Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70461.t1 | XP_024635775.1 | 96 | 704 | 28 | 0 | 1 | 704 | 5 | 708 | 0.00E+00 | 1328.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70461.t1 | B9DGY1 | 76.0 | 688 | 144 | 7 | 23 | 704 | 23 | 695 | 1.8e-298 | 1026.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70461.t1 | G7J8V4 | 96.0 | 704 | 28 | 0 | 1 | 704 | 5 | 708 | 0.0e+00 | 1328.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049633 | MS.gene70461 | 0.842577 | 2.38E-58 | -1.69E-46 |
| MS.gene049757 | MS.gene70461 | 0.814079 | 1.85E-51 | -1.69E-46 |
| MS.gene050170 | MS.gene70461 | 0.911463 | 5.91E-83 | -1.69E-46 |
| MS.gene050323 | MS.gene70461 | 0.861612 | 9.08E-64 | -1.69E-46 |
| MS.gene050338 | MS.gene70461 | -0.817798 | 2.73E-52 | -1.69E-46 |
| MS.gene050496 | MS.gene70461 | 0.872477 | 3.09E-67 | -1.69E-46 |
| MS.gene050502 | MS.gene70461 | 0.810692 | 1.02E-50 | -1.69E-46 |
| MS.gene050553 | MS.gene70461 | 0.835277 | 1.84E-56 | -1.69E-46 |
| MS.gene050697 | MS.gene70461 | 0.878379 | 2.94E-69 | -1.69E-46 |
| MS.gene05080 | MS.gene70461 | 0.819832 | 9.44E-53 | -1.69E-46 |
| MS.gene05081 | MS.gene70461 | 0.805123 | 1.55E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene70461 | 0.852573 | 4.22E-61 | -1.69E-46 |
| MS.gene050871 | MS.gene70461 | 0.850029 | 2.21E-60 | -1.69E-46 |
| MS.gene050904 | MS.gene70461 | 0.862831 | 3.83E-64 | -1.69E-46 |
| MS.gene051268 | MS.gene70461 | 0.826822 | 2.20E-54 | -1.69E-46 |
| MS.gene051317 | MS.gene70461 | 0.81783 | 2.69E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene70461 | -0.80891 | 2.46E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene70461 | 0.843821 | 1.11E-58 | -1.69E-46 |
| MS.gene051941 | MS.gene70461 | 0.851442 | 8.85E-61 | -1.69E-46 |
| MS.gene052066 | MS.gene70461 | 0.816988 | 4.16E-52 | -1.69E-46 |
| MS.gene052100 | MS.gene70461 | 0.834472 | 2.94E-56 | -1.69E-46 |
| MS.gene052346 | MS.gene70461 | 0.803768 | 2.98E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene70461 | 0.83753 | 4.92E-57 | -1.69E-46 |
| MS.gene053097 | MS.gene70461 | -0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene70461 | 0.802609 | 5.17E-49 | -1.69E-46 |
| MS.gene053479 | MS.gene70461 | 0.831912 | 1.28E-55 | -1.69E-46 |
| MS.gene053824 | MS.gene70461 | 0.856709 | 2.68E-62 | -1.69E-46 |
| MS.gene054344 | MS.gene70461 | 0.841128 | 5.73E-58 | -1.69E-46 |
| MS.gene05470 | MS.gene70461 | 0.818116 | 2.32E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene70461 | -0.804578 | 2.02E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene70461 | 0.837121 | 6.27E-57 | -1.69E-46 |
| MS.gene055224 | MS.gene70461 | 0.818068 | 2.38E-52 | -1.69E-46 |
| MS.gene055577 | MS.gene70461 | 0.811665 | 6.25E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene70461 | 0.845627 | 3.61E-59 | -1.69E-46 |
| MS.gene055744 | MS.gene70461 | 0.834628 | 2.68E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene70461 | 0.840481 | 8.47E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene70461 | 0.84707 | 1.46E-59 | -1.69E-46 |
| MS.gene055751 | MS.gene70461 | 0.850737 | 1.40E-60 | -1.69E-46 |
| MS.gene05589 | MS.gene70461 | 0.897347 | 1.54E-76 | -1.69E-46 |
| MS.gene056166 | MS.gene70461 | 0.802761 | 4.81E-49 | -1.69E-46 |
| MS.gene056266 | MS.gene70461 | 0.847169 | 1.37E-59 | -1.69E-46 |
| MS.gene056283 | MS.gene70461 | 0.846359 | 2.28E-59 | -1.69E-46 |
| MS.gene056387 | MS.gene70461 | 0.890787 | 7.18E-74 | -1.69E-46 |
| MS.gene056504 | MS.gene70461 | 0.863593 | 2.23E-64 | -1.69E-46 |
| MS.gene056508 | MS.gene70461 | 0.802239 | 6.17E-49 | -1.69E-46 |
| MS.gene056618 | MS.gene70461 | -0.817963 | 2.51E-52 | -1.69E-46 |
| MS.gene056694 | MS.gene70461 | -0.808683 | 2.75E-50 | -1.69E-46 |
| MS.gene057019 | MS.gene70461 | 0.829333 | 5.46E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene70461 | 0.801873 | 7.33E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene70461 | 0.802689 | 4.98E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene70461 | -0.820813 | 5.62E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene70461 | 0.829605 | 4.69E-55 | -1.69E-46 |
