Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62800.t1 | XP_013457681.1 | 91.9 | 444 | 18 | 3 | 1 | 443 | 1 | 427 | 8.30E-213 | 749.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62800.t1 | A0A072UPT6 | 91.9 | 444 | 18 | 3 | 1 | 443 | 1 | 427 | 6.0e-213 | 749.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene62800 | -0.829823 | 4.15E-55 | -1.69E-46 |
| MS.gene049217 | MS.gene62800 | -0.80289 | 4.53E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene62800 | -0.82622 | 3.06E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene62800 | -0.833203 | 6.10E-56 | -1.69E-46 |
| MS.gene049805 | MS.gene62800 | -0.812414 | 4.29E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene62800 | -0.817541 | 3.13E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene62800 | -0.807236 | 5.58E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene62800 | -0.801403 | 9.16E-49 | -1.69E-46 |
| MS.gene050444 | MS.gene62800 | -0.80097 | 1.12E-48 | -1.69E-46 |
| MS.gene050504 | MS.gene62800 | -0.822686 | 2.07E-53 | -1.69E-46 |
| MS.gene050577 | MS.gene62800 | -0.839645 | 1.40E-57 | -1.69E-46 |
| MS.gene050612 | MS.gene62800 | -0.829911 | 3.95E-55 | -1.69E-46 |
| MS.gene050699 | MS.gene62800 | -0.814607 | 1.41E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene62800 | -0.807112 | 5.93E-50 | -1.69E-46 |
| MS.gene050833 | MS.gene62800 | 0.812143 | 4.92E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene62800 | 0.807261 | 5.51E-50 | -1.69E-46 |
| MS.gene051632 | MS.gene62800 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene62800 | -0.818843 | 1.59E-52 | -1.69E-46 |
| MS.gene052164 | MS.gene62800 | -0.816744 | 4.72E-52 | -1.69E-46 |
| MS.gene05240 | MS.gene62800 | 0.81161 | 6.42E-51 | -1.69E-46 |
| MS.gene052606 | MS.gene62800 | 0.820459 | 6.78E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene62800 | -0.812273 | 4.61E-51 | -1.69E-46 |
| MS.gene053579 | MS.gene62800 | -0.834251 | 3.34E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene62800 | -0.836694 | 8.05E-57 | -1.69E-46 |
| MS.gene054290 | MS.gene62800 | 0.804539 | 2.06E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene62800 | -0.803941 | 2.74E-49 | -1.69E-46 |
| MS.gene054642 | MS.gene62800 | -0.828397 | 9.20E-55 | -1.69E-46 |
| MS.gene05470 | MS.gene62800 | -0.802791 | 4.74E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene62800 | 0.808501 | 3.00E-50 | -1.69E-46 |
| MS.gene055154 | MS.gene62800 | 0.834758 | 2.49E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene62800 | -0.806636 | 7.47E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene62800 | -0.821286 | 4.38E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene62800 | -0.834885 | 2.31E-56 | -1.69E-46 |
| MS.gene055577 | MS.gene62800 | -0.811051 | 8.49E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene62800 | -0.822742 | 2.01E-53 | -1.69E-46 |
| MS.gene055750 | MS.gene62800 | -0.81192 | 5.50E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene62800 | -0.811374 | 7.23E-51 | -1.69E-46 |
| MS.gene055956 | MS.gene62800 | 0.805319 | 1.41E-49 | -1.69E-46 |
| MS.gene056224 | MS.gene62800 | 0.814539 | 1.46E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene62800 | -0.806417 | 8.31E-50 | -1.69E-46 |
| MS.gene056657 | MS.gene62800 | -0.816941 | 4.27E-52 | -1.69E-46 |
| MS.gene056748 | MS.gene62800 | 0.80684 | 6.76E-50 | -1.69E-46 |
| MS.gene056856 | MS.gene62800 | 0.817079 | 3.97E-52 | -1.69E-46 |
| MS.gene057146 | MS.gene62800 | -0.803145 | 4.01E-49 | -1.69E-46 |
| MS.gene057246 | MS.gene62800 | -0.833501 | 5.14E-56 | -1.69E-46 |
| MS.gene057261 | MS.gene62800 | 0.804482 | 2.12E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene62800 | -0.808687 | 2.74E-50 | -1.69E-46 |
| MS.gene058099 | MS.gene62800 | 0.800379 | 1.48E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene62800 | 0.806983 | 6.31E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene62800 | -0.835238 | 1.89E-56 | -1.69E-46 |
| MS.gene058544 | MS.gene62800 | -0.835127 | 2.01E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene62800 | -0.811313 | 7.45E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene62800 | -0.800948 | 1.13E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene62800 | -0.815679 | 8.17E-52 | -1.69E-46 |
| MS.gene059694 | MS.gene62800 | 0.802709 | 4.93E-49 | -1.69E-46 |
| MS.gene059697 | MS.gene62800 | 0.802088 | 6.62E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene62800 | -0.816352 | 5.78E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene62800 | -0.813256 | 2.81E-51 | -1.69E-46 |
| MS.gene059955 | MS.gene62800 | 0.8056 | 1.23E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene62800 | -0.805412 | 1.35E-49 | -1.69E-46 |
| MS.gene060405 | MS.gene62800 | 0.80508 | 1.59E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene62800 | -0.816609 | 5.06E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene62800 | -0.821597 | 3.71E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62800.t1 | MTR_4g102840 | 93.468 | 444 | 11 | 3 | 1 | 443 | 1 | 427 | 0.0 | 850 |
