Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61162.t1 | XP_003604353.1 | 98.3 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 2.40E-296 | 1027.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61162.t1 | Q9M8L4 | 78.0 | 522 | 112 | 1 | 1 | 519 | 1 | 522 | 1.8e-244 | 846.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61162.t1 | G7JGV7 | 98.3 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 1.8e-296 | 1027.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049254 | MS.gene61162 | 0.825896 | 3.65E-54 | -1.69E-46 |
| MS.gene049283 | MS.gene61162 | 0.810355 | 1.20E-50 | -1.69E-46 |
| MS.gene049424 | MS.gene61162 | 0.843717 | 1.18E-58 | -1.69E-46 |
| MS.gene049567 | MS.gene61162 | 0.812414 | 4.29E-51 | -1.69E-46 |
| MS.gene049983 | MS.gene61162 | 0.820785 | 5.71E-53 | -1.69E-46 |
| MS.gene050559 | MS.gene61162 | 0.836181 | 1.09E-56 | -1.69E-46 |
| MS.gene050561 | MS.gene61162 | 0.832312 | 1.02E-55 | -1.69E-46 |
| MS.gene050562 | MS.gene61162 | 0.830641 | 2.62E-55 | -1.69E-46 |
| MS.gene051122 | MS.gene61162 | 0.813526 | 2.45E-51 | -1.69E-46 |
| MS.gene051744 | MS.gene61162 | 0.82987 | 4.04E-55 | -1.69E-46 |
| MS.gene051832 | MS.gene61162 | 0.816803 | 4.58E-52 | -1.69E-46 |
| MS.gene052108 | MS.gene61162 | 0.805599 | 1.24E-49 | -1.69E-46 |
| MS.gene052176 | MS.gene61162 | 0.815064 | 1.12E-51 | -1.69E-46 |
| MS.gene052685 | MS.gene61162 | 0.807842 | 4.15E-50 | -1.69E-46 |
| MS.gene052954 | MS.gene61162 | 0.803343 | 3.65E-49 | -1.69E-46 |
| MS.gene053006 | MS.gene61162 | 0.810136 | 1.34E-50 | -1.69E-46 |
| MS.gene053094 | MS.gene61162 | 0.808645 | 2.80E-50 | -1.69E-46 |
| MS.gene053188 | MS.gene61162 | 0.810687 | 1.02E-50 | -1.69E-46 |
| MS.gene053189 | MS.gene61162 | 0.811514 | 6.74E-51 | -1.69E-46 |
| MS.gene053216 | MS.gene61162 | 0.8027 | 4.95E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene61162 | 0.859026 | 5.50E-63 | -1.69E-46 |
| MS.gene053963 | MS.gene61162 | 0.872727 | 2.55E-67 | -1.69E-46 |
| MS.gene05410 | MS.gene61162 | 0.820671 | 6.07E-53 | -1.69E-46 |
| MS.gene054222 | MS.gene61162 | 0.833374 | 5.53E-56 | -1.69E-46 |
| MS.gene05439 | MS.gene61162 | 0.802462 | 5.55E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene61162 | 0.805081 | 1.59E-49 | -1.69E-46 |
| MS.gene054576 | MS.gene61162 | 0.840507 | 8.34E-58 | -1.69E-46 |
| MS.gene054892 | MS.gene61162 | 0.819471 | 1.14E-52 | -1.69E-46 |
| MS.gene054893 | MS.gene61162 | 0.826059 | 3.34E-54 | -1.69E-46 |
| MS.gene055222 | MS.gene61162 | 0.800645 | 1.31E-48 | -1.69E-46 |
| MS.gene055226 | MS.gene61162 | 0.820734 | 5.87E-53 | -1.69E-46 |
| MS.gene056506 | MS.gene61162 | 0.830632 | 2.63E-55 | -1.69E-46 |
| MS.gene056699 | MS.gene61162 | 0.81935 | 1.22E-52 | -1.69E-46 |
| MS.gene056779 | MS.gene61162 | 0.818879 | 1.56E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene61162 | 0.805913 | 1.06E-49 | -1.69E-46 |
| MS.gene057102 | MS.gene61162 | 0.801735 | 7.83E-49 | -1.69E-46 |
| MS.gene05761 | MS.gene61162 | 0.802212 | 6.24E-49 | -1.69E-46 |
| MS.gene058008 | MS.gene61162 | 0.826472 | 2.66E-54 | -1.69E-46 |
| MS.gene058009 | MS.gene61162 | 0.801415 | 9.10E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene61162 | 0.801795 | 7.61E-49 | -1.69E-46 |
| MS.gene058592 | MS.gene61162 | 0.810102 | 1.36E-50 | -1.69E-46 |
| MS.gene058635 | MS.gene61162 | 0.830246 | 3.27E-55 | -1.69E-46 |
| MS.gene059170 | MS.gene61162 | 0.804239 | 2.38E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene61162 | 0.82146 | 3.99E-53 | -1.69E-46 |
| MS.gene05985 | MS.gene61162 | -0.800204 | 1.61E-48 | -1.69E-46 |
| MS.gene059965 | MS.gene61162 | 0.815393 | 9.46E-52 | -1.69E-46 |
| MS.gene060412 | MS.gene61162 | 0.85284 | 3.55E-61 | -1.69E-46 |
| MS.gene060520 | MS.gene61162 | 0.805957 | 1.04E-49 | -1.69E-46 |
| MS.gene060777 | MS.gene61162 | 0.803015 | 4.27E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene61162 | 0.962728 | 3.18E-121 | -1.69E-46 |
| MS.gene060932 | MS.gene61162 | 0.80025 | 1.57E-48 | -1.69E-46 |
| MS.gene060937 | MS.gene61162 | 0.804163 | 2.46E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene022257 | MS.gene61162 | PPI |
| MS.gene25914 | MS.gene61162 | PPI |
| MS.gene61162 | MS.gene074392 | PPI |
| MS.gene61162 | MS.gene70587 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61162.t1 | MTR_4g009920 | 98.266 | 519 | 9 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1048 |
| MS.gene61162.t1 | MTR_4g009920 | 98.225 | 507 | 9 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1026 |
| MS.gene61162.t1 | MTR_4g009900 | 42.453 | 106 | 27 | 4 | 309 | 413 | 60 | 132 | 1.22e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61162.t1 | AT1G80460 | 77.969 | 522 | 112 | 1 | 1 | 519 | 1 | 522 | 0.0 | 832 |
| MS.gene61162.t1 | AT1G80460 | 71.839 | 522 | 104 | 2 | 1 | 519 | 1 | 482 | 0.0 | 771 |
Find 114 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATAGACACTTGGTTGATT+TGG | 0.226109 | 4.2:-90238289 | MS.gene61162:CDS |
| GATTCAATGCACAAAGATTC+TGG | 0.239459 | 4.2:-90237594 | MS.gene61162:CDS |
