Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58308.t1 | XP_013444907.1 | 94.3 | 667 | 31 | 1 | 1 | 667 | 1 | 660 | 0.00E+00 | 1116.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58308.t1 | Q8VZE7 | 61.6 | 571 | 218 | 1 | 81 | 650 | 97 | 667 | 4.7e-176 | 619.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58308.t1 | A0A072TNG2 | 94.3 | 667 | 31 | 1 | 1 | 667 | 1 | 660 | 0.0e+00 | 1116.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene58308 | 0.843021 | 1.81E-58 | -1.69E-46 |
| MS.gene049151 | MS.gene58308 | 0.819439 | 1.16E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene58308 | 0.847091 | 1.44E-59 | -1.69E-46 |
| MS.gene049378 | MS.gene58308 | 0.837451 | 5.16E-57 | -1.69E-46 |
| MS.gene049426 | MS.gene58308 | 0.812339 | 4.46E-51 | -1.69E-46 |
| MS.gene049758 | MS.gene58308 | 0.869411 | 3.16E-66 | -1.69E-46 |
| MS.gene049915 | MS.gene58308 | 0.818039 | 2.41E-52 | -1.69E-46 |
| MS.gene050226 | MS.gene58308 | 0.813877 | 2.05E-51 | -1.69E-46 |
| MS.gene050227 | MS.gene58308 | 0.824893 | 6.30E-54 | -1.69E-46 |
| MS.gene050228 | MS.gene58308 | 0.80747 | 4.98E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene58308 | 0.846601 | 1.96E-59 | -1.69E-46 |
| MS.gene050330 | MS.gene58308 | -0.811878 | 5.62E-51 | -1.69E-46 |
| MS.gene050558 | MS.gene58308 | 0.84462 | 6.75E-59 | -1.69E-46 |
| MS.gene050623 | MS.gene58308 | -0.803767 | 2.98E-49 | -1.69E-46 |
| MS.gene050642 | MS.gene58308 | 0.828223 | 1.01E-54 | -1.69E-46 |
| MS.gene050820 | MS.gene58308 | 0.839396 | 1.63E-57 | -1.69E-46 |
| MS.gene050953 | MS.gene58308 | 0.80122 | 9.98E-49 | -1.69E-46 |
| MS.gene05119 | MS.gene58308 | -0.831752 | 1.40E-55 | -1.69E-46 |
| MS.gene051582 | MS.gene58308 | 0.821163 | 4.67E-53 | -1.69E-46 |
| MS.gene051663 | MS.gene58308 | 0.838095 | 3.53E-57 | -1.69E-46 |
| MS.gene051860 | MS.gene58308 | 0.857523 | 1.54E-62 | -1.69E-46 |
| MS.gene051983 | MS.gene58308 | 0.845959 | 2.93E-59 | -1.69E-46 |
| MS.gene052011 | MS.gene58308 | -0.801682 | 8.02E-49 | -1.69E-46 |
| MS.gene052077 | MS.gene58308 | 0.833979 | 3.91E-56 | -1.69E-46 |
| MS.gene052176 | MS.gene58308 | 0.813212 | 2.87E-51 | -1.69E-46 |
| MS.gene052188 | MS.gene58308 | 0.8301 | 3.55E-55 | -1.69E-46 |
| MS.gene052253 | MS.gene58308 | 0.840561 | 8.08E-58 | -1.69E-46 |
| MS.gene052255 | MS.gene58308 | 0.823059 | 1.70E-53 | -1.69E-46 |
| MS.gene052340 | MS.gene58308 | 0.822846 | 1.90E-53 | -1.69E-46 |
| MS.gene052389 | MS.gene58308 | 0.811115 | 8.23E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene58308 | 0.888961 | 3.71E-73 | -1.69E-46 |
| MS.gene054183 | MS.gene58308 | 0.824797 | 6.64E-54 | -1.69E-46 |
| MS.gene054473 | MS.gene58308 | 0.815715 | 8.02E-52 | -1.69E-46 |
| MS.gene054667 | MS.gene58308 | 0.806265 | 8.94E-50 | -1.69E-46 |
| MS.gene054918 | MS.gene58308 | 0.815979 | 7.00E-52 | -1.69E-46 |
| MS.gene054930 | MS.gene58308 | 0.87996 | 8.13E-70 | -1.69E-46 |
| MS.gene054942 | MS.gene58308 | 0.818165 | 2.26E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene58308 | 0.827137 | 1.85E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene58308 | 0.833296 | 5.79E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene58308 | 0.807316 | 5.36E-50 | -1.69E-46 |
| MS.gene055390 | MS.gene58308 | 0.801326 | 9.49E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene58308 | 0.846113 | 2.66E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene58308 | 0.837882 | 4.00E-57 | -1.69E-46 |
| MS.gene05553 | MS.gene58308 | 0.819845 | 9.38E-53 | -1.69E-46 |
| MS.gene055564 | MS.gene58308 | 0.811596 | 6.47E-51 | -1.69E-46 |
| MS.gene055604 | MS.gene58308 | 0.835005 | 2.16E-56 | -1.69E-46 |
| MS.gene055712 | MS.gene58308 | 0.820659 | 6.10E-53 | -1.69E-46 |
| MS.gene055859 | MS.gene58308 | 0.807539 | 4.81E-50 | -1.69E-46 |
| MS.gene056612 | MS.gene58308 | 0.825238 | 5.23E-54 | -1.69E-46 |
| MS.gene056659 | MS.gene58308 | 0.80814 | 3.59E-50 | -1.69E-46 |
| MS.gene056723 | MS.gene58308 | 0.858555 | 7.60E-63 | -1.69E-46 |
| MS.gene056979 | MS.gene58308 | 0.836711 | 7.97E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene58308 | 0.822635 | 2.13E-53 | -1.69E-46 |
| MS.gene057121 | MS.gene58308 | 0.867127 | 1.72E-65 | -1.69E-46 |
| MS.gene057245 | MS.gene58308 | 0.822318 | 2.53E-53 | -1.69E-46 |
| MS.gene057448 | MS.gene58308 | 0.823073 | 1.69E-53 | -1.69E-46 |
| MS.gene057449 | MS.gene58308 | 0.813242 | 2.83E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene58308 | 0.816495 | 5.37E-52 | -1.69E-46 |
| MS.gene057469 | MS.gene58308 | 0.814219 | 1.72E-51 | -1.69E-46 |
