56039:CDS |
| ACCTTCACGAAAGAATTTGA+TGG | 0.418537 | 1.3:+11568016 | None:intergenic |
| GCACCGTTGAGAAGATTTAA+CGG | 0.421318 | 1.3:+11573184 | None:intergenic |
| TGAGAAAATGGAGCCTGCTT+TGG | 0.422218 | 1.3:-11568053 | MS.gene56039:CDS |
| GAGGTGTTGCATAAGAATTT+TGG | 0.422799 | 1.3:-11572764 | MS.gene56039:CDS |
| GGGTTCATGTCACTTGTGCC+TGG | 0.424544 | 1.3:-11568105 | MS.gene56039:CDS |
| ATCAAAACAGTGTCTGGATT+GGG | 0.425217 | 1.3:+11566464 | None:intergenic |
| ATAGCATCAATCACAATTGC+AGG | 0.425693 | 1.3:+11572581 | None:intergenic |
| CGAGTGTGCTTTGGTAGATC+AGG | 0.436255 | 1.3:-11565410 | MS.gene56039:CDS |
| CCATGATATCGCTGGAACAA+TGG | 0.437444 | 1.3:-11569792 | MS.gene56039:CDS |
| CGTTGCTGCGACTGTGGCAC+CGG | 0.438273 | 1.3:-11573125 | MS.gene56039:CDS |
| AACTATTCAAGAAGGAGAAA+TGG | 0.442553 | 1.3:-11565357 | MS.gene56039:intron |
| GTAAATACAGTTGCATAGTT+CGG | 0.445265 | 1.3:-11566732 | MS.gene56039:intron |
| GTTGTCTCTGACGACGGAAA+AGG | 0.446963 | 1.3:-11573079 | MS.gene56039:CDS |
| GAGAAAATGGAGCCTGCTTT+GGG | 0.448422 | 1.3:-11568052 | MS.gene56039:CDS |
| AATGCGGTGGCTGGTAATAA+TGG | 0.448850 | 1.3:-11572044 | MS.gene56039:CDS |
| CCATTGTTCCAGCGATATCA+TGG | 0.453895 | 1.3:+11569792 | None:intergenic |
| TACTGCTACGCGGCCGCCGT+TGG | 0.456956 | 1.3:-11573032 | MS.gene56039:CDS |
| CATGATATCGCTGGAACAAT+GGG | 0.458105 | 1.3:-11569791 | MS.gene56039:intron |
| TGCAATGGGAAGGGGAAGAA+TGG | 0.462225 | 1.3:-11572836 | MS.gene56039:CDS |
| ATCAATCGGATAGCGGAAGT+TGG | 0.464352 | 1.3:-11571343 | MS.gene56039:CDS |
| GAAAACGAACGAGTGTGCTT+TGG | 0.465620 | 1.3:-11565419 | MS.gene56039:CDS |
| GACTTCTCAGATGCTACAGT+TGG | 0.466119 | 1.3:-11569331 | MS.gene56039:intron |
| TATGTAGATGGGTTGAAGAT+TGG | 0.467381 | 1.3:-11569064 | MS.gene56039:CDS |
| ATTGTCAATTGGAGGAAAGA+TGG | 0.470611 | 1.3:-11572953 | MS.gene56039:CDS |
| ACTGGAAATGGAACCGGCAG+AGG | 0.470891 | 1.3:-11572812 | MS.gene56039:CDS |
| GTAGTCCACTTAGCACAAAC+AGG | 0.473047 | 1.3:+11569101 | None:intergenic |
| ATGTAGATGGGTTGAAGATT+GGG | 0.473122 | 1.3:-11569063 | MS.gene56039:CDS |
| GGCACCTAGCAGCAGAAAAT+GGG | 0.475782 | 1.3:+11566309 | None:intergenic |
| TTATGCTTACAAGTGAAGAC+AGG | 0.476327 | 1.3:+11570656 | None:intergenic |
| TTGATTATACAAACCCCTCA+TGG | 0.476929 | 1.3:-11566446 | MS.gene56039:CDS |
| CGAATACCCTCGCCCTCTGC+CGG | 0.482649 | 1.3:+11572799 | None:intergenic |
| CAACACTCTCGTGTGATGTC+TGG | 0.483836 | 1.3:+11568456 | None:intergenic |
| TAAGAAAGTTTGGAATCAAT+CGG | 0.488653 | 1.3:-11571357 | MS.gene56039:CDS |
| GAAGAAACAAAGGTGAGTAA+TGG | 0.488751 | 1.3:-11572698 | MS.gene56039:CDS |
| ATTCAGTTATTGTCAATTGG+AGG | 0.490638 | 1.3:-11572961 | MS.gene56039:CDS |