| CCGGATTAGCTGTTGGGATT+TGG | 0.260537 | 4.2:-90236914 | MS.gene61162:CDS |
| CTCTTCACAATGCTCTTGTT+TGG | 0.272363 | 4.2:-90239525 | MS.gene61162:CDS |
| AGATCCTTCGAGTGCATAAT+TGG | 0.272694 | 4.2:+90237878 | None:intergenic |
| ATTAGTAATTCAGAAATTAT+AGG | 0.274502 | 4.2:-90238119 | MS.gene61162:CDS |
| ATTATAGGCAATGTTTCTTC+TGG | 0.283345 | 4.2:-90238104 | MS.gene61162:CDS |
| GCATGATCCAATGGAGATAT+TGG | 0.330740 | 4.2:-90239686 | MS.gene61162:CDS |
| TCTTCTGGATGGCCAGTTGC+TGG | 0.334542 | 4.2:-90238089 | MS.gene61162:CDS |
| GCACTGAAATATGTGCTAAT+AGG | 0.336748 | 4.2:+90238389 | None:intergenic |
| TTCGTACTACCTCTGTTTGC+AGG | 0.345227 | 4.2:-90239495 | MS.gene61162:intron |
| TAGGTTCATCAGCATTGTTC+GGG | 0.358557 | 4.2:+90238211 | None:intergenic |
| TATAGAGGCTCTGGCATTAG+AGG | 0.360156 | 4.2:-90237787 | MS.gene61162:CDS |
| AAAGAGAGACTACTCTTGTT+TGG | 0.360374 | 4.2:-90239567 | MS.gene61162:CDS |
| TTAGGTTCATCAGCATTGTT+CGG | 0.360447 | 4.2:+90238210 | None:intergenic |
| ATCCCAATCGCTGGATGTTT+AGG | 0.365473 | 4.2:-90238065 | MS.gene61162:CDS |
| CTCTAATGGTTGAAGAAAAT+AGG | 0.366750 | 4.2:-90236833 | MS.gene61162:CDS |
| CATTACCAAGGCAGTGGATA+AGG | 0.374568 | 4.2:-90239647 | MS.gene61162:CDS |
| TTTGAAACTTCTGTGGTTGA+TGG | 0.380869 | 4.2:-90238366 | MS.gene61162:CDS |
| GCATAATTGGTTGGAGCATT+CGG | 0.386294 | 4.2:+90237891 | None:intergenic |
| GGGGAGGCTAAAAGTACTTA+TGG | 0.390080 | 4.2:-90238002 | MS.gene61162:CDS |
| TGGTTGATTTGGAACTTAAC+CGG | 0.394053 | 4.2:-90238278 | MS.gene61162:CDS |
| GAAGGATCTGTTGCTATTGC+TGG | 0.394891 | 4.2:-90237864 | MS.gene61162:CDS |
| CCAAATCCCAACAGCTAATC+CGG | 0.396390 | 4.2:+90236914 | None:intergenic |
| TGTTGGGCAGGCGGATTTGT+TGG | 0.401082 | 4.2:-90236997 | MS.gene61162:intron |
| TCACAATGCTCTTGTTTGGA+TGG | 0.410072 | 4.2:-90239521 | MS.gene61162:CDS |
| GATAAATCAGCTAAACCAAT+TGG | 0.412511 | 4.2:-90240662 | MS.gene61162:CDS |
| TTGGACAAGCGTGCCGTAAA+GGG | 0.413690 | 4.2:-90238022 | MS.gene61162:CDS |
| GACAAAGGATTGAAAGCTAT+TGG | 0.414357 | 4.2:-90239601 | MS.gene61162:CDS |
| TTGCTGGAGCTGCGGTGCAG+TGG | 0.423140 | 4.2:-90237848 | MS.gene61162:CDS |
| ATGCAGCCGGATTAGCTGTT+GGG | 0.423707 | 4.2:-90236920 | MS.gene61162:CDS |
| TGCTAAAGATATAGAGGCTC+TGG | 0.423985 | 4.2:-90237796 | MS.gene61162:CDS |
| ATCTGCTACTGCTTGTTCCT+TGG | 0.424132 | 4.2:+90240696 | None:intergenic |
| TGGGATTTGAAGTGCTTTCA+AGG | 0.425709 | 4.2:+90238163 | None:intergenic |
| AAGAGTAGTCTCTCTTTGAT+TGG | 0.427095 | 4.2:+90239573 | None:intergenic |
| CTTGGACAAGCGTGCCGTAA+AGG | 0.431970 | 4.2:-90238023 | MS.gene61162:CDS |
| TGTTGCCTTATCCACTGCCT+TGG | 0.460974 | 4.2:+90239642 | None:intergenic |
| GATCAACATGCGGCAATGCT+TGG | 0.462984 | 4.2:-90238041 | MS.gene61162:CDS |
| TACAAATGCTAAAGATATAG+AGG | 0.466654 | 4.2:-90237802 | MS.gene61162:CDS |
| CACCTAAACATCCAGCGATT+GGG | 0.469707 | 4.2:+90238063 | None:intergenic |
| TTGAAACAGGAGACTGGAAA+AGG | 0.470396 | 4.2:-90238456 | MS.gene61162:intron |
| TCAACTTGATGAGATCCAAT+TGG | 0.485313 | 4.2:+90240647 | None:intergenic |
| AGACTGGAAAAGGAGTTATC+TGG | 0.485413 | 4.2:-90238446 | MS.gene61162:CDS |
| GGTAGATTCATCCCAGTTGA+GGG | 0.489859 | 4.2:+90238184 | None:intergenic |
| TCAACTATAGCTTATAAGCT+TGG | 0.494881 | 4.2:-90237915 | MS.gene61162:CDS |
| GCTGTTGTTTCAATGTCAGC+TGG | 0.495390 | 4.2:+90236957 | None:intergenic |
| TAGGCAATGTTTCTTCTGGA+TGG | 0.500957 | 4.2:-90238100 | MS.gene61162:CDS |
| ACACTCTCCAATATCTCCAT+TGG | 0.503678 | 4.2:+90239679 | None:intergenic |
| GCTAAAAGTACTTATGGTAC+AGG | 0.511298 | 4.2:-90237996 | MS.gene61162:CDS |
| CAGTGGCTTAGAGATGGTCT+TGG | 0.511553 | 4.2:-90237831 | MS.gene61162:CDS |
| TACTTCGTTCCTGCCTTCAA+CGG | 0.512729 | 4.2:-90237744 | MS.gene61162:CDS |
| TCACCTAAACATCCAGCGAT+TGG | 0.515930 | 4.2:+90238062 | None:intergenic |
| GACATTGAAACAACAGCACT+TGG | 0.517787 | 4.2:-90236951 | MS.gene61162:CDS |
| GCGATTGGGATACCAGCAAC+TGG | 0.520352 | 4.2:+90238077 | None:intergenic |
| CAATCCTCCTTTCACTCCAC+CGG | 0.520536 | 4.2:+90238259 | None:intergenic |
| CGGAGCAAACAATCCGTTGA+AGG | 0.521467 | 4.2:+90237731 | None:intergenic |
| CCTTCGAGTGCATAATTGGT+TGG | 0.522306 | 4.2:+90237882 | None:intergenic |
| AACTTAACCGGTGGAGTGAA+AGG | 0.522805 | 4.2:-90238266 | MS.gene61162:CDS |
| GCTTTCATTCTACTGAATAC+CGG | 0.525684 | 4.2:-90237972 | MS.gene61162:CDS |
| AGGTAGATTCATCCCAGTTG+AGG | 0.526716 | 4.2:+90238183 | None:intergenic |
| ATTCATAATTACCCTGCTTG+TGG | 0.528009 | 4.2:+90240608 | None:intergenic |
| CTTGGAGCAGCCTATGCAGC+CGG | 0.534264 | 4.2:-90236933 | MS.gene61162:CDS |
| ACTCAGTTCTATCCACAAGC+AGG | 0.534411 | 4.2:-90240620 | MS.gene61162:CDS |
| CAACCTCTTGATGCAGACTC+AGG | 0.539217 | 4.2:-90237511 | MS.gene61162:intron |
| GCAAACAATCCGTTGAAGGC+AGG | 0.539309 | 4.2:+90237735 | None:intergenic |
| AACGAAGTAAACACCACCAT+TGG | 0.540620 | 4.2:+90237758 | None:intergenic |
| GTGGATAAGGCAACAGCTGA+TGG | 0.545692 | 4.2:-90239634 | MS.gene61162:CDS |
| GTTGCTGGTATCCCAATCGC+TGG | 0.548254 | 4.2:-90238074 | MS.gene61162:CDS |
| GGTTTGCATTACCAAGGCAG+TGG | 0.553429 | 4.2:-90239653 | MS.gene61162:CDS |
