Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62751.t1 | RHN38559.1 | 80.3 | 706 | 20 | 1 | 1 | 587 | 32 | 737 | 0.00E+00 | 1100.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62751.t1 | Q9FGU3 | 41.9 | 716 | 284 | 9 | 2 | 587 | 28 | 741 | 1.9e-149 | 530.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62751.t1 | A0A396G9P4 | 80.3 | 706 | 20 | 1 | 1 | 587 | 32 | 737 | 0.0e+00 | 1100.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene62751 | 0.804797 | 1.82E-49 | -1.69E-46 |
| MS.gene049171 | MS.gene62751 | 0.840281 | 9.56E-58 | -1.69E-46 |
| MS.gene049217 | MS.gene62751 | 0.828814 | 7.29E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene62751 | 0.828721 | 7.68E-55 | -1.69E-46 |
| MS.gene049285 | MS.gene62751 | 0.806784 | 6.95E-50 | -1.69E-46 |
| MS.gene049320 | MS.gene62751 | 0.800522 | 1.39E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene62751 | 0.820984 | 5.14E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene62751 | 0.838143 | 3.43E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene62751 | 0.803603 | 3.22E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene62751 | 0.834044 | 3.76E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene62751 | 0.8043 | 2.31E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene62751 | 0.806209 | 9.19E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene62751 | 0.824692 | 7.03E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene62751 | 0.812006 | 5.27E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene62751 | 0.803458 | 3.45E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene62751 | 0.815531 | 8.81E-52 | -1.69E-46 |
| MS.gene05080 | MS.gene62751 | 0.8444 | 7.74E-59 | -1.69E-46 |
| MS.gene05081 | MS.gene62751 | 0.801846 | 7.42E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene62751 | 0.815394 | 9.45E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene62751 | 0.811522 | 6.71E-51 | -1.69E-46 |
| MS.gene050950 | MS.gene62751 | 0.801994 | 6.92E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene62751 | 0.816247 | 6.10E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene62751 | 0.814104 | 1.83E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene62751 | 0.845045 | 5.19E-59 | -1.69E-46 |
| MS.gene051858 | MS.gene62751 | 0.810779 | 9.73E-51 | -1.69E-46 |
| MS.gene051874 | MS.gene62751 | 0.803224 | 3.86E-49 | -1.69E-46 |
| MS.gene051949 | MS.gene62751 | 0.807489 | 4.93E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene62751 | 0.823355 | 1.45E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene62751 | 0.810005 | 1.43E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene62751 | 0.808394 | 3.17E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene62751 | 0.812844 | 3.46E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene62751 | 0.805869 | 1.08E-49 | -1.69E-46 |
| MS.gene052823 | MS.gene62751 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene052825 | MS.gene62751 | 0.804762 | 1.85E-49 | -1.69E-46 |
| MS.gene052870 | MS.gene62751 | 0.840798 | 7.00E-58 | -1.69E-46 |
| MS.gene052872 | MS.gene62751 | 0.855859 | 4.76E-62 | -1.69E-46 |
| MS.gene053203 | MS.gene62751 | 0.824377 | 8.34E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene62751 | 0.844744 | 6.26E-59 | -1.69E-46 |
| MS.gene053824 | MS.gene62751 | 0.830216 | 3.33E-55 | -1.69E-46 |
| MS.gene053916 | MS.gene62751 | 0.806601 | 7.60E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene62751 | 0.806612 | 7.56E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene62751 | 0.81672 | 4.78E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene62751 | -0.82629 | 2.94E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene62751 | 0.804895 | 1.73E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene62751 | 0.828838 | 7.20E-55 | -1.69E-46 |
| MS.gene055502 | MS.gene62751 | 0.824376 | 8.35E-54 | -1.69E-46 |
| MS.gene055577 | MS.gene62751 | 0.858239 | 9.44E-63 | -1.69E-46 |
| MS.gene055722 | MS.gene62751 | 0.807703 | 4.44E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene62751 | 0.816496 | 5.37E-52 | -1.69E-46 |
| MS.gene055751 | MS.gene62751 | 0.809185 | 2.14E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene62751 | 0.804904 | 1.73E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene62751 | 0.813267 | 2.79E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene62751 | 0.800496 | 1.40E-48 | -1.69E-46 |
| MS.gene056510 | MS.gene62751 | 0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene62751 | 0.800126 | 1.67E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene62751 | 0.8226 | 2.17E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene62751 | 0.829549 | 4.84E-55 | -1.69E-46 |
| MS.gene057831 | MS.gene62751 | 0.804027 | 2.63E-49 | -1.69E-46 |
| MS.gene057857 | MS.gene62751 | 0.809752 | 1.62E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene62751 | 0.807697 | 4.45E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene62751 | 0.82203 | 2.95E-53 | -1.69E-46 |