| AATCAAAACAGTGTCTGGAT+TGG | 0.490995 | 1.3:+11566463 | None:intergenic |
| TTGAATTAGGTCCGTTGTGA+TGG | 0.491387 | 1.3:-11571218 | MS.gene56039:intron |
| AGCAGAAAATGGGTCATGTT+CGG | 0.491791 | 1.3:+11566319 | None:intergenic |
| TTTGGTCTTAAGAAATGCAA+TGG | 0.492544 | 1.3:-11572851 | MS.gene56039:CDS |
| AATATCGTGGTGAACAAGTA+AGG | 0.493471 | 1.3:-11564698 | MS.gene56039:CDS |
| ACCCCTCACTTTATGAGGAA+TGG | 0.494119 | 1.3:+11565766 | None:intergenic |
| CCCTTGATGCACACATGACA+TGG | 0.495004 | 1.3:+11567586 | None:intergenic |
| TAGTGACCCCTCACTTTATG+AGG | 0.495895 | 1.3:+11565761 | None:intergenic |
| TCTTGGCAATGAGGGCGATC+CGG | 0.496571 | 1.3:+11564119 | None:intergenic |
| CTGAAATGCCGAATCGCAAA+CGG | 0.497860 | 1.3:-11573270 | None:intergenic |
| TTTGTTACTGTGCTTATCAC+AGG | 0.500441 | 1.3:-11566679 | MS.gene56039:intron |
| GGGAAGGGGAAGAATGGAAC+TGG | 0.501539 | 1.3:-11572830 | MS.gene56039:CDS |
| AGTAAACCAGTAAAACTAAC+GGG | 0.501556 | 1.3:+11573157 | None:intergenic |
| CCATGTCATGTGTGCATCAA+GGG | 0.502016 | 1.3:-11567586 | MS.gene56039:CDS |
| GGCCGCGACGTCTGCAGGCG+CGG | 0.504844 | 1.3:-11572918 | MS.gene56039:CDS |
| TTAAACTTCACTTTGCAAGC+AGG | 0.506409 | 1.3:+11570999 | None:intergenic |
| AATTTACCTGTAAGTGATGA+AGG | 0.511596 | 1.3:+11565528 | None:intergenic |
| TCCATGTCATGTGTGCATCA+AGG | 0.512360 | 1.3:-11567587 | MS.gene56039:CDS |
| TCAATCGGATAGCGGAAGTT+GGG | 0.514197 | 1.3:-11571342 | MS.gene56039:intron |
| GCCAAGACTAACGTATCTGC+TGG | 0.516278 | 1.3:-11564103 | MS.gene56039:CDS |
| CATGATCTCAAAACCAGCTC+AGG | 0.518124 | 1.3:+11572548 | None:intergenic |
| GAAGGTAGTGCTTCCAAAGA+AGG | 0.518649 | 1.3:-11570718 | MS.gene56039:CDS |
| AATGGAACTGGAAATGGAAC+CGG | 0.519586 | 1.3:-11572818 | MS.gene56039:CDS |
| TGATTATACAAACCCCTCAT+GGG | 0.519872 | 1.3:-11566445 | MS.gene56039:CDS |
| TGTTCGAGACTTTACATCAT+GGG | 0.521144 | 1.3:-11568499 | MS.gene56039:CDS |
| AAAACAGGCACTTAGTGAAT+GGG | 0.521307 | 1.3:-11569872 | MS.gene56039:CDS |
| TCCTATGTAAAACATGTGCT+AGG | 0.521635 | 1.3:-11571545 | MS.gene56039:CDS |
| TCACTGGCAAAAGATACTTC+AGG | 0.522270 | 1.3:+11568076 | None:intergenic |
| ATGTTCGAGACTTTACATCA+TGG | 0.525400 | 1.3:-11568500 | MS.gene56039:CDS |
| TAAACTTCACTTTGCAAGCA+GGG | 0.525413 | 1.3:+11571000 | None:intergenic |
| TCGCAAACGGAGAAGATTAA+CGG | 0.525471 | 1.3:-11573257 | MS.gene56039:CDS |
| TCTTTGACATATTGAAAGGA+AGG | 0.526999 | 1.3:+11571598 | None:intergenic |
| TCCAAAATAAGAGAAAAGTT+GGG | 0.527543 | 1.3:-11566400 | MS.gene56039:CDS |
| ACAAAATTATCATCTGCGTC+AGG | 0.528000 | 1.3:-11569034 | MS.gene56039:intron |
| GTTATTTGTAAGCAAATCCA+TGG | 0.528323 | 1.3:-11567645 | MS.gene56039:CDS |