| MS.gene058382 | MS.gene70461 | -0.802521 | 5.39E-49 | -1.69E-46 |
| MS.gene058448 | MS.gene70461 | 0.862426 | 5.11E-64 | -1.69E-46 |
| MS.gene058838 | MS.gene70461 | 0.82488 | 6.35E-54 | -1.69E-46 |
| MS.gene059023 | MS.gene70461 | 0.831459 | 1.65E-55 | -1.69E-46 |
| MS.gene059667 | MS.gene70461 | 0.822551 | 2.23E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene70461 | 0.811406 | 7.11E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene70461 | 0.824821 | 6.56E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene70461 | 0.880582 | 4.87E-70 | -1.69E-46 |
| MS.gene06027 | MS.gene70461 | 0.826541 | 2.56E-54 | -1.69E-46 |
| MS.gene060372 | MS.gene70461 | 0.812388 | 4.35E-51 | -1.69E-46 |
| MS.gene06042 | MS.gene70461 | -0.802101 | 6.58E-49 | -1.69E-46 |
| MS.gene060593 | MS.gene70461 | -0.809632 | 1.72E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene70461 | 0.823823 | 1.13E-53 | -1.69E-46 |
| MS.gene060778 | MS.gene70461 | 0.849681 | 2.77E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene70461 | 0.829574 | 4.77E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene70461 | 0.876499 | 1.33E-68 | -1.69E-46 |
| MS.gene061044 | MS.gene70461 | -0.842887 | 1.96E-58 | -1.69E-46 |
| MS.gene061218 | MS.gene70461 | 0.840557 | 8.10E-58 | -1.69E-46 |
| MS.gene061231 | MS.gene70461 | 0.81691 | 4.33E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70461.t1 | MTR_3g082750 | 97.585 | 704 | 17 | 0 | 1 | 704 | 5 | 708 | 0.0 | 1415 |
| MS.gene70461.t1 | MTR_3g094740 | 46.281 | 605 | 284 | 9 | 134 | 704 | 143 | 740 | 0.0 | 538 |
| MS.gene70461.t1 | MTR_8g091710 | 46.382 | 608 | 285 | 9 | 131 | 704 | 131 | 731 | 0.0 | 537 |
| MS.gene70461.t1 | MTR_3g094740 | 48.142 | 565 | 252 | 9 | 134 | 664 | 143 | 700 | 1.20e-179 | 530 |
| MS.gene70461.t1 | MTR_3g105760 | 37.366 | 372 | 216 | 4 | 212 | 571 | 136 | 502 | 1.95e-73 | 251 |
| MS.gene70461.t1 | MTR_4g026450 | 35.128 | 390 | 240 | 5 | 193 | 576 | 148 | 530 | 1.23e-69 | 241 |
| MS.gene70461.t1 | MTR_6g038750 | 35.904 | 376 | 228 | 4 | 197 | 571 | 129 | 492 | 1.24e-67 | 236 |
| MS.gene70461.t1 | MTR_0053s0030 | 30.196 | 510 | 333 | 8 | 69 | 576 | 30 | 518 | 1.12e-66 | 233 |
| MS.gene70461.t1 | MTR_1g046620 | 33.638 | 437 | 264 | 8 | 146 | 576 | 142 | 558 | 7.16e-64 | 227 |
| MS.gene70461.t1 | MTR_1g009860 | 34.109 | 387 | 241 | 5 | 197 | 576 | 131 | 510 | 3.13e-59 | 211 |
| MS.gene70461.t1 | MTR_1g009860 | 34.109 | 387 | 241 | 5 | 197 | 576 | 131 | 510 | 9.13e-59 | 210 |
| MS.gene70461.t1 | MTR_1g095480 | 30.649 | 385 | 251 | 4 | 200 | 571 | 203 | 584 | 8.59e-51 | 187 |
| MS.gene70461.t1 | MTR_1g095480 | 29.481 | 424 | 283 | 4 | 200 | 610 | 203 | 623 | 1.57e-50 | 189 |
| MS.gene70461.t1 | MTR_1g008980 | 26.897 | 435 | 283 | 9 | 164 | 576 | 13 | 434 | 2.52e-43 | 168 |
| MS.gene70461.t1 | MTR_4g104070 | 27.214 | 463 | 268 | 13 | 150 | 576 | 26 | 455 | 4.42e-39 | 151 |
| MS.gene70461.t1 | MTR_8g464860 | 31.003 | 329 | 191 | 8 | 194 | 493 | 203 | 524 | 2.66e-38 | 151 |
| MS.gene70461.t1 | MTR_5g077080 | 30.072 | 276 | 178 | 5 | 211 | 479 | 98 | 365 | 1.43e-37 | 148 |
| MS.gene70461.t1 | MTR_3g070410 | 27.073 | 410 | 261 | 8 | 181 | 559 | 69 | 471 | 7.77e-37 | 147 |
| MS.gene70461.t1 | MTR_4g091510 | 29.909 | 331 | 200 | 8 | 199 | 502 | 212 | 537 | 1.13e-34 | 140 |
| MS.gene70461.t1 | MTR_4g091510 | 29.909 | 331 | 200 | 8 | 199 | 502 | 217 | 542 | 1.45e-34 | 140 |
| MS.gene70461.t1 | MTR_5g068050 | 25.126 | 398 | 263 | 6 | 199 | 566 | 127 | 519 | 1.41e-32 | 133 |
| MS.gene70461.t1 | MTR_2g011640 | 29.206 | 315 | 194 | 7 | 199 | 489 | 265 | 574 | 8.07e-32 | 132 |
| MS.gene70461.t1 | MTR_1g085610 | 28.947 | 304 | 192 | 8 | 195 | 488 | 225 | 514 | 4.28e-22 | 101 |
| MS.gene70461.t1 | MTR_0224s0030 | 24.510 | 204 | 154 | 0 | 407 | 610 | 36 | 239 | 1.15e-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70461.t1 | AT3G07700 | 74.752 | 705 | 152 | 8 | 6 | 704 | 11 | 695 | 0.0 | 1075 |