| MS.gene62800.t1 | MTR_0019s0070 | 40.113 | 354 | 179 | 10 | 106 | 442 | 119 | 456 | 1.76e-59 | 201 |
| MS.gene62800.t1 | MTR_1g101330 | 42.222 | 315 | 148 | 10 | 97 | 398 | 108 | 401 | 3.72e-52 | 181 |
| MS.gene62800.t1 | MTR_8g014580 | 37.528 | 453 | 172 | 18 | 1 | 408 | 1 | 387 | 4.08e-37 | 140 |
| MS.gene62800.t1 | MTR_1g103070 | 33.182 | 440 | 196 | 14 | 27 | 434 | 46 | 419 | 6.79e-36 | 138 |
| MS.gene62800.t1 | MTR_8g102400 | 31.659 | 458 | 217 | 17 | 1 | 417 | 1 | 403 | 1.02e-31 | 125 |
| MS.gene62800.t1 | MTR_8g024540 | 30.445 | 427 | 216 | 13 | 34 | 388 | 50 | 467 | 4.11e-26 | 111 |
| MS.gene62800.t1 | MTR_1g041430 | 41.176 | 170 | 79 | 5 | 1 | 156 | 1 | 163 | 3.44e-21 | 95.9 |
| MS.gene62800.t1 | MTR_2g100740 | 37.912 | 182 | 62 | 5 | 1 | 160 | 1 | 153 | 4.01e-20 | 91.7 |
| MS.gene62800.t1 | MTR_7g114870 | 28.049 | 410 | 190 | 13 | 1 | 389 | 1 | 326 | 8.73e-19 | 88.2 |
| MS.gene62800.t1 | MTR_0047s0040 | 28.713 | 303 | 163 | 10 | 99 | 387 | 93 | 356 | 1.20e-16 | 82.0 |
| MS.gene62800.t1 | MTR_4g050480 | 35.152 | 165 | 79 | 3 | 1 | 155 | 1 | 147 | 1.03e-15 | 79.3 |
| MS.gene62800.t1 | MTR_4g050480 | 35.758 | 165 | 79 | 3 | 1 | 155 | 1 | 148 | 1.81e-15 | 78.6 |
| MS.gene62800.t1 | MTR_1g051810 | 26.246 | 301 | 154 | 11 | 106 | 390 | 107 | 355 | 5.39e-15 | 76.6 |
| MS.gene62800.t1 | MTR_2g102380 | 88.571 | 35 | 4 | 0 | 406 | 440 | 1 | 35 | 3.82e-13 | 65.1 |
| MS.gene62800.t1 | MTR_3g104570 | 35.484 | 155 | 87 | 5 | 1 | 155 | 1 | 142 | 5.85e-13 | 70.9 |
| MS.gene62800.t1 | MTR_8g074730 | 50.746 | 67 | 33 | 0 | 102 | 168 | 69 | 135 | 6.03e-12 | 63.5 |
| MS.gene62800.t1 | MTR_7g114700 | 40.310 | 129 | 55 | 4 | 63 | 170 | 73 | 200 | 2.59e-11 | 65.9 |
| MS.gene62800.t1 | MTR_4g108140 | 49.180 | 61 | 31 | 0 | 100 | 160 | 95 | 155 | 3.60e-11 | 65.5 |
| MS.gene62800.t1 | MTR_4g108140 | 49.180 | 61 | 31 | 0 | 100 | 160 | 96 | 156 | 3.60e-11 | 65.5 |
| MS.gene62800.t1 | MTR_1g095740 | 45.455 | 77 | 41 | 1 | 98 | 174 | 135 | 210 | 5.80e-11 | 64.7 |
| MS.gene62800.t1 | MTR_4g087420 | 47.541 | 61 | 32 | 0 | 106 | 166 | 148 | 208 | 9.63e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62800.t1 | AT4G23060 | 44.350 | 354 | 147 | 15 | 104 | 443 | 167 | 484 | 6.15e-66 | 219 |
| MS.gene62800.t1 | AT3G16490 | 31.311 | 412 | 190 | 13 | 1 | 394 | 1 | 337 | 2.18e-33 | 130 |
| MS.gene62800.t1 | AT5G07240 | 35.854 | 410 | 182 | 13 | 12 | 403 | 1 | 347 | 1.06e-28 | 117 |
| MS.gene62800.t1 | AT5G07240 | 34.472 | 322 | 138 | 10 | 92 | 403 | 135 | 393 | 1.66e-28 | 117 |
| MS.gene62800.t1 | AT5G62070 | 37.013 | 308 | 122 | 12 | 103 | 404 | 116 | 357 | 1.37e-26 | 111 |
| MS.gene62800.t1 | AT4G14750 | 40.936 | 171 | 82 | 5 | 1 | 161 | 1 | 162 | 3.83e-23 | 100 |
| MS.gene62800.t1 | AT4G14750 | 40.936 | 171 | 82 | 5 | 1 | 161 | 60 | 221 | 5.92e-23 | 101 |
| MS.gene62800.t1 | AT4G14750 | 40.936 | 171 | 82 | 5 | 1 | 161 | 60 | 221 | 6.32e-23 | 101 |
| MS.gene62800.t1 | AT1G51960 | 38.547 | 179 | 82 | 4 | 1 | 167 | 1 | 163 | 3.63e-21 | 94.7 |
| MS.gene62800.t1 | AT3G49380 | 40.625 | 160 | 78 | 4 | 25 | 183 | 46 | 189 | 5.43e-19 | 88.6 |
| MS.gene62800.t1 | AT1G01110 | 63.077 | 65 | 24 | 0 | 98 | 162 | 115 | 179 | 1.27e-15 | 79.3 |
| MS.gene62800.t1 | AT4G00820 | 65.574 | 61 | 21 | 0 | 102 | 162 | 130 | 190 | 2.04e-15 | 79.0 |
| MS.gene62800.t1 | AT4G10640 | 36.552 | 145 | 77 | 3 | 15 | 159 | 26 | 155 | 3.33e-15 | 77.8 |
| MS.gene62800.t1 | AT4G29150 | 33.333 | 189 | 97 | 5 | 1 | 169 | 17 | 196 | 6.92e-15 | 76.6 |
| MS.gene62800.t1 | AT2G26180 | 34.810 | 158 | 77 | 3 | 1 | 155 | 1 | 135 | 1.20e-14 | 75.9 |
| MS.gene62800.t1 | AT1G17480 | 43.820 | 89 | 43 | 1 | 98 | 186 | 88 | 169 | 6.78e-14 | 73.2 |
| MS.gene62800.t1 | AT3G49260 | 56.716 | 67 | 28 | 1 | 106 | 172 | 122 | 187 | 4.04e-13 | 71.6 |
| MS.gene62800.t1 | AT3G49260 | 56.716 | 67 | 28 | 1 | 106 | 172 | 122 | 187 | 4.04e-13 | 71.6 |
| MS.gene62800.t1 | AT3G49260 | 56.716 | 67 | 28 | 1 | 106 | 172 | 122 | 187 | 4.04e-13 | 71.6 |
| MS.gene62800.t1 | AT3G49260 | 56.716 | 67 | 28 | 1 | 106 | 172 | 122 | 187 | 4.05e-13 | 71.6 |
| MS.gene62800.t1 | AT5G13460 | 29.545 | 176 | 101 | 4 | 9 | 167 | 5 | 174 | 7.28e-13 | 70.5 |
| MS.gene62800.t1 | AT1G72670 | 53.125 | 64 | 30 | 0 | 101 | 164 | 90 | 153 | 1.09e-12 | 70.1 |
| MS.gene62800.t1 | AT3G22190 | 66.667 | 54 | 18 | 0 | 102 | 155 | 86 | 139 | 2.62e-12 | 68.9 |
| MS.gene62800.t1 | AT3G22190 | 66.667 | 54 | 18 | 0 | 102 | 155 | 86 | 139 | 2.62e-12 | 68.9 |
| MS.gene62800.t1 | AT3G22190 | 66.667 | 54 | 18 | 0 | 102 | 155 | 86 | 139 | 2.62e-12 | 68.9 |
| MS.gene62800.t1 | AT3G22190 | 66.667 | 54 | 18 | 0 | 102 | 155 | 86 | 139 | 2.62e-12 | 68.9 |
| MS.gene62800.t1 | AT5G03040 | 35.714 | 112 | 72 | 0 | 69 | 180 | 80 | 191 | 3.71e-12 | 68.6 |
| MS.gene62800.t1 | AT5G03040 | 35.714 | 112 | 72 | 0 | 69 | 180 | 80 | 191 | 3.71e-12 | 68.6 |
| MS.gene62800.t1 | AT5G03040 | 35.714 | 112 | 72 | 0 | 69 | 180 | 80 | 191 | 3.71e-12 | 68.6 |