| MS.gene058723 | MS.gene62751 | 0.841551 | 4.44E-58 | -1.69E-46 |
| MS.gene058773 | MS.gene62751 | 0.803444 | 3.48E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene62751 | 0.838987 | 2.07E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene62751 | 0.844432 | 7.59E-59 | -1.69E-46 |
| MS.gene05914 | MS.gene62751 | 0.829819 | 4.16E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene62751 | 0.830602 | 2.68E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene62751 | 0.821316 | 4.31E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene62751 | 0.834668 | 2.62E-56 | -1.69E-46 |
| MS.gene059865 | MS.gene62751 | 0.809854 | 1.54E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene62751 | 0.808513 | 2.99E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene62751 | 0.840318 | 9.35E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene62751 | 0.809473 | 1.86E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene62751 | 0.810586 | 1.07E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene62751 | 0.823087 | 1.67E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 132 sgRNAs with CRISPR-Local
Find 245 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCGGATGCTTTGTAATTA+TGG | 0.156176 | 8.4:-81261484 | MS.gene62751:CDS |
| TTCATTGATAAGCTCATTCT+TGG | 0.197618 | 8.4:-81262285 | MS.gene62751:intron |
| ACTTGCAACAAGAAGATTAT+TGG | 0.198881 | 8.4:-81262747 | MS.gene62751:CDS |
| TCCGTAAAACTTTCAGATTC+TGG | 0.206944 | 8.4:+81263996 | None:intergenic |
| TCTATACACTCACACATTTC+AGG | 0.232231 | 8.4:+81262153 | None:intergenic |
| ATTTCTAGAATCAACGGATT+TGG | 0.234912 | 8.4:+81261850 | None:intergenic |
| ACTCCTGGGGCACTTATATC+TGG | 0.278609 | 8.4:+81261820 | None:intergenic |
| ATCTTTCACAAAGGATCTAT+TGG | 0.284929 | 8.4:+81261402 | None:intergenic |
| CAACAAAGGGAAAAGCTTAT+TGG | 0.290880 | 8.4:-81264170 | MS.gene62751:CDS |
| ACCACGGCAAAACCGGTTAA+TGG | 0.309667 | 8.4:-81261613 | MS.gene62751:CDS |
| TGAGCATTACGGACAGCTAT+TGG | 0.319050 | 8.4:+81262201 | None:intergenic |
| CAAGCTTGCCCAAGAGGATA+TGG | 0.319241 | 8.4:-81262180 | MS.gene62751:CDS |
| CCTTTGTTGGTCATTAAGTA+TGG | 0.326699 | 8.4:+81264184 | None:intergenic |
| CCAGGGTCAACAGCTTGTTT+TGG | 0.333424 | 8.4:+81261538 | None:intergenic |
| TTTCTAGAATCAACGGATTT+GGG | 0.333634 | 8.4:+81261851 | None:intergenic |
| TAATGGTACTTATAATGATT+TGG | 0.335166 | 8.4:-81261596 | MS.gene62751:CDS |
| TCCTCACTTGTTTGGTCAGA+TGG | 0.337926 | 8.4:-81261139 | MS.gene62751:CDS |
| TGTCTTCCTCCTCACTTGTT+TGG | 0.345380 | 8.4:-81261147 | MS.gene62751:CDS |
| TTGGCAGGTGAGTTTGCTTA+TGG | 0.346605 | 8.4:-81261577 | MS.gene62751:CDS |
| ATGGCATGTCCTCACATTGC+TGG | 0.348423 | 8.4:-81261703 | MS.gene62751:CDS |
| GGTGAGTTTGCTTATGGATC+TGG | 0.349482 | 8.4:-81261571 | MS.gene62751:CDS |
| CATTTGTTGTCAATGTTGTT+GGG | 0.363201 | 8.4:-81261192 | MS.gene62751:CDS |
| CTCTTCAAAATTTCAGCTAC+AGG | 0.370808 | 8.4:+81261928 | None:intergenic |
| GAGTCATAGATGGCGGAATA+TGG | 0.371039 | 8.4:-81264019 | MS.gene62751:CDS |
| GATAAGCTCATTCTTGGAAA+TGG | 0.374228 | 8.4:-81262279 | MS.gene62751:intron |
| GATAGTCTTTGCACGATGAT+TGG | 0.375501 | 8.4:+81261097 | None:intergenic |
| CATAGAATCTGGAACCTCTA+TGG | 0.386362 | 8.4:-81261722 | MS.gene62751:CDS |
| GAGCATTACGGACAGCTATT+GGG | 0.400603 | 8.4:+81262202 | None:intergenic |
| GTCAAATACAGCATAGAATC+TGG | 0.411448 | 8.4:-81261733 | MS.gene62751:CDS |
| TCATTTGTTGTCAATGTTGT+TGG | 0.413540 | 8.4:-81261193 | MS.gene62751:CDS |
| CATCATGACCACGGCAAAAC+CGG | 0.414627 | 8.4:-81261620 | MS.gene62751:CDS |
| AACAAAATTAAATATATTAG+TGG | 0.417871 | 8.4:-81261451 | MS.gene62751:CDS |
| ATTAATATTGTCCCCTCAAA+TGG | 0.423702 | 8.4:-81262234 | MS.gene62751:CDS |
| TTGGGCAAGCTTGAGCATTA+CGG | 0.425418 | 8.4:+81262190 | None:intergenic |
| ATTGAGAGTGGTTTGGTGGT+TGG | 0.427042 | 8.4:-81264041 | MS.gene62751:CDS |
| ATAGTCTTTGCACGATGATT+GGG | 0.429881 | 8.4:+81261098 | None:intergenic |
| TTGGTGGTTGGAGTCATAGA+TGG | 0.429912 | 8.4:-81264029 | MS.gene62751:CDS |
| TCATTATAAGTACCATTAAC+CGG | 0.431252 | 8.4:+81261601 | None:intergenic |
| TGAAATCATTTCATCCAGAT+TGG | 0.432307 | 8.4:-81261666 | MS.gene62751:CDS |
| ATAGATGCTGGCGACCAATC+TGG | 0.442455 | 8.4:+81261652 | None:intergenic |
| TCAATTCATTGAGAGTGGTT+TGG | 0.442596 | 8.4:-81264048 | MS.gene62751:CDS |
| TCAGGTGATCCATATCCTCT+TGG | 0.444251 | 8.4:+81262171 | None:intergenic |
| GATCAGAGTGCAAGAGACTA+TGG | 0.451359 | 8.4:-81262705 | MS.gene62751:CDS |
| ACAAGGTCGTGGGACTTCCT+TGG | 0.455572 | 8.4:-81264095 | MS.gene62751:CDS |
| CATAGAACAGTTACAAATGT+TGG | 0.458088 | 8.4:-81261319 | MS.gene62751:CDS |
| AGTAGCAGTGTAGCTTGAGT+TGG | 0.469248 | 8.4:+81261291 | None:intergenic |
| ATGTTGCAACAAATCATTGA+TGG | 0.471722 | 8.4:-81264266 | MS.gene62751:CDS |
| CAGGTGATCCATATCCTCTT+GGG | 0.477258 | 8.4:+81262172 | None:intergenic |
| TCTAAAGCCTACACTTAACT+TGG | 0.477870 | 8.4:-81262001 | MS.gene62751:CDS |