| TGATTTAACTACTCCTTCGC+CGG | 0.553584 | 4.2:+90237953 | None:intergenic |
| AACAGCTAATCCGGCTGCAT+AGG | 0.557636 | 4.2:+90236923 | None:intergenic |
| TCAGTGCTTTGAAACTTCTG+TGG | 0.564226 | 4.2:-90238373 | MS.gene61162:CDS |
| TGTTTGGAACAATAGACACT+TGG | 0.574976 | 4.2:-90238298 | MS.gene61162:CDS |
| TATGCAGCCGGATTAGCTGT+TGG | 0.578831 | 4.2:-90236921 | MS.gene61162:CDS |
| TTCATTGGTGCAATTGACCA+AGG | 0.579046 | 4.2:-90240713 | MS.gene61162:CDS |
| CTTGTTTGGAGCAAATCCAC+TGG | 0.582009 | 4.2:-90239553 | MS.gene61162:CDS |
| TGGACAAGCGTGCCGTAAAG+GGG | 0.584821 | 4.2:-90238021 | MS.gene61162:CDS |
| GCGGTGCAGTGGCTTAGAGA+TGG | 0.585645 | 4.2:-90237837 | MS.gene61162:CDS |
| TTTCTTCAACCATTAGAGGA+CGG | 0.587520 | 4.2:+90236838 | None:intergenic |
| AAAACATATGCTCTCAAGCA+CGG | 0.589815 | 4.2:+90237635 | None:intergenic |
| AATAACAAGGTATACTAGCA+AGG | 0.590541 | 4.2:-90237673 | MS.gene61162:CDS |
| ACGGATTGTTTGCTCCGTGG+TGG | 0.592208 | 4.2:-90237725 | MS.gene61162:CDS |
| GGAAAATGTGGATGCTGTCA+AGG | 0.594676 | 4.2:-90238345 | MS.gene61162:CDS |
| TGTTGCTATTGCTGGAGCTG+CGG | 0.596487 | 4.2:-90237856 | MS.gene61162:CDS |
| CAAACAAGAGCATTGTGAAG+AGG | 0.598923 | 4.2:+90239526 | None:intergenic |
| TCAACGGATTGTTTGCTCCG+TGG | 0.599214 | 4.2:-90237728 | MS.gene61162:CDS |
| ATGGGTGGAGCATGATCCAA+TGG | 0.600525 | 4.2:-90239695 | MS.gene61162:CDS |
| AAACCTGAGTCTGCATCAAG+AGG | 0.602107 | 4.2:+90237508 | None:intergenic |
| GGAGATATTGGAGAGTGTGA+AGG | 0.603088 | 4.2:-90239674 | MS.gene61162:CDS |
| TATAAGCTATAGTTGACAGA+AGG | 0.613391 | 4.2:+90237922 | None:intergenic |
| CTCAGTTCTATCCACAAGCA+GGG | 0.613869 | 4.2:-90240619 | MS.gene61162:intron |
| GATGCTCGTGGGATTTGTAT+CGG | 0.615161 | 4.2:-90237696 | MS.gene61162:CDS |
| TCTGTGGTTGATGGAAAATG+TGG | 0.618354 | 4.2:-90238357 | MS.gene61162:CDS |
| CTATAGTTGACAGAAGGCCA+TGG | 0.621798 | 4.2:+90237928 | None:intergenic |
| GCATTAGAGGTAGAATCCAA+TGG | 0.626496 | 4.2:-90237774 | MS.gene61162:CDS |
| ATTCTACTGAATACCGGCGA+AGG | 0.627934 | 4.2:-90237966 | MS.gene61162:CDS |
| CTGGAAAAGGAGTTATCTGG+TGG | 0.628620 | 4.2:-90238443 | MS.gene61162:CDS |
| TTGTTGATTTAACAGATGGG+TGG | 0.628858 | 4.2:-90239710 | MS.gene61162:intron |
| GATGGATTCAATGTGGACAA+AGG | 0.629833 | 4.2:-90239616 | MS.gene61162:CDS |
| TGTGAAGGTTTGCATTACCA+AGG | 0.634692 | 4.2:-90239659 | MS.gene61162:CDS |
| CCAACCAATTATGCACTCGA+AGG | 0.641638 | 4.2:-90237882 | MS.gene61162:CDS |
| TGGTGGCGTGATGATGCTCG+TGG | 0.642857 | 4.2:-90237708 | MS.gene61162:CDS |
| GGAGTAGTTAAATCAAACCA+TGG | 0.660899 | 4.2:-90237945 | MS.gene61162:CDS |
| GGTGGCGTGATGATGCTCGT+GGG | 0.662938 | 4.2:-90237707 | MS.gene61162:CDS |
| ATTGTGAAGAGGAGCACCAG+TGG | 0.665290 | 4.2:+90239537 | None:intergenic |
| ACAAGCGTGCCGTAAAGGGG+AGG | 0.668849 | 4.2:-90238018 | MS.gene61162:CDS |
| CGAGCATCATCACGCCACCA+CGG | 0.670243 | 4.2:+90237711 | None:intergenic |
| AAAAGAGGACCTGCAAACAG+AGG | 0.674216 | 4.2:+90239486 | None:intergenic |
| TTGATTTGGAACTTAACCGG+TGG | 0.677686 | 4.2:-90238275 | MS.gene61162:CDS |
| GGATTTGTATCGGAATAACA+AGG | 0.684634 | 4.2:-90237686 | MS.gene61162:CDS |
| TTAACCGGTGGAGTGAAAGG+AGG | 0.687751 | 4.2:-90238263 | MS.gene61162:CDS |
| ATGTTTAGGTGATCAACATG+CGG | 0.705152 | 4.2:-90238051 | MS.gene61162:CDS |
| AACAGCTGATGGATTCAATG+TGG | 0.722250 | 4.2:-90239623 | MS.gene61162:CDS |
| TTAGAGGTAGAATCCAATGG+TGG | 0.726999 | 4.2:-90237771 | MS.gene61162:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTGAAAATTTTGAT+GGG | - | chr4.2:90236930-90236949 | MS.gene61162:CDS | 10.0% |
| !!! | TTTTTTATTGAAAATTTTGA+TGG | - | chr4.2:90236929-90236948 | MS.gene61162:CDS | 10.0% |
| !! | AAAGAGAAAAAGAAAAATAA+GGG | - | chr4.2:90240346-90240365 | MS.gene61162:intron | 15.0% |
| !! | ATTAGTAATTCAGAAATTAT+AGG | - | chr4.2:90239376-90239395 | MS.gene61162:intron | 15.0% |
| !! | TCAATAAAAAAACAAAAAAG+AGG | + | chr4.2:90236920-90236939 | None:intergenic | 15.0% |
| !! | TTAAAAAGTGATCAATTTAA+GGG | + | chr4.2:90238572-90238591 | None:intergenic | 15.0% |
| !! | TTTAAAAAGTGATCAATTTA+AGG | + | chr4.2:90238573-90238592 | None:intergenic | 15.0% |
| !!! | TCTGAATTACTAATAATTTT+AGG | + | chr4.2:90239370-90239389 | None:intergenic | 15.0% |
| !!! | TTGTTGTGTTTTTATAATTA+TGG | - | chr4.2:90236954-90236973 | MS.gene61162:CDS | 15.0% |
| !!! | TTTGTTGTATTTTGTAATTA+TGG | - | chr4.2:90237025-90237044 | MS.gene61162:intron | 15.0% |
| !! | ATGATCTATATAATGAAATC+AGG | + | chr4.2:90238803-90238822 | None:intergenic | 20.0% |
| !! | CAAAGAGAAAAAGAAAAATA+AGG | - | chr4.2:90240345-90240364 | MS.gene61162:intron | 20.0% |
| !! | CTTCAAATTAAATATGTATC+CGG | + | chr4.2:90238201-90238220 | None:intergenic | 20.0% |
| !! | GTTATATATACCAATATCAA+GGG | - | chr4.2:90240244-90240263 | MS.gene61162:intron | 20.0% |
| !! | TAACGAAATATTACAATGAA+AGG | + | chr4.2:90237728-90237747 | None:intergenic | 20.0% |
| !! | TATCGAAAAGATAGAAAATA+TGG | + | chr4.2:90240061-90240080 | None:intergenic | 20.0% |
| !! | TGTTATATATACCAATATCA+AGG | - | chr4.2:90240243-90240262 | MS.gene61162:intron | 20.0% |