| MS.gene62800.t1 | AT1G74690 | 39.583 | 96 | 55 | 2 | 81 | 176 | 92 | 184 | 3.76e-12 | 68.6 |
| MS.gene62800.t1 | AT1G18840 | 31.737 | 167 | 105 | 2 | 1 | 160 | 1 | 165 | 6.96e-12 | 67.8 |
| MS.gene62800.t1 | AT1G18840 | 31.737 | 167 | 105 | 2 | 1 | 160 | 1 | 165 | 6.96e-12 | 67.8 |
| MS.gene62800.t1 | AT1G18840 | 31.737 | 167 | 105 | 2 | 1 | 160 | 1 | 165 | 6.96e-12 | 67.8 |
| MS.gene62800.t1 | AT1G14380 | 30.256 | 195 | 104 | 10 | 1 | 180 | 1 | 178 | 8.78e-12 | 67.8 |
| MS.gene62800.t1 | AT1G14380 | 30.256 | 195 | 104 | 10 | 1 | 180 | 1 | 178 | 8.78e-12 | 67.8 |
| MS.gene62800.t1 | AT1G14380 | 30.256 | 195 | 104 | 10 | 1 | 180 | 1 | 178 | 8.78e-12 | 67.8 |
| MS.gene62800.t1 | AT3G51380 | 55.556 | 63 | 28 | 0 | 102 | 164 | 35 | 97 | 9.00e-12 | 62.0 |
| MS.gene62800.t1 | AT1G14380 | 30.256 | 195 | 104 | 10 | 1 | 180 | 1 | 178 | 9.17e-12 | 67.4 |
| MS.gene62800.t1 | AT1G14380 | 30.256 | 195 | 104 | 10 | 1 | 180 | 1 | 178 | 9.17e-12 | 67.4 |
| MS.gene62800.t1 | AT1G14380 | 30.256 | 195 | 104 | 10 | 1 | 180 | 1 | 178 | 9.17e-12 | 67.4 |
| MS.gene62800.t1 | AT1G14380 | 30.256 | 195 | 104 | 10 | 1 | 180 | 1 | 178 | 1.10e-11 | 67.4 |
| MS.gene62800.t1 | AT3G52290 | 54.386 | 57 | 26 | 0 | 103 | 159 | 107 | 163 | 1.53e-11 | 66.2 |
| MS.gene62800.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 324 | 384 | 7.20e-11 | 64.7 |
| MS.gene62800.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 324 | 384 | 7.20e-11 | 64.7 |
| MS.gene62800.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 324 | 384 | 7.20e-11 | 64.7 |
| MS.gene62800.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 324 | 384 | 7.20e-11 | 64.7 |
| MS.gene62800.t1 | AT2G43680 | 47.541 | 61 | 32 | 0 | 106 | 166 | 325 | 385 | 7.46e-11 | 64.7 |
Find 88 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGCACTGCGAGCATTAAA+AGG | 0.242876 | 8.1:-20972721 | MS.gene62800:CDS |
| CTCCATCTACGTTTCTCTTT+AGG | 0.251832 | 8.1:+20974582 | None:intergenic |
| TCATATTGAGGCCTTTGTTT+TGG | 0.270764 | 8.1:+20971536 | None:intergenic |
| TCGCTTCTTGTAGGAGTAAA+AGG | 0.280382 | 8.1:+20971653 | None:intergenic |
| CTTGGGCCATCGCTTCTTGT+AGG | 0.300119 | 8.1:+20971644 | None:intergenic |
| GCCATTGGAGAGACAAGATT+TGG | 0.302734 | 8.1:+20972048 | None:intergenic |
| AGGATTGTTGAAATTGATTC+GGG | 0.318333 | 8.1:-20971932 | MS.gene62800:CDS |
| AGAAATCGAGTTCGTCAAAT+AGG | 0.340961 | 8.1:-20971514 | MS.gene62800:CDS |
| GAATCAAAATCTCATCAATT+TGG | 0.345515 | 8.1:-20971818 | MS.gene62800:CDS |
| AGATGGTTTCGTGGCCTTCT+TGG | 0.360236 | 8.1:-20974648 | MS.gene62800:CDS |
| TAGCCTCTAACGTAGCTTCT+TGG | 0.363546 | 8.1:+20971626 | None:intergenic |
| CTATCCTGGTTCCGGTCGTT+TGG | 0.371033 | 8.1:-20971411 | MS.gene62800:CDS |
| TATATTTCATTGCAGAGAAA+TGG | 0.379392 | 8.1:-20972073 | MS.gene62800:intron |
| TAGGATTGTTGAAATTGATT+CGG | 0.384536 | 8.1:-20971933 | MS.gene62800:CDS |
| TTCTGACTGTAATAATAATC+AGG | 0.390223 | 8.1:+20971857 | None:intergenic |
| TTCATGCTCCTAGATCTAAC+AGG | 0.395194 | 8.1:+20972214 | None:intergenic |
| AGCTGCCACGGCAGCGGCTG+CGG | 0.395461 | 8.1:-20974460 | MS.gene62800:CDS |
| TGGACACGACATGGCAAGAT+TGG | 0.396032 | 8.1:-20971480 | MS.gene62800:CDS |
| CGATGGCCTGTCTGTTGTTA+TGG | 0.400810 | 8.1:+20974490 | None:intergenic |
| CTGAAAGCCCTGTTAGATCT+AGG | 0.408830 | 8.1:-20972222 | MS.gene62800:CDS |
| AGCAAAGGCTATCCTGGTTC+CGG | 0.408863 | 8.1:-20971419 | MS.gene62800:CDS |
| TTCTGATATGTTGCCGCCAT+TGG | 0.414525 | 8.1:+20972033 | None:intergenic |
| AGCCTCTAACGTAGCTTCTT+GGG | 0.430229 | 8.1:+20971627 | None:intergenic |
| CTGTATAAGCCATGTAGCTT+GGG | 0.434818 | 8.1:+20971594 | None:intergenic |
| CATCGCTGTGGCAGCTGCCA+CGG | 0.435054 | 8.1:-20974472 | MS.gene62800:CDS |
| CACCTAAAGAGAAACGTAGA+TGG | 0.439241 | 8.1:-20974584 | MS.gene62800:CDS |
| TTCACTAGCAAAGGCTATCC+TGG | 0.450957 | 8.1:-20971425 | MS.gene62800:CDS |
| GGCCCAAGAAGCTACGTTAG+AGG | 0.459692 | 8.1:-20971629 | MS.gene62800:CDS |
| TGCCACGGCAGCGGCTGCGG+AGG | 0.471769 | 8.1:-20974457 | MS.gene62800:CDS |
| ATCAGTTAGACGAACAATCA+TGG | 0.472299 | 8.1:-20972009 | MS.gene62800:CDS |
| TCCGGTCGTTTGGATAAGCT+TGG | 0.473131 | 8.1:-20971401 | MS.gene62800:CDS |
| TCTGTATAAGCCATGTAGCT+TGG | 0.474265 | 8.1:+20971593 | None:intergenic |
| CGTCAGGATACGCGAACAAT+GGG | 0.483008 | 8.1:-20974370 | MS.gene62800:CDS |
| TGTGGCAGCTGCCACGGCAG+CGG | 0.485488 | 8.1:-20974466 | MS.gene62800:CDS |
| CATCTACGTTTCTCTTTAGG+TGG | 0.491070 | 8.1:+20974585 | None:intergenic |
| CGTGGCAGCTGCCACAGCGA+TGG | 0.491710 | 8.1:+20974473 | None:intergenic |
| AACCTCCGCAGCCGCTGCCG+TGG | 0.492017 | 8.1:+20974455 | None:intergenic |
| TGTGACCTCTCACCAGTGCT+TGG | 0.493392 | 8.1:+20972686 | None:intergenic |
| AGATTTAATTACAGCAGTAA+TGG | 0.493826 | 8.1:-20974396 | MS.gene62800:CDS |
| TTGAAATTGTTAGGCAAGGA+AGG | 0.494374 | 8.1:-20972740 | MS.gene62800:intron |
| CATCAATATCTATACCCTAC+AGG | 0.494588 | 8.1:+20971374 | None:intergenic |
| TTGTTATGGACATGTTCTGT+TGG | 0.504792 | 8.1:+20974504 | None:intergenic |
| AACTTCCACGAAAAGCGGCT+TGG | 0.506836 | 8.1:+20974334 | None:intergenic |