| MS.gene70461.t1 | AT3G07700 | 74.752 | 705 | 152 | 8 | 6 | 704 | 11 | 695 | 0.0 | 1075 |
| MS.gene70461.t1 | AT3G07700 | 74.752 | 705 | 152 | 8 | 6 | 704 | 11 | 695 | 0.0 | 1075 |
| MS.gene70461.t1 | AT3G07700 | 71.583 | 739 | 156 | 10 | 1 | 704 | 5 | 724 | 0.0 | 1058 |
| MS.gene70461.t1 | AT5G64940 | 45.634 | 607 | 287 | 8 | 134 | 704 | 158 | 757 | 5.72e-179 | 529 |
| MS.gene70461.t1 | AT5G64940 | 45.634 | 607 | 287 | 8 | 134 | 704 | 158 | 757 | 5.72e-179 | 529 |
| MS.gene70461.t1 | AT5G24970 | 35.088 | 399 | 231 | 4 | 194 | 571 | 134 | 525 | 6.21e-73 | 251 |
| MS.gene70461.t1 | AT5G24970 | 35.000 | 400 | 232 | 4 | 194 | 572 | 173 | 565 | 1.83e-72 | 250 |
| MS.gene70461.t1 | AT1G79600 | 34.815 | 405 | 251 | 5 | 182 | 576 | 124 | 525 | 7.14e-70 | 242 |
| MS.gene70461.t1 | AT1G71810 | 36.170 | 376 | 227 | 4 | 197 | 571 | 120 | 483 | 2.70e-69 | 240 |
| MS.gene70461.t1 | AT5G24970 | 34.336 | 399 | 231 | 5 | 194 | 571 | 134 | 522 | 9.33e-69 | 239 |
| MS.gene70461.t1 | AT3G24190 | 34.430 | 395 | 244 | 6 | 185 | 576 | 184 | 566 | 2.35e-61 | 220 |
| MS.gene70461.t1 | AT4G31390 | 33.333 | 387 | 244 | 5 | 197 | 576 | 167 | 546 | 5.54e-57 | 206 |
| MS.gene70461.t1 | AT2G39190 | 30.380 | 395 | 252 | 4 | 200 | 576 | 202 | 591 | 7.43e-51 | 190 |
| MS.gene70461.t1 | AT4G31390 | 32.768 | 354 | 224 | 5 | 230 | 576 | 1 | 347 | 1.94e-48 | 178 |
| MS.gene70461.t1 | AT4G31390 | 31.266 | 387 | 227 | 6 | 197 | 576 | 167 | 521 | 4.41e-47 | 177 |
| MS.gene70461.t1 | AT4G24810 | 27.766 | 461 | 302 | 10 | 142 | 585 | 15 | 461 | 2.57e-42 | 160 |
| MS.gene70461.t1 | AT5G50330 | 28.761 | 452 | 286 | 10 | 148 | 576 | 14 | 452 | 7.01e-42 | 159 |
| MS.gene70461.t1 | AT5G24810 | 27.706 | 462 | 280 | 11 | 164 | 584 | 60 | 508 | 4.67e-41 | 162 |
| MS.gene70461.t1 | AT4G24810 | 29.008 | 393 | 259 | 7 | 207 | 585 | 32 | 418 | 6.34e-41 | 155 |
| MS.gene70461.t1 | AT4G24810 | 29.008 | 393 | 259 | 7 | 207 | 585 | 32 | 418 | 6.34e-41 | 155 |
| MS.gene70461.t1 | AT1G65950 | 30.657 | 274 | 177 | 6 | 211 | 478 | 113 | 379 | 3.92e-39 | 151 |
| MS.gene70461.t1 | AT4G24810 | 28.750 | 400 | 258 | 8 | 207 | 585 | 32 | 425 | 5.23e-39 | 150 |
| MS.gene70461.t1 | AT1G65950 | 30.147 | 272 | 181 | 5 | 211 | 478 | 113 | 379 | 2.84e-38 | 150 |
| MS.gene70461.t1 | AT4G24810 | 31.724 | 290 | 179 | 6 | 207 | 482 | 32 | 316 | 1.50e-37 | 143 |
| MS.gene70461.t1 | AT5G24810 | 26.369 | 493 | 278 | 13 | 164 | 584 | 60 | 539 | 3.58e-37 | 150 |
| MS.gene70461.t1 | AT4G24810 | 33.209 | 268 | 160 | 6 | 207 | 460 | 32 | 294 | 1.44e-36 | 140 |
| MS.gene70461.t1 | AT5G50330 | 26.829 | 451 | 280 | 10 | 148 | 576 | 14 | 436 | 5.17e-34 | 136 |
| MS.gene70461.t1 | AT5G05200 | 24.879 | 414 | 276 | 6 | 182 | 566 | 113 | 520 | 5.32e-34 | 137 |
| MS.gene70461.t1 | AT2G40090 | 28.617 | 311 | 200 | 5 | 195 | 487 | 87 | 393 | 1.92e-32 | 132 |
| MS.gene70461.t1 | AT1G11390 | 28.125 | 352 | 216 | 9 | 183 | 504 | 198 | 542 | 6.08e-32 | 132 |
| MS.gene70461.t1 | AT1G61640 | 28.267 | 329 | 202 | 10 | 200 | 502 | 213 | 533 | 1.13e-28 | 122 |
| MS.gene70461.t1 | AT1G61640 | 28.267 | 329 | 202 | 10 | 200 | 502 | 213 | 533 | 1.17e-28 | 122 |
| MS.gene70461.t1 | AT2G39190 | 36.250 | 160 | 99 | 1 | 200 | 359 | 202 | 358 | 1.56e-22 | 100 |
| MS.gene70461.t1 | AT4G01660 | 27.778 | 306 | 211 | 5 | 194 | 497 | 222 | 519 | 3.18e-22 | 102 |
| MS.gene70461.t1 | AT1G61640 | 30.049 | 203 | 124 | 6 | 200 | 390 | 213 | 409 | 7.42e-18 | 87.4 |
Find 150 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCTTGTAGCTGGTTTAT+TGG | 0.177430 | 3.1:+66544268 | MS.gene70461:intron |
| CTCTTTAAACAATTCATTAA+TGG | 0.177743 | 3.1:-66543144 | None:intergenic |
| CATTTATATAATCAATTTCT+TGG | 0.199717 | 3.1:-66544001 | None:intergenic |
| TACAGGAACTTCTAGATATA+AGG | 0.236116 | 3.1:+66546513 | MS.gene70461:intron |
| GGAGGAACCTTTCTAAATAT+TGG | 0.238190 | 3.1:+66547086 | MS.gene70461:CDS |
| GGCTTTATTGAGAGTGAATT+AGG | 0.254061 | 3.1:+66543116 | MS.gene70461:CDS |