| ACCAGCAGATACGTTAGTCT+TGG | 0.528789 | 1.3:+11564102 | None:intergenic |
| CACTGCTTCAAACCAGAAGA+AGG | 0.529246 | 1.3:-11571982 | MS.gene56039:intron |
| GAAGATATAAATGCGGTGGC+TGG | 0.531528 | 1.3:-11572053 | MS.gene56039:CDS |
| CATTTGTGGAAAATGTAGAC+AGG | 0.532489 | 1.3:-11572296 | MS.gene56039:intron |
| TGCCACCGTTGCTGCGACTG+TGG | 0.536993 | 1.3:-11573131 | MS.gene56039:CDS |
| CACATTGTGTGCACGAGCCA+TGG | 0.538133 | 1.3:+11567628 | None:intergenic |
| TTGGTCTTAAGAAATGCAAT+GGG | 0.538925 | 1.3:-11572850 | MS.gene56039:CDS |
| AATCTCTGTATAGCATCTAA+AGG | 0.539325 | 1.3:+11565731 | None:intergenic |
| AAAACAAAGGATTTGACTCC+TGG | 0.540587 | 1.3:-11571576 | MS.gene56039:CDS |
| ATAGATGGAGCAAATACAAT+GGG | 0.541052 | 1.3:-11570740 | MS.gene56039:intron |
| ATGAACCTGTTTGTGCTAAG+TGG | 0.541212 | 1.3:-11569106 | MS.gene56039:CDS |
| AAGGTCACTGTTCTCTGCAA+TGG | 0.543043 | 1.3:-11570699 | MS.gene56039:CDS |
| ATACCGTGCCTCCCTTAGAT+CGG | 0.544876 | 1.3:+11564665 | None:intergenic |
| TAGATCAGGCATACATGGAT+GGG | 0.544975 | 1.3:-11565396 | MS.gene56039:CDS |
| TAAAGGATCCATGATATCGC+TGG | 0.545747 | 1.3:-11569800 | MS.gene56039:CDS |
| GCACGAAGAACTATTCAAGA+AGG | 0.549090 | 1.3:-11565365 | MS.gene56039:CDS |
| GTTCTCTGCAATGGTGTGGA+AGG | 0.550448 | 1.3:-11570690 | MS.gene56039:CDS |
| ATGGAACCGGCAGAGGGCGA+GGG | 0.554352 | 1.3:-11572805 | MS.gene56039:CDS |
| ACTTTGTGACGAATGTGGAT+TGG | 0.555796 | 1.3:-11571622 | MS.gene56039:CDS |
| GTAGATCAGGCATACATGGA+TGG | 0.557462 | 1.3:-11565397 | MS.gene56039:CDS |
| TTTGGTAGATCAGGCATACA+TGG | 0.557641 | 1.3:-11565401 | MS.gene56039:CDS |
| GTATAGCATCTAAAGGATGA+TGG | 0.559536 | 1.3:+11565738 | None:intergenic |
| GCGCAGCGTTGCCGATCTAA+GGG | 0.560666 | 1.3:-11564676 | MS.gene56039:CDS |
| GCTGTTCATCAAGAATGCTA+TGG | 0.562015 | 1.3:-11568531 | MS.gene56039:CDS |
| TTAAGAAATGCAATGGGAAG+GGG | 0.562330 | 1.3:-11572844 | MS.gene56039:CDS |
| AGGCACGGTATAAATTAGAA+AGG | 0.564077 | 1.3:-11564653 | MS.gene56039:CDS |
| TATGAGTCAAGCACCTGAGC+TGG | 0.566056 | 1.3:-11572561 | MS.gene56039:intron |
| TGGTAAACAGACAACAAGAA+TGG | 0.566851 | 1.3:-11566702 | MS.gene56039:CDS |
| GTGTGGGTCATGACGAGAGC+CGG | 0.567392 | 1.3:-11564138 | MS.gene56039:CDS |
| CACTGTTCTCTGCAATGGTG+TGG | 0.567969 | 1.3:-11570694 | MS.gene56039:CDS |
| AGGTGATATAGTTTGGGCTA+AGG | 0.571401 | 1.3:-11572627 | MS.gene56039:CDS |
| TTCAAATTCACGAAAGCTCG+TGG | 0.572074 | 1.3:+11572892 | None:intergenic |
| TCCATCAAATTCTTTCGTGA+AGG | 0.572136 | 1.3:-11568017 | MS.gene56039:intron |
| TTAAAAGGTACCTTGCAGAA+AGG | 0.575207 | 1.3:+11569227 | None:intergenic |
| CTTAAGAAATGCAATGGGAA+GGG | 0.578769 | 1.3:-11572845 | MS.gene56039:CDS |