| GATCACTTGTGGAGTAAAAG+AGG | 0.507191 | 8.1:+20971879 | None:intergenic |
| AACCAAACTTCCACGAAAAG+CGG | 0.516897 | 8.1:+20974329 | None:intergenic |
| TCAAATAGGTACTCACTCAA+TGG | 0.517109 | 8.1:-20971500 | MS.gene62800:CDS |
| CTCTGATTACCCAAGCTACA+TGG | 0.521640 | 8.1:-20971603 | MS.gene62800:CDS |
| GAACTCGATTTCTCATATTG+AGG | 0.523559 | 8.1:+20971524 | None:intergenic |
| ACAGCAGTAATGGCATCGTC+AGG | 0.529912 | 8.1:-20974386 | MS.gene62800:CDS |
| TCAGAATTTGACCCCTTCAA+AGG | 0.531017 | 8.1:-20971840 | MS.gene62800:CDS |
| TCCAAATCTTGTCTCTCCAA+TGG | 0.536667 | 8.1:-20972049 | MS.gene62800:CDS |
| TGCACTCATAGATCTAACTT+TGG | 0.539356 | 8.1:+20971559 | None:intergenic |
| ATGAAATCTGAGCATTCACC+TGG | 0.541331 | 8.1:-20972196 | MS.gene62800:CDS |
| GATAAGCTTGGAATGCCTGT+AGG | 0.551546 | 8.1:-20971389 | MS.gene62800:CDS |
| CAAGAAAATACCTTGAGTCC+AGG | 0.551923 | 8.1:+20972178 | None:intergenic |
| TCTGCAACTTCAAAAGATGA+TGG | 0.554569 | 8.1:-20971689 | MS.gene62800:CDS |
| ACTGCGAGCATTAAAAGGGC+TGG | 0.555861 | 8.1:-20972716 | MS.gene62800:CDS |
| CAAGCAAGCTTCACTAGCAA+AGG | 0.562259 | 8.1:-20971434 | MS.gene62800:CDS |
| TCCAAGCTTATCCAAACGAC+CGG | 0.564514 | 8.1:+20971400 | None:intergenic |
| AGGCACTGCGAGCATTAAAA+GGG | 0.564754 | 8.1:-20972720 | MS.gene62800:CDS |
| ATAAGCTTGGAATGCCTGTA+GGG | 0.568830 | 8.1:-20971388 | MS.gene62800:CDS |
| TGGTGAGAGGTCACATTGAG+AGG | 0.570721 | 8.1:-20972678 | MS.gene62800:CDS |
| CACTAATAAGAACATATAGC+AGG | 0.570955 | 8.1:-20971973 | MS.gene62800:CDS |
| TGAGCATTCACCTGGACTCA+AGG | 0.572382 | 8.1:-20972188 | MS.gene62800:intron |
| GCTGGTGAAACTCCAAGCAC+TGG | 0.572685 | 8.1:-20972698 | MS.gene62800:CDS |
| TCGTCAGGATACGCGAACAA+TGG | 0.574295 | 8.1:-20974371 | MS.gene62800:CDS |
| CCCACTAAAACTTAACGAAG+TGG | 0.574632 | 8.1:-20971759 | MS.gene62800:CDS |
| CTCACTCAATGGACACGACA+TGG | 0.576134 | 8.1:-20971489 | MS.gene62800:CDS |
| TTATCCAAACGACCGGAACC+AGG | 0.578361 | 8.1:+20971407 | None:intergenic |
| GTTGCAGATGATAAAAGTTG+AGG | 0.588792 | 8.1:+20971704 | None:intergenic |
| TGGTCAAAGTGTATCTTGTG+AGG | 0.590678 | 8.1:-20971798 | MS.gene62800:CDS |
| AAAGCATCAAGATGGTTTCG+TGG | 0.592249 | 8.1:-20974657 | MS.gene62800:CDS |
| ATAATAATCAGGATCACTTG+TGG | 0.594762 | 8.1:+20971868 | None:intergenic |
| CAATGGGAAAAGCATCAAGA+TGG | 0.597654 | 8.1:-20974665 | MS.gene62800:CDS |
| ATTCAAATGTGACGTTTGCA+TGG | 0.610840 | 8.1:+20972582 | None:intergenic |
| ACATGTCCATAACAACAGAC+AGG | 0.613391 | 8.1:-20974496 | MS.gene62800:CDS |
| TTTACTCCTACAAGAAGCGA+TGG | 0.621425 | 8.1:-20971650 | MS.gene62800:CDS |
| AAATGCTCAAAATGCTGCCG+AGG | 0.628374 | 8.1:-20974424 | MS.gene62800:CDS |
| AAACTCCAAGCACTGGTGAG+AGG | 0.631533 | 8.1:-20972691 | MS.gene62800:CDS |
| CTATGAGTGCACCAAAACAA+AGG | 0.632089 | 8.1:-20971547 | MS.gene62800:CDS |
| GGCTTATACAGAGTCAGCAA+AGG | 0.639300 | 8.1:-20971582 | MS.gene62800:CDS |
| GTAATTAAATCTGACAACCT+CGG | 0.643378 | 8.1:+20974407 | None:intergenic |
| TAATTACACATACATAGAGG+TGG | 0.652638 | 8.1:+20972542 | None:intergenic |
| AAATCTTGTCTCTCCAATGG+CGG | 0.653496 | 8.1:-20972046 | MS.gene62800:CDS |
| TCATGCTCCTAGATCTAACA+GGG | 0.657366 | 8.1:+20972215 | None:intergenic |
| CAACAGACAGGCCATCGCTG+TGG | 0.692042 | 8.1:-20974484 | MS.gene62800:CDS |
| AGAGGAAACGAACAGCAGAG+TGG | 0.734572 | 8.1:-20972660 | MS.gene62800:CDS |
| GTTCTGTTGGAAACGTGACG+TGG | 0.750062 | 8.1:+20974517 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATAAAATTAAAATTTAT+TGG | + | chr8.1:20971865-20971884 | None:intergenic | 0.0% |
| !! | ATAAAATTAAAATTTATTGG+TGG | + | chr8.1:20971862-20971881 | None:intergenic | 10.0% |
| !! | TAAAATTAAAATTTATTGGT+GGG | + | chr8.1:20971861-20971880 | None:intergenic | 10.0% |
| !!! | AAAATGTTTTTTCAAAAAAA+AGG | + | chr8.1:20972781-20972800 | None:intergenic | 10.0% |
| !!! | TTAATAGAAGTTATTTCATT+CGG | - | chr8.1:20972941-20972960 | MS.gene62800:intron | 15.0% |
| !!! | TTTAGTTTTATTAATGAATG+TGG | - | chr8.1:20972248-20972267 | MS.gene62800:intron | 15.0% |
| !!! | TTTTGAATATTGAAATTGTT+AGG | - | chr8.1:20973290-20973309 | MS.gene62800:intron | 15.0% |
| !! | AATTATGGGAATGAAATTAA+TGG | + | chr8.1:20971741-20971760 | None:intergenic | 20.0% |
| !! | GAATGAAATAACTTCTATTA+AGG | + | chr8.1:20972942-20972961 | None:intergenic | 20.0% |
| !! | GTCATTATTTAACTACAAAA+AGG | + | chr8.1:20972365-20972384 | None:intergenic | 20.0% |
| !! | TAAAGACTAGTAAAAAAGAT+GGG | - | chr8.1:20972514-20972533 | MS.gene62800:intron | 20.0% |
| !! | TAAATAATGACATTCAACTT+TGG | - | chr8.1:20972374-20972393 | MS.gene62800:intron | 20.0% |
| !! | TCAAATTATTTGTCTACTTA+TGG | - | chr8.1:20973936-20973955 | MS.gene62800:intron | 20.0% |
| !! | TTATTTAACTACAAAAAGGA+CGG | + | chr8.1:20972361-20972380 | None:intergenic | 20.0% |
| !! | TTTATGATGTTTCCTTTATT+TGG | - | chr8.1:20972013-20972032 | MS.gene62800:CDS | 20.0% |
| !! | TTTGGGTAAAAATTAAGAAA+TGG | + | chr8.1:20973895-20973914 | None:intergenic | 20.0% |
| !!! | ATAGTTCTGTAAATTTTACA+TGG | + | chr8.1:20972151-20972170 | None:intergenic | 20.0% |