| TGATTGGGCTGTTCACCCTA+TGG | 0.478384 | 8.4:+81261113 | None:intergenic |
| TGCCCCAGGAGTGGATATCT+TGG | 0.479607 | 8.4:-81261809 | MS.gene62751:CDS |
| TGAGTGTATAGACAAGAATA+TGG | 0.485730 | 8.4:-81262142 | MS.gene62751:CDS |
| TTTGGTCAGATGGCACCCAT+AGG | 0.487592 | 8.4:-81261129 | MS.gene62751:CDS |
| TTTGTATCCAAGTTAAGTGT+AGG | 0.489055 | 8.4:+81261994 | None:intergenic |
| GCTTATGCGAATGGTGCAAT+TGG | 0.490912 | 8.4:-81262072 | MS.gene62751:CDS |
| TTCATAATTTCTAGAATCAA+CGG | 0.494033 | 8.4:+81261844 | None:intergenic |
| TTTGTCATTTATATCATCTG+AGG | 0.494361 | 8.4:+81261762 | None:intergenic |
| GGCAAGTGGAAGAGAGGTGG+AGG | 0.499056 | 8.4:-81262655 | MS.gene62751:CDS |
| CTGTAGGAGCATTGTTGTCA+TGG | 0.501407 | 8.4:+81261896 | None:intergenic |
| GGTACTTATAATGATTTGGC+AGG | 0.502252 | 8.4:-81261592 | MS.gene62751:CDS |
| GTGAGTTTGCTTATGGATCT+GGG | 0.502458 | 8.4:-81261570 | MS.gene62751:CDS |
| GTGATGTCATAAACAAGTCC+AGG | 0.505108 | 8.4:+81261520 | None:intergenic |
| TTGTCATTTATATCATCTGA+GGG | 0.508931 | 8.4:+81261763 | None:intergenic |
| GCGGCCAAGATATCCACTCC+TGG | 0.510488 | 8.4:+81261805 | None:intergenic |
| TAAAACTTACATAGTGTACA+TGG | 0.512965 | 8.4:-81264339 | MS.gene62751:CDS |
| TCAACAGGAATCACCAGTGC+TGG | 0.514654 | 8.4:+81261370 | None:intergenic |
| AGGGGAGTTTGTGCAGGCGG+TGG | 0.516084 | 8.4:-81262777 | MS.gene62751:CDS |
| CGGCCAAGATATCCACTCCT+GGG | 0.516213 | 8.4:+81261806 | None:intergenic |
| ATTATTGGAGCAAGGTCGTA+CGG | 0.518796 | 8.4:-81262732 | MS.gene62751:CDS |
| GGGAGCAGAATCAAAACAAA+TGG | 0.528691 | 8.4:-81261170 | MS.gene62751:CDS |
| TCACTAAGGAAGATTATGTT+CGG | 0.531253 | 8.4:-81261501 | MS.gene62751:CDS |
| GTAGCAGTGTAGCTTGAGTT+GGG | 0.540428 | 8.4:+81261292 | None:intergenic |
| GCAAGAGACTATGGTGGTCA+TGG | 0.540854 | 8.4:-81262696 | MS.gene62751:CDS |
| AAGTGGAGGGGAGTTTGTGC+AGG | 0.547033 | 8.4:-81262783 | MS.gene62751:CDS |
| TGATATAAATGACAAAAGAC+AGG | 0.547527 | 8.4:-81261755 | MS.gene62751:CDS |
| AGAGATCAATTCATTGAGAG+TGG | 0.552553 | 8.4:-81264053 | MS.gene62751:CDS |
| TTGGTCAGATGGCACCCATA+GGG | 0.556488 | 8.4:-81261128 | MS.gene62751:CDS |
| CCAAAACAAGCTGTTGACCC+TGG | 0.557417 | 8.4:-81261538 | MS.gene62751:CDS |
| GTTGCTTCTTTCTCTTCTCG+TGG | 0.558664 | 8.4:-81261874 | MS.gene62751:CDS |
| TACACTTAACTTGGATACAA+AGG | 0.559084 | 8.4:-81261992 | MS.gene62751:CDS |
| TGGAGGGGAGTTTGTGCAGG+CGG | 0.559611 | 8.4:-81262780 | MS.gene62751:CDS |
| AGATATAAGTGCCCCAGGAG+TGG | 0.560065 | 8.4:-81261818 | MS.gene62751:CDS |
| CATACTTAATGACCAACAAA+GGG | 0.560148 | 8.4:-81264183 | MS.gene62751:CDS |
| CACTTGCCGTTGATGCCGTG+TGG | 0.560429 | 8.4:+81262670 | None:intergenic |
| ATGCTGAGATGATGAGAGGT+TGG | 0.566161 | 8.4:+81264287 | None:intergenic |
| AGTTACAGCAGGAGCTTCAA+CGG | 0.566985 | 8.4:-81264215 | MS.gene62751:CDS |
| TCATCTGAGGGTGGCGCTAG+AGG | 0.569258 | 8.4:+81261775 | None:intergenic |
| ATTCATTGAGAGTGGTTTGG+TGG | 0.570930 | 8.4:-81264045 | MS.gene62751:CDS |
| AGATATAAACTATCCAGCAC+TGG | 0.571413 | 8.4:-81261383 | MS.gene62751:CDS |
| ACTTGCCGTTGATGCCGTGT+GGG | 0.571594 | 8.4:+81262671 | None:intergenic |
| AAACCAGATATAAGTGCCCC+AGG | 0.571838 | 8.4:-81261823 | MS.gene62751:CDS |
| CCATACTTAATGACCAACAA+AGG | 0.572184 | 8.4:-81264184 | MS.gene62751:CDS |
| GATTGGGCTGTTCACCCTAT+GGG | 0.576246 | 8.4:+81261114 | None:intergenic |
| GCTTAGTTCGAAGTTACAGC+AGG | 0.576366 | 8.4:-81264226 | MS.gene62751:CDS |
| CACACGGCATCAACGGCAAG+TGG | 0.576776 | 8.4:-81262669 | MS.gene62751:CDS |
| ATTTGTTGTCAATGTTGTTG+GGG | 0.577633 | 8.4:-81261191 | MS.gene62751:CDS |
| ACTTGTTTATGACATCACTA+AGG | 0.578909 | 8.4:-81261515 | MS.gene62751:CDS |
| GGAGAAAACTCAAGTTGCCA+TGG | 0.579032 | 8.4:-81261430 | MS.gene62751:CDS |
| AGGATCTATTGGAAGCTCCA+TGG | 0.583400 | 8.4:+81261413 | None:intergenic |
| AATGCTCAAGCTTGCCCAAG+AGG | 0.586375 | 8.4:-81262186 | MS.gene62751:CDS |
| TCAAAATATAAAGATTAGTG+TGG | 0.588980 | 8.4:-81261257 | MS.gene62751:CDS |
| ATGGCAGATTTGATAGATGC+TGG | 0.592187 | 8.4:+81261640 | None:intergenic |
| AACGGCAAGTGGAAGAGAGG+TGG | 0.600282 | 8.4:-81262658 | MS.gene62751:CDS |
| GAAGAGAAAGAAGCAACTGT+AGG | 0.603262 | 8.4:+81261880 | None:intergenic |
| GAAGTATTGGCTTATGCGAA+TGG | 0.604711 | 8.4:-81262081 | MS.gene62751:CDS |
| TGGAACCCACACGGCATCAA+CGG | 0.607633 | 8.4:-81262676 | MS.gene62751:CDS |
| TCTTCAAAATTTCAGCTACA+GGG | 0.607809 | 8.4:+81261929 | None:intergenic |
| ATCAACGGCAAGTGGAAGAG+AGG | 0.608127 | 8.4:-81262661 | MS.gene62751:CDS |
| TCATTTATATCATCTGAGGG+TGG | 0.619632 | 8.4:+81261766 | None:intergenic |
| ACAAGAAGATTATTGGAGCA+AGG | 0.621653 | 8.4:-81262740 | MS.gene62751:CDS |
| GAAAAGCTTATTGGCATGAG+AGG | 0.630715 | 8.4:-81264161 | MS.gene62751:CDS |
| ATCTGACCAAACAAGTGAGG+AGG | 0.631151 | 8.4:+81261141 | None:intergenic |
| TTTGTTGTCAATGTTGTTGG+GGG | 0.638142 | 8.4:-81261190 | MS.gene62751:CDS |
| TGATGTCATAAACAAGTCCA+GGG | 0.639410 | 8.4:+81261521 | None:intergenic |