| !! | TTGACAATAATTTGAGAAAA+TGG | - | chr4.2:90238143-90238162 | MS.gene61162:CDS | 20.0% |
| !! | TTGTAAATCTGATACATTAA+TGG | + | chr4.2:90237362-90237381 | None:intergenic | 20.0% |
| !!! | AAACAAAATAGTCTTAATAG+AGG | + | chr4.2:90240300-90240319 | None:intergenic | 20.0% |
| !!! | AACAAAATAGTCTTAATAGA+GGG | + | chr4.2:90240299-90240318 | None:intergenic | 20.0% |
| !!! | AGAATTTTTGTTGATAATGT+TGG | - | chr4.2:90240481-90240500 | MS.gene61162:intron | 20.0% |
| !!! | ATTTTGATTCTTGAATGTAA+GGG | - | chr4.2:90237158-90237177 | MS.gene61162:intron | 20.0% |
| !!! | ATTTTGTTGAAAATATTGAC+TGG | - | chr4.2:90237747-90237766 | MS.gene61162:CDS | 20.0% |
| !!! | GAATTTTTGTTGATAATGTT+GGG | - | chr4.2:90240482-90240501 | MS.gene61162:intron | 20.0% |
| !!! | GATGTTATTATTTTTGAAAC+AGG | - | chr4.2:90239026-90239045 | MS.gene61162:intron | 20.0% |
| !!! | TATTAGTGAATATTTTTCCT+TGG | + | chr4.2:90238736-90238755 | None:intergenic | 20.0% |
| !!! | TTATTTTCTCAAGTAAAGAA+AGG | + | chr4.2:90240199-90240218 | None:intergenic | 20.0% |
| !!! | TTTTCTTTTTCTCTTTGATT+GGG | + | chr4.2:90240342-90240361 | None:intergenic | 20.0% |
| !!! | TTTTGATTGCAAATTTTGAT+GGG | - | chr4.2:90237085-90237104 | MS.gene61162:intron | 20.0% |
| !!! | TTTTTCTTTTTCTCTTTGAT+TGG | + | chr4.2:90240343-90240362 | None:intergenic | 20.0% |
| !!! | TTTTTGATTGCAAATTTTGA+TGG | - | chr4.2:90237084-90237103 | MS.gene61162:intron | 20.0% |
| ! | AAAAAGAAAGTAGATTGTTG+GGG | - | chr4.2:90240685-90240704 | MS.gene61162:CDS | 25.0% |
| ! | AAGAAAAAAGATGCATTGTT+TGG | - | chr4.2:90239181-90239200 | MS.gene61162:intron | 25.0% |
| ! | AGTAAGAAGAAGAATAAAAG+AGG | + | chr4.2:90238027-90238046 | None:intergenic | 25.0% |
| ! | ATCTATATAATGAAATCAGG+AGG | + | chr4.2:90238800-90238819 | None:intergenic | 25.0% |
| ! | ATTTATCCAAACATAGAGAA+TGG | + | chr4.2:90238527-90238546 | None:intergenic | 25.0% |
| ! | CAGAAAATGTTTATCTTGAT+AGG | - | chr4.2:90240416-90240435 | MS.gene61162:intron | 25.0% |
| ! | GAAAAAGAAAGTAGATTGTT+GGG | - | chr4.2:90240684-90240703 | MS.gene61162:CDS | 25.0% |
| ! | GAAAATATGGAACTAAATGA+AGG | + | chr4.2:90240048-90240067 | None:intergenic | 25.0% |
| ! | TAAATTTGTCTTTCAGTAGT+CGG | - | chr4.2:90237214-90237233 | MS.gene61162:intron | 25.0% |
| ! | TACAAATGCTAAAGATATAG+AGG | - | chr4.2:90239693-90239712 | MS.gene61162:CDS | 25.0% |
| ! | TCTATATAATGAAATCAGGA+GGG | + | chr4.2:90238799-90238818 | None:intergenic | 25.0% |
| ! | TGATACTCTCTTAATCTATA+AGG | + | chr4.2:90238711-90238730 | None:intergenic | 25.0% |
| ! | TTGATTTCTTGTAAGCAAAA+AGG | - | chr4.2:90238245-90238264 | MS.gene61162:CDS | 25.0% |
| ! | TTTACGACAAAAACAAACAT+GGG | + | chr4.2:90237057-90237076 | None:intergenic | 25.0% |
| ! | TTTATAGGTATGCTTAATCT+AGG | - | chr4.2:90238666-90238685 | MS.gene61162:intron | 25.0% |
| ! | TTTATCCAAACATAGAGAAT+GGG | + | chr4.2:90238526-90238545 | None:intergenic | 25.0% |
| !! | AACTATCGAAAGACAAATTT+TGG | + | chr4.2:90237410-90237429 | None:intergenic | 25.0% |
| !!! | CATTTTGATTCTTGAATGTA+AGG | - | chr4.2:90237157-90237176 | MS.gene61162:intron | 25.0% |
| !!! | TAGGTTGATACATATAAACT+TGG | - | chr4.2:90240435-90240454 | MS.gene61162:intron | 25.0% |
| !!! | TGTTTGTTGATTTAACAGAT+GGG | - | chr4.2:90237782-90237801 | MS.gene61162:CDS | 25.0% |
| !!! | TTATAGATTAAGAGAGTATC+AGG | - | chr4.2:90238710-90238729 | MS.gene61162:intron | 25.0% |
| !!! | TTGTTTGTTGATTTAACAGA+TGG | - | chr4.2:90237781-90237800 | MS.gene61162:CDS | 25.0% |
| !!! | TTTTGATTCTTGAATGTAAG+GGG | - | chr4.2:90237159-90237178 | MS.gene61162:intron | 25.0% |
| AAATTACATACGCATCTTCA+AGG | + | chr4.2:90237486-90237505 | None:intergenic | 30.0% | |
| AAATTGGTTACACCAAAAGT+TGG | + | chr4.2:90240274-90240293 | None:intergenic | 30.0% | |
| AAGCAAAAACTCATCTTTCT+TGG | + | chr4.2:90239938-90239957 | None:intergenic | 30.0% | |
| AATAACAAGGTATACTAGCA+AGG | - | chr4.2:90239822-90239841 | MS.gene61162:intron | 30.0% | |
| AATTACATACGCATCTTCAA+GGG | + | chr4.2:90237485-90237504 | None:intergenic | 30.0% | |
| ACACTAACAAAACACATTTG+AGG | + | chr4.2:90237246-90237265 | None:intergenic | 30.0% | |
| AGGATGACAAAAAGCAAAAA+AGG | + | chr4.2:90238993-90239012 | None:intergenic | 30.0% | |
| ATAGTCCTGAATGTATCAAT+TGG | + | chr4.2:90237675-90237694 | None:intergenic | 30.0% | |
| ATATGACCATTGTAGGAAAT+GGG | - | chr4.2:90238275-90238294 | MS.gene61162:CDS | 30.0% | |
| ATGTTTCATTTGAGTAAACG+AGG | - | chr4.2:90238059-90238078 | MS.gene61162:CDS | 30.0% | |
| ATTATAGGCAATGTTTCTTC+TGG | - | chr4.2:90239391-90239410 | MS.gene61162:intron | 30.0% | |
| CACTCCAATGAAAACAAAAA+TGG | + | chr4.2:90237131-90237150 | None:intergenic | 30.0% | |
| CTCAAATGAAACATCAATTC+AGG | + | chr4.2:90238053-90238072 | None:intergenic | 30.0% | |
| CTCTAATGGTTGAAGAAAAT+AGG | - | chr4.2:90240662-90240681 | MS.gene61162:CDS | 30.0% | |
| CTTTACGACAAAAACAAACA+TGG | + | chr4.2:90237058-90237077 | None:intergenic | 30.0% | |
| GACTACTGAAAGACAAATTT+AGG | + | chr4.2:90237215-90237234 | None:intergenic | 30.0% | |