| !!! | GTTGATTTTTGTATTTGTTT+TGG | - | chr8.1:20973622-20973641 | MS.gene62800:intron | 20.0% |
| ! | AAAACAAAGCTTAGAAATGA+AGG | + | chr8.1:20971764-20971783 | None:intergenic | 25.0% |
| ! | AAAAGAATAAGTCTACATCA+AGG | + | chr8.1:20972639-20972658 | None:intergenic | 25.0% |
| ! | AAAGACTAGTAAAAAAGATG+GGG | - | chr8.1:20972515-20972534 | MS.gene62800:intron | 25.0% |
| ! | AACAAAGTAAATAAAGACTG+CGG | + | chr8.1:20973149-20973168 | None:intergenic | 25.0% |
| ! | AATATTGAAATTGTTAGGCA+AGG | - | chr8.1:20973295-20973314 | MS.gene62800:intron | 25.0% |
| ! | AGATTTAATTACAGCAGTAA+TGG | - | chr8.1:20971643-20971662 | MS.gene62800:CDS | 25.0% |
| ! | CTAAAGACTAGTAAAAAAGA+TGG | - | chr8.1:20972513-20972532 | MS.gene62800:intron | 25.0% |
| ! | CTTAGAAATGAAGGAATTAT+GGG | + | chr8.1:20971755-20971774 | None:intergenic | 25.0% |
| ! | GAAAAATCATACAACAAACA+AGG | + | chr8.1:20972494-20972513 | None:intergenic | 25.0% |
| ! | GAATCAAAATCTCATCAATT+TGG | - | chr8.1:20974221-20974240 | MS.gene62800:intron | 25.0% |
| ! | GGGAATATAAATTTAGTAGT+TGG | - | chr8.1:20972445-20972464 | MS.gene62800:intron | 25.0% |
| ! | GTAACTAACAATCCAAATAA+AGG | + | chr8.1:20972028-20972047 | None:intergenic | 25.0% |
| ! | GTTAAGTTCAAAGTAATTGT+AGG | + | chr8.1:20973234-20973253 | None:intergenic | 25.0% |
| ! | TAGGAAATTAATTGAAGCAA+TGG | + | chr8.1:20973215-20973234 | None:intergenic | 25.0% |
| ! | TAGGATTGTTGAAATTGATT+CGG | - | chr8.1:20974106-20974125 | MS.gene62800:intron | 25.0% |
| ! | TATATTTCATTGCAGAGAAA+TGG | - | chr8.1:20973966-20973985 | MS.gene62800:intron | 25.0% |
| ! | TATTTCCTTGTCACATTTAA+TGG | - | chr8.1:20972066-20972085 | MS.gene62800:intron | 25.0% |
| ! | TCATAATTACACATACATAG+AGG | + | chr8.1:20973503-20973522 | None:intergenic | 25.0% |
| ! | TTCTCTGCAATGAAATATAA+CGG | + | chr8.1:20973965-20973984 | None:intergenic | 25.0% |
| ! | TTCTGACTGTAATAATAATC+AGG | + | chr8.1:20974185-20974204 | None:intergenic | 25.0% |
| ! | TTTACAAATGATCGTATACA+GGG | - | chr8.1:20973774-20973793 | MS.gene62800:intron | 25.0% |
| ! | TTTGCAGATATGGAATAATT+TGG | - | chr8.1:20973004-20973023 | MS.gene62800:intron | 25.0% |
| !! | CATTAGAAGTGTAATAATGA+TGG | + | chr8.1:20972615-20972634 | None:intergenic | 25.0% |
| !! | TGTACCAAAAACATTTTTCA+GGG | + | chr8.1:20971983-20972002 | None:intergenic | 25.0% |
| !! | TTGTACCAAAAACATTTTTC+AGG | + | chr8.1:20971984-20972003 | None:intergenic | 25.0% |
| !! | TTTTACAAATGATCGTATAC+AGG | - | chr8.1:20973773-20973792 | MS.gene62800:intron | 25.0% |
| !! | TTTTACATGGAACGAATTAA+TGG | + | chr8.1:20972138-20972157 | None:intergenic | 25.0% |
| !!! | AAAGAATGCAATCACTTTTA+CGG | - | chr8.1:20973406-20973425 | MS.gene62800:intron | 25.0% |
| !!! | GTATTGTACTTTTGTTTTCT+TGG | - | chr8.1:20972708-20972727 | MS.gene62800:CDS | 25.0% |
| AAGTGTAATAATGATGGTCA+AGG | + | chr8.1:20972609-20972628 | None:intergenic | 30.0% | |
| ACATCAACTATGCAGTTAAA+AGG | + | chr8.1:20973563-20973582 | None:intergenic | 30.0% | |
| ATAAATTTAGTAGTTGGCGT+TGG | - | chr8.1:20972451-20972470 | MS.gene62800:intron | 30.0% | |
| ATAATAATCAGGATCACTTG+TGG | + | chr8.1:20974174-20974193 | None:intergenic | 30.0% | |
| CACTAATAAGAACATATAGC+AGG | - | chr8.1:20974066-20974085 | MS.gene62800:intron | 30.0% | |
| CTTGTATAGGAAACATCTTA+GGG | + | chr8.1:20973108-20973127 | None:intergenic | 30.0% | |
| GCTTAGAAATGAAGGAATTA+TGG | + | chr8.1:20971756-20971775 | None:intergenic | 30.0% | |
| GGTATAACAGAATCTTGTAT+AGG | + | chr8.1:20973121-20973140 | None:intergenic | 30.0% | |
| GTAATTAAATCTGACAACCT+CGG | + | chr8.1:20971635-20971654 | None:intergenic | 30.0% | |
| GTTATTTACAGAATGTAGTG+TGG | - | chr8.1:20973166-20973185 | MS.gene62800:intron | 30.0% | |
| TAAATAAAGACTGCGGATAT+TGG | + | chr8.1:20973142-20973161 | None:intergenic | 30.0% | |
| TAATTACACATACATAGAGG+TGG | + | chr8.1:20973500-20973519 | None:intergenic | 30.0% | |
| TAGATCAAAGAACATGATGT+TGG | + | chr8.1:20973743-20973762 | None:intergenic | 30.0% | |
| TCAGTATCTCAAACATAGTA+AGG | + | chr8.1:20973256-20973275 | None:intergenic | 30.0% | |
| TCTTGTATAGGAAACATCTT+AGG | + | chr8.1:20973109-20973128 | None:intergenic | 30.0% | |
| TGATGAATCACAGAAAAAAG+AGG | + | chr8.1:20973535-20973554 | None:intergenic | 30.0% | |
| TTATATTCCCTGTAGATTCA+GGG | + | chr8.1:20972435-20972454 | None:intergenic | 30.0% | |
| TTTATATTCCCTGTAGATTC+AGG | + | chr8.1:20972436-20972455 | None:intergenic | 30.0% | |
| ! | AGGATTGTTGAAATTGATTC+GGG | - | chr8.1:20974107-20974126 | MS.gene62800:intron | 30.0% |
| ! | ATTTATTGGTGGGTAAACTT+AGG | + | chr8.1:20971851-20971870 | None:intergenic | 30.0% |
| ! | GTTACCCTGAAAAATGTTTT+TGG | - | chr8.1:20971976-20971995 | MS.gene62800:CDS | 30.0% |
| ! | TGTTTTCTTGGCTTATACTT+GGG | - | chr8.1:20972720-20972739 | MS.gene62800:CDS | 30.0% |
| ! | TTGTTTTCTTGGCTTATACT+TGG | - | chr8.1:20972719-20972738 | MS.gene62800:CDS | 30.0% |
| ! | TTTAACTGCATAGTTGATGT+AGG | - | chr8.1:20973563-20973582 | MS.gene62800:intron | 30.0% |