| ACCCTTGTAGCTGGTTTATT+GGG | 0.269755 | 3.1:+66544269 | MS.gene70461:intron |
| GGCTCAAAGCAAGCTGTTAA+TGG | 0.283062 | 3.1:+66542379 | MS.gene70461:CDS |
| ATTCAATGCCTTATTGATCT+TGG | 0.300157 | 3.1:+66545252 | MS.gene70461:CDS |
| TATTGAGGCGTACTTGATTC+AGG | 0.305517 | 3.1:+66544550 | MS.gene70461:CDS |
| GAAATGCCGCCATCAAAATT+AGG | 0.325630 | 3.1:+66542268 | MS.gene70461:CDS |
| TCTTTAAACAATTCATTAAT+GGG | 0.331071 | 3.1:-66543143 | None:intergenic |
| GCTACTATGTACACGGTATT+AGG | 0.336158 | 3.1:+66547065 | MS.gene70461:CDS |
| AGCTGTTAATGGAGCAAGTT+TGG | 0.341642 | 3.1:+66542390 | MS.gene70461:CDS |
| CAATGCAAAATGGGCATATC+CGG | 0.342054 | 3.1:+66542609 | MS.gene70461:CDS |
| GAGCAGACATTGTCTGCAAT+TGG | 0.346799 | 3.1:+66545466 | MS.gene70461:CDS |
| TTCGTTGTCTTTGTCAATGC+TGG | 0.352992 | 3.1:-66542430 | None:intergenic |
| CCAATGAAAATTACAGTTCC+TGG | 0.383016 | 3.1:+66542527 | MS.gene70461:CDS |
| TTCAAGTGGTGGAAGTTCAT+TGG | 0.384033 | 3.1:-66542464 | None:intergenic |
| TAATGGTAGAGCTGTTAAAA+TGG | 0.385147 | 3.1:+66542294 | MS.gene70461:CDS |
| TCAATTATTTATTACGACTT+TGG | 0.385780 | 3.1:+66544744 | MS.gene70461:CDS |
| CCATCAAAATTAGGTAATAA+TGG | 0.389209 | 3.1:+66542277 | MS.gene70461:CDS |
| TTTGGCATCCTTCTCATAAA+CGG | 0.395475 | 3.1:-66544823 | None:intergenic |
| ACAGATCCCCGGTGGGTTGG+AGG | 0.397963 | 3.1:-66545278 | None:intergenic |
| AGCAGACATTGTCTGCAATT+GGG | 0.399926 | 3.1:+66545467 | MS.gene70461:CDS |
| TCTATTTCCCCGTGAATTTG+TGG | 0.401899 | 3.1:+66542920 | MS.gene70461:CDS |
| ATCTTCACAAATGAGAAATC+TGG | 0.404363 | 3.1:-66546392 | None:intergenic |
| TTTCAGAGAAGTGAAACTTT+TGG | 0.408412 | 3.1:+66543745 | MS.gene70461:CDS |
| TTGGTGGTCCAACTAGAGAT+TGG | 0.412828 | 3.1:+66543764 | MS.gene70461:CDS |
| ATAACAAAGGTGAAGGTTGA+TGG | 0.416877 | 3.1:-66545622 | None:intergenic |
| CGAAGATCACTAGACAATCT+TGG | 0.421184 | 3.1:+66542136 | MS.gene70461:CDS |
| CCGAGACTTGCAGCAGCAAT+TGG | 0.421258 | 3.1:-66543179 | None:intergenic |
| ACATCAATAGCAAGATTTCC+AGG | 0.425680 | 3.1:-66544714 | None:intergenic |
| GGAAGTTCATTGGAGATTGT+AGG | 0.432975 | 3.1:-66542454 | None:intergenic |
| GACAATGTCTGCTCTTGATC+TGG | 0.434915 | 3.1:-66545457 | None:intergenic |
| ATTGACACCAATATTTAGAA+AGG | 0.438522 | 3.1:-66547093 | None:intergenic |
| TAGCACAAGACCAGCCATTC+CGG | 0.440262 | 3.1:+66545596 | MS.gene70461:CDS |
| TTTCACGCTGATCCACATCC+TGG | 0.442896 | 3.1:+66544696 | MS.gene70461:CDS |
| TTGCAAAAGTTTGATTGCCT+TGG | 0.444011 | 3.1:-66547124 | None:intergenic |
| GAAGGAGGAAAACGGCTTCA+TGG | 0.444251 | 3.1:+66542826 | MS.gene70461:CDS |
| TGTCCAAGTTTAATAAAAGT+TGG | 0.444282 | 3.1:-66542876 | None:intergenic |
| TCTATTCTTTGAACTCTCAA+TGG | 0.445983 | 3.1:-66546763 | None:intergenic |
| GAAATTGATTATATAAATGA+AGG | 0.452977 | 3.1:+66544005 | MS.gene70461:CDS |
| TTATGAGAAGGATGCCAAAA+AGG | 0.452978 | 3.1:+66544827 | MS.gene70461:CDS |
| AGGTGAAGGTTGATGGAAAC+CGG | 0.458214 | 3.1:-66545615 | None:intergenic |
| GGAGGGCTCCAAGATCAATA+AGG | 0.466597 | 3.1:-66545260 | None:intergenic |
| TATTACGACTTTGGCATGAT+GGG | 0.468315 | 3.1:+66544753 | MS.gene70461:CDS |
| CCAATTGCTGCTGCAAGTCT+CGG | 0.469478 | 3.1:+66543179 | MS.gene70461:CDS |
| GGATGAACTCGCAAAATTGC+AGG | 0.471584 | 3.1:+66542941 | MS.gene70461:CDS |
| TGCTGCTGCAAGTCTCGGTC+AGG | 0.471750 | 3.1:+66543184 | MS.gene70461:CDS |
| CCACAGGGCCACAACTCGTC+GGG | 0.471887 | 3.1:+66546546 | MS.gene70461:CDS |
| GTGTTACAGATATTGAAAAC+AGG | 0.473505 | 3.1:+66544669 | MS.gene70461:intron |
| CCTCAGATGAAGGCTTCAGT+TGG | 0.474873 | 3.1:+66542503 | MS.gene70461:CDS |
| TTGGGATTATACAGCAATGA+AGG | 0.474937 | 3.1:+66544287 | MS.gene70461:CDS |
| CGAGTTCATCCACAAATTCA+CGG | 0.480904 | 3.1:-66542929 | None:intergenic |
| TTTGCAAATGGATCGTTTGT+TGG | 0.485361 | 3.1:+66547140 | MS.gene70461:CDS |
| TCTGCTCTTGATCTGGTGAC+TGG | 0.488384 | 3.1:-66545450 | None:intergenic |
| CAGATCCCCGGTGGGTTGGA+GGG | 0.491136 | 3.1:-66545277 | None:intergenic |
| ATTCTTACGGTCTATGCAAA+GGG | 0.493150 | 3.1:+66547290 | MS.gene70461:CDS |
| TTTGTGAAGCAAGTTGAGGC+AGG | 0.494683 | 3.1:+66546790 | MS.gene70461:CDS |