| GTTGCTGCGACTGTGGCACC+GGG | 0.581010 | 1.3:-11573124 | MS.gene56039:CDS |
| GTCATGTGTGCATCAAGGGC+CGG | 0.582539 | 1.3:-11567582 | MS.gene56039:CDS |
| CGGTGCCACAGTCGCAGCAA+CGG | 0.582985 | 1.3:+11573126 | None:intergenic |
| CCTATGTAAAACATGTGCTA+GGG | 0.583003 | 1.3:-11571544 | MS.gene56039:intron |
| TCAATTTCAAGCGGCAGTTG+AGG | 0.585512 | 1.3:-11572117 | MS.gene56039:CDS |
| ACACATGACATGGAAATAAG+TGG | 0.586514 | 1.3:+11567596 | None:intergenic |
| ATTTCAAGCGGCAGTTGAGG+AGG | 0.587823 | 1.3:-11572114 | MS.gene56039:CDS |
| CAAGTGACATGAACCCATAA+CGG | 0.588776 | 1.3:+11568112 | None:intergenic |
| CTGGAAATGGAACCGGCAGA+GGG | 0.590089 | 1.3:-11572811 | MS.gene56039:CDS |
| AACCTGAAGACGGCCGCGCG+AGG | 0.593397 | 1.3:+11573003 | None:intergenic |
| CCGCGTAGCAGTAGCCGTCG+CGG | 0.593737 | 1.3:+11573042 | None:intergenic |
| ATACTTAAGATACCCAAAGC+AGG | 0.595509 | 1.3:+11568040 | None:intergenic |
| GTTCAAAATTAGTGAAGAGG+TGG | 0.595720 | 1.3:-11564438 | MS.gene56039:CDS |
| TTTCCGTTAAATCTTCTCAA+CGG | 0.597764 | 1.3:-11573187 | MS.gene56039:CDS |
| GCTGTTCAAAATTAGTGAAG+AGG | 0.597768 | 1.3:-11564441 | MS.gene56039:CDS |
| TACGTTAGTCTTGGCAATGA+GGG | 0.600926 | 1.3:+11564111 | None:intergenic |
| TTTGGAGCTTTACACAAACA+AGG | 0.602627 | 1.3:+11563677 | None:intergenic |
| TATAGATGGAGCAAATACAA+TGG | 0.602774 | 1.3:-11570741 | MS.gene56039:intron |
| ATCAAGGGCCGGTTATCGCA+TGG | 0.605924 | 1.3:-11567571 | MS.gene56039:CDS |
| CAATATGTCAAAGAAAACAA+AGG | 0.606472 | 1.3:-11571589 | MS.gene56039:CDS |
| AGCCGCGCCTGCAGACGTCG+CGG | 0.607626 | 1.3:+11572916 | None:intergenic |
| ACTTTGCATGGGTGAAGTAT+GGG | 0.607771 | 1.3:-11572329 | MS.gene56039:CDS |
| AGATCAGGCATACATGGATG+GGG | 0.613190 | 1.3:-11565395 | MS.gene56039:CDS |
| GTATGCCAAATTGCTATGCA+AGG | 0.614408 | 1.3:-11564168 | MS.gene56039:CDS |
| GGTTCGTTCTTACAAAGACT+CGG | 0.615496 | 1.3:+11566288 | None:intergenic |
| AGCCATTCCTCATAAAGTGA+GGG | 0.615616 | 1.3:-11565768 | MS.gene56039:CDS |
| TTACATAGGAGTTGACCACC+AGG | 0.615916 | 1.3:+11571558 | None:intergenic |
| TAGTTGAAATGACCCCATGA+GGG | 0.615961 | 1.3:+11566432 | None:intergenic |
| TTGGAGCTTTACACAAACAA+GGG | 0.615985 | 1.3:+11563678 | None:intergenic |
| AACAGAAGATATAAATGCGG+TGG | 0.617214 | 1.3:-11572057 | MS.gene56039:CDS |
| GATTATACAAACCCCTCATG+GGG | 0.619603 | 1.3:-11566444 | MS.gene56039:CDS |
| GTGGGACTTTGTGACGAATG+TGG | 0.621104 | 1.3:-11571627 | MS.gene56039:CDS |
| TCTTAAGAAATGCAATGGGA+AGG | 0.621780 | 1.3:-11572846 | MS.gene56039:CDS |
| TTAGTTGAAATGACCCCATG+AGG | 0.622535 | 1.3:+11566431 | None:intergenic |
| CCGCGCGAGGTTCTAACCAA+CGG | 0.623191 | 1.3:+11573016 | None:intergenic |
| TGTTCGGTGTTATCTTCTGG+AGG | 0.623285 | 1.3:+11566335 | None:intergenic |