| ATAGTTTATATCTTTCACAA+AGG | 0.651025 | 8.4:+81261393 | None:intergenic |
| GTGGTTGGAGTCATAGATGG+CGG | 0.652798 | 8.4:-81264026 | MS.gene62751:CDS |
| GCTTATTGGCATGAGAGGTG+TGG | 0.653083 | 8.4:-81264156 | MS.gene62751:CDS |
| GCAAGTGGAAGAGAGGTGGA+GGG | 0.658577 | 8.4:-81262654 | MS.gene62751:CDS |
| TGGTGGTCATGGAACCCACA+CGG | 0.664285 | 8.4:-81262685 | MS.gene62751:CDS |
| TGATTGATTGAGGAAATCCA+AGG | 0.664374 | 8.4:+81264078 | None:intergenic |
| GCCATCTGACCAAACAAGTG+AGG | 0.668116 | 8.4:+81261138 | None:intergenic |
| GCAGCAACTCCAGCAATGTG+AGG | 0.671476 | 8.4:+81261694 | None:intergenic |
| GTAGGCTTTAGAGAGACCTG+AGG | 0.673344 | 8.4:+81262012 | None:intergenic |
| CAAATCTGCCATCATGACCA+CGG | 0.673631 | 8.4:-81261629 | MS.gene62751:CDS |
| ATAGACAAGAATATGGTGAA+CGG | 0.674244 | 8.4:-81262135 | MS.gene62751:CDS |
| TGGCGCTAGAGGTGAATATG+CGG | 0.679161 | 8.4:+81261786 | None:intergenic |
| AAAACTTACATAGTGTACAT+GGG | 0.679461 | 8.4:-81264338 | MS.gene62751:CDS |
| CAACATGCTGAGATGATGAG+AGG | 0.689653 | 8.4:+81264283 | None:intergenic |
| AATGTGAGGACATGCCATAG+AGG | 0.691673 | 8.4:+81261708 | None:intergenic |
| GGCCAAGATATCCACTCCTG+GGG | 0.698020 | 8.4:+81261807 | None:intergenic |
| ATTGGAGCAAGGTCGTACGG+CGG | 0.701041 | 8.4:-81262729 | MS.gene62751:CDS |
| CAGAGTGCAAGAGACTATGG+TGG | 0.718495 | 8.4:-81262702 | MS.gene62751:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACAAAATTAAATATATTAG+TGG | - | chr8.4:81264000-81264019 | MS.gene62751:CDS | 10.0% |
| !!! | AAAATGTGATTTTATTTTAT+AGG | - | chr8.4:81262400-81262419 | MS.gene62751:intron | 10.0% |
| !!! | AAATGTGATTTTATTTTATA+GGG | - | chr8.4:81262401-81262420 | MS.gene62751:intron | 10.0% |
| !!! | TAATCTTTATATTTTGAATT+GGG | + | chr8.4:81264191-81264210 | None:intergenic | 10.0% |
| !! | ACATCTCTATATTTATAAAT+GGG | - | chr8.4:81262147-81262166 | MS.gene62751:CDS | 15.0% |
| !! | TAATTAACCCTAATTATTAT+AGG | - | chr8.4:81262465-81262484 | MS.gene62751:intron | 15.0% |
| !! | TCAATATCCTATAATAATTA+GGG | + | chr8.4:81262475-81262494 | None:intergenic | 15.0% |
| !! | TTAATAAATCTTCATAAAAG+AGG | + | chr8.4:81261639-81261658 | None:intergenic | 15.0% |
| !!! | ACAAAATTTTGAATATTTAC+AGG | - | chr8.4:81262431-81262450 | MS.gene62751:intron | 15.0% |
| !!! | CAAAATTTTGAATATTTACA+GGG | - | chr8.4:81262432-81262451 | MS.gene62751:intron | 15.0% |
| !!! | CTAATCTTTATATTTTGAAT+TGG | + | chr8.4:81264192-81264211 | None:intergenic | 15.0% |
| !!! | TAGTTTTTAGATGATAATTT+TGG | + | chr8.4:81261337-81261356 | None:intergenic | 15.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | + | chr8.4:81262211-81262230 | None:intergenic | 20.0% |
| !! | ACTGATGGAAAAAATTTATA+GGG | - | chr8.4:81262339-81262358 | MS.gene62751:intron | 20.0% |
| !! | ATAGTTTATATCTTTCACAA+AGG | + | chr8.4:81264061-81264080 | None:intergenic | 20.0% |
| !! | ATTAAAACACTCAACATATA+TGG | + | chr8.4:81262594-81262613 | None:intergenic | 20.0% |
| !! | ATTAGGGTTAATTAAGTAAA+TGG | + | chr8.4:81262459-81262478 | None:intergenic | 20.0% |
| !! | ATTATCATCTAAAAACTACA+AGG | - | chr8.4:81261339-81261358 | MS.gene62751:CDS | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | + | chr8.4:81262210-81262229 | None:intergenic | 20.0% |
| !! | CACATCTCTATATTTATAAA+TGG | - | chr8.4:81262146-81262165 | MS.gene62751:CDS | 20.0% |
| !! | CATCTCTATATTTATAAATG+GGG | - | chr8.4:81262148-81262167 | MS.gene62751:CDS | 20.0% |
| !! | GTCAATATCCTATAATAATT+AGG | + | chr8.4:81262476-81262495 | None:intergenic | 20.0% |
| !! | TAATGGTACTTATAATGATT+TGG | - | chr8.4:81263855-81263874 | MS.gene62751:intron | 20.0% |
| !! | TACGATAAAAATGATAAGAT+TGG | + | chr8.4:81262498-81262517 | None:intergenic | 20.0% |
| !! | TACTGATGGAAAAAATTTAT+AGG | - | chr8.4:81262338-81262357 | MS.gene62751:intron | 20.0% |
| !! | TCAAAATATAAAGATTAGTG+TGG | - | chr8.4:81264194-81264213 | MS.gene62751:CDS | 20.0% |
| !!! | AATCTTATCATTTTTATCGT+AGG | - | chr8.4:81262497-81262516 | MS.gene62751:intron | 20.0% |
| !!! | AATGTGTGATTTTATTTTGT+AGG | + | chr8.4:81262242-81262261 | None:intergenic | 20.0% |
| !!! | ATAAATGTTAGTTTTAGTCA+TGG | - | chr8.4:81261485-81261504 | MS.gene62751:CDS | 20.0% |
| !!! | ATGTGTGATTTTATTTTGTA+GGG | + | chr8.4:81262241-81262260 | None:intergenic | 20.0% |
| !!! | TATATGTTGAGTGTTTTAAT+TGG | - | chr8.4:81262594-81262613 | MS.gene62751:intron | 20.0% |
| !!! | TTCATAATTTCTAGAATCAA+CGG | + | chr8.4:81263610-81263629 | None:intergenic | 20.0% |
| !!! | TTTTAGAATGTGTAACATTA+AGG | + | chr8.4:81263411-81263430 | None:intergenic | 20.0% |
| ! | AAAACTTACATAGTGTACAT+GGG | - | chr8.4:81261113-81261132 | MS.gene62751:CDS | 25.0% |
| ! | ATAGAGACTAAAAATACTGA+TGG | - | chr8.4:81262324-81262343 | MS.gene62751:intron | 25.0% |
| ! | TAAAACTTACATAGTGTACA+TGG | - | chr8.4:81261112-81261131 | MS.gene62751:CDS | 25.0% |
| ! | TCATTATAAGTACCATTAAC+CGG | + | chr8.4:81263853-81263872 | None:intergenic | 25.0% |
| ! | TCTATATTTATAAATGGGGT+TGG | - | chr8.4:81262152-81262171 | MS.gene62751:CDS | 25.0% |