| GTTATCAAAGTTCAAAGGCC+TGG | 0.495296 | 3.1:+66543242 | MS.gene70461:CDS |
| GGAAAACGGCTTCATGGCTA+AGG | 0.498904 | 3.1:+66542832 | MS.gene70461:CDS |
| GATAAGCAGAAGGAGGAAAA+CGG | 0.502499 | 3.1:+66542818 | MS.gene70461:intron |
| TAAAGCCTCTTGCTTTCTGT+GGG | 0.502807 | 3.1:-66543100 | None:intergenic |
| GCTATCTGCCCGACGAGTTG+TGG | 0.508655 | 3.1:-66546554 | None:intergenic |
| TTGATGGAAACCGGAATGGC+TGG | 0.509916 | 3.1:-66545606 | None:intergenic |
| ATGAAGGGAAGAATGCTGAT+AGG | 0.512805 | 3.1:+66544021 | MS.gene70461:CDS |
| CTGACAGATCCCCGGTGGGT+TGG | 0.513021 | 3.1:-66545281 | None:intergenic |
| TGGTAAATTTCGTAGATTTG+TGG | 0.513813 | 3.1:+66542228 | MS.gene70461:CDS |
| CTTGGAGCCCTCCAACCCAC+CGG | 0.514456 | 3.1:+66545270 | MS.gene70461:CDS |
| ACAGTCTGAACCTGTGCATA+GGG | 0.514489 | 3.1:-66546422 | None:intergenic |
| AATCTCATCACGTGCTATTG+AGG | 0.516579 | 3.1:+66544535 | MS.gene70461:CDS |
| TTGGAGCCCTCCAACCCACC+GGG | 0.517854 | 3.1:+66545271 | MS.gene70461:CDS |
| AATGGATCGTTTGTTGGTGC+AGG | 0.519200 | 3.1:+66547146 | MS.gene70461:CDS |
| GCTTTCTGTGGGGAGAAAGC+AGG | 0.519217 | 3.1:-66543089 | None:intergenic |
| CCGACGAGTTGTGGCCCTGT+GGG | 0.519502 | 3.1:-66546545 | None:intergenic |
| ATAGCAAGATTTCCAGGATG+TGG | 0.519629 | 3.1:-66544708 | None:intergenic |
| GGCAGAGATCAATTGATGTA+TGG | 0.520886 | 3.1:+66542548 | MS.gene70461:CDS |
| GTCTCCACTTTATTCTCTGA+CGG | 0.521771 | 3.1:-66542349 | None:intergenic |
| ATTGAGAGTTCAAAGAATAG+AGG | 0.523885 | 3.1:+66546765 | MS.gene70461:CDS |
| CTCAGATGAAGGCTTCAGTT+GGG | 0.526088 | 3.1:+66542504 | MS.gene70461:CDS |
| ATACCGATCCAATCTCTAGT+TGG | 0.528498 | 3.1:-66543772 | None:intergenic |
| TTATTGTAACAATATAGAAT+CGG | 0.529878 | 3.1:+66542105 | MS.gene70461:CDS |
| GAGTTCATCCACAAATTCAC+GGG | 0.530269 | 3.1:-66542928 | None:intergenic |
| TTATTACGACTTTGGCATGA+TGG | 0.530731 | 3.1:+66544752 | MS.gene70461:CDS |
| TAAATTTCGTAGATTTGTGG+TGG | 0.532222 | 3.1:+66542231 | MS.gene70461:CDS |
| TTGACCTTGGAGTATGTACC+AGG | 0.532309 | 3.1:+66544312 | MS.gene70461:CDS |
| GCAGACATTGTCTGCAATTG+GGG | 0.533585 | 3.1:+66545468 | MS.gene70461:CDS |
| GTCTTTGTCAATGCTGGAGT+AGG | 0.534650 | 3.1:-66542424 | None:intergenic |
| ATAAAGCCTCTTGCTTTCTG+TGG | 0.536314 | 3.1:-66543101 | None:intergenic |
| AACTCTCAATGGCATTGACA+TGG | 0.538554 | 3.1:-66546752 | None:intergenic |
| GGTGTCAATTTGACTAGCCA+AGG | 0.544223 | 3.1:+66547107 | MS.gene70461:CDS |
| TTCTCCCCACAGAAAGCAAG+AGG | 0.547830 | 3.1:+66543095 | MS.gene70461:CDS |
| TGCTCTAATAACAAAGGTGA+AGG | 0.550545 | 3.1:-66545629 | None:intergenic |
| AATAAAGTGGAGACAGTCAA+TGG | 0.556563 | 3.1:+66542358 | MS.gene70461:CDS |
| AGCAATGAAGGTGTTGACCT+TGG | 0.557273 | 3.1:+66544299 | MS.gene70461:CDS |
| CCAACTGAAGCCTTCATCTG+AGG | 0.557528 | 3.1:-66542503 | None:intergenic |
| ATAAATTGTCAAAGAATGAA+AGG | 0.558325 | 3.1:+66542182 | MS.gene70461:CDS |
| CAACTGAAGCCTTCATCTGA+GGG | 0.559152 | 3.1:-66542502 | None:intergenic |
| AATGCAAAATGGGCATATCC+GGG | 0.559374 | 3.1:+66542610 | MS.gene70461:CDS |
| TATTCTTACGGTCTATGCAA+AGG | 0.560981 | 3.1:+66547289 | MS.gene70461:CDS |
| GACACCGTCAGAGAATAAAG+TGG | 0.563292 | 3.1:+66542345 | MS.gene70461:CDS |
| GAAAGCGACAGTGTTACAAA+TGG | 0.563568 | 3.1:+66547043 | MS.gene70461:CDS |
| GACAGTCTGAACCTGTGCAT+AGG | 0.566917 | 3.1:-66546423 | None:intergenic |
| CAGTTCGAGCAATCTCTCAC+GGG | 0.571404 | 3.1:-66544793 | None:intergenic |
| ATTACGACTTTGGCATGATG+GGG | 0.574785 | 3.1:+66544754 | MS.gene70461:CDS |
| TAGAGCTGTTAAAATGGTAC+CGG | 0.578175 | 3.1:+66542300 | MS.gene70461:CDS |
| TACATCAATTGATCTCTGCC+AGG | 0.581512 | 3.1:-66542545 | None:intergenic |
| AGGTATTAAAATAAATCAAG+TGG | 0.581716 | 3.1:+66544478 | MS.gene70461:intron |
| TGGCTTCACAGAAGAAAAGC+AGG | 0.586577 | 3.1:+66542633 | MS.gene70461:CDS |
| ATAAGGCAACGACAGCCCAC+AGG | 0.588619 | 3.1:+66546530 | MS.gene70461:CDS |
| ACAGTTCGAGCAATCTCTCA+CGG | 0.590615 | 3.1:-66544794 | None:intergenic |
| CCCACAGGGCCACAACTCGT+CGG | 0.591725 | 3.1:+66546545 | MS.gene70461:CDS |