| GATAAATCAGCTAAACCAAT+TGG | - | chr4.2:90236833-90236852 | MS.gene61162:CDS | 30.0% | |
| GATATTGTTTAGCATAACCT+GGG | - | chr4.2:90240077-90240096 | MS.gene61162:intron | 30.0% | |
| GGAAAAAGAAAGTAGATTGT+TGG | - | chr4.2:90240683-90240702 | MS.gene61162:CDS | 30.0% | |
| GTAATCCAATTGATACATTC+AGG | - | chr4.2:90237667-90237686 | MS.gene61162:CDS | 30.0% | |
| GTCTTAATAGAGGGTAAAAT+TGG | + | chr4.2:90240290-90240309 | None:intergenic | 30.0% | |
| GTGTCTATTGTTAGTTAGTT+CGG | - | chr4.2:90237446-90237465 | MS.gene61162:intron | 30.0% | |
| TAACATCAACAACATTTCTG+AGG | + | chr4.2:90239013-90239032 | None:intergenic | 30.0% | |
| TATAAGCTATAGTTGACAGA+AGG | + | chr4.2:90239576-90239595 | None:intergenic | 30.0% | |
| TCAACTATAGCTTATAAGCT+TGG | - | chr4.2:90239580-90239599 | MS.gene61162:CDS | 30.0% | |
| TTAAGCTTGTAATCCAAACA+AGG | + | chr4.2:90240103-90240122 | None:intergenic | 30.0% | |
| TTACGACAAAAACAAACATG+GGG | + | chr4.2:90237056-90237075 | None:intergenic | 30.0% | |
| TTTAAAGAAACACATTGACG+TGG | - | chr4.2:90238587-90238606 | MS.gene61162:intron | 30.0% | |
| TTTAGGCATGTTTACATTCA+TGG | + | chr4.2:90237198-90237217 | None:intergenic | 30.0% | |
| ! | AGAAAGATGAGTTTTTGCTT+AGG | - | chr4.2:90239938-90239957 | MS.gene61162:intron | 30.0% |
| ! | ATTTTAGGCAAAATTTCAGC+TGG | + | chr4.2:90239355-90239374 | None:intergenic | 30.0% |
| ! | CTATTTTCTTCAACCATTAG+AGG | + | chr4.2:90240664-90240683 | None:intergenic | 30.0% |
| ! | GAAAGATGAGTTTTTGCTTA+GGG | - | chr4.2:90239939-90239958 | MS.gene61162:intron | 30.0% |
| ! | TCGAAAGAAGATGTTTTCAT+TGG | - | chr4.2:90236767-90236786 | MS.gene61162:CDS | 30.0% |
| ! | TTTTAGGCAAAATTTCAGCT+GGG | + | chr4.2:90239354-90239373 | None:intergenic | 30.0% |
| !! | ATGAACTCATCGTTTTAATG+TGG | - | chr4.2:90238838-90238857 | MS.gene61162:intron | 30.0% |
| !!! | AATTCTGTTTTTGAGGGATA+AGG | - | chr4.2:90238865-90238884 | MS.gene61162:intron | 30.0% |
| !!! | CACTCCATTTTTGTTTTCAT+TGG | - | chr4.2:90237124-90237143 | MS.gene61162:intron | 30.0% |
| !!! | CTTATGGATTTTGTTTTCGT+TGG | - | chr4.2:90237286-90237305 | MS.gene61162:intron | 30.0% |
| !!! | TTATTTTTGAAACAGGAGAC+TGG | - | chr4.2:90239033-90239052 | MS.gene61162:intron | 30.0% |
| AAAACATATGCTCTCAAGCA+CGG | + | chr4.2:90239863-90239882 | None:intergenic | 35.0% | |
| AAAGAGAGACTACTCTTGTT+TGG | - | chr4.2:90237928-90237947 | MS.gene61162:CDS | 35.0% | |
| AAGAGTAGTCTCTCTTTGAT+TGG | + | chr4.2:90237925-90237944 | None:intergenic | 35.0% | |
| ACTAACAATAGACACATTCG+AGG | + | chr4.2:90237441-90237460 | None:intergenic | 35.0% | |
| AGCAAGAAATCCAATCTGAA+GGG | - | chr4.2:90238447-90238466 | MS.gene61162:CDS | 35.0% | |
| ATGTTTAGGTGATCAACATG+CGG | - | chr4.2:90239444-90239463 | MS.gene61162:intron | 35.0% | |
| ATTCATAATTACCCTGCTTG+TGG | + | chr4.2:90236890-90236909 | None:intergenic | 35.0% | |
| CAACTGCAGTGTTTAAACAT+CGG | + | chr4.2:90237538-90237557 | None:intergenic | 35.0% | |
| CAATAGACACTTGGTTGATT+TGG | - | chr4.2:90239206-90239225 | MS.gene61162:intron | 35.0% | |
| CATATGACCATTGTAGGAAA+TGG | - | chr4.2:90238274-90238293 | MS.gene61162:CDS | 35.0% | |
| CATGTACATATGACCATTGT+AGG | - | chr4.2:90238268-90238287 | MS.gene61162:CDS | 35.0% | |
| CGATATTGTTTAGCATAACC+TGG | - | chr4.2:90240076-90240095 | MS.gene61162:intron | 35.0% | |
| CTCTTTGATTGGGTAAAGAA+GGG | + | chr4.2:90240332-90240351 | None:intergenic | 35.0% | |
| GACAAAGGATTGAAAGCTAT+TGG | - | chr4.2:90237894-90237913 | MS.gene61162:CDS | 35.0% | |
| GATTATGTTGCTAGCAATGA+TGG | + | chr4.2:90238482-90238501 | None:intergenic | 35.0% | |
| GATTCAATGCACAAAGATTC+TGG | - | chr4.2:90239901-90239920 | MS.gene61162:intron | 35.0% | |
| GCACTGAAATATGTGCTAAT+AGG | + | chr4.2:90239109-90239128 | None:intergenic | 35.0% | |
| GCTTTCATTCTACTGAATAC+CGG | - | chr4.2:90239523-90239542 | MS.gene61162:CDS | 35.0% | |
| GGAGTAGTTAAATCAAACCA+TGG | - | chr4.2:90239550-90239569 | MS.gene61162:CDS | 35.0% | |
| GGATTTGTATCGGAATAACA+AGG | - | chr4.2:90239809-90239828 | MS.gene61162:intron | 35.0% | |
| GTAAACGAGGACAATTCATT+TGG | - | chr4.2:90238072-90238091 | MS.gene61162:CDS | 35.0% | |
| GTATGTAGATAAGCTCACAA+AGG | - | chr4.2:90240165-90240184 | MS.gene61162:intron | 35.0% | |
| GTTAGTTCCATGGTTGAAAT+TGG | - | chr4.2:90238953-90238972 | MS.gene61162:intron | 35.0% | |
| TAACATCAAAAGCTTAGCTC+TGG | + | chr4.2:90238937-90238956 | None:intergenic | 35.0% | |
| TACGACAAAAACAAACATGG+GGG | + | chr4.2:90237055-90237074 | None:intergenic | 35.0% | |
| TAGTGTAAAAGAGACACTTG+AGG | - | chr4.2:90237260-90237279 | MS.gene61162:intron | 35.0% | |
| TAGTTCACCAATTTCAACCA+TGG | + | chr4.2:90238963-90238982 | None:intergenic | 35.0% | |
| TCAACTTGATGAGATCCAAT+TGG | + | chr4.2:90236851-90236870 | None:intergenic | 35.0% | |
| TCTCTTTGATTGGGTAAAGA+AGG | + | chr4.2:90240333-90240352 | None:intergenic | 35.0% | |
| TCTTAATCTATAAGGCACGT+TGG | + | chr4.2:90238703-90238722 | None:intergenic | 35.0% | |
| TTAGGTTCATCAGCATTGTT+CGG | + | chr4.2:90239288-90239307 | None:intergenic | 35.0% | |
| TTTCTTCAACCATTAGAGGA+CGG | + | chr4.2:90240660-90240679 | None:intergenic | 35.0% | |