| ! | TGATATAAATGACAAAAGAC+AGG | - | chr8.4:81263696-81263715 | MS.gene62751:intron | 25.0% |
| ! | TTAGAAATTCTACAGCAATT+TGG | + | chr8.4:81262997-81263016 | None:intergenic | 25.0% |
| !! | AAATTTTTATGAGACTCAAC+AGG | + | chr8.4:81264099-81264118 | None:intergenic | 25.0% |
| !! | ATGCAGATGGAAAATTTTAT+AGG | - | chr8.4:81262371-81262390 | MS.gene62751:intron | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+AGG | - | chr8.4:81262275-81262294 | MS.gene62751:CDS | 25.0% |
| !! | GGATAATATGATGTTCTTTT+AGG | + | chr8.4:81261146-81261165 | None:intergenic | 25.0% |
| !! | TGCAGATGGAAAATTTTATA+GGG | - | chr8.4:81262372-81262391 | MS.gene62751:intron | 25.0% |
| !! | TTGTCATTTATATCATCTGA+GGG | + | chr8.4:81263691-81263710 | None:intergenic | 25.0% |
| !! | TTTGTCATTTATATCATCTG+AGG | + | chr8.4:81263692-81263711 | None:intergenic | 25.0% |
| !! | TTTTGTCCTTAAAATGCTTA+AGG | + | chr8.4:81262284-81262303 | None:intergenic | 25.0% |
| !!! | TTTATTTTCTATGATCGATC+AGG | - | chr8.4:81262626-81262645 | MS.gene62751:intron | 25.0% |
| ACTTGCAACAAGAAGATTAT+TGG | - | chr8.4:81262704-81262723 | MS.gene62751:CDS | 30.0% | |
| ACTTGTTTATGACATCACTA+AGG | - | chr8.4:81263936-81263955 | MS.gene62751:intron | 30.0% | |
| ATAAATATAGAGATGTGTGC+TGG | + | chr8.4:81262143-81262162 | None:intergenic | 30.0% | |
| ATAGACAAGAATATGGTGAA+CGG | - | chr8.4:81263316-81263335 | MS.gene62751:intron | 30.0% | |
| ATCAATGAATTGACGATCTA+CGG | + | chr8.4:81263155-81263174 | None:intergenic | 30.0% | |
| ATCTTTCACAAAGGATCTAT+TGG | + | chr8.4:81264052-81264071 | None:intergenic | 30.0% | |
| ATGTTGCAACAAATCATTGA+TGG | - | chr8.4:81261185-81261204 | MS.gene62751:CDS | 30.0% | |
| ATTAATATTGTCCCCTCAAA+TGG | - | chr8.4:81263217-81263236 | MS.gene62751:intron | 30.0% | |
| CATACTTAATGACCAACAAA+GGG | - | chr8.4:81261268-81261287 | MS.gene62751:CDS | 30.0% | |
| CATAGAACAGTTACAAATGT+TGG | - | chr8.4:81264132-81264151 | MS.gene62751:CDS | 30.0% | |
| GACATTATCACAATCTCAAT+TGG | - | chr8.4:81262968-81262987 | MS.gene62751:intron | 30.0% | |
| TCACTAAGGAAGATTATGTT+CGG | - | chr8.4:81263950-81263969 | MS.gene62751:intron | 30.0% | |
| TCTTCAAAATTTCAGCTACA+GGG | + | chr8.4:81263525-81263544 | None:intergenic | 30.0% | |
| TGAAATCATTTCATCCAGAT+TGG | - | chr8.4:81263785-81263804 | MS.gene62751:intron | 30.0% | |
| TGAGTGTATAGACAAGAATA+TGG | - | chr8.4:81263309-81263328 | MS.gene62751:intron | 30.0% | |
| TTAAGGACAAAAAACGTTGA+TGG | - | chr8.4:81262292-81262311 | MS.gene62751:intron | 30.0% | |
| TTCAAAGATTGCTGTATACA+GGG | - | chr8.4:81262871-81262890 | MS.gene62751:intron | 30.0% | |
| TTCATTGATAAGCTCATTCT+TGG | - | chr8.4:81263166-81263185 | MS.gene62751:intron | 30.0% | |
| TTTGTATCCAAGTTAAGTGT+AGG | + | chr8.4:81263460-81263479 | None:intergenic | 30.0% | |
| ! | AGCTTTTATGATCTTGCAAA+AGG | - | chr8.4:81262824-81262843 | MS.gene62751:intron | 30.0% |
| ! | GATCTGAATGAGAGAATTTT+TGG | + | chr8.4:81264222-81264241 | None:intergenic | 30.0% |
| ! | GGAAATGGAAAGACTTTTAT+TGG | - | chr8.4:81263187-81263206 | MS.gene62751:intron | 30.0% |
| ! | TACACTTAACTTGGATACAA+AGG | - | chr8.4:81263459-81263478 | MS.gene62751:intron | 30.0% |
| ! | TATACAGCAATCTTTGAAGA+CGG | + | chr8.4:81262869-81262888 | None:intergenic | 30.0% |
| ! | TCTGAAAGTTTTACGGATAA+AGG | - | chr8.4:81261461-81261480 | MS.gene62751:CDS | 30.0% |
| !! | ATTTCTAGAATCAACGGATT+TGG | + | chr8.4:81263604-81263623 | None:intergenic | 30.0% |
| !! | ATTTGTTGTCAATGTTGTTG+GGG | - | chr8.4:81264260-81264279 | MS.gene62751:CDS | 30.0% |
| !! | CATTTGTTGTCAATGTTGTT+GGG | - | chr8.4:81264259-81264278 | MS.gene62751:CDS | 30.0% |
| !! | TCATTTGTTGTCAATGTTGT+TGG | - | chr8.4:81264258-81264277 | MS.gene62751:CDS | 30.0% |
| !! | TGATCTCTTTTGATTGATTG+AGG | + | chr8.4:81261386-81261405 | None:intergenic | 30.0% |
| !! | TTTCTAGAATCAACGGATTT+GGG | + | chr8.4:81263603-81263622 | None:intergenic | 30.0% |
| ACAAGAAGATTATTGGAGCA+AGG | - | chr8.4:81262711-81262730 | MS.gene62751:CDS | 35.0% | |
| AGAGATCAATTCATTGAGAG+TGG | - | chr8.4:81261398-81261417 | MS.gene62751:CDS | 35.0% | |
| AGATATAAACTATCCAGCAC+TGG | - | chr8.4:81264068-81264087 | MS.gene62751:CDS | 35.0% | |
| AGGGACTAAAAAAATGCAGA+TGG | - | chr8.4:81262358-81262377 | MS.gene62751:intron | 35.0% | |
| ATAGTCTTTGCACGATGATT+GGG | + | chr8.4:81264356-81264375 | None:intergenic | 35.0% | |
| ATCTAAAAACTACAAGGTCG+TGG | - | chr8.4:81261345-81261364 | MS.gene62751:CDS | 35.0% | |
| ATGCTTAAGGAAAATGACAC+AGG | + | chr8.4:81262271-81262290 | None:intergenic | 35.0% | |
| CAACAAAGGGAAAAGCTTAT+TGG | - | chr8.4:81261281-81261300 | MS.gene62751:CDS | 35.0% | |
| CATGGAAAAGGAAATACTCA+CGG | - | chr8.4:81263048-81263067 | MS.gene62751:intron | 35.0% | |
| CCATACTTAATGACCAACAA+AGG | - | chr8.4:81261267-81261286 | MS.gene62751:CDS | 35.0% | |
| CCTTTGTTGGTCATTAAGTA+TGG | + | chr8.4:81261270-81261289 | None:intergenic | 35.0% | |