| GATTGCTGCACCCTATGCAC+AGG | 0.591848 | 3.1:+66546412 | MS.gene70461:CDS |
| TCTAGTCTGAAAGAGCTGCT+CGG | 0.594593 | 3.1:+66547021 | MS.gene70461:intron |
| GTGGATACATTGACTTCTCG+TGG | 0.595263 | 3.1:+66544497 | MS.gene70461:CDS |
| ACTATGTACACGGTATTAGG+AGG | 0.601581 | 3.1:+66547068 | MS.gene70461:CDS |
| CCCGACGAGTTGTGGCCCTG+TGG | 0.603360 | 3.1:-66546546 | None:intergenic |
| TGTTTAAAGAGTTTGAAGAT+CGG | 0.606621 | 3.1:+66543156 | MS.gene70461:CDS |
| AAGTAGTTATCAAAGTTCAA+AGG | 0.613460 | 3.1:+66543237 | MS.gene70461:CDS |
| AGGGAATCTGTATTACAGCT+CGG | 0.617183 | 3.1:+66542852 | MS.gene70461:CDS |
| AGAAAATGCTCTAATAACAA+AGG | 0.622886 | 3.1:-66545635 | None:intergenic |
| CCTTACAGCTGACAGATCCC+CGG | 0.625234 | 3.1:-66545289 | None:intergenic |
| TACAGCTGACAGATCCCCGG+TGG | 0.626173 | 3.1:-66545286 | None:intergenic |
| AAATTGATTATATAAATGAA+GGG | 0.628702 | 3.1:+66544006 | MS.gene70461:CDS |
| CTACCTCTAGTACTCGAACT+CGG | 0.632492 | 3.1:-66546825 | None:intergenic |
| GAAAGAAACATACAGGTACT+CGG | 0.633321 | 3.1:-66544076 | None:intergenic |
| ACATCTGATAAGTTAAAGAG+TGG | 0.637198 | 3.1:+66542208 | MS.gene70461:CDS |
| TTACGACTTTGGCATGATGG+GGG | 0.641403 | 3.1:+66544755 | MS.gene70461:CDS |
| ATAACCTGGTACATACTCCA+AGG | 0.642881 | 3.1:-66544316 | None:intergenic |
| ACTCCGAGTTCGAGTACTAG+AGG | 0.643048 | 3.1:+66546822 | MS.gene70461:CDS |
| GACATTGTCTGCAATTGGGG+AGG | 0.644164 | 3.1:+66545471 | MS.gene70461:CDS |
| TTGCATTGTCGAAAAGAACA+CGG | 0.647652 | 3.1:-66542594 | None:intergenic |
| ACAAATGGCTACTATGTACA+CGG | 0.650955 | 3.1:+66547058 | MS.gene70461:CDS |
| GAAAACGGCTTCATGGCTAA+GGG | 0.653245 | 3.1:+66542833 | MS.gene70461:CDS |
| GGAGTTTGTGAAGCAAGTTG+AGG | 0.666870 | 3.1:+66546786 | MS.gene70461:CDS |
| GCAGTAATAATGGCTTTGCA+TGG | 0.669620 | 3.1:+66542079 | None:intergenic |
| AAGGTTGATGGAAACCGGAA+TGG | 0.675520 | 3.1:-66545610 | None:intergenic |
| AGAAAACTTAAAGCTGATCG+CGG | 0.679693 | 3.1:+66543717 | MS.gene70461:intron |
| GACACGTAAAGAAAGAACAA+AGG | 0.679744 | 3.1:-66542572 | None:intergenic |
| TAAGGCAACGACAGCCCACA+GGG | 0.682134 | 3.1:+66546531 | MS.gene70461:CDS |
| GGTCCAACTAGAGATTGGAT+CGG | 0.683709 | 3.1:+66543769 | MS.gene70461:CDS |
| ACAGCTGACAGATCCCCGGT+GGG | 0.686035 | 3.1:-66545285 | None:intergenic |
| CATCGTGCAATTCTGCACAA+TGG | 0.686650 | 3.1:+66543209 | MS.gene70461:CDS |
| AAAGCCTCTTGCTTTCTGTG+GGG | 0.714944 | 3.1:-66543099 | None:intergenic |
| TGGAGCCCTCCAACCCACCG+GGG | 0.715980 | 3.1:+66545272 | MS.gene70461:CDS |
| GCAAAATGGGCATATCCGGG+TGG | 0.723451 | 3.1:+66542613 | MS.gene70461:CDS |
| TTGGACAGTTATCATCAACA+AGG | 0.723832 | 3.1:+66542892 | MS.gene70461:CDS |
| TTATGTTTCGAAAATCACGA+CGG | 0.732189 | 3.1:-66544046 | None:intergenic |
| AGTTCATCCACAAATTCACG+GGG | 0.744511 | 3.1:-66542927 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAATACAAATATTTAAA+AGG | - | chr3.1:66544115-66544134 | None:intergenic | 10.0% |
| !! | AAATTGATTATATAAATGAA+GGG | + | chr3.1:66544006-66544025 | MS.gene70461:CDS | 10.0% |
| !!! | TTTCTTTTAATAAATCAATT+AGG | + | chr3.1:66542741-66542760 | MS.gene70461:intron | 10.0% |
| !! | AAAGAAACAAATAAGAAAAT+AGG | - | chr3.1:66545884-66545903 | None:intergenic | 15.0% |
| !! | AAATTTATAAGATAGAGATA+TGG | - | chr3.1:66545372-66545391 | None:intergenic | 15.0% |
| !! | AAGAAACAAATAAGAAAATA+GGG | - | chr3.1:66545883-66545902 | None:intergenic | 15.0% |
| !! | CATTTATATAATCAATTTCT+TGG | - | chr3.1:66544004-66544023 | None:intergenic | 15.0% |
| !! | CTAATTATCTATTCTAATAA+AGG | + | chr3.1:66545086-66545105 | MS.gene70461:intron | 15.0% |
| !! | CTTTATTAGAATAGATAATT+AGG | - | chr3.1:66545088-66545107 | None:intergenic | 15.0% |
| !! | GAAATTGATTATATAAATGA+AGG | + | chr3.1:66544005-66544024 | MS.gene70461:CDS | 15.0% |
| !! | TCTTTAAACAATTCATTAAT+GGG | - | chr3.1:66543146-66543165 | None:intergenic | 15.0% |
| !! | TGAACATGATAAAAAATATT+TGG | - | chr3.1:66547199-66547218 | None:intergenic | 15.0% |
| !! | TTATTGTAACAATATAGAAT+CGG | + | chr3.1:66542105-66542124 | MS.gene70461:CDS | 15.0% |