| ! | AGCTTTTGATGTTAGTTCCA+TGG | - | chr4.2:90238943-90238962 | MS.gene61162:intron | 35.0% |
| ! | AGTTGGTATTCCCTTGATAT+TGG | + | chr4.2:90240257-90240276 | None:intergenic | 35.0% |
| ! | ATCAAGGGAATACCAACTTT+TGG | - | chr4.2:90240259-90240278 | MS.gene61162:intron | 35.0% |
| ! | ATGCTTAATCTAGGACCAAT+TGG | - | chr4.2:90238675-90238694 | MS.gene61162:intron | 35.0% |
| ! | TGCTTAATCTAGGACCAATT+GGG | - | chr4.2:90238676-90238695 | MS.gene61162:intron | 35.0% |
| ! | TGTTTGGAACAATAGACACT+TGG | - | chr4.2:90239197-90239216 | MS.gene61162:intron | 35.0% |
| ! | TTTGAAACTTCTGTGGTTGA+TGG | - | chr4.2:90239129-90239148 | MS.gene61162:intron | 35.0% |
| !! | AACTCATCGTTTTAATGTGG+TGG | - | chr4.2:90238841-90238860 | MS.gene61162:intron | 35.0% |
| !! | AGATTTCGTTTTCGATTCGA+AGG | - | chr4.2:90240609-90240628 | MS.gene61162:intron | 35.0% |
| !! | GATTGCAAATTTTGATGGGT+TGG | - | chr4.2:90237089-90237108 | MS.gene61162:intron | 35.0% |
| !! | GCTAAAAGTACTTATGGTAC+AGG | - | chr4.2:90239499-90239518 | MS.gene61162:CDS | 35.0% |
| !! | TGGTTGATTTGGAACTTAAC+CGG | - | chr4.2:90239217-90239236 | MS.gene61162:intron | 35.0% |
| !! | TTGTTGATTTAACAGATGGG+TGG | - | chr4.2:90237785-90237804 | MS.gene61162:CDS | 35.0% |
| !! | TTTTGATTCTTGAATGCGTG+AGG | - | chr4.2:90237321-90237340 | MS.gene61162:intron | 35.0% |
| !!! | ATCTTCAAGGGTGTCTTTTA+TGG | + | chr4.2:90237473-90237492 | None:intergenic | 35.0% |
| !!! | GGTGGTAATTCTGTTTTTGA+GGG | - | chr4.2:90238859-90238878 | MS.gene61162:intron | 35.0% |
| !!! | TGGTGGTAATTCTGTTTTTG+AGG | - | chr4.2:90238858-90238877 | MS.gene61162:intron | 35.0% |
| !!! | TTTTGATGGGTTGGTAAGTA+TGG | - | chr4.2:90237098-90237117 | MS.gene61162:intron | 35.0% |
| !!! | TTTTGTTGATAATGTTGGGC+AGG | - | chr4.2:90240486-90240505 | MS.gene61162:intron | 35.0% |
| AACGAAGTAAACACCACCAT+TGG | + | chr4.2:90239740-90239759 | None:intergenic | 40.0% | |
| AACGACTCTGTACTGAATGT+TGG | + | chr4.2:90238311-90238330 | None:intergenic | 40.0% | |
| AAGTATCTGTGCTACATAGC+TGG | - | chr4.2:90238218-90238237 | MS.gene61162:CDS | 40.0% | |
| AATCCAATCTGAAGGGAATC+TGG | - | chr4.2:90238454-90238473 | MS.gene61162:intron | 40.0% | |
| ACACTCTCCAATATCTCCAT+TGG | + | chr4.2:90237819-90237838 | None:intergenic | 40.0% | |
| ACCAACCAATCTCAAATCGA+TGG | + | chr4.2:90237568-90237587 | None:intergenic | 40.0% | |
| ACGACAAAAACAAACATGGG+GGG | + | chr4.2:90237054-90237073 | None:intergenic | 40.0% | |
| AGACTGGAAAAGGAGTTATC+TGG | - | chr4.2:90239049-90239068 | MS.gene61162:intron | 40.0% | |
| AGATCCTTCGAGTGCATAAT+TGG | + | chr4.2:90239620-90239639 | None:intergenic | 40.0% | |
| AGTATCTGTGCTACATAGCT+GGG | - | chr4.2:90238219-90238238 | MS.gene61162:CDS | 40.0% | |
| ATCCAATCTGAAGGGAATCT+GGG | - | chr4.2:90238455-90238474 | MS.gene61162:intron | 40.0% | |
| ATCGTCTGATCTCTATCCAA+TGG | - | chr4.2:90238400-90238419 | MS.gene61162:CDS | 40.0% | |
| CAGCAAGAAATCCAATCTGA+AGG | - | chr4.2:90238446-90238465 | MS.gene61162:CDS | 40.0% | |
| CATTGACGTGGTGAAAAAGA+AGG | - | chr4.2:90238599-90238618 | MS.gene61162:intron | 40.0% | |
| CCAACCAATCTCAAATCGAT+GGG | + | chr4.2:90237567-90237586 | None:intergenic | 40.0% | |
| CTCGATCTTGAATCAATGGT+CGG | + | chr4.2:90237616-90237635 | None:intergenic | 40.0% | |
| CTCTTCACAATGCTCTTGTT+TGG | - | chr4.2:90237970-90237989 | MS.gene61162:CDS | 40.0% | |
| CTTTGCCCATTCTCTATGTT+TGG | - | chr4.2:90238518-90238537 | MS.gene61162:intron | 40.0% | |
| GAACCTAAAAACCCTCAACT+GGG | - | chr4.2:90239300-90239319 | MS.gene61162:intron | 40.0% | |
| GACATTGAAACAACAGCACT+TGG | - | chr4.2:90240544-90240563 | MS.gene61162:intron | 40.0% | |
| GCAGACAAGTACTAACATGT+CGG | + | chr4.2:90240391-90240410 | None:intergenic | 40.0% | |
| GCATGATCCAATGGAGATAT+TGG | - | chr4.2:90237809-90237828 | MS.gene61162:CDS | 40.0% | |
| GCATTAGAGGTAGAATCCAA+TGG | - | chr4.2:90239721-90239740 | MS.gene61162:intron | 40.0% | |
| GCGGTTGAAATCAATATCAG+TGG | - | chr4.2:90237635-90237654 | MS.gene61162:CDS | 40.0% | |
| TAGGCAATGTTTCTTCTGGA+TGG | - | chr4.2:90239395-90239414 | MS.gene61162:intron | 40.0% | |
| TAGGTTCATCAGCATTGTTC+GGG | + | chr4.2:90239287-90239306 | None:intergenic | 40.0% | |
| TATCCACATGTGTCAAACAC+CGG | - | chr4.2:90238179-90238198 | MS.gene61162:CDS | 40.0% | |
| TCGATCTTGAATCAATGGTC+GGG | + | chr4.2:90237615-90237634 | None:intergenic | 40.0% | |
| TGAACCTAAAAACCCTCAAC+TGG | - | chr4.2:90239299-90239318 | MS.gene61162:intron | 40.0% | |
| TGATTTAACTACTCCTTCGC+CGG | + | chr4.2:90239545-90239564 | None:intergenic | 40.0% | |
| TGCTAAAGATATAGAGGCTC+TGG | - | chr4.2:90239699-90239718 | MS.gene61162:intron | 40.0% | |
| TGTAAAAGAGACACTTGAGG+AGG | - | chr4.2:90237263-90237282 | MS.gene61162:intron | 40.0% | |
| TGTGAAGGTTTGCATTACCA+AGG | - | chr4.2:90237836-90237855 | MS.gene61162:CDS | 40.0% | |
| TTAGAGGTAGAATCCAATGG+TGG | - | chr4.2:90239724-90239743 | MS.gene61162:intron | 40.0% | |
| TTCATTGGTGCAATTGACCA+AGG | - | chr4.2:90236782-90236801 | MS.gene61162:CDS | 40.0% | |