| CTAAAAGATCCTATTGCCAT+TGG | - | chr8.4:81263013-81263032 | MS.gene62751:intron | 35.0% | |
| CTAGAAACACTACTTGGTTT+AGG | + | chr8.4:81263097-81263116 | None:intergenic | 35.0% | |
| CTCTTCAAAATTTCAGCTAC+AGG | + | chr8.4:81263526-81263545 | None:intergenic | 35.0% | |
| CTTCAAAGATTGCTGTATAC+AGG | - | chr8.4:81262870-81262889 | MS.gene62751:intron | 35.0% | |
| GATAAGCTCATTCTTGGAAA+TGG | - | chr8.4:81263172-81263191 | MS.gene62751:intron | 35.0% | |
| GCAGCAATACTAAATAACCA+AGG | + | chr8.4:81263127-81263146 | None:intergenic | 35.0% | |
| GTCAAATACAGCATAGAATC+TGG | - | chr8.4:81263718-81263737 | MS.gene62751:intron | 35.0% | |
| GTTCGGATGCTTTGTAATTA+TGG | - | chr8.4:81263967-81263986 | MS.gene62751:intron | 35.0% | |
| TCAATTCATTGAGAGTGGTT+TGG | - | chr8.4:81261403-81261422 | MS.gene62751:CDS | 35.0% | |
| TCATTTATATCATCTGAGGG+TGG | + | chr8.4:81263688-81263707 | None:intergenic | 35.0% | |
| TCCGTAAAACTTTCAGATTC+TGG | + | chr8.4:81261458-81261477 | None:intergenic | 35.0% | |
| TCTAAAAACTACAAGGTCGT+GGG | - | chr8.4:81261346-81261365 | MS.gene62751:CDS | 35.0% | |
| TCTATACACTCACACATTTC+AGG | + | chr8.4:81263301-81263320 | None:intergenic | 35.0% | |
| TGAAAAGAACCAATGGCAAT+AGG | + | chr8.4:81263025-81263044 | None:intergenic | 35.0% | |
| TGATGTCATAAACAAGTCCA+GGG | + | chr8.4:81263933-81263952 | None:intergenic | 35.0% | |
| TGATTGATTGAGGAAATCCA+AGG | + | chr8.4:81261376-81261395 | None:intergenic | 35.0% | |
| TGCTTAAGGAAAATGACACA+GGG | + | chr8.4:81262270-81262289 | None:intergenic | 35.0% | |
| ! | ATACAGCAATCTTTGAAGAC+GGG | + | chr8.4:81262868-81262887 | None:intergenic | 35.0% |
| ! | CAATAAGCTTTTCCCTTTGT+TGG | + | chr8.4:81261283-81261302 | None:intergenic | 35.0% |
| ! | GCCAGAATCTGAAAGTTTTA+CGG | - | chr8.4:81261454-81261473 | MS.gene62751:CDS | 35.0% |
| ! | GGTACTTATAATGATTTGGC+AGG | - | chr8.4:81263859-81263878 | MS.gene62751:intron | 35.0% |
| ! | TCTAAAGCCTACACTTAACT+TGG | - | chr8.4:81263450-81263469 | MS.gene62751:intron | 35.0% |
| ! | TTCTAAAAATGATGCTCCTC+AGG | - | chr8.4:81263423-81263442 | MS.gene62751:intron | 35.0% |
| ! | TTCTTTTCATGCCATGGAAA+AGG | - | chr8.4:81263036-81263055 | MS.gene62751:intron | 35.0% |
| ! | TTTGTTGTCAATGTTGTTGG+GGG | - | chr8.4:81264261-81264280 | MS.gene62751:CDS | 35.0% |
| !! | GGGGTTGGTCATAATTATTA+GGG | - | chr8.4:81262167-81262186 | MS.gene62751:CDS | 35.0% |
| !! | TGGGGTTGGTCATAATTATT+AGG | - | chr8.4:81262166-81262185 | MS.gene62751:CDS | 35.0% |
| AATGTCAACTCCATCAGCAA+TGG | + | chr8.4:81262954-81262973 | None:intergenic | 40.0% | |
| AGATGGTAACTGCAATGGAA+AGG | - | chr8.4:81262904-81262923 | MS.gene62751:intron | 40.0% | |
| ATGGCAGATTTGATAGATGC+TGG | + | chr8.4:81263814-81263833 | None:intergenic | 40.0% | |
| ATGTGTGATAAGGAGGTCAA+TGG | + | chr8.4:81262094-81262113 | None:intergenic | 40.0% | |
| ATTATTGGAGCAAGGTCGTA+CGG | - | chr8.4:81262719-81262738 | MS.gene62751:CDS | 40.0% | |
| CATGGCATGAAAAGAACCAA+TGG | + | chr8.4:81263032-81263051 | None:intergenic | 40.0% | |
| GAAAAGCTTATTGGCATGAG+AGG | - | chr8.4:81261290-81261309 | MS.gene62751:CDS | 40.0% | |
| GAAGAGAAAGAAGCAACTGT+AGG | + | chr8.4:81263574-81263593 | None:intergenic | 40.0% | |
| GACAAAGATGGTAACTGCAA+TGG | - | chr8.4:81262899-81262918 | MS.gene62751:intron | 40.0% | |
| GATAGTCTTTGCACGATGAT+TGG | + | chr8.4:81264357-81264376 | None:intergenic | 40.0% | |
| GGGAGCAGAATCAAAACAAA+TGG | - | chr8.4:81264281-81264300 | MS.gene62751:CDS | 40.0% | |
| GTGATGTCATAAACAAGTCC+AGG | + | chr8.4:81263934-81263953 | None:intergenic | 40.0% | |
| ! | ATTCATTGAGAGTGGTTTGG+TGG | - | chr8.4:81261406-81261425 | MS.gene62751:CDS | 40.0% |
| ! | CATAGAATCTGGAACCTCTA+TGG | - | chr8.4:81263729-81263748 | MS.gene62751:intron | 40.0% |
| ! | CGTGAGTATTTCCTTTTCCA+TGG | + | chr8.4:81263050-81263069 | None:intergenic | 40.0% |
| ! | GTGAGTTTGCTTATGGATCT+GGG | - | chr8.4:81263881-81263900 | MS.gene62751:intron | 40.0% |
| !! | GAAGTATTGGCTTATGCGAA+TGG | - | chr8.4:81263370-81263389 | MS.gene62751:intron | 40.0% |
| !! | TTCAGCTACAGGGTATTTTG+TGG | + | chr8.4:81263515-81263534 | None:intergenic | 40.0% |
| !! | TTGTTTTGTGTGGAACACCA+GGG | - | chr8.4:81263344-81263363 | MS.gene62751:intron | 40.0% |
| !! | TTTGATGATGCCATTGCTGA+TGG | - | chr8.4:81262941-81262960 | MS.gene62751:intron | 40.0% |
| !!! | AACGGTAAGCTTGTTTTGTG+TGG | - | chr8.4:81263334-81263353 | MS.gene62751:intron | 40.0% |
| !!! | CATTGGTTCTTTTCATGCCA+TGG | - | chr8.4:81263030-81263049 | MS.gene62751:intron | 40.0% |
| !!! | GGAATTTTGTGCCATTTGAG+GGG | + | chr8.4:81263231-81263250 | None:intergenic | 40.0% |
| !!! | GGGAATTTTGTGCCATTTGA+GGG | + | chr8.4:81263232-81263251 | None:intergenic | 40.0% |
| !!! | TGGGAATTTTGTGCCATTTG+AGG | + | chr8.4:81263233-81263252 | None:intergenic | 40.0% |
| AAACCAGATATAAGTGCCCC+AGG | - | chr8.4:81263628-81263647 | MS.gene62751:intron | 45.0% | |
| AAAGGAAATACTCACGGTGC+AGG | - | chr8.4:81263054-81263073 | MS.gene62751:intron | 45.0% | |