| ! | TTTATTGGTGGGTAAACTTA+GGG | + | chr8.1:20971850-20971869 | None:intergenic | 30.0% |
| !! | AAGAATGCAATCACTTTTAC+GGG | - | chr8.1:20973407-20973426 | MS.gene62800:intron | 30.0% |
| !! | GGTGTTATTGAATGTTTGAT+AGG | - | chr8.1:20972289-20972308 | MS.gene62800:intron | 30.0% |
| !!! | AAAGGACGGAGAATTTTTTA+TGG | + | chr8.1:20972347-20972366 | None:intergenic | 30.0% |
| !!! | AAGGACGGAGAATTTTTTAT+GGG | + | chr8.1:20972346-20972365 | None:intergenic | 30.0% |
| !!! | AGATTTTGATTCCTTTGAAG+GGG | + | chr8.1:20974213-20974232 | None:intergenic | 30.0% |
| !!! | GAGATTTTGATTCCTTTGAA+GGG | + | chr8.1:20974214-20974233 | None:intergenic | 30.0% |
| !!! | GTGTTTTGATTTGCAATTTC+TGG | - | chr8.1:20972574-20972593 | MS.gene62800:CDS | 30.0% |
| !!! | TGAGATTTTGATTCCTTTGA+AGG | + | chr8.1:20974215-20974234 | None:intergenic | 30.0% |
| !!! | TGCTCAAGTTTTGATTTTGT+GGG | - | chr8.1:20972678-20972697 | MS.gene62800:CDS | 30.0% |
| !!! | TTGCTCAAGTTTTGATTTTG+TGG | - | chr8.1:20972677-20972696 | MS.gene62800:CDS | 30.0% |
| !!! | TTTTGATTTGCAATTTCTGG+TGG | - | chr8.1:20972577-20972596 | MS.gene62800:CDS | 30.0% |
| AATGTGGAATTTGTCAACGA+AGG | - | chr8.1:20972264-20972283 | MS.gene62800:intron | 35.0% | |
| AGAAATCGAGTTCGTCAAAT+AGG | - | chr8.1:20974525-20974544 | MS.gene62800:CDS | 35.0% | |
| AGAGATTTCACTCAACTTCT+AGG | + | chr8.1:20972198-20972217 | None:intergenic | 35.0% | |
| ATCAGTTAGACGAACAATCA+TGG | - | chr8.1:20974030-20974049 | MS.gene62800:intron | 35.0% | |
| ATTAATGGCTAGCACAATAG+AGG | + | chr8.1:20972123-20972142 | None:intergenic | 35.0% | |
| ATTCAAATGTGACGTTTGCA+TGG | + | chr8.1:20973460-20973479 | None:intergenic | 35.0% | |
| GAACTCGATTTCTCATATTG+AGG | + | chr8.1:20974518-20974537 | None:intergenic | 35.0% | |
| GGTCTCAAAAAAACTGAACA+CGG | - | chr8.1:20971412-20971431 | MS.gene62800:CDS | 35.0% | |
| GTAGTAGAAGAATAGAACCA+TGG | + | chr8.1:20972318-20972337 | None:intergenic | 35.0% | |
| GTTGCAGATGATAAAAGTTG+AGG | + | chr8.1:20974338-20974357 | None:intergenic | 35.0% | |
| TATATTCCCTGTAGATTCAG+GGG | + | chr8.1:20972434-20972453 | None:intergenic | 35.0% | |
| TCAAATAGGTACTCACTCAA+TGG | - | chr8.1:20974539-20974558 | MS.gene62800:CDS | 35.0% | |
| TCGATCCATTAAATGTGACA+AGG | + | chr8.1:20972074-20972093 | None:intergenic | 35.0% | |
| TCTGCAACTTCAAAAGATGA+TGG | - | chr8.1:20974350-20974369 | MS.gene62800:CDS | 35.0% | |
| TGCACTCATAGATCTAACTT+TGG | + | chr8.1:20974483-20974502 | None:intergenic | 35.0% | |
| TTGAAATTGTTAGGCAAGGA+AGG | - | chr8.1:20973299-20973318 | MS.gene62800:intron | 35.0% | |
| TTGTTATGGACATGTTCTGT+TGG | + | chr8.1:20971538-20971557 | None:intergenic | 35.0% | |
| TTTATGTCGTCGTATTGCTA+TGG | - | chr8.1:20971954-20971973 | MS.gene62800:CDS | 35.0% | |
| TTTGACAACAAAAGAGAGCA+GGG | + | chr8.1:20972894-20972913 | None:intergenic | 35.0% | |
| ! | CACATTTAATGGATCGATGA+TGG | - | chr8.1:20972077-20972096 | MS.gene62800:intron | 35.0% |
| ! | GCACTTTCATTTTGCAGATA+TGG | - | chr8.1:20972994-20973013 | MS.gene62800:intron | 35.0% |
| ! | TAGTTGATGTAGGAGTATGA+AGG | - | chr8.1:20973573-20973592 | MS.gene62800:intron | 35.0% |
| !! | AGCATTTTGAGCATTTGCTA+CGG | + | chr8.1:20971611-20971630 | None:intergenic | 35.0% |
| !! | CCACTTCGTTAAGTTTTAGT+GGG | + | chr8.1:20974283-20974302 | None:intergenic | 35.0% |
| !! | TCATATTGAGGCCTTTGTTT+TGG | + | chr8.1:20974506-20974525 | None:intergenic | 35.0% |
| !! | TCCACTTCGTTAAGTTTTAG+TGG | + | chr8.1:20974284-20974303 | None:intergenic | 35.0% |
| !!! | CAATGCAGATGTTTTTTGTG+CGG | + | chr8.1:20974585-20974604 | None:intergenic | 35.0% |
| !!! | CAGTTTTTTTGAGACCAAGA+AGG | + | chr8.1:20971408-20971427 | None:intergenic | 35.0% |
| !!! | GCTCAAGTTTTGATTTTGTG+GGG | - | chr8.1:20972679-20972698 | MS.gene62800:CDS | 35.0% |
| !!! | TCAGATTTTTCTGGTGTTAC+TGG | + | chr8.1:20973801-20973820 | None:intergenic | 35.0% |
| AAATCTTGTCTCTCCAATGG+CGG | - | chr8.1:20973993-20974012 | MS.gene62800:intron | 40.0% | |
| AACCAAACTTCCACGAAAAG+CGG | + | chr8.1:20971713-20971732 | None:intergenic | 40.0% | |
| ACACTCGATGCACATTGTTT+GGG | + | chr8.1:20973912-20973931 | None:intergenic | 40.0% | |
| ACATGTCCATAACAACAGAC+AGG | - | chr8.1:20971543-20971562 | MS.gene62800:CDS | 40.0% | |
| ATAAGCTTGGAATGCCTGTA+GGG | - | chr8.1:20974651-20974670 | MS.gene62800:CDS | 40.0% | |
| ATGAAATCTGAGCATTCACC+TGG | - | chr8.1:20973843-20973862 | MS.gene62800:intron | 40.0% | |
| CAAGAAAATACCTTGAGTCC+AGG | + | chr8.1:20973864-20973883 | None:intergenic | 40.0% | |
| CACCTAAAGAGAAACGTAGA+TGG | - | chr8.1:20971455-20971474 | MS.gene62800:CDS | 40.0% | |
| CATCTACGTTTCTCTTTAGG+TGG | + | chr8.1:20971457-20971476 | None:intergenic | 40.0% | |
| CCCACTAAAACTTAACGAAG+TGG | - | chr8.1:20974280-20974299 | MS.gene62800:intron | 40.0% | |
| CTATGAGTGCACCAAAACAA+AGG | - | chr8.1:20974492-20974511 | MS.gene62800:CDS | 40.0% | |
| CTCCATCTACGTTTCTCTTT+AGG | + | chr8.1:20971460-20971479 | None:intergenic | 40.0% | |
| CTGTATAAGCCATGTAGCTT+GGG | + | chr8.1:20974448-20974467 | None:intergenic | 40.0% | |