| !! | TTTATTTAGTGTATTAAACT+TGG | + | chr3.1:66543012-66543031 | MS.gene70461:intron | 15.0% |
| !!! | AATTTCATAATTTGATTTTC+AGG | + | chr3.1:66545387-66545406 | MS.gene70461:intron | 15.0% |
| !!! | ACTTGAATATTTAATTCTTT+TGG | + | chr3.1:66545495-66545514 | MS.gene70461:intron | 15.0% |
| !!! | CTTTAATTTTAAAGAAAACA+AGG | - | chr3.1:66544362-66544381 | None:intergenic | 15.0% |
| !!! | TTATTATTGATGGAATTTTT+TGG | + | chr3.1:66545557-66545576 | MS.gene70461:intron | 15.0% |
| !!! | TTATTTGATTTTTTTTTTCC+CGG | + | chr3.1:66544451-66544470 | MS.gene70461:intron | 15.0% |
| !!! | TTCAACTTATTTTTTCTTAT+TGG | + | chr3.1:66546979-66546998 | MS.gene70461:intron | 15.0% |
| !! | AAAGTTTAAGTAAATGTGAA+AGG | - | chr3.1:66545211-66545230 | None:intergenic | 20.0% |
| !! | AGAAACAAATAAGAAAATAG+GGG | - | chr3.1:66545882-66545901 | None:intergenic | 20.0% |
| !! | AGGTATTAAAATAAATCAAG+TGG | + | chr3.1:66544478-66544497 | MS.gene70461:intron | 20.0% |
| !! | ATAAATTGTCAAAGAATGAA+AGG | + | chr3.1:66542182-66542201 | MS.gene70461:CDS | 20.0% |
| !! | CTCTTTAAACAATTCATTAA+TGG | - | chr3.1:66543147-66543166 | None:intergenic | 20.0% |
| !! | TAGAGATTGGAAATTTATAA+AGG | - | chr3.1:66544211-66544230 | None:intergenic | 20.0% |
| !! | TATGCGGTTAATATTAAAAT+TGG | - | chr3.1:66544237-66544256 | None:intergenic | 20.0% |
| !! | TCAATTATTTATTACGACTT+TGG | + | chr3.1:66544744-66544763 | MS.gene70461:CDS | 20.0% |
| !! | TGAGAAAAAACTATTAAAGT+AGG | + | chr3.1:66546110-66546129 | MS.gene70461:intron | 20.0% |
| !!! | ACAACTAAGTTTTATATACA+TGG | + | chr3.1:66543545-66543564 | MS.gene70461:intron | 20.0% |
| !!! | AGAAAAAATAAGTTGAAGAA+TGG | - | chr3.1:66546976-66546995 | None:intergenic | 20.0% |
| !!! | AGTTTTAATCTTTTACAAGA+TGG | + | chr3.1:66545321-66545340 | MS.gene70461:intron | 20.0% |
| !!! | ATATATGATTAATTTTGCTG+AGG | - | chr3.1:66543412-66543431 | None:intergenic | 20.0% |
| !!! | GTGAAGCATTATTTTAATTA+TGG | + | chr3.1:66546670-66546689 | MS.gene70461:intron | 20.0% |
| !!! | TATGGCAATTTTATTATTGA+TGG | + | chr3.1:66545547-66545566 | MS.gene70461:intron | 20.0% |
| !!! | TATTTGATTTTTTTTTTCCC+GGG | + | chr3.1:66544452-66544471 | MS.gene70461:intron | 20.0% |
| !!! | TCATGATATCTTCATATTTT+AGG | + | chr3.1:66546077-66546096 | MS.gene70461:intron | 20.0% |
| !!! | TTTTGTTCATACTATTCTTA+CGG | + | chr3.1:66547277-66547296 | MS.gene70461:CDS | 20.0% |
| ! | AACTCATTTACACAATAACA+CGG | + | chr3.1:66546281-66546300 | MS.gene70461:intron | 25.0% |
| ! | AAGTAGTTATCAAAGTTCAA+AGG | + | chr3.1:66543237-66543256 | MS.gene70461:CDS | 25.0% |
| ! | ACTATGATATCATCCAAAAA+GGG | + | chr3.1:66543631-66543650 | MS.gene70461:intron | 25.0% |
| ! | AGAAAATGCTCTAATAACAA+AGG | - | chr3.1:66545638-66545657 | None:intergenic | 25.0% |
| ! | ATATCCCAAATTATTTACCT+TGG | + | chr3.1:66546146-66546165 | MS.gene70461:intron | 25.0% |
| ! | ATTACAAAACAAACATCATC+TGG | - | chr3.1:66546637-66546656 | None:intergenic | 25.0% |
| ! | ATTGACACCAATATTTAGAA+AGG | - | chr3.1:66547096-66547115 | None:intergenic | 25.0% |
| ! | CATAATCATGTCTCATATAT+TGG | + | chr3.1:66544168-66544187 | MS.gene70461:intron | 25.0% |
| ! | CCATCAAAATTAGGTAATAA+TGG | + | chr3.1:66542277-66542296 | MS.gene70461:CDS | 25.0% |
| ! | CCATTAAACCTATATTTCAT+GGG | - | chr3.1:66546017-66546036 | None:intergenic | 25.0% |
| ! | CTTCAAGGAAATAAAGTTAT+TGG | - | chr3.1:66544385-66544404 | None:intergenic | 25.0% |
| ! | GTTGAATATATTCATCTGAT+CGG | + | chr3.1:66544615-66544634 | MS.gene70461:intron | 25.0% |
| ! | TAAATCAATTAGGTTTCTGT+TGG | + | chr3.1:66542751-66542770 | MS.gene70461:intron | 25.0% |
| ! | TACTATGATATCATCCAAAA+AGG | + | chr3.1:66543630-66543649 | MS.gene70461:intron | 25.0% |
| ! | TATATGAGACATGATTATGA+AGG | - | chr3.1:66544167-66544186 | None:intergenic | 25.0% |
| ! | TATTAGATACACTTTCAGAT+AGG | - | chr3.1:66544589-66544608 | None:intergenic | 25.0% |
| ! | TCAAACTTTAACATGTAATG+AGG | - | chr3.1:66543858-66543877 | None:intergenic | 25.0% |
| ! | TCCATTAAACCTATATTTCA+TGG | - | chr3.1:66546018-66546037 | None:intergenic | 25.0% |