| AGATACTTCAGGTCGAAACC+AGG | 0.625946 | 1.3:+11568087 | None:intergenic |
| AAATTGCTTACCTTTCTGCA+AGG | 0.627499 | 1.3:-11569237 | MS.gene56039:intron |
| ATACGTTAGTCTTGGCAATG+AGG | 0.628532 | 1.3:+11564110 | None:intergenic |
| ATGGAGCAAATACAATGGGA+AGG | 0.630473 | 1.3:-11570736 | MS.gene56039:CDS |
| AAGCCATTCCTCATAAAGTG+AGG | 0.633064 | 1.3:-11565769 | MS.gene56039:CDS |
| TATGCTTACAAGTGAAGACA+GGG | 0.639422 | 1.3:+11570657 | None:intergenic |
| AGTTGAAATGACCCCATGAG+GGG | 0.639618 | 1.3:+11566433 | None:intergenic |
| AGTGAATGGGAACGTCACAC+AGG | 0.639816 | 1.3:-11569859 | MS.gene56039:CDS |
| CATAACGGATCGATATCAGT+AGG | 0.639930 | 1.3:+11568127 | None:intergenic |
| GTCTTCAGGTTATGCCGTCG+CGG | 0.640114 | 1.3:-11572991 | MS.gene56039:CDS |
| ATATAGTTTGGGCTAAGGCG+AGG | 0.643295 | 1.3:-11572622 | MS.gene56039:CDS |
| GAGTAAACCAGTAAAACTAA+CGG | 0.645263 | 1.3:+11573156 | None:intergenic |
| GTTTGGAATCAATCGGATAG+CGG | 0.648105 | 1.3:-11571350 | MS.gene56039:CDS |
| TGCCACAGTCGCAGCAACGG+TGG | 0.649403 | 1.3:+11573129 | None:intergenic |
| ACAAAGGATTTGACTCCTGG+TGG | 0.651965 | 1.3:-11571573 | MS.gene56039:CDS |
| TTGCCGATCTAAGGGAGGCA+CGG | 0.652080 | 1.3:-11564668 | MS.gene56039:CDS |
| GTTGTGAACAGGACTTTGCA+TGG | 0.655298 | 1.3:-11572341 | MS.gene56039:intron |
| CAGCGTTGCCGATCTAAGGG+AGG | 0.655345 | 1.3:-11564673 | MS.gene56039:CDS |
| AAGCAGCTATTATCATTACC+CGG | 0.657214 | 1.3:+11573106 | None:intergenic |
| ACTGAATCATTAAACCGCGA+CGG | 0.657972 | 1.3:+11572977 | None:intergenic |
| GCGACGGCATAACCTGAAGA+CGG | 0.659013 | 1.3:+11572993 | None:intergenic |
| AGATATTATTAAAACCGCGA+CGG | 0.659423 | 1.3:-11573056 | MS.gene56039:CDS |
| GCCATTCCTCATAAAGTGAG+GGG | 0.662108 | 1.3:-11565767 | MS.gene56039:CDS |
| ACGATGTGCTGTATGTAGAT+GGG | 0.662827 | 1.3:-11569075 | MS.gene56039:CDS |
| GTTGTGATGGATGTAAAGTG+TGG | 0.663990 | 1.3:-11571205 | MS.gene56039:CDS |
| AGGGTATTCGGAATTGTGTG+AGG | 0.664127 | 1.3:-11572786 | MS.gene56039:CDS |
| ACTGCCGCTTGAAATTGAGA+CGG | 0.665950 | 1.3:+11572122 | None:intergenic |
| CGCGAGGTTCTAACCAACGG+CGG | 0.666470 | 1.3:+11573019 | None:intergenic |
| TTGTGAACAGGACTTTGCAT+GGG | 0.666991 | 1.3:-11572340 | MS.gene56039:intron |
| ATGCAGGTCCTTGAATATCG+TGG | 0.667657 | 1.3:-11564711 | MS.gene56039:intron |
| TGATCCGTCTCAATTTCAAG+CGG | 0.671730 | 1.3:-11572126 | MS.gene56039:CDS |
| GTATTCGGAATTGTGTGAGG+AGG | 0.677078 | 1.3:-11572783 | MS.gene56039:CDS |
| CTGATAAAGGAAATATTGCG+CGG | 0.678009 | 1.3:-11564403 | MS.gene56039:CDS |
| TTGTGATGGATGTAAAGTGT+GGG | 0.678425 | 1.3:-11571204 | MS.gene56039:CDS |
| ACGAAATCGAAACATTATTG+CGG | 0.687231 | 1.3:-11571386 | MS.gene56039:CDS |