| MS.gene057750 | MS.gene58308 | 0.806625 | 7.51E-50 | -1.69E-46 |
| MS.gene057754 | MS.gene58308 | 0.800315 | 1.53E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene58308 | 0.875164 | 3.82E-68 | -1.69E-46 |
| MS.gene05811 | MS.gene58308 | 0.830159 | 3.44E-55 | -1.69E-46 |
| MS.gene058142 | MS.gene58308 | 0.8646 | 1.08E-64 | -1.69E-46 |
| MS.gene058660 | MS.gene58308 | 0.800176 | 1.63E-48 | -1.69E-46 |
| MS.gene058710 | MS.gene58308 | 0.851488 | 8.59E-61 | -1.69E-46 |
| MS.gene058749 | MS.gene58308 | 0.838193 | 3.33E-57 | -1.69E-46 |
| MS.gene058833 | MS.gene58308 | 0.803562 | 3.29E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene58308 | 0.812097 | 5.03E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene58308 | 0.851489 | 8.59E-61 | -1.69E-46 |
| MS.gene058949 | MS.gene58308 | 0.830833 | 2.35E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene58308 | 0.8328 | 7.69E-56 | -1.69E-46 |
| MS.gene059247 | MS.gene58308 | 0.837797 | 4.20E-57 | -1.69E-46 |
| MS.gene059285 | MS.gene58308 | 0.835753 | 1.40E-56 | -1.69E-46 |
| MS.gene059420 | MS.gene58308 | 0.825075 | 5.71E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene58308 | 0.803253 | 3.81E-49 | -1.69E-46 |
| MS.gene05984 | MS.gene58308 | 0.860517 | 1.95E-63 | -1.69E-46 |
| MS.gene059894 | MS.gene58308 | 0.808621 | 2.83E-50 | -1.69E-46 |
| MS.gene059899 | MS.gene58308 | 0.847437 | 1.16E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene58308 | 0.84629 | 2.38E-59 | -1.69E-46 |
| MS.gene061114 | MS.gene58308 | -0.821351 | 4.23E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58308.t1 | MTR_8g432340 | 94.303 | 667 | 31 | 1 | 1 | 667 | 1 | 660 | 0.0 | 1255 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58308.t1 | AT2G31890 | 66.961 | 566 | 186 | 1 | 86 | 650 | 102 | 667 | 0.0 | 729 |
Find 147 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACTTTACTTACTTTAAAT+AGG | 0.178036 | 8.2:-65564552 | MS.gene58308:CDS |
| CGCCAAGTTCTCGTGGTAAC+TGG | 0.239282 | 8.2:+65565834 | None:intergenic |
| ATAGAAGATTTACTTGATTA+TGG | 0.247712 | 8.2:-65565405 | MS.gene58308:CDS |
| GGAAGGGTTATTGAATTCTT+TGG | 0.291031 | 8.2:-65565913 | MS.gene58308:CDS |
| GCTTGGTCCTATGCTGTCTT+TGG | 0.292707 | 8.2:-65564511 | MS.gene58308:CDS |
| AACTTTACTTACTTTAAATA+GGG | 0.303023 | 8.2:-65564551 | MS.gene58308:CDS |
| ACCGATTTGTTCATTATTGT+TGG | 0.305910 | 8.2:+65564603 | None:intergenic |
| AGATATCATGTTTGCTTCTC+AGG | 0.310999 | 8.2:-65564404 | MS.gene58308:CDS |
| CTTCTCAAATCACTTTCCTT+TGG | 0.312687 | 8.2:+65565354 | None:intergenic |
| GGCTTATGCGATGGAAGATT+TGG | 0.313416 | 8.2:-65565511 | MS.gene58308:CDS |
| TCATCGCATTGCTAAGAATA+TGG | 0.316718 | 8.2:-65565085 | MS.gene58308:CDS |
| AAACCCTTTGCTCCTCAAAA+TGG | 0.319665 | 8.2:+65564443 | None:intergenic |
| CAAAACATTGCTAACATTGC+AGG | 0.324391 | 8.2:-65564841 | MS.gene58308:CDS |
| ATCAGAGTTTGTCGGGGAAT+TGG | 0.338938 | 8.2:-65565667 | MS.gene58308:CDS |
| TATGGTTCAGAGGAAGAGTT+TGG | 0.340010 | 8.2:-65565387 | MS.gene58308:CDS |
| GTCAAAGAATATGTTGTAGA+TGG | 0.342480 | 8.2:-65564205 | MS.gene58308:CDS |
| GAAGTTTCTTCTCTTATGTA+TGG | 0.347428 | 8.2:-65564477 | MS.gene58308:CDS |
| ATTCCTTGAGCTGAGCATTC+AGG | 0.352455 | 8.2:+65564973 | None:intergenic |
| AAGAAGTCCGCCTCCAACTT+TGG | 0.355330 | 8.2:+65564927 | None:intergenic |
| AATAGACTGTCTCAATTCTC+TGG | 0.368929 | 8.2:-65565264 | MS.gene58308:CDS |
| TTGTATCTGTTGATCGAAAC+GGG | 0.370584 | 8.2:-65564579 | MS.gene58308:CDS |
| TTGTTAGCACTGGACTTGAA+TGG | 0.376921 | 8.2:-65564228 | MS.gene58308:CDS |
| CACCTACGAAACCTTTCAAT+TGG | 0.394489 | 8.2:+65564635 | None:intergenic |
| ACACATTTCTCTAGAAATAC+TGG | 0.398436 | 8.2:-65564124 | MS.gene58308:intron |
| TAACGGAGAGGAGTCTGATA+TGG | 0.415258 | 8.2:-65565697 | MS.gene58308:CDS |
| TTGAGAGCTGACCTCTTGAT+AGG | 0.415647 | 8.2:+65563658 | None:intergenic |
| CTATGCTGTCTTTGGACAAA+TGG | 0.416506 | 8.2:-65564503 | MS.gene58308:CDS |
| ACAATTGTCGCGGTTGCAAA+AGG | 0.421350 | 8.2:-65565153 | MS.gene58308:CDS |
| CAAAGGGTTTAAAACAACTT+TGG | 0.423201 | 8.2:+65565886 | None:intergenic |
| AGGAGATAGATTGGCTGCAT+TGG | 0.425081 | 8.2:-65565730 | MS.gene58308:CDS |
| GTTACCGAGCTCCGAAGAAA+AGG | 0.425877 | 8.2:-65565635 | MS.gene58308:CDS |
| AGTCGATAAGAAGCTTGCTT+TGG | 0.428233 | 8.2:-65564161 | MS.gene58308:CDS |
| AACTTCGTCGTTTCAGAAAG+AGG | 0.432282 | 8.2:-65564263 | MS.gene58308:CDS |
| GAAATAATTCACACTTTCAA+AGG | 0.434691 | 8.2:-65564754 | MS.gene58308:CDS |
| GGTCATCTTCTTGTTAGCAC+TGG | 0.437852 | 8.2:-65564238 | MS.gene58308:CDS |
| GACAGTTCAGCGAAAAGATC+GGG | 0.438484 | 8.2:+65564790 | None:intergenic |