| TTGAAACAGGAGACTGGAAA+AGG | - | chr4.2:90239039-90239058 | MS.gene61162:intron | 40.0% | |
| ! | AACATCGGATCTTTTACAGC+AGG | + | chr4.2:90237523-90237542 | None:intergenic | 40.0% |
| ! | ACACATTTTGTAGAGAGCTG+TGG | - | chr4.2:90239079-90239098 | MS.gene61162:intron | 40.0% |
| ! | ACATCGGATCTTTTACAGCA+GGG | + | chr4.2:90237522-90237541 | None:intergenic | 40.0% |
| ! | GAGTTTTTGCTTAGGGTTGA+TGG | - | chr4.2:90239946-90239965 | MS.gene61162:intron | 40.0% |
| ! | GATGGATTCAATGTGGACAA+AGG | - | chr4.2:90237879-90237898 | MS.gene61162:CDS | 40.0% |
| ! | GCATAATTGGTTGGAGCATT+CGG | + | chr4.2:90239607-90239626 | None:intergenic | 40.0% |
| ! | TACTTTTAGCCTCCCCTTTA+CGG | + | chr4.2:90239489-90239508 | None:intergenic | 40.0% |
| ! | TAGTGTTTTCCGTCCTCTAA+TGG | - | chr4.2:90240648-90240667 | MS.gene61162:CDS | 40.0% |
| ! | TCACAATGCTCTTGTTTGGA+TGG | - | chr4.2:90237974-90237993 | MS.gene61162:CDS | 40.0% |
| ! | TGGGATTTGAAGTGCTTTCA+AGG | + | chr4.2:90239335-90239354 | None:intergenic | 40.0% |
| !! | AACAGCTGATGGATTCAATG+TGG | - | chr4.2:90237872-90237891 | MS.gene61162:CDS | 40.0% |
| !! | ACCATTGATTCAAGATCGAG+CGG | - | chr4.2:90237616-90237635 | MS.gene61162:CDS | 40.0% |
| !! | ATTAAGAGAGTATCAGGCCA+AGG | - | chr4.2:90238716-90238735 | MS.gene61162:intron | 40.0% |
| !! | CAAACAAGAGCATTGTGAAG+AGG | + | chr4.2:90237972-90237991 | None:intergenic | 40.0% |
| !! | TCAGTGCTTTGAAACTTCTG+TGG | - | chr4.2:90239122-90239141 | MS.gene61162:intron | 40.0% |
| !! | TCTGTGGTTGATGGAAAATG+TGG | - | chr4.2:90239138-90239157 | MS.gene61162:intron | 40.0% |
| !! | TTCACCCATCGATTTGAGAT+TGG | - | chr4.2:90237560-90237579 | MS.gene61162:CDS | 40.0% |
| !! | TTGATTTGGAACTTAACCGG+TGG | - | chr4.2:90239220-90239239 | MS.gene61162:intron | 40.0% |
| !!! | TTTTTGCTTAGGGTTGATGG+TGG | - | chr4.2:90239949-90239968 | MS.gene61162:intron | 40.0% |
| AAAAGAGGACCTGCAAACAG+AGG | + | chr4.2:90238012-90238031 | None:intergenic | 45.0% | |
| AAACCTGAGTCTGCATCAAG+AGG | + | chr4.2:90239990-90240009 | None:intergenic | 45.0% | |
| AACTTAACCGGTGGAGTGAA+AGG | - | chr4.2:90239229-90239248 | MS.gene61162:intron | 45.0% | |
| ACCGCTCGATCTTGAATCAA+TGG | + | chr4.2:90237620-90237639 | None:intergenic | 45.0% | |
| ACTCAGTTCTATCCACAAGC+AGG | - | chr4.2:90236875-90236894 | MS.gene61162:CDS | 45.0% | |
| AGGTAGATTCATCCCAGTTG+AGG | + | chr4.2:90239315-90239334 | None:intergenic | 45.0% | |
| AGTCAGCGTTTCTAAGCCAT+TGG | + | chr4.2:90238419-90238438 | None:intergenic | 45.0% | |
| ATCCCAATCGCTGGATGTTT+AGG | - | chr4.2:90239430-90239449 | MS.gene61162:intron | 45.0% | |
| ATCTGCTACTGCTTGTTCCT+TGG | + | chr4.2:90236802-90236821 | None:intergenic | 45.0% | |
| ATTCTACTGAATACCGGCGA+AGG | - | chr4.2:90239529-90239548 | MS.gene61162:CDS | 45.0% | |
| CACCTAAACATCCAGCGATT+GGG | + | chr4.2:90239435-90239454 | None:intergenic | 45.0% | |
| CATTACCAAGGCAGTGGATA+AGG | - | chr4.2:90237848-90237867 | MS.gene61162:CDS | 45.0% | |
| CCAAATCCCAACAGCTAATC+CGG | + | chr4.2:90240584-90240603 | None:intergenic | 45.0% | |
| CCAACCAATTATGCACTCGA+AGG | - | chr4.2:90239613-90239632 | MS.gene61162:CDS | 45.0% | |
| CCTTCGAGTGCATAATTGGT+TGG | + | chr4.2:90239616-90239635 | None:intergenic | 45.0% | |
| CGAGGACAATTCATTTGGCT+AGG | - | chr4.2:90238077-90238096 | MS.gene61162:CDS | 45.0% | |
| CTATAGTTGACAGAAGGCCA+TGG | + | chr4.2:90239570-90239589 | None:intergenic | 45.0% | |
| CTCAGTTCTATCCACAAGCA+GGG | - | chr4.2:90236876-90236895 | MS.gene61162:CDS | 45.0% | |
| CTGGAAAAGGAGTTATCTGG+TGG | - | chr4.2:90239052-90239071 | MS.gene61162:intron | 45.0% | |
| GAGGAACCCATTTCCTACAA+TGG | + | chr4.2:90238284-90238303 | None:intergenic | 45.0% | |
| GATGCTCGTGGGATTTGTAT+CGG | - | chr4.2:90239799-90239818 | MS.gene61162:intron | 45.0% | |
| GGAAAATGTGGATGCTGTCA+AGG | - | chr4.2:90239150-90239169 | MS.gene61162:intron | 45.0% | |
| GGTAGATTCATCCCAGTTGA+GGG | + | chr4.2:90239314-90239333 | None:intergenic | 45.0% | |
| TACTTCGTTCCTGCCTTCAA+CGG | - | chr4.2:90239751-90239770 | MS.gene61162:intron | 45.0% | |
| TATCCGGTGTTTGACACATG+TGG | + | chr4.2:90238185-90238204 | None:intergenic | 45.0% | |
| TCACCTAAACATCCAGCGAT+TGG | + | chr4.2:90239436-90239455 | None:intergenic | 45.0% | |
| TCTTGATGCAGACTCAGGTT+TGG | - | chr4.2:90239989-90240008 | MS.gene61162:intron | 45.0% | |
| TTCGTACTACCTCTGTTTGC+AGG | - | chr4.2:90238000-90238019 | MS.gene61162:CDS | 45.0% | |
| TTGTAATCCAAACAAGGCCC+AGG | + | chr4.2:90240097-90240116 | None:intergenic | 45.0% | |
| ! | CATCCCAGTTGAGGGTTTTT+AGG | + | chr4.2:90239306-90239325 | None:intergenic | 45.0% |
| ! | CTTGTTTGGAGCAAATCCAC+TGG | - | chr4.2:90237942-90237961 | MS.gene61162:CDS | 45.0% |
| ! | GAAGGATCTGTTGCTATTGC+TGG | - | chr4.2:90239631-90239650 | MS.gene61162:CDS | 45.0% |
| ! | GGAGATATTGGAGAGTGTGA+AGG | - | chr4.2:90237821-90237840 | MS.gene61162:CDS | 45.0% |
| ! | TATAGAGGCTCTGGCATTAG+AGG | - | chr4.2:90239708-90239727 | MS.gene61162:intron | 45.0% |
| !! | CCCATCGATTTGAGATTGGT+TGG | - | chr4.2:90237564-90237583 | MS.gene61162:CDS | 45.0% |