| CCGTTGGTTAGAACCTCGCG+CGG | 0.691318 | 1.3:-11573016 | MS.gene56039:CDS |
| CTATGCAAGGATCATGAGTG+TGG | 0.696386 | 1.3:-11564155 | MS.gene56039:CDS |
| GTTAACAGAAGATATAAATG+CGG | 0.698123 | 1.3:-11572060 | MS.gene56039:CDS |
| CCGCGACGGCTACTGCTACG+CGG | 0.711168 | 1.3:-11573042 | MS.gene56039:CDS |
| ACACTTTACATCCATCACAA+CGG | 0.723460 | 1.3:+11571207 | None:intergenic |
| AAGGGCCGGTTATCGCATGG+AGG | 0.728834 | 1.3:-11567568 | MS.gene56039:intron |
| TATGCAAGGATCATGAGTGT+GGG | 0.735724 | 1.3:-11564154 | MS.gene56039:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 11563655 | 11573287 | 11563655 | ID=MS.gene56039 |
| chr1.3 | mRNA | 11563655 | 11573287 | 11563655 | ID=MS.gene56039.t1;Parent=MS.gene56039 |
| chr1.3 | exon | 11572562 | 11573287 | 11572562 | ID=MS.gene56039.t1.exon1;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11572562 | 11573287 | 11572562 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11572297 | 11572352 | 11572297 | ID=MS.gene56039.t1.exon2;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11572297 | 11572352 | 11572297 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11571983 | 11572178 | 11571983 | ID=MS.gene56039.t1.exon3;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11571983 | 11572178 | 11571983 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11571545 | 11571673 | 11571545 | ID=MS.gene56039.t1.exon4;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11571545 | 11571673 | 11571545 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11571343 | 11571411 | 11571343 | ID=MS.gene56039.t1.exon5;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11571343 | 11571411 | 11571343 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11571163 | 11571231 | 11571163 | ID=MS.gene56039.t1.exon6;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11571163 | 11571231 | 11571163 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11570957 | 11571048 | 11570957 | ID=MS.gene56039.t1.exon7;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11570957 | 11571048 | 11570957 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11570666 | 11570758 | 11570666 | ID=MS.gene56039.t1.exon8;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11570666 | 11570758 | 11570666 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11569792 | 11569927 | 11569792 | ID=MS.gene56039.t1.exon9;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11569792 | 11569927 | 11569792 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11569238 | 11569343 | 11569238 | ID=MS.gene56039.t1.exon10;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11569238 | 11569343 | 11569238 