| CTGCAGTGGGAGGAACTTCA+AGG | 0.440694 | 8.2:-65563232 | MS.gene58308:intron |
| ATTGGGAATCAGAGTTTGTC+GGG | 0.442092 | 8.2:-65565674 | MS.gene58308:CDS |
| CGACAGTTCAGCGAAAAGAT+CGG | 0.442547 | 8.2:+65564789 | None:intergenic |
| GTCGGGGAATTGGATCCGTT+TGG | 0.444529 | 8.2:-65565657 | MS.gene58308:CDS |
| GAGAGGAGTCTGATATGGAT+TGG | 0.456624 | 8.2:-65565692 | MS.gene58308:CDS |
| AAGGAATCTCAAACATAGCT+TGG | 0.457912 | 8.2:-65564957 | MS.gene58308:CDS |
| AAAGAGATGTCTATGCTTGT+CGG | 0.459089 | 8.2:-65565015 | MS.gene58308:CDS |
| TCCCAGTTACCACGAGAACT+TGG | 0.459982 | 8.2:-65565836 | MS.gene58308:CDS |
| TGAAATGTTTGCAGAAAATA+CGG | 0.460460 | 8.2:-65565310 | MS.gene58308:CDS |
| GAAATTCAAGTTTCAAGCAC+TGG | 0.460673 | 8.2:+65564368 | None:intergenic |
| TTTCGCTGAACTGTCGAAAA+GGG | 0.463715 | 8.2:-65564782 | MS.gene58308:CDS |
| GGGAAATTATAACTAACTCT+TGG | 0.464356 | 8.2:+65565855 | None:intergenic |
| TGTTAGCACTGGACTTGAAT+GGG | 0.465246 | 8.2:-65564227 | MS.gene58308:CDS |
| AAATCACTTTCCTTTGGCTG+TGG | 0.472714 | 8.2:+65565360 | None:intergenic |
| GTTTCAAGCACTGGTTTACA+AGG | 0.474725 | 8.2:+65564377 | None:intergenic |
| CTGAACAGGTGGAGTACCTA+AGG | 0.484246 | 8.2:-65563204 | MS.gene58308:CDS |
| CTTTAAATAGGGATCAGCTT+GGG | 0.484370 | 8.2:-65564540 | MS.gene58308:CDS |
| AGAGGAGTCTGATATGGATT+GGG | 0.487748 | 8.2:-65565691 | MS.gene58308:CDS |
| AAAGGGTTTCAGAGCTGTAT+CGG | 0.491181 | 8.2:-65564429 | MS.gene58308:CDS |
| TCCAACAATAATGAACAAAT+CGG | 0.492543 | 8.2:-65564604 | MS.gene58308:CDS |
| ACTTCAAGGAGGGTCTGAAC+AGG | 0.493250 | 8.2:-65563218 | MS.gene58308:CDS |
| GTCTCTATGCGGTGAGCTTG+AGG | 0.498153 | 8.2:-65564332 | MS.gene58308:CDS |
| GCTTAAACGTCGATACATTA+CGG | 0.499114 | 8.2:-65563708 | MS.gene58308:CDS |
| AAAGAAGGTTGAGGAGAAGG+TGG | 0.499984 | 8.2:-65565463 | MS.gene58308:CDS |
| AGGAATCTCAAACATAGCTT+GGG | 0.501827 | 8.2:-65564956 | MS.gene58308:CDS |
| TTGCAGAAAATACGGAGAAA+AGG | 0.502813 | 8.2:-65565302 | MS.gene58308:CDS |
| TATGATGAAAACTCGAAGAC+TGG | 0.509881 | 8.2:-65565052 | MS.gene58308:CDS |
| GAAGATCATTGCCAATTGAA+AGG | 0.514433 | 8.2:-65564646 | MS.gene58308:CDS |
| AAATAATTCACACTTTCAAA+GGG | 0.517159 | 8.2:-65564753 | MS.gene58308:CDS |
| TGGGCGCTGTCCAAAGTTGG+AGG | 0.519688 | 8.2:-65564937 | MS.gene58308:CDS |
| AGATTGCACTGACTAAAGTC+GGG | 0.519987 | 8.2:-65564876 | MS.gene58308:CDS |
| GAGATTGCACTGACTAAAGT+CGG | 0.521548 | 8.2:-65564877 | MS.gene58308:CDS |
| GCCAAGTTCTCGTGGTAACT+GGG | 0.523815 | 8.2:+65565835 | None:intergenic |
| TTAAGCATGGTATGTCCTAA+AGG | 0.524947 | 8.2:+65563725 | None:intergenic |
| GCTTGGGCGCTGTCCAAAGT+TGG | 0.525349 | 8.2:-65564940 | MS.gene58308:CDS |
| TTGGTGTGTGAGGGCGAGAG+AGG | 0.528486 | 8.2:-65565565 | MS.gene58308:CDS |
| ATCAGCTTGGGACTATAGCT+TGG | 0.529050 | 8.2:-65564528 | MS.gene58308:CDS |
| CGTCGATACATTACGGCTGC+CGG | 0.529125 | 8.2:-65563701 | MS.gene58308:CDS |
| TTCGGAGCTCGGTAACCAAA+CGG | 0.529938 | 8.2:+65565642 | None:intergenic |
| GTTGTATCTGTTGATCGAAA+CGG | 0.531354 | 8.2:-65564580 | MS.gene58308:CDS |
| CAACGATACGAGTTTCCAAC+CGG | 0.531834 | 8.2:+65563682 | None:intergenic |
| GATAGTAAAGCCGGTGCTAG+AGG | 0.534515 | 8.2:-65565750 | MS.gene58308:CDS |
| AAGGGTTTCAGAGCTGTATC+GGG | 0.534817 | 8.2:-65564428 | MS.gene58308:CDS |
| GAGGATAAAGTTTCCAGCGC+TGG | 0.535251 | 8.2:-65564313 | MS.gene58308:CDS |
| GAATCAAATACAGTGTCAGC+AGG | 0.536610 | 8.2:+65564685 | None:intergenic |
| ACTCTTGGAGTGAAACCAAA+GGG | 0.537314 | 8.2:+65565870 | None:intergenic |
| CGGTGCTAGAGGAGATAGAT+TGG | 0.539783 | 8.2:-65565739 | MS.gene58308:CDS |
| GTTTGGACTGCCACAGCCAA+AGG | 0.542148 | 8.2:-65565370 | MS.gene58308:CDS |
| GATTGGGAATCAGAGTTTGT+CGG | 0.543250 | 8.2:-65565675 | MS.gene58308:CDS |
| GAGCGGTAGCAATATTCAAA+GGG | 0.543772 | 8.2:+65565109 | None:intergenic |
| AATCGATTAAAGCGAAGGGT+AGG | 0.547508 | 8.2:-65565533 | MS.gene58308:CDS |
| ATAGACTGTCTCAATTCTCT+GGG | 0.548337 | 8.2:-65565263 | MS.gene58308:CDS |
| TCGTCGTTTCAGAAAGAGGT+TGG | 0.549276 | 8.2:-65564259 | MS.gene58308:CDS |
| TTCAAAGGGGAGAGAGGTGA+GGG | 0.552828 | 8.2:+65565123 | None:intergenic |
| TTGCCTGAATGCTCAGCTCA+AGG | 0.556576 | 8.2:-65564976 | MS.gene58308:CDS |
| CAATCTATCTCCTCTAGCAC+CGG | 0.560589 | 8.2:+65565740 | None:intergenic |
| TTACCGAGCTCCGAAGAAAA+GGG | 0.560642 | 8.2:-65565634 | MS.gene58308:CDS |
| TCAAAGAATATGTTGTAGAT+GGG | 0.560728 | 8.2:-65564204 | MS.gene58308:CDS |
| GCTTGAGGATACCGATGGAA+TGG | 0.566585 | 8.2:-65565589 | MS.gene58308:CDS |
| TTTGATAGAGATAGTAAAGC+CGG | 0.570770 | 8.2:-65565759 | MS.gene58308:CDS |
| TTGAGCTGAGCATTCAGGCA+AGG | 0.571147 | 8.2:+65564978 | None:intergenic |