| !! | GCTGTTGTTTCAATGTCAGC+TGG | + | chr4.2:90240541-90240560 | None:intergenic | 45.0% |
| !! | GGGGAGGCTAAAAGTACTTA+TGG | - | chr4.2:90239493-90239512 | MS.gene61162:intron | 45.0% |
| !! | TCTTTTACAGCAGGGCATCT+AGG | + | chr4.2:90237514-90237533 | None:intergenic | 45.0% |
| !! | TGTTGATAATGTTGGGCAGG+CGG | - | chr4.2:90240489-90240508 | MS.gene61162:intron | 45.0% |
| !!! | TCATAATTTTTTTTTTTTAT+AGG | - | chr4.2:90238651-90238670 | MS.gene61162:intron | 5.0% |
| AACAGCTAATCCGGCTGCAT+AGG | + | chr4.2:90240575-90240594 | None:intergenic | 50.0% | |
| ATGGGTGGAGCATGATCCAA+TGG | - | chr4.2:90237800-90237819 | MS.gene61162:CDS | 50.0% | |
| CAACCTCTTGATGCAGACTC+AGG | - | chr4.2:90239984-90240003 | MS.gene61162:intron | 50.0% | |
| CAATCCTCCTTTCACTCCAC+CGG | + | chr4.2:90239239-90239258 | None:intergenic | 50.0% | |
| CAGTGGCTTAGAGATGGTCT+TGG | - | chr4.2:90239664-90239683 | MS.gene61162:CDS | 50.0% | |
| CGGAGCAAACAATCCGTTGA+AGG | + | chr4.2:90239767-90239786 | None:intergenic | 50.0% | |
| GACCCAGATTCCCTTCAGAT+TGG | + | chr4.2:90238460-90238479 | None:intergenic | 50.0% | |
| GAGACACTTGAGGAGGCTTA+TGG | - | chr4.2:90237270-90237289 | MS.gene61162:intron | 50.0% | |
| GATCAACATGCGGCAATGCT+TGG | - | chr4.2:90239454-90239473 | MS.gene61162:intron | 50.0% | |
| GCAAACAATCCGTTGAAGGC+AGG | + | chr4.2:90239763-90239782 | None:intergenic | 50.0% | |
| GGTTTGCATTACCAAGGCAG+TGG | - | chr4.2:90237842-90237861 | MS.gene61162:CDS | 50.0% | |
| GTGGATAAGGCAACAGCTGA+TGG | - | chr4.2:90237861-90237880 | MS.gene61162:CDS | 50.0% | |
| TAAGGCACGTTGGACCCAAT+TGG | + | chr4.2:90238693-90238712 | None:intergenic | 50.0% | |
| TGTACTGAATGTTGGCCACG+AGG | + | chr4.2:90238303-90238322 | None:intergenic | 50.0% | |
| TGTTGCCTTATCCACTGCCT+TGG | + | chr4.2:90237856-90237875 | None:intergenic | 50.0% | |
| TTAACCGGTGGAGTGAAAGG+AGG | - | chr4.2:90239232-90239251 | MS.gene61162:intron | 50.0% | |
| TTGGACAAGCGTGCCGTAAA+GGG | - | chr4.2:90239473-90239492 | MS.gene61162:intron | 50.0% | |
| ! | TGTAGGAAATGGGTTCCTCG+TGG | - | chr4.2:90238285-90238304 | MS.gene61162:CDS | 50.0% |
| ! | TGTTGCTATTGCTGGAGCTG+CGG | - | chr4.2:90239639-90239658 | MS.gene61162:CDS | 50.0% |
| !! | AGCATAACCTGGGCCTTGTT+TGG | - | chr4.2:90240087-90240106 | MS.gene61162:intron | 50.0% |
| !! | ATGCAGCCGGATTAGCTGTT+GGG | - | chr4.2:90240575-90240594 | MS.gene61162:intron | 50.0% |
| !! | ATTGTGAAGAGGAGCACCAG+TGG | + | chr4.2:90237961-90237980 | None:intergenic | 50.0% |
| !! | CCGGATTAGCTGTTGGGATT+TGG | - | chr4.2:90240581-90240600 | MS.gene61162:intron | 50.0% |
| !! | TATGCAGCCGGATTAGCTGT+TGG | - | chr4.2:90240574-90240593 | MS.gene61162:intron | 50.0% |
| !! | TCAACGGATTGTTTGCTCCG+TGG | - | chr4.2:90239767-90239786 | MS.gene61162:intron | 50.0% |
| CTTGGACAAGCGTGCCGTAA+AGG | - | chr4.2:90239472-90239491 | MS.gene61162:intron | 55.0% | |
| GCGATTGGGATACCAGCAAC+TGG | + | chr4.2:90239421-90239440 | None:intergenic | 55.0% | |
| GTTGCTGGTATCCCAATCGC+TGG | - | chr4.2:90239421-90239440 | MS.gene61162:intron | 55.0% | |
| TCTTCTGGATGGCCAGTTGC+TGG | - | chr4.2:90239406-90239425 | MS.gene61162:intron | 55.0% | |
| TGGACAAGCGTGCCGTAAAG+GGG | - | chr4.2:90239474-90239493 | MS.gene61162:intron | 55.0% | |
| ! | ACGGATTGTTTGCTCCGTGG+TGG | - | chr4.2:90239770-90239789 | MS.gene61162:intron | 55.0% |
| ! | TGTTGGGCAGGCGGATTTGT+TGG | - | chr4.2:90240498-90240517 | MS.gene61162:intron | 55.0% |
| ACAAGCGTGCCGTAAAGGGG+AGG | - | chr4.2:90239477-90239496 | MS.gene61162:intron | 60.0% | |
| CGAGCATCATCACGCCACCA+CGG | + | chr4.2:90239787-90239806 | None:intergenic | 60.0% | |
| CTTGGAGCAGCCTATGCAGC+CGG | - | chr4.2:90240562-90240581 | MS.gene61162:intron | 60.0% | |
| GCGGTGCAGTGGCTTAGAGA+TGG | - | chr4.2:90239658-90239677 | MS.gene61162:CDS | 60.0% | |
| ! | GGTGGCGTGATGATGCTCGT+GGG | - | chr4.2:90239788-90239807 | MS.gene61162:intron | 60.0% |
| ! | TGGTGGCGTGATGATGCTCG+TGG | - | chr4.2:90239787-90239806 | MS.gene61162:intron | 60.0% |
| TTGCTGGAGCTGCGGTGCAG+TGG | - | chr4.2:90239647-90239666 | MS.gene61162:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 90236764 | 90240753 | 90236764 | ID=MS.gene61162 |
| chr4.2 | mRNA | 90236764 | 90240753 | 90236764 | ID=MS.gene61162.t1;Parent=MS.gene61162 |
| chr4.2 | exon | 90240620 | 90240753 | 90240620 | ID=MS.gene61162.t1.exon1;Parent=MS.gene61162.t1 |
| chr4.2 | CDS | 90240620 | 90240753 | 90240620 | ID=cds.MS.gene61162.t1;Parent=MS.gene61162.t1 |
| chr4.2 | exon | 90239496 | 90239717 | 90239496 | ID=MS.gene61162.t1.exon2;Parent=MS.gene61162.t1 |
| chr4.2 | CDS | 90239496 | 90239717 | 90239496 | ID=cds.MS.gene61162.t1;Parent=MS.gene61162.t1 |
| chr4.2 | exon | 90237512 | 90238469 | 90237512 | ID=MS.gene61162.t1.exon3;Parent=MS.gene61162.t1 |
| chr4.2 | CDS | 90237512 | 90238469 | 90237512 | ID=cds.MS.gene61162.t1;Parent=MS.gene61162.t1 |
| chr4.2 | exon | 90236764 | 90237009 | 90236764 | ID=MS.gene61162.t1.exon4;Parent=MS.gene61162.t1 |
| chr4.2 | CDS | 90236764 | 90237009 | 90236764 | ID=cds.MS.gene61162.t1;Parent=MS.gene61162.t1 |
| Gene Sequence |
| Protein sequence |