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11569035 | 11569134 | 11569035 | ID=MS.gene56039.t1.exon11;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11569035 | 11569134 | 11569035 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11568439 | 11568563 | 11568439 | ID=MS.gene56039.t1.exon12;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11568439 | 11568563 | 11568439 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11568018 | 11568163 | 11568018 | ID=MS.gene56039.t1.exon13;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11568018 | 11568163 | 11568018 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11567569 | 11567673 | 11567569 | ID=MS.gene56039.t1.exon14;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11567569 | 11567673 | 11567569 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11566680 | 11566744 | 11566680 | ID=MS.gene56039.t1.exon15;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11566680 | 11566744 | 11566680 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11566277 | 11566490 | 11566277 | ID=MS.gene56039.t1.exon16;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11566277 | 11566490 | 11566277 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11565718 | 11565804 | 11565718 | ID=MS.gene56039.t1.exon17;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11565718 | 11565804 | 11565718 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11565535 | 11565591 | 11565535 | ID=MS.gene56039.t1.exon18;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11565535 | 11565591 | 11565535 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11565358 | 11565447 | 11565358 | ID=MS.gene56039.t1.exon19;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11565358 | 11565447 | 11565358 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11564641 | 11564727 | 11564641 | ID=MS.gene56039.t1.exon20;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11564641 | 11564727 | 11564641 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11564388 | 11564462 | 11564388 | ID=MS.gene56039.t1.exon21;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11564388 | 11564462 | 11564388 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11564091 | 11564191 | 11564091 | ID=MS.gene56039.t1.exon22;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11564091 | 11564191 | 11564091 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| chr1.3 | exon | 11563655 | 11563745 | 11563655 | ID=MS.gene56039.t1.exon23;Parent=MS.gene56039.t1 |
| chr1.3 | CDS | 11563655 | 11563745 | 11563655 | ID=cds.MS.gene56039.t1;Parent=MS.gene56039.t1 |
| Gene Sequence |
| Protein sequence |