| ATTTAAACGCCAAGTTCTCG+TGG | 0.571729 | 8.2:+65565827 | None:intergenic |
| GGATAATTGAAAAGTATGGA+AGG | 0.572370 | 8.2:-65565930 | None:intergenic |
| ATCGATTAAAGCGAAGGGTA+GGG | 0.575049 | 8.2:-65565532 | MS.gene58308:CDS |
| TTTACTTGATTATGGTTCAG+AGG | 0.575949 | 8.2:-65565397 | MS.gene58308:CDS |
| ACTTTAAATAGGGATCAGCT+TGG | 0.576268 | 8.2:-65564541 | MS.gene58308:CDS |
| GATAGATTGGCTGCATTGGA+TGG | 0.577186 | 8.2:-65565726 | MS.gene58308:CDS |
| AGAGCGGTAGCAATATTCAA+AGG | 0.578905 | 8.2:+65565108 | None:intergenic |
| GCGCTGTCCAAAGTTGGAGG+CGG | 0.580754 | 8.2:-65564934 | MS.gene58308:CDS |
| CAAAGGAAAGTGATTTGAGA+AGG | 0.581889 | 8.2:-65565353 | MS.gene58308:CDS |
| GATACATTACGGCTGCCGGT+TGG | 0.588016 | 8.2:-65563697 | MS.gene58308:CDS |
| ATTGAAATCGATTAAAGCGA+AGG | 0.591251 | 8.2:-65565538 | MS.gene58308:CDS |
| TCAAGGAGGGTCTGAACAGG+TGG | 0.593274 | 8.2:-65563215 | MS.gene58308:CDS |
| GCAATATTCAAAGGGGAGAG+AGG | 0.593759 | 8.2:+65565117 | None:intergenic |
| AAGCTTGCTTTGGAGATCGA+TGG | 0.599041 | 8.2:-65564151 | MS.gene58308:CDS |
| TGTTGTAGATGGGTACACTT+TGG | 0.603253 | 8.2:-65564194 | MS.gene58308:CDS |
| CGTATCGTTGTCCTATCAAG+AGG | 0.604008 | 8.2:-65563669 | MS.gene58308:intron |
| GATAATTGAAAAGTATGGAA+GGG | 0.604646 | 8.2:-65565929 | None:intergenic |
| AGAAAATACGGAGAAAAGGA+TGG | 0.607622 | 8.2:-65565298 | MS.gene58308:CDS |
| CATAGAGACAACTGAAGATG+TGG | 0.609122 | 8.2:+65564346 | None:intergenic |
| AACTCTTGGAGTGAAACCAA+AGG | 0.610647 | 8.2:+65565869 | None:intergenic |
| GAAGGGTAGGGCTTATGCGA+TGG | 0.611487 | 8.2:-65565520 | MS.gene58308:CDS |
| ATTCAAAGGGGAGAGAGGTG+AGG | 0.612983 | 8.2:+65565122 | None:intergenic |
| GCAAAAGTCGAAGTTGCTTG+AGG | 0.618329 | 8.2:-65565604 | MS.gene58308:CDS |
| GCATTGGATGGTGATGATAA+CGG | 0.618404 | 8.2:-65565714 | MS.gene58308:CDS |
| TGCCAATTGAAAGGTTTCGT+AGG | 0.619703 | 8.2:-65564637 | MS.gene58308:CDS |
| GCAGACTGCAGATGATGTGT+TGG | 0.621746 | 8.2:-65565190 | MS.gene58308:CDS |
| TCAAGCACTGGTTTACAAGG+TGG | 0.624683 | 8.2:+65564380 | None:intergenic |
| AGGATACCGATGGAATGGAT+TGG | 0.626596 | 8.2:-65565584 | MS.gene58308:CDS |
| CACACACCAATCCATTCCAT+CGG | 0.628347 | 8.2:+65565578 | None:intergenic |
| TTGAAATCGATTAAAGCGAA+GGG | 0.635470 | 8.2:-65565537 | MS.gene58308:CDS |
| ATGGAATGGATTGGTGTGTG+AGG | 0.635612 | 8.2:-65565575 | MS.gene58308:CDS |
| TGGAATGGATTGGTGTGTGA+GGG | 0.643530 | 8.2:-65565574 | MS.gene58308:CDS |
| GTGTGTGAGGGCGAGAGAGG+TGG | 0.645809 | 8.2:-65565562 | MS.gene58308:CDS |
| CTTAGCAATGCGATGAAGAG+CGG | 0.648223 | 8.2:+65565092 | None:intergenic |
| TGAACAGGTGGAGTACCTAA+GGG | 0.653442 | 8.2:-65563203 | MS.gene58308:CDS |
| AATGTATCGACGTTTAAGCA+TGG | 0.653806 | 8.2:+65563712 | None:intergenic |
| TACATACGAAACAATTGTCG+CGG | 0.653812 | 8.2:-65565163 | MS.gene58308:CDS |
| AGTGGGAGGAACTTCAAGGA+GGG | 0.659979 | 8.2:-65563228 | MS.gene58308:CDS |
| GTATTTCTAGAGAAATGTGT+AGG | 0.665375 | 8.2:+65564127 | None:intergenic |
| AAGTTGCTTGAGGATACCGA+TGG | 0.678693 | 8.2:-65565594 | MS.gene58308:CDS |
| TTGGGAATCAGAGTTTGTCG+GGG | 0.682626 | 8.2:-65565673 | MS.gene58308:CDS |
| GATTGCACTGACTAAAGTCG+GGG | 0.684216 | 8.2:-65564875 | MS.gene58308:CDS |
| AAGGCAAGTGAGTTTGATTG+CGG | 0.684765 | 8.2:-65565334 | MS.gene58308:CDS |
| CATCTTCAGTTGTCTCTATG+CGG | 0.688711 | 8.2:-65564343 | MS.gene58308:CDS |
| CAGTGGGAGGAACTTCAAGG+AGG | 0.704463 | 8.2:-65563229 | MS.gene58308:CDS |
| CATTTGTCCAAAGACAGCAT+AGG | 0.705791 | 8.2:+65564504 | None:intergenic |
| GGATGGTGATGATAACGGAG+AGG | 0.710792 | 8.2:-65565709 | MS.gene58308:CDS |
| TGATAACACTACATTGACAG+AGG | 0.716733 | 8.2:-65563149 | MS.gene58308:CDS |
| AGCGGTAGCAATATTCAAAG+GGG | 0.720526 | 8.2:+65565110 | None:intergenic |
| TGTATCTGTTGATCGAAACG+GGG | 0.729772 | 8.2:-65564578 | MS.gene58308:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTTTACTTACTTTAAATA+GGG | - | chr8.2:65564505-65564524 | MS.gene58308:CDS | 15.0% |
| !! | ACAAAAATATGAATAATAAC+AGG | + | chr8.2:65565632-65565651 | None:intergenic | 15.0% |
| !!! | ATTTTAATGAAAAAAATGAC+AGG | + | chr8.2:65565464-65565483 | None:intergenic | 15.0% |
| !!! | TTTTAATGAAAAAAATGACA+GGG | + | chr8.2:65565463-65565482 | None:intergenic | 15.0% |
| !! | AAATAATTCACACTTTCAAA+GGG | - | chr8.2:65564303-65564322 | MS.gene58308:CDS | 20.0% |
| !! | AATTGATACAAGAGAAAATA+AGG | + | chr8.2:65565246-65565265 | None:intergenic | 20.0% |
| !! | ACACATAAAATCAATATATG+TGG | + | chr8.2:65565523-65565542 | None:intergenic | 20.0% |
| !! | ATAGAAGATTTACTTGATTA+TGG | - | chr8.2:65563651-65563670 | MS.gene58308:intron | 20.0% |