| CTTTGACAACAAAAGAGAGC+AGG | + | chr8.1:20972895-20972914 | None:intergenic | 40.0% | |
| GAACATGATGTTGGCAGTAT+TGG | + | chr8.1:20973734-20973753 | None:intergenic | 40.0% | |
| GATCACTTGTGGAGTAAAAG+AGG | + | chr8.1:20974163-20974182 | None:intergenic | 40.0% | |
| GGAGTGACGAAAAAAGTGAT+AGG | - | chr8.1:20974087-20974106 | MS.gene62800:intron | 40.0% | |
| GTAATAATGATGGTCAAGGC+AGG | + | chr8.1:20972605-20972624 | None:intergenic | 40.0% | |
| GTAGAAGAATAGAACCATGG+TGG | + | chr8.1:20972315-20972334 | None:intergenic | 40.0% | |
| GTTCTATTCTTCTACTACCG+TGG | - | chr8.1:20972320-20972339 | MS.gene62800:intron | 40.0% | |
| TACACTCGATGCACATTGTT+TGG | + | chr8.1:20973913-20973932 | None:intergenic | 40.0% | |
| TCAGAATTTGACCCCTTCAA+AGG | - | chr8.1:20974199-20974218 | MS.gene62800:intron | 40.0% | |
| TCATGCTCCTAGATCTAACA+GGG | + | chr8.1:20973827-20973846 | None:intergenic | 40.0% | |
| TCCAAATCTTGTCTCTCCAA+TGG | - | chr8.1:20973990-20974009 | MS.gene62800:intron | 40.0% | |
| TCGCTTCTTGTAGGAGTAAA+AGG | + | chr8.1:20974389-20974408 | None:intergenic | 40.0% | |
| TCTGTATAAGCCATGTAGCT+TGG | + | chr8.1:20974449-20974468 | None:intergenic | 40.0% | |
| TGGAATTTGTCAACGAAGGT+AGG | - | chr8.1:20972268-20972287 | MS.gene62800:intron | 40.0% | |
| TGGGTAAACTTAGGGATTAG+TGG | + | chr8.1:20971842-20971861 | None:intergenic | 40.0% | |
| TGGTCAAAGTGTATCTTGTG+AGG | - | chr8.1:20974241-20974260 | MS.gene62800:intron | 40.0% | |
| TTCATGCTCCTAGATCTAAC+AGG | + | chr8.1:20973828-20973847 | None:intergenic | 40.0% | |
| TTGACAACAAAAGAGAGCAG+GGG | + | chr8.1:20972893-20972912 | None:intergenic | 40.0% | |
| TTTACTCCTACAAGAAGCGA+TGG | - | chr8.1:20974389-20974408 | MS.gene62800:CDS | 40.0% | |
| ! | AAAGCATCAAGATGGTTTCG+TGG | - | chr8.1:20971382-20971401 | MS.gene62800:CDS | 40.0% |
| ! | ACAGGGCTTTCAGATTTTTC+TGG | + | chr8.1:20973810-20973829 | None:intergenic | 40.0% |
| !! | AACTTTGGCCTTTTGGTTGT+GGG | - | chr8.1:20972389-20972408 | MS.gene62800:intron | 40.0% |
| !! | GACATTCAACTTTGGCCTTT+TGG | - | chr8.1:20972382-20972401 | MS.gene62800:intron | 40.0% |
| !!! | GGAGAATTTTTTATGGGCCA+CGG | + | chr8.1:20972340-20972359 | None:intergenic | 40.0% |
| AAATGCTCAAAATGCTGCCG+AGG | - | chr8.1:20971615-20971634 | MS.gene62800:CDS | 45.0% | |
| AGCCTCTAACGTAGCTTCTT+GGG | + | chr8.1:20974415-20974434 | None:intergenic | 45.0% | |
| CAAGCAAGCTTCACTAGCAA+AGG | - | chr8.1:20974605-20974624 | MS.gene62800:CDS | 45.0% | |
| CTCTGATTACCCAAGCTACA+TGG | - | chr8.1:20974436-20974455 | MS.gene62800:CDS | 45.0% | |
| CTGAAAGCCCTGTTAGATCT+AGG | - | chr8.1:20973817-20973836 | MS.gene62800:intron | 45.0% | |
| GAATGTTTGATAGGCCACCA+TGG | - | chr8.1:20972298-20972317 | MS.gene62800:intron | 45.0% | |
| GATAAGCTTGGAATGCCTGT+AGG | - | chr8.1:20974650-20974669 | MS.gene62800:CDS | 45.0% | |
| GCCATTGGAGAGACAAGATT+TGG | + | chr8.1:20973994-20974013 | None:intergenic | 45.0% | |
| GGCTTATACAGAGTCAGCAA+AGG | - | chr8.1:20974457-20974476 | MS.gene62800:CDS | 45.0% | |
| TAGCACAATAGAGGCTAAGC+TGG | + | chr8.1:20972114-20972133 | None:intergenic | 45.0% | |
| TAGCCTCTAACGTAGCTTCT+TGG | + | chr8.1:20974416-20974435 | None:intergenic | 45.0% | |
| TCCAAGCTTATCCAAACGAC+CGG | + | chr8.1:20974642-20974661 | None:intergenic | 45.0% | |
| TCTTGGCTTATACTTGGGCA+GGG | - | chr8.1:20972725-20972744 | MS.gene62800:CDS | 45.0% | |
| TGACAACAAAAGAGAGCAGG+GGG | + | chr8.1:20972892-20972911 | None:intergenic | 45.0% | |
| TTCACTAGCAAAGGCTATCC+TGG | - | chr8.1:20974614-20974633 | MS.gene62800:CDS | 45.0% | |
| TTCTGATATGTTGCCGCCAT+TGG | + | chr8.1:20974009-20974028 | None:intergenic | 45.0% | |
| TTCTTGGCTTATACTTGGGC+AGG | - | chr8.1:20972724-20972743 | MS.gene62800:CDS | 45.0% | |
| ! | AGGCACTGCGAGCATTAAAA+GGG | - | chr8.1:20973319-20973338 | MS.gene62800:intron | 45.0% |
| !! | AAGGCACTGCGAGCATTAAA+AGG | - | chr8.1:20973318-20973337 | MS.gene62800:intron | 45.0% |
| !! | ACTTTGGCCTTTTGGTTGTG+GGG | - | chr8.1:20972390-20972409 | MS.gene62800:intron | 45.0% |
| !! | CAACTTTGGCCTTTTGGTTG+TGG | - | chr8.1:20972388-20972407 | MS.gene62800:intron | 45.0% |
| !! | TAGTTGGCGTTGGTGAATGA+GGG | - | chr8.1:20972461-20972480 | MS.gene62800:intron | 45.0% |
| !!! | ATTTTATTTAAAATAATGTT+TGG | - | chr8.1:20971875-20971894 | MS.gene62800:CDS | 5.0% |
| AACTTCCACGAAAAGCGGCT+TGG | + | chr8.1:20971708-20971727 | None:intergenic | 50.0% | |
| ACAGCAGTAATGGCATCGTC+AGG | - | chr8.1:20971653-20971672 | MS.gene62800:CDS | 50.0% | |
| ACTGCGAGCATTAAAAGGGC+TGG | - | chr8.1:20973323-20973342 | MS.gene62800:intron | 50.0% | |
| AGAGGAAACGAACAGCAGAG+TGG | - | chr8.1:20973379-20973398 | MS.gene62800:intron | 50.0% | |
| AGATGGTTTCGTGGCCTTCT+TGG | - | chr8.1:20971391-20971410 | MS.gene62800:CDS | 50.0% | |
| AGCAAAGGCTATCCTGGTTC+CGG | - | chr8.1:20974620-20974639 | MS.gene62800:CDS | 50.0% | |
| CCATTGTCCCCACAACCAAA+AGG | + | chr8.1:20972400-20972419 | None:intergenic | 50.0% | |
| CGATGGCCTGTCTGTTGTTA+TGG | + | chr8.1:20971552-20971571 | None:intergenic | 50.0% | |