| AATGTGAGGACATGCCATAG+AGG | + | chr8.4:81263746-81263765 | None:intergenic | 45.0% | |
| AGAGGTGGAGATGTGTGATA+AGG | + | chr8.4:81262104-81262123 | None:intergenic | 45.0% | |
| AGGATCTATTGGAAGCTCCA+TGG | + | chr8.4:81264041-81264060 | None:intergenic | 45.0% | |
| AGTAGCAGTGTAGCTTGAGT+TGG | + | chr8.4:81264163-81264182 | None:intergenic | 45.0% | |
| AGTTACAGCAGGAGCTTCAA+CGG | - | chr8.4:81261236-81261255 | MS.gene62751:CDS | 45.0% | |
| ATCTGACCAAACAAGTGAGG+AGG | + | chr8.4:81264313-81264332 | None:intergenic | 45.0% | |
| ATGCTGAGATGATGAGAGGT+TGG | + | chr8.4:81261167-81261186 | None:intergenic | 45.0% | |
| CAAATCTGCCATCATGACCA+CGG | - | chr8.4:81263822-81263841 | MS.gene62751:intron | 45.0% | |
| CAACATGCTGAGATGATGAG+AGG | + | chr8.4:81261171-81261190 | None:intergenic | 45.0% | |
| CAGGTGATCCATATCCTCTT+GGG | + | chr8.4:81263282-81263301 | None:intergenic | 45.0% | |
| GAGCATTACGGACAGCTATT+GGG | + | chr8.4:81263252-81263271 | None:intergenic | 45.0% | |
| GATCAGAGTGCAAGAGACTA+TGG | - | chr8.4:81262746-81262765 | MS.gene62751:CDS | 45.0% | |
| GCTACGCTAGAAACACTACT+TGG | + | chr8.4:81263103-81263122 | None:intergenic | 45.0% | |
| GCTTAGTTCGAAGTTACAGC+AGG | - | chr8.4:81261225-81261244 | MS.gene62751:CDS | 45.0% | |
| GCTTATGCGAATGGTGCAAT+TGG | - | chr8.4:81263379-81263398 | MS.gene62751:intron | 45.0% | |
| GTAGCAGTGTAGCTTGAGTT+GGG | + | chr8.4:81264162-81264181 | None:intergenic | 45.0% | |
| GTTGCTTCTTTCTCTTCTCG+TGG | - | chr8.4:81263577-81263596 | MS.gene62751:intron | 45.0% | |
| TACAGGGTATGCGACAAAGA+TGG | - | chr8.4:81262887-81262906 | MS.gene62751:intron | 45.0% | |
| TCAGGTGATCCATATCCTCT+TGG | + | chr8.4:81263283-81263302 | None:intergenic | 45.0% | |
| TCCCATTCCGAAAAAGTGGA+GGG | - | chr8.4:81262655-81262674 | MS.gene62751:CDS | 45.0% | |
| TCCTCACTTGTTTGGTCAGA+TGG | - | chr8.4:81264312-81264331 | MS.gene62751:CDS | 45.0% | |
| TGAGCATTACGGACAGCTAT+TGG | + | chr8.4:81263253-81263272 | None:intergenic | 45.0% | |
| TGTCTTCCTCCTCACTTGTT+TGG | - | chr8.4:81264304-81264323 | MS.gene62751:CDS | 45.0% | |
| TTCTATGATCGATCAGGCCT+TGG | - | chr8.4:81262632-81262651 | MS.gene62751:intron | 45.0% | |
| TTGGGCAAGCTTGAGCATTA+CGG | + | chr8.4:81263264-81263283 | None:intergenic | 45.0% | |
| TTGGTCCCATTCCGAAAAAG+TGG | - | chr8.4:81262651-81262670 | MS.gene62751:intron | 45.0% | |
| ! | GGAGAAAACTCAAGTTGCCA+TGG | - | chr8.4:81264021-81264040 | MS.gene62751:CDS | 45.0% |
| ! | GGTGAGTTTGCTTATGGATC+TGG | - | chr8.4:81263880-81263899 | MS.gene62751:intron | 45.0% |
| ! | TGTTTTGTGTGGAACACCAG+GGG | - | chr8.4:81263345-81263364 | MS.gene62751:intron | 45.0% |
| ! | TTGGCAGGTGAGTTTGCTTA+TGG | - | chr8.4:81263874-81263893 | MS.gene62751:intron | 45.0% |
| ! | TTGGTGGTTGGAGTCATAGA+TGG | - | chr8.4:81261422-81261441 | MS.gene62751:CDS | 45.0% |
| !! | AGAGATGTGTGCTGGTTTGA+TGG | + | chr8.4:81262135-81262154 | None:intergenic | 45.0% |
| !! | ATTGAGAGTGGTTTGGTGGT+TGG | - | chr8.4:81261410-81261429 | MS.gene62751:CDS | 45.0% |
| !! | CTGTAGGAGCATTGTTGTCA+TGG | + | chr8.4:81263558-81263577 | None:intergenic | 45.0% |
| !! | GAGTCATAGATGGCGGAATA+TGG | - | chr8.4:81261432-81261451 | MS.gene62751:CDS | 45.0% |
| !!! | ACTTTTTCGGAATGGGACCA+AGG | + | chr8.4:81262652-81262671 | None:intergenic | 45.0% |
| !!! | CAAACTCCCCTCCACTTTTT+CGG | + | chr8.4:81262665-81262684 | None:intergenic | 45.0% |
| !!! | CTTGTTTTGTGTGGAACACC+AGG | - | chr8.4:81263343-81263362 | MS.gene62751:intron | 45.0% |
| AACACCAGGGGGTGAAGTAT+TGG | - | chr8.4:81263357-81263376 | MS.gene62751:intron | 50.0% | |
| AATGCTCAAGCTTGCCCAAG+AGG | - | chr8.4:81263265-81263284 | MS.gene62751:intron | 50.0% | |
| ACCACGGCAAAACCGGTTAA+TGG | - | chr8.4:81263838-81263857 | MS.gene62751:intron | 50.0% | |
| AGATATAAGTGCCCCAGGAG+TGG | - | chr8.4:81263633-81263652 | MS.gene62751:intron | 50.0% | |
| ATAGATGCTGGCGACCAATC+TGG | + | chr8.4:81263802-81263821 | None:intergenic | 50.0% | |
| ATCAACGGCAAGTGGAAGAG+AGG | - | chr8.4:81262790-81262809 | MS.gene62751:CDS | 50.0% | |
| ATGGCATGTCCTCACATTGC+TGG | - | chr8.4:81263748-81263767 | MS.gene62751:intron | 50.0% | |
| CAAGCTTGCCCAAGAGGATA+TGG | - | chr8.4:81263271-81263290 | MS.gene62751:intron | 50.0% | |
| CAGAGTGCAAGAGACTATGG+TGG | - | chr8.4:81262749-81262768 | MS.gene62751:CDS | 50.0% | |
| CATCATGACCACGGCAAAAC+CGG | - | chr8.4:81263831-81263850 | MS.gene62751:intron | 50.0% | |
| CCAAAACAAGCTGTTGACCC+TGG | - | chr8.4:81263913-81263932 | MS.gene62751:intron | 50.0% | |
| CCCATTCCGAAAAAGTGGAG+GGG | - | chr8.4:81262656-81262675 | MS.gene62751:CDS | 50.0% | |
| GATTGGGCTGTTCACCCTAT+GGG | + | chr8.4:81264340-81264359 | None:intergenic | 50.0% | |
| GCAAGAGACTATGGTGGTCA+TGG | - | chr8.4:81262755-81262774 | MS.gene62751:CDS | 50.0% | |
| GCCATCTGACCAAACAAGTG+AGG | + | chr8.4:81264316-81264335 | None:intergenic | 50.0% | |
| GCTTATTGGCATGAGAGGTG+TGG | - | chr8.4:81261295-81261314 | MS.gene62751:CDS | 50.0% | |
| GGTGGAGATGTGTGATAAGG+AGG | + | chr8.4:81262101-81262120 | None:intergenic | 50.0% | |