| !! | CAACTTTACTTACTTTAAAT+AGG | - | chr8.2:65564504-65564523 | MS.gene58308:CDS | 20.0% |
| !!! | AACTATTTCTAGTACTTTAT+AGG | - | chr8.2:65565748-65565767 | MS.gene58308:CDS | 20.0% |
| !!! | ATAAAGTACTAGAAATAGTT+TGG | + | chr8.2:65565748-65565767 | None:intergenic | 20.0% |
| !!! | ATAAAGTCATTGTTTTCATA+TGG | + | chr8.2:65565149-65565168 | None:intergenic | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAA+AGG | - | chr8.2:65565210-65565229 | MS.gene58308:CDS | 20.0% |
| !!! | TAAAGTCATTGTTTTCATAT+GGG | + | chr8.2:65565148-65565167 | None:intergenic | 20.0% |
| !!! | TATTGATTTTATGTGTGTTT+TGG | - | chr8.2:65565527-65565546 | MS.gene58308:CDS | 20.0% |
| !!! | TTAAGTTGTTTATCCAAAAA+GGG | - | chr8.2:65565211-65565230 | MS.gene58308:CDS | 20.0% |
| ! | GAAATAATTCACACTTTCAA+AGG | - | chr8.2:65564302-65564321 | MS.gene58308:CDS | 25.0% |
| ! | GAAGAAGAAAAAGAAAAAGA+AGG | - | chr8.2:65563578-65563597 | MS.gene58308:intron | 25.0% |
| ! | GTAATATAAGATCAACTTCA+TGG | + | chr8.2:65565495-65565514 | None:intergenic | 25.0% |
| ! | TCAAAGAATATGTTGTAGAT+GGG | - | chr8.2:65564852-65564871 | MS.gene58308:CDS | 25.0% |
| ! | TCCAACAATAATGAACAAAT+CGG | - | chr8.2:65564452-65564471 | MS.gene58308:CDS | 25.0% |
| ! | TGAAATGTTTGCAGAAAATA+CGG | - | chr8.2:65563746-65563765 | MS.gene58308:intron | 25.0% |
| ! | TTAACTAAGTAAAATCACTC+AGG | - | chr8.2:65565272-65565291 | MS.gene58308:CDS | 25.0% |
| !! | ATTGTCTTTTCCTTTTATAC+AGG | - | chr8.2:65565304-65565323 | MS.gene58308:CDS | 25.0% |
| !!! | AACATTCACAATTTTTTCTG+TGG | + | chr8.2:65565787-65565806 | None:intergenic | 25.0% |
| !!! | ACTTCTTTACTTTTCAGAAA+TGG | - | chr8.2:65564145-65564164 | MS.gene58308:CDS | 25.0% |
| !!! | TCAAGTTGATTTCTTTTCTA+TGG | + | chr8.2:65563827-65563846 | None:intergenic | 25.0% |
| !!! | TTTTAAAGCAGTGGATAAAA+GGG | - | chr8.2:65565705-65565724 | MS.gene58308:CDS | 25.0% |
| !!! | TTTTTAAAGCAGTGGATAAA+AGG | - | chr8.2:65565704-65565723 | MS.gene58308:CDS | 25.0% |
| AAAATCAATATATGTGGCAG+TGG | + | chr8.2:65565517-65565536 | None:intergenic | 30.0% | |
| AAATAAGCAGCATGCATAAA+CGG | + | chr8.2:65565687-65565706 | None:intergenic | 30.0% | |
| ATTGAAATCGATTAAAGCGA+AGG | - | chr8.2:65563518-65563537 | MS.gene58308:intron | 30.0% | |
| CTCAAAAATTCAATCCAAAC+AGG | + | chr8.2:65564993-65565012 | None:intergenic | 30.0% | |
| GAAAAAGAAAAAGAAGGTTG+AGG | - | chr8.2:65563584-65563603 | MS.gene58308:intron | 30.0% | |
| GAAGTTTCTTCTCTTATGTA+TGG | - | chr8.2:65564579-65564598 | MS.gene58308:CDS | 30.0% | |
| GGGAAATTATAACTAACTCT+TGG | + | chr8.2:65563204-65563223 | None:intergenic | 30.0% | |
| GTCAAAGAATATGTTGTAGA+TGG | - | chr8.2:65564851-65564870 | MS.gene58308:CDS | 30.0% | |
| TAATAACAGGTGAAAAATCG+AGG | + | chr8.2:65565619-65565638 | None:intergenic | 30.0% | |
| TTGAAATCGATTAAAGCGAA+GGG | - | chr8.2:65563519-65563538 | MS.gene58308:intron | 30.0% | |
| TTTACTTGATTATGGTTCAG+AGG | - | chr8.2:65563659-65563678 | MS.gene58308:intron | 30.0% | |
| TTTGATAGAGATAGTAAAGC+CGG | - | chr8.2:65563297-65563316 | MS.gene58308:intron | 30.0% | |
| ! | ACACATTTCTCTAGAAATAC+TGG | - | chr8.2:65564932-65564951 | MS.gene58308:CDS | 30.0% |
| ! | CAAAGGGTTTAAAACAACTT+TGG | + | chr8.2:65563173-65563192 | None:intergenic | 30.0% |
| ! | TACTATTTGAGACAACTCAT+CGG | - | chr8.2:65565040-65565059 | MS.gene58308:CDS | 30.0% |
| ! | TATTGAATTTAGAGCCTGTT+TGG | - | chr8.2:65564976-65564995 | MS.gene58308:CDS | 30.0% |
| !! | ACCGATTTGTTCATTATTGT+TGG | + | chr8.2:65564456-65564475 | None:intergenic | 30.0% |
| !! | GTATTTCTAGAGAAATGTGT+AGG | + | chr8.2:65564932-65564951 | None:intergenic | 30.0% |
| !!! | CAAAGTTGTTTTAAACCCTT+TGG | - | chr8.2:65563171-65563190 | MS.gene58308:CDS | 30.0% |
| !!! | CTTATTTTTATGAGCTCTTC+AGG | - | chr8.2:65565098-65565117 | MS.gene58308:CDS | 30.0% |
| AAAGAGATGTCTATGCTTGT+CGG | - | chr8.2:65564041-65564060 | MS.gene58308:intron | 35.0% | |
| AAGGAATCTCAAACATAGCT+TGG | - | chr8.2:65564099-65564118 | MS.gene58308:intron | 35.0% | |
| AATAGACTGTCTCAATTCTC+TGG | - | chr8.2:65563792-65563811 | MS.gene58308:intron | 35.0% | |
| ACTTTAAATAGGGATCAGCT+TGG | - | chr8.2:65564515-65564534 | MS.gene58308:CDS | 35.0% | |
| AGAAAATACGGAGAAAAGGA+TGG | - | chr8.2:65563758-65563777 | MS.gene58308:intron | 35.0% | |
| AGATATCATGTTTGCTTCTC+AGG | - | chr8.2:65564652-65564671 | MS.gene58308:CDS | 35.0% | |
| AGGAATCTCAAACATAGCTT+GGG | - | chr8.2:65564100-65564119 | MS.gene58308:intron | 35.0% | |
| ATAGACTGTCTCAATTCTCT+GGG | - | chr8.2:65563793-65563812 | MS.gene58308:intron | 35.0% | |