| CGTCAGGATACGCGAACAAT+GGG | - | chr8.1:20971669-20971688 | MS.gene62800:CDS | 50.0% | |
| CTCACTCAATGGACACGACA+TGG | - | chr8.1:20974550-20974569 | MS.gene62800:CDS | 50.0% | |
| GACAACAAAAGAGAGCAGGG+GGG | + | chr8.1:20972891-20972910 | None:intergenic | 50.0% | |
| GCAGGGAAGTTGTTGAAGGA+AGG | - | chr8.1:20972742-20972761 | MS.gene62800:intron | 50.0% | |
| GTTCTGTTGGAAACGTGACG+TGG | + | chr8.1:20971525-20971544 | None:intergenic | 50.0% | |
| TCCGGTCGTTTGGATAAGCT+TGG | - | chr8.1:20974638-20974657 | MS.gene62800:CDS | 50.0% | |
| TCGTCAGGATACGCGAACAA+TGG | - | chr8.1:20971668-20971687 | MS.gene62800:CDS | 50.0% | |
| TGAGCATTCACCTGGACTCA+AGG | - | chr8.1:20973851-20973870 | MS.gene62800:intron | 50.0% | |
| TGGACACGACATGGCAAGAT+TGG | - | chr8.1:20974559-20974578 | MS.gene62800:CDS | 50.0% | |
| TGGTGAGAGGTCACATTGAG+AGG | - | chr8.1:20973361-20973380 | MS.gene62800:intron | 50.0% | |
| TGTCCCATGAGCTGAGTCTA+GGG | - | chr8.1:20972551-20972570 | MS.gene62800:intron | 50.0% | |
| TTATCCAAACGACCGGAACC+AGG | + | chr8.1:20974635-20974654 | None:intergenic | 50.0% | |
| TTGGGCAGGGAAGTTGTTGA+AGG | - | chr8.1:20972738-20972757 | MS.gene62800:intron | 50.0% | |
| !! | AAACTCCAAGCACTGGTGAG+AGG | - | chr8.1:20973348-20973367 | MS.gene62800:intron | 50.0% |
| !! | CCTTTTGGTTGTGGGGACAA+TGG | - | chr8.1:20972397-20972416 | MS.gene62800:intron | 50.0% |
| !! | GCAATCACTTTTACGGGCAC+AGG | - | chr8.1:20973413-20973432 | MS.gene62800:intron | 50.0% |
| !! | GTAGTTGGCGTTGGTGAATG+AGG | - | chr8.1:20972460-20972479 | MS.gene62800:intron | 50.0% |
| !! | TAGTGTGGCTCTGAGTGCTA+CGG | - | chr8.1:20973181-20973200 | MS.gene62800:intron | 50.0% |
| !!! | AAGATCCAAGCCGCTTTTCG+TGG | - | chr8.1:20971700-20971719 | MS.gene62800:CDS | 50.0% |
| !!! | AGCCGCTTTTCGTGGAAGTT+TGG | - | chr8.1:20971708-20971727 | MS.gene62800:CDS | 50.0% |
| ACACCCCTAGACTCAGCTCA+TGG | + | chr8.1:20972558-20972577 | None:intergenic | 55.0% | |
| CACCAGCCCCTGAATCTACA+GGG | - | chr8.1:20972425-20972444 | MS.gene62800:intron | 55.0% | |
| CACCCCTAGACTCAGCTCAT+GGG | + | chr8.1:20972557-20972576 | None:intergenic | 55.0% | |
| CTATCCTGGTTCCGGTCGTT+TGG | - | chr8.1:20974628-20974647 | MS.gene62800:CDS | 55.0% | |
| CTTGGGCCATCGCTTCTTGT+AGG | + | chr8.1:20974398-20974417 | None:intergenic | 55.0% | |
| GCTGGTGAAACTCCAAGCAC+TGG | - | chr8.1:20973341-20973360 | MS.gene62800:intron | 55.0% | |
| GGCCCAAGAAGCTACGTTAG+AGG | - | chr8.1:20974410-20974429 | MS.gene62800:CDS | 55.0% | |
| GTCCCATGAGCTGAGTCTAG+GGG | - | chr8.1:20972552-20972571 | MS.gene62800:intron | 55.0% | |
| GTGTCCCATGAGCTGAGTCT+AGG | - | chr8.1:20972550-20972569 | MS.gene62800:intron | 55.0% | |
| TGTGACCTCTCACCAGTGCT+TGG | + | chr8.1:20973356-20973375 | None:intergenic | 55.0% | |
| TTCCCTGTAGATTCAGGGGC+TGG | + | chr8.1:20972430-20972449 | None:intergenic | 55.0% | |
| !! | TGGCGTTGGTGAATGAGGGT+GGG | - | chr8.1:20972465-20972484 | MS.gene62800:intron | 55.0% |
| !! | TTGGCGTTGGTGAATGAGGG+TGG | - | chr8.1:20972464-20972483 | MS.gene62800:intron | 55.0% |
| CAACAGACAGGCCATCGCTG+TGG | - | chr8.1:20971555-20971574 | MS.gene62800:CDS | 60.0% | |
| CCACCAGCCCCTGAATCTAC+AGG | - | chr8.1:20972424-20972443 | MS.gene62800:intron | 60.0% | |
| CCTGTAGATTCAGGGGCTGG+TGG | + | chr8.1:20972427-20972446 | None:intergenic | 60.0% | |
| ! | CGTTGGTGAATGAGGGTGGG+TGG | - | chr8.1:20972468-20972487 | MS.gene62800:intron | 60.0% |
| ! | GTAGATTCAGGGGCTGGTGG+TGG | + | chr8.1:20972424-20972443 | None:intergenic | 60.0% |
| CATCGCTGTGGCAGCTGCCA+CGG | - | chr8.1:20971567-20971586 | MS.gene62800:CDS | 65.0% | |
| CGTGGCAGCTGCCACAGCGA+TGG | + | chr8.1:20971569-20971588 | None:intergenic | 70.0% | |
| TGTGGCAGCTGCCACGGCAG+CGG | - | chr8.1:20971573-20971592 | MS.gene62800:CDS | 70.0% | |
| AACCTCCGCAGCCGCTGCCG+TGG | + | chr8.1:20971587-20971606 | None:intergenic | 75.0% | |
| AGCTGCCACGGCAGCGGCTG+CGG | - | chr8.1:20971579-20971598 | MS.gene62800:CDS | 75.0% | |
| ! | TGCCACGGCAGCGGCTGCGG+AGG | - | chr8.1:20971582-20971601 | MS.gene62800:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 20971376 | 20974685 | 20971376 | ID=MS.gene62800 |
| chr8.1 | mRNA | 20971376 | 20974685 | 20971376 | ID=MS.gene62800.t1;Parent=MS.gene62800 |
| chr8.1 | exon | 20974332 | 20974685 | 20974332 | ID=MS.gene62800.t1.exon1;Parent=MS.gene62800.t1 |
| chr8.1 | CDS | 20974332 | 20974685 | 20974332 | ID=cds.MS.gene62800.t1;Parent=MS.gene62800.t1 |
| chr8.1 | exon | 20972555 | 20972749 | 20972555 | ID=MS.gene62800.t1.exon2;Parent=MS.gene62800.t1 |
| chr8.1 | CDS | 20972555 | 20972749 | 20972555 | ID=cds.MS.gene62800.t1;Parent=MS.gene62800.t1 |
| chr8.1 | exon | 20972189 | 20972266 | 20972189 | ID=MS.gene62800.t1.exon3;Parent=MS.gene62800.t1 |
| chr8.1 | CDS | 20972189 | 20972266 | 20972189 | ID=cds.MS.gene62800.t1;Parent=MS.gene62800.t1 |
| chr8.1 | exon | 20971376 | 20972080 | 20971376 | ID=MS.gene62800.t1.exon4;Parent=MS.gene62800.t1 |
| chr8.1 | CDS | 20971376 | 20972080 | 20971376 | ID=cds.MS.gene62800.t1;Parent=MS.gene62800.t1 |
| Gene Sequence |
| Protein sequence |