| GTCCCATTCCGAAAAAGTGG+AGG | - | chr8.4:81262654-81262673 | MS.gene62751:CDS | 50.0% | |
| GTGGTTGGAGTCATAGATGG+CGG | - | chr8.4:81261425-81261444 | MS.gene62751:CDS | 50.0% | |
| TAAGCCAATACTTCACCCCC+TGG | + | chr8.4:81263364-81263383 | None:intergenic | 50.0% | |
| TCAACAGGAATCACCAGTGC+TGG | + | chr8.4:81264084-81264103 | None:intergenic | 50.0% | |
| TGATTGGGCTGTTCACCCTA+TGG | + | chr8.4:81264341-81264360 | None:intergenic | 50.0% | |
| TGGCGCTAGAGGTGAATATG+CGG | + | chr8.4:81263668-81263687 | None:intergenic | 50.0% | |
| TTGGTCAGATGGCACCCATA+GGG | - | chr8.4:81264323-81264342 | MS.gene62751:CDS | 50.0% | |
| TTTGGTCAGATGGCACCCAT+AGG | - | chr8.4:81264322-81264341 | MS.gene62751:CDS | 50.0% | |
| ! | ACTCCTGGGGCACTTATATC+TGG | + | chr8.4:81263634-81263653 | None:intergenic | 50.0% |
| ! | GGTTTGATGGTTGAGGTGAG+AGG | + | chr8.4:81262122-81262141 | None:intergenic | 50.0% |
| ! | GTTTTGTGTGGAACACCAGG+GGG | - | chr8.4:81263346-81263365 | MS.gene62751:intron | 50.0% |
| ! | TTGATGGTTGAGGTGAGAGG+TGG | + | chr8.4:81262119-81262138 | None:intergenic | 50.0% |
| ! | TTTAGGACCGCTGTTTCCTG+CGG | + | chr8.4:81263080-81263099 | None:intergenic | 50.0% |
| !! | ACCATTAACCGGTTTTGCCG+TGG | + | chr8.4:81263842-81263861 | None:intergenic | 50.0% |
| !! | CCAGGGTCAACAGCTTGTTT+TGG | + | chr8.4:81263916-81263935 | None:intergenic | 50.0% |
| !! | GTAGGCTTTAGAGAGACCTG+AGG | + | chr8.4:81263442-81263461 | None:intergenic | 50.0% |
| !! | GTGTGCTGGTTTGATGGTTG+AGG | + | chr8.4:81262129-81262148 | None:intergenic | 50.0% |
| !! | GTGTTTCTAGCGTAGCACCT+TGG | - | chr8.4:81263107-81263126 | MS.gene62751:intron | 50.0% |
| !!! | CCCCTCCACTTTTTCGGAAT+GGG | + | chr8.4:81262659-81262678 | None:intergenic | 50.0% |
| !!! | TCCCCTCCACTTTTTCGGAA+TGG | + | chr8.4:81262660-81262679 | None:intergenic | 50.0% |
| AACGGCAAGTGGAAGAGAGG+TGG | - | chr8.4:81262793-81262812 | MS.gene62751:CDS | 55.0% | |
| AAGTGGAGGGGAGTTTGTGC+AGG | - | chr8.4:81262668-81262687 | MS.gene62751:CDS | 55.0% | |
| ACAAGGTCGTGGGACTTCCT+TGG | - | chr8.4:81261356-81261375 | MS.gene62751:CDS | 55.0% | |
| ACTTGCCGTTGATGCCGTGT+GGG | + | chr8.4:81262783-81262802 | None:intergenic | 55.0% | |
| ATTGGAGCAAGGTCGTACGG+CGG | - | chr8.4:81262722-81262741 | MS.gene62751:CDS | 55.0% | |
| CGGCCAAGATATCCACTCCT+GGG | + | chr8.4:81263648-81263667 | None:intergenic | 55.0% | |
| GCAAGTGGAAGAGAGGTGGA+GGG | - | chr8.4:81262797-81262816 | MS.gene62751:CDS | 55.0% | |
| GCAGCAACTCCAGCAATGTG+AGG | + | chr8.4:81263760-81263779 | None:intergenic | 55.0% | |
| GGCCAAGATATCCACTCCTG+GGG | + | chr8.4:81263647-81263666 | None:intergenic | 55.0% | |
| TGCCCCAGGAGTGGATATCT+TGG | - | chr8.4:81263642-81263661 | MS.gene62751:intron | 55.0% | |
| TGGAACCCACACGGCATCAA+CGG | - | chr8.4:81262775-81262794 | MS.gene62751:CDS | 55.0% | |
| TGGTGGTCATGGAACCCACA+CGG | - | chr8.4:81262766-81262785 | MS.gene62751:CDS | 55.0% | |
| ! | CGGTTTTGCCGTGGTCATGA+TGG | + | chr8.4:81263833-81263852 | None:intergenic | 55.0% |
| !! | CTTGCAAAAGGCACCGCAAG+AGG | - | chr8.4:81262836-81262855 | MS.gene62751:intron | 55.0% |
| AGACGGGACACCACCTCTTG+CGG | + | chr8.4:81262852-81262871 | None:intergenic | 60.0% | |
| CACACGGCATCAACGGCAAG+TGG | - | chr8.4:81262782-81262801 | MS.gene62751:CDS | 60.0% | |
| CACTTGCCGTTGATGCCGTG+TGG | + | chr8.4:81262784-81262803 | None:intergenic | 60.0% | |
| GCGGCCAAGATATCCACTCC+TGG | + | chr8.4:81263649-81263668 | None:intergenic | 60.0% | |
| GGCAAGTGGAAGAGAGGTGG+AGG | - | chr8.4:81262796-81262815 | MS.gene62751:CDS | 60.0% | |
| TCATCTGAGGGTGGCGCTAG+AGG | + | chr8.4:81263679-81263698 | None:intergenic | 60.0% | |
| TGGAGGGGAGTTTGTGCAGG+CGG | - | chr8.4:81262671-81262690 | MS.gene62751:CDS | 60.0% | |
| !! | GCAAAAGGCACCGCAAGAGG+TGG | - | chr8.4:81262839-81262858 | MS.gene62751:intron | 60.0% |
| AGGGGAGTTTGTGCAGGCGG+TGG | - | chr8.4:81262674-81262693 | MS.gene62751:CDS | 65.0% | |
| ATACTCACGGTGCAGGCCGC+AGG | - | chr8.4:81263061-81263080 | MS.gene62751:intron | 65.0% | |
| GTGCAGGCCGCAGGAAACAG+CGG | - | chr8.4:81263070-81263089 | MS.gene62751:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 81261093 | 81264380 | 81261093 | ID=MS.gene62751 |
| chr8.4 | mRNA | 81261093 | 81264380 | 81261093 | ID=MS.gene62751.t1;Parent=MS.gene62751 |
| chr8.4 | exon | 81263991 | 81264380 | 81263991 | ID=MS.gene62751.t1.exon1;Parent=MS.gene62751.t1 |
| chr8.4 | CDS | 81263991 | 81264380 | 81263991 | ID=cds.MS.gene62751.t1;Parent=MS.gene62751.t1 |
| chr8.4 | exon | 81262653 | 81262825 | 81262653 | ID=MS.gene62751.t1.exon2;Parent=MS.gene62751.t1 |
| chr8.4 | CDS | 81262653 | 81262825 | 81262653 | ID=cds.MS.gene62751.t1;Parent=MS.gene62751.t1 |
| chr8.4 | exon | 81261093 | 81262295 | 81261093 | ID=MS.gene62751.t1.exon3;Parent=MS.gene62751.t1 |
| chr8.4 | CDS | 81261093 | 81262295 | 81261093 | ID=cds.MS.gene62751.t1;Parent=MS.gene62751.t1 |
| Gene Sequence |
| Protein sequence |