| CAAAACATTGCTAACATTGC+AGG | - | chr8.2:65564215-65564234 | MS.gene58308:CDS | 35.0% | |
| CAAAGGAAAGTGATTTGAGA+AGG | - | chr8.2:65563703-65563722 | MS.gene58308:CDS | 35.0% | |
| CTTCTCAAATCACTTTCCTT+TGG | + | chr8.2:65563705-65563724 | None:intergenic | 35.0% | |
| CTTTAAATAGGGATCAGCTT+GGG | - | chr8.2:65564516-65564535 | MS.gene58308:CDS | 35.0% | |
| GAAGATCATTGCCAATTGAA+AGG | - | chr8.2:65564410-65564429 | MS.gene58308:CDS | 35.0% | |
| GCTTAAACGTCGATACATTA+CGG | - | chr8.2:65565348-65565367 | MS.gene58308:CDS | 35.0% | |
| GGAAGGGTTATTGAATTCTT+TGG | - | chr8.2:65563143-65563162 | MS.gene58308:CDS | 35.0% | |
| GTTGTATCTGTTGATCGAAA+CGG | - | chr8.2:65564476-65564495 | MS.gene58308:CDS | 35.0% | |
| TAAAGGAACGCCTGTATAAA+AGG | + | chr8.2:65565317-65565336 | None:intergenic | 35.0% | |
| TACATACGAAACAATTGTCG+CGG | - | chr8.2:65563893-65563912 | MS.gene58308:intron | 35.0% | |
| TATGATGAAAACTCGAAGAC+TGG | - | chr8.2:65564004-65564023 | MS.gene58308:intron | 35.0% | |
| TCATCGCATTGCTAAGAATA+TGG | - | chr8.2:65563971-65563990 | MS.gene58308:intron | 35.0% | |
| TGATAACACTACATTGACAG+AGG | - | chr8.2:65565907-65565926 | MS.gene58308:CDS | 35.0% | |
| TGCATAAACGGATAAACTGA+TGG | + | chr8.2:65565675-65565694 | None:intergenic | 35.0% | |
| TGTTTCCAAAGAGTGAAACT+TGG | + | chr8.2:65565578-65565597 | None:intergenic | 35.0% | |
| TTAAGCATGGTATGTCCTAA+AGG | + | chr8.2:65565334-65565353 | None:intergenic | 35.0% | |
| TTGCAGAAAATACGGAGAAA+AGG | - | chr8.2:65563754-65563773 | MS.gene58308:intron | 35.0% | |
| TTGTATCTGTTGATCGAAAC+GGG | - | chr8.2:65564477-65564496 | MS.gene58308:CDS | 35.0% | |
| ! | AAGGATACTAAGTCCCTTTT+TGG | + | chr8.2:65565227-65565246 | None:intergenic | 35.0% |
| ! | AATGTATCGACGTTTAAGCA+TGG | + | chr8.2:65565347-65565366 | None:intergenic | 35.0% |
| ! | GAAATTCAAGTTTCAAGCAC+TGG | + | chr8.2:65564691-65564710 | None:intergenic | 35.0% |
| ! | TGCTCTTTTTCCCTTTTCTT+CGG | + | chr8.2:65563435-65563454 | None:intergenic | 35.0% |
| ! | TTTTATACAGGCGTTCCTTT+AGG | - | chr8.2:65565316-65565335 | MS.gene58308:CDS | 35.0% |
| ! | TTTTTATGAGCTCTTCAGGA+TGG | - | chr8.2:65565102-65565121 | MS.gene58308:CDS | 35.0% |
| !!! | GATCTTTTAGAATGTCCCTT+AGG | + | chr8.2:65565871-65565890 | None:intergenic | 35.0% |
| !!! | GCTGCTTATTTTTAAAGCAG+TGG | - | chr8.2:65565696-65565715 | MS.gene58308:CDS | 35.0% |
| AAACCCTTTGCTCCTCAAAA+TGG | + | chr8.2:65564616-65564635 | None:intergenic | 40.0% | |
| AAAGGGTTTCAGAGCTGTAT+CGG | - | chr8.2:65564627-65564646 | MS.gene58308:CDS | 40.0% | |
| AAATCACTTTCCTTTGGCTG+TGG | + | chr8.2:65563699-65563718 | None:intergenic | 40.0% | |
| AACTCTTGGAGTGAAACCAA+AGG | + | chr8.2:65563190-65563209 | None:intergenic | 40.0% | |
| AACTTCGTCGTTTCAGAAAG+AGG | - | chr8.2:65564793-65564812 | MS.gene58308:CDS | 40.0% | |
| AAGGCAAGTGAGTTTGATTG+CGG | - | chr8.2:65563722-65563741 | MS.gene58308:CDS | 40.0% | |
| AATCGATTAAAGCGAAGGGT+AGG | - | chr8.2:65563523-65563542 | MS.gene58308:intron | 40.0% | |
| ACTCTTGGAGTGAAACCAAA+GGG | + | chr8.2:65563189-65563208 | None:intergenic | 40.0% | |
| AGAGCGGTAGCAATATTCAA+AGG | + | chr8.2:65563951-65563970 | None:intergenic | 40.0% | |
| AGAGGAGTCTGATATGGATT+GGG | - | chr8.2:65563365-65563384 | MS.gene58308:intron | 40.0% | |
| AGCGGTAGCAATATTCAAAG+GGG | + | chr8.2:65563949-65563968 | None:intergenic | 40.0% | |
| ATCGATTAAAGCGAAGGGTA+GGG | - | chr8.2:65563524-65563543 | MS.gene58308:intron | 40.0% | |
| ATTGGGAATCAGAGTTTGTC+GGG | - | chr8.2:65563382-65563401 | MS.gene58308:intron | 40.0% | |
| ATTTAAACGCCAAGTTCTCG+TGG | + | chr8.2:65563232-65563251 | None:intergenic | 40.0% | |
| CACCTACGAAACCTTTCAAT+TGG | + | chr8.2:65564424-65564443 | None:intergenic | 40.0% | |
| CATAGAGACAACTGAAGATG+TGG | + | chr8.2:65564713-65564732 | None:intergenic | 40.0% | |
| CATCTTCAGTTGTCTCTATG+CGG | - | chr8.2:65564713-65564732 | MS.gene58308:CDS | 40.0% | |
| CATTTGTCCAAAGACAGCAT+AGG | + | chr8.2:65564555-65564574 | None:intergenic | 40.0% | |
| CTATGCTGTCTTTGGACAAA+TGG | - | chr8.2:65564553-65564572 | MS.gene58308:CDS | 40.0% | |
| GAAAAAGAAGGTTGAGGAGA+AGG | - | chr8.2:65563590-65563609 | MS.gene58308:intron | 40.0% | |
| GAATCAAATACAGTGTCAGC+AGG | + | chr8.2:65564374-65564393 | None:intergenic | 40.0% | |
| GAGCGGTAGCAATATTCAAA+GGG | + | chr8.2:65563950-65563969 | None:intergenic | 40.0% | |
| GATTGGGAATCAGAGTTTGT+CGG | - | chr8.2:65563381-65563400 | MS.gene58308:intron | 40.0% | |
| GTCTTCCAAGTTTCACTCTT+TGG | - | chr8.2:65565570-65565589 | MS.gene58308:CDS | 40.0% | |
| TATGGTTCAGAGGAAGAGTT+TGG | - | chr8.2:65563669-65563688 | MS.gene58308:intron | 40.0% | |
| TGCCAATTGAAAGGTTTCGT+AGG | - | chr8.2:65564419-65564438 | MS.gene58308:CDS | 40.0% | |
| TGTATCTGTTGATCGAAACG+GGG | - | chr8.2:65564478-65564497 | MS.gene58308:CDS | 40.0% | |
| TGTTGTAGATGGGTACACTT+TGG | - | chr8.2:65564862-65564881 | MS.gene58308:CDS | 40.0% | |
| TTTCGCTGAACTGTCGAAAA+GGG | - | chr8.2:65564274-65564293 | MS.gene58308:CDS | 40.0% | |
| ! | AAGAACTTGCACAGCTTTTG+TGG | - | chr8.2:65564327-65564346 | MS.gene58308:CDS | 40.0% |
| ! | AGAACTTGCACAGCTTTTGT+GGG | - | chr8.2:65564328-65564347 | MS.gene58308:CDS | 40.0% |
| ! | AGTCGATAAGAAGCTTGCTT+TGG | - | chr8.2:65564895-65564914 | MS.gene58308:CDS | 40.0% |
| ! | CACTTTTACTTTCCTGCAGT+GGG | - | chr8.2:65565811-65565830 | MS.gene58308:CDS | 40.0% |
| ! | GCATTGGATGGTGATGATAA+CGG | - | chr8.2:65563342-65563361 | MS.gene58308:intron | 40.0% |
| ! | TGTTAGCACTGGACTTGAAT+GGG | - | chr8.2:65564829-65564848 | MS.gene58308:CDS | 40.0% |
| ! | TTGTTAGCACTGGACTTGAA+TGG | - | chr8.2:65564828-65564847 | MS.gene58308:CDS | 40.0% |
| ! | TTTTCGCTGAACTGTCGAAA+AGG | - | chr8.2:65564273-65564292 | MS.gene58308:CDS | 40.0% |
| !! | AGATTGCACTGACTAAAGTC+GGG | - | chr8.2:65564180-65564199 | MS.gene58308:CDS | 40.0% |
| !! | GAAAACTCTCAGCCATTTTG+AGG | - | chr8.2:65564601-65564620 | MS.gene58308:CDS | 40.0% |
| !! | GAGATTGCACTGACTAAAGT+CGG | - | chr8.2:65564179-65564198 | MS.gene58308:CDS | 40.0% |
| !! | GTTTCAAGCACTGGTTTACA+AGG | + | chr8.2:65564682-65564701 | None:intergenic | 40.0% |
| AAAGAAGGTTGAGGAGAAGG+TGG | - | chr8.2:65563593-65563612 | MS.gene58308:intron | 45.0% | |
| AAGGGTTTCAGAGCTGTATC+GGG | - | chr8.2:65564628-65564647 | MS.gene58308:CDS | 45.0% | |
| AAGTTGCTTGAGGATACCGA+TGG | - | chr8.2:65563462-65563481 | MS.gene58308:intron | 45.0% | |
| ACAATTGTCGCGGTTGCAAA+AGG | - | chr8.2:65563903-65563922 | MS.gene58308:intron | 45.0% | |
| AGGATACCGATGGAATGGAT+TGG | - | chr8.2:65563472-65563491 | MS.gene58308:intron | 45.0% | |
| ATCAGAGTTTGTCGGGGAAT+TGG | - | chr8.2:65563389-65563408 | MS.gene58308:intron | 45.0% | |
| ATCAGCTTGGGACTATAGCT+TGG | - | chr8.2:65564528-65564547 | MS.gene58308:CDS | 45.0% | |
| ATTCCTTGAGCTGAGCATTC+AGG | + | chr8.2:65564086-65564105 | None:intergenic | 45.0% | |
| CAACGATACGAGTTTCCAAC+CGG | + | chr8.2:65565377-65565396 | None:intergenic | 45.0% | |
| CAATCTATCTCCTCTAGCAC+CGG | + | chr8.2:65563319-65563338 | None:intergenic | 45.0% | |
| CACACACCAATCCATTCCAT+CGG | + | chr8.2:65563481-65563500 | None:intergenic | 45.0% | |
| CGACAGTTCAGCGAAAAGAT+CGG | + | chr8.2:65564270-65564289 | None:intergenic | 45.0% | |
| CGTATCGTTGTCCTATCAAG+AGG | - | chr8.2:65565387-65565406 | MS.gene58308:CDS | 45.0% | |
| CTTAGCAATGCGATGAAGAG+CGG | + | chr8.2:65563967-65563986 | None:intergenic | 45.0% | |
| GACAGTTCAGCGAAAAGATC+GGG | + | chr8.2:65564269-65564288 | None:intergenic | 45.0% | |
| GAGAGGAGTCTGATATGGAT+TGG | - | chr8.2:65563364-65563383 | MS.gene58308:intron | 45.0% | |
| GCAAAAGTCGAAGTTGCTTG+AGG | - | chr8.2:65563452-65563471 | MS.gene58308:intron | 45.0% | |
| GCAATATTCAAAGGGGAGAG+AGG | + | chr8.2:65563942-65563961 | None:intergenic | 45.0% | |
| GGCTTATGCGATGGAAGATT+TGG | - | chr8.2:65563545-65563564 | MS.gene58308:intron | 45.0% | |
| GGTCATCTTCTTGTTAGCAC+TGG | - | chr8.2:65564818-65564837 | MS.gene58308:CDS | 45.0% | |
| TAACGGAGAGGAGTCTGATA+TGG | - | chr8.2:65563359-65563378 | MS.gene58308:intron | 45.0% | |
| TCGTCGTTTCAGAAAGAGGT+TGG | - | chr8.2:65564797-65564816 | MS.gene58308:CDS | 45.0% | |
| TTACCGAGCTCCGAAGAAAA+GGG | - | chr8.2:65563422-65563441 | MS.gene58308:intron | 45.0% | |
| TTGAGAGCTGACCTCTTGAT+AGG | + | chr8.2:65565401-65565420 | None:intergenic | 45.0% | |
| TTGGGAATCAGAGTTTGTCG+GGG | - | chr8.2:65563383-65563402 | MS.gene58308:intron | 45.0% | |
| ! | AGGAGATAGATTGGCTGCAT+TGG | - | chr8.2:65563326-65563345 | MS.gene58308:intron | 45.0% |
| ! | GATAGATTGGCTGCATTGGA+TGG | - | chr8.2:65563330-65563349 | MS.gene58308:intron | 45.0% |
| ! | GCACTTTTACTTTCCTGCAG+TGG | - | chr8.2:65565810-65565829 | MS.gene58308:CDS | 45.0% |
| ! | TGAACAGGTGGAGTACCTAA+GGG | - | chr8.2:65565853-65565872 | MS.gene58308:CDS | 45.0% |
| ! | TTTCCCTTTTCTTCGGAGCT+CGG | + | chr8.2:65563428-65563447 | None:intergenic | 45.0% |
| ! | TTTTACTTTCCTGCAGTGGG+AGG | - | chr8.2:65565814-65565833 | MS.gene58308:CDS | 45.0% |
| !! | AAGCTTGCTTTGGAGATCGA+TGG | - | chr8.2:65564905-65564924 | MS.gene58308:CDS | 45.0% |
| !! | ATGGAATGGATTGGTGTGTG+AGG | - | chr8.2:65563481-65563500 | MS.gene58308:intron | 45.0% |
| !! | CAGCCATTTTGAGGAGCAAA+GGG | - | chr8.2:65564610-65564629 | MS.gene58308:CDS | 45.0% |
| !! | GATTGCACTGACTAAAGTCG+GGG | - | chr8.2:65564181-65564200 | MS.gene58308:CDS | 45.0% |
| !! | TCAAGCACTGGTTTACAAGG+TGG | + | chr8.2:65564679-65564698 | None:intergenic | 45.0% |
| !! | TCAGCCATTTTGAGGAGCAA+AGG | - | chr8.2:65564609-65564628 | MS.gene58308:CDS | 45.0% |
| !! | TGGAATGGATTGGTGTGTGA+GGG | - | chr8.2:65563482-65563501 | MS.gene58308:intron | 45.0% |
| AAGAAGTCCGCCTCCAACTT+TGG | + | chr8.2:65564132-65564151 | None:intergenic | 50.0% | |
| ACTTCAAGGAGGGTCTGAAC+AGG | - | chr8.2:65565838-65565857 | MS.gene58308:CDS | 50.0% | |
| AGTGGGAGGAACTTCAAGGA+GGG | - | chr8.2:65565828-65565847 | MS.gene58308:CDS | 50.0% | |
| ATTCAAAGGGGAGAGAGGTG+AGG | + | chr8.2:65563937-65563956 | None:intergenic | 50.0% | |
| GAGGATAAAGTTTCCAGCGC+TGG | - | chr8.2:65564743-65564762 | MS.gene58308:CDS | 50.0% | |
| GCAGACTGCAGATGATGTGT+TGG | - | chr8.2:65563866-65563885 | MS.gene58308:intron | 50.0% | |
| GCCAAGTTCTCGTGGTAACT+GGG | + | chr8.2:65563224-65563243 | None:intergenic | 50.0% | |
| GCTTGAGGATACCGATGGAA+TGG | - | chr8.2:65563467-65563486 | MS.gene58308:intron | 50.0% | |
| GCTTGGTCCTATGCTGTCTT+TGG | - | chr8.2:65564545-65564564 | MS.gene58308:CDS | 50.0% | |
| GTTACCGAGCTCCGAAGAAA+AGG | - | chr8.2:65563421-65563440 | MS.gene58308:intron | 50.0% | |
| TCCCAGTTACCACGAGAACT+TGG | - | chr8.2:65563220-65563239 | MS.gene58308:CDS | 50.0% | |
| TTCAAAGGGGAGAGAGGTGA+GGG | + | chr8.2:65563936-65563955 | None:intergenic | 50.0% | |
| TTCGGAGCTCGGTAACCAAA+CGG | + | chr8.2:65563417-65563436 | None:intergenic | 50.0% | |
| TTGAGCTGAGCATTCAGGCA+AGG | + | chr8.2:65564081-65564100 | None:intergenic | 50.0% | |
| TTGCCTGAATGCTCAGCTCA+AGG | - | chr8.2:65564080-65564099 | MS.gene58308:intron | 50.0% | |
| ! | CCAGCGCTGGAAAAACGAAA+AGG | - | chr8.2:65564756-65564775 | MS.gene58308:CDS | 50.0% |
| ! | CGGTGCTAGAGGAGATAGAT+TGG | - | chr8.2:65563317-65563336 | MS.gene58308:intron | 50.0% |
| ! | CTGAACAGGTGGAGTACCTA+AGG | - | chr8.2:65565852-65565871 | MS.gene58308:CDS | 50.0% |
| ! | GATAGTAAAGCCGGTGCTAG+AGG | - | chr8.2:65563306-65563325 | MS.gene58308:intron | 50.0% |
| !! | CCTTTTCGTTTTTCCAGCGC+TGG | + | chr8.2:65564759-65564778 | None:intergenic | 50.0% |
| !! | GGATGGTGATGATAACGGAG+AGG | - | chr8.2:65563347-65563366 | MS.gene58308:intron | 50.0% |
| CAGTGGGAGGAACTTCAAGG+AGG | - | chr8.2:65565827-65565846 | MS.gene58308:CDS | 55.0% | |
| CGCCAAGTTCTCGTGGTAAC+TGG | + | chr8.2:65563225-65563244 | None:intergenic | 55.0% | |
| CGTCGATACATTACGGCTGC+CGG | - | chr8.2:65565355-65565374 | MS.gene58308:CDS | 55.0% | |
| CTGCAGTGGGAGGAACTTCA+AGG | - | chr8.2:65565824-65565843 | MS.gene58308:CDS | 55.0% | |
| CTTGAAGTTCCTCCCACTGC+AGG | + | chr8.2:65565826-65565845 | None:intergenic | 55.0% | |
| GAAGGGTAGGGCTTATGCGA+TGG | - | chr8.2:65563536-65563555 | MS.gene58308:intron | 55.0% | |
| GATACATTACGGCTGCCGGT+TGG | - | chr8.2:65565359-65565378 | MS.gene58308:CDS | 55.0% | |
| GTCGGGGAATTGGATCCGTT+TGG | - | chr8.2:65563399-65563418 | MS.gene58308:intron | 55.0% | |
| GTCTCTATGCGGTGAGCTTG+AGG | - | chr8.2:65564724-65564743 | MS.gene58308:CDS | 55.0% | |
| GTTTGGACTGCCACAGCCAA+AGG | - | chr8.2:65563686-65563705 | MS.gene58308:CDS | 55.0% | |
| TCAAGGAGGGTCTGAACAGG+TGG | - | chr8.2:65565841-65565860 | MS.gene58308:CDS | 55.0% | |
| GCGCTGTCCAAAGTTGGAGG+CGG | - | chr8.2:65564122-65564141 | MS.gene58308:intron | 60.0% | |
| TTGGTGTGTGAGGGCGAGAG+AGG | - | chr8.2:65563491-65563510 | MS.gene58308:intron | 60.0% | |
| ! | GCTTGGGCGCTGTCCAAAGT+TGG | - | chr8.2:65564116-65564135 | MS.gene58308:intron | 60.0% |
| ! | TGGGCGCTGTCCAAAGTTGG+AGG | - | chr8.2:65564119-65564138 | MS.gene58308:intron | 60.0% |
| GTGTGTGAGGGCGAGAGAGG+TGG | - | chr8.2:65563494-65563513 | MS.gene58308:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 65563141 | 65565937 | 65563141 | ID=MS.gene58308 |
| chr8.2 | mRNA | 65563141 | 65565937 | 65563141 | ID=MS.gene58308.t1;Parent=MS.gene58308 |
| chr8.2 | exon | 65564125 | 65565937 | 65564125 | ID=MS.gene58308.t1.exon1;Parent=MS.gene58308.t1 |
| chr8.2 | CDS | 65564125 | 65565937 | 65564125 | ID=cds.MS.gene58308.t1;Parent=MS.gene58308.t1 |
| chr8.2 | exon | 65563670 | 65563752 | 65563670 | ID=MS.gene58308.t1.exon2;Parent=MS.gene58308.t1 |
| chr8.2 | CDS | 65563670 | 65563752 | 65563670 | ID=cds.MS.gene58308.t1;Parent=MS.gene58308.t1 |
| chr8.2 | exon | 65563141 | 65563248 | 65563141 | ID=MS.gene58308.t1.exon3;Parent=MS.gene58308.t1 |
| chr8.2 | CDS | 65563141 | 65563248 | 65563141 | ID=cds.MS.gene58308.t1;Parent=MS.gene58308.t1 |
| Gene Sequence |
| Protein sequence |