| ! | TGAGTTAAAGTGTATCTAAA+TGG | - | chr3.1:66546267-66546286 | None:intergenic | 25.0% |
| ! | TGCCATAAATTCAGATAATT+CGG | - | chr3.1:66545534-66545553 | None:intergenic | 25.0% |
| ! | TGTCCAAGTTTAATAAAAGT+TGG | - | chr3.1:66542879-66542898 | None:intergenic | 25.0% |
| ! | TGTTTAAAGAGTTTGAAGAT+CGG | + | chr3.1:66543156-66543175 | MS.gene70461:CDS | 25.0% |
| ! | TTAAAATTGGAGTTAGAGAT+TGG | - | chr3.1:66544224-66544243 | None:intergenic | 25.0% |
| ! | TTACTTTAAATGAGGTACAA+AGG | - | chr3.1:66545712-66545731 | None:intergenic | 25.0% |
| ! | TTCCGAATTATCTGAATTTA+TGG | + | chr3.1:66545529-66545548 | MS.gene70461:intron | 25.0% |
| ! | TTGTCTAATATTACGAAACT+TGG | + | chr3.1:66543444-66543463 | MS.gene70461:intron | 25.0% |
| ! | TTTAGTGTATTAAACTTGGT+TGG | + | chr3.1:66543016-66543035 | MS.gene70461:intron | 25.0% |
| !! | AAATAAGAAAATAGGGGTAT+TGG | - | chr3.1:66545876-66545895 | None:intergenic | 25.0% |
| !! | ACATTAAATTACGTCTTGTT+TGG | + | chr3.1:66546909-66546928 | MS.gene70461:intron | 25.0% |
| !! | AGAACTTTTCAATTTCCTTT+TGG | - | chr3.1:66545848-66545867 | None:intergenic | 25.0% |
| !! | CATATACGATATACCAATTT+TGG | - | chr3.1:66545765-66545784 | None:intergenic | 25.0% |
| !! | CCATTATTACCTAATTTTGA+TGG | - | chr3.1:66542280-66542299 | None:intergenic | 25.0% |
| !! | GTGCAAAGTATTAAAAATGA+TGG | - | chr3.1:66543927-66543946 | None:intergenic | 25.0% |
| !! | TGATTTTCGAAACATAAAGT+GGG | + | chr3.1:66544052-66544071 | MS.gene70461:CDS | 25.0% |
| !! | TTGATTGTTGATAAGCTATT+AGG | + | chr3.1:66544933-66544952 | MS.gene70461:intron | 25.0% |
| !!! | AATAAGAAAATAGGGGTATT+GGG | - | chr3.1:66545875-66545894 | None:intergenic | 25.0% |
| !!! | GACAGATTTTTGCTATAATT+CGG | - | chr3.1:66545066-66545085 | None:intergenic | 25.0% |
| !!! | TTATTACCTAATTTTGATGG+CGG | - | chr3.1:66542277-66542296 | None:intergenic | 25.0% |
| !!! | TTTATTTTAATACCTGTTCC+CGG | - | chr3.1:66544473-66544492 | None:intergenic | 25.0% |
| AAAGCTTAAATGAAAGTTCC+AGG | - | chr3.1:66546609-66546628 | None:intergenic | 30.0% | |
| AAATCAGTATAAGGCATGAT+TGG | + | chr3.1:66546043-66546062 | MS.gene70461:intron | 30.0% | |
| ACATCTGATAAGTTAAAGAG+TGG | + | chr3.1:66542208-66542227 | MS.gene70461:CDS | 30.0% | |
| ACCTTAGCTTACTTTAAATG+AGG | - | chr3.1:66545720-66545739 | None:intergenic | 30.0% | |
| ACTAGAATTAACAAGTCTCA+CGG | + | chr3.1:66546705-66546724 | MS.gene70461:intron | 30.0% | |
| ACTCATTTACACAATAACAC+GGG | + | chr3.1:66546282-66546301 | MS.gene70461:intron | 30.0% | |
| AGAAAAGAACAATAGGATGT+AGG | + | chr3.1:66545982-66546001 | MS.gene70461:intron | 30.0% | |
| ATAAGAGCAATTATGAATCC+AGG | - | chr3.1:66544435-66544454 | None:intergenic | 30.0% | |
| ATATAACATTCTTCAGGACA+AGG | + | chr3.1:66543064-66543083 | MS.gene70461:intron | 30.0% | |
| ATCTTCACAAATGAGAAATC+TGG | - | chr3.1:66546395-66546414 | None:intergenic | 30.0% | |
| ATTGAGAGTTCAAAGAATAG+AGG | + | chr3.1:66546765-66546784 | MS.gene70461:CDS | 30.0% | |
| CCCATGAAATATAGGTTTAA+TGG | + | chr3.1:66546014-66546033 | MS.gene70461:intron | 30.0% | |
| CGTTAGTATCATGTTTAAGA+TGG | + | chr3.1:66543355-66543374 | MS.gene70461:intron | 30.0% | |
| CTTTAACATGTAATGAGGTA+AGG | - | chr3.1:66543853-66543872 | None:intergenic | 30.0% | |
| GACACCAAGGTAAATAATTT+GGG | - | chr3.1:66546153-66546172 | None:intergenic | 30.0% | |
| GTGTTACAGATATTGAAAAC+AGG | + | chr3.1:66544669-66544688 | MS.gene70461:intron | 30.0% | |
| TAAACCTATATTTCATGGGA+TGG | - | chr3.1:66546013-66546032 | None:intergenic | 30.0% | |
| TAAATTTCGTAGATTTGTGG+TGG | + | chr3.1:66542231-66542250 | MS.gene70461:CDS | 30.0% | |
| TAATGGTAGAGCTGTTAAAA+TGG | + | chr3.1:66542294-66542313 | MS.gene70461:CDS | 30.0% | |
| TACAGGAACTTCTAGATATA+AGG | + | chr3.1:66546513-66546532 | MS.gene70461:intron | 30.0% | |
| TATCTGGTCTAGTTATTGTA+AGG | + | chr3.1:66543607-66543626 | MS.gene70461:intron | 30.0% | |
| TATTGCAGAAAGAAACATAC+AGG | - | chr3.1:66544086-66544105 | None:intergenic | 30.0% | |
| TATTGGCAATGAAACATGAT+TGG | + | chr3.1:66545941-66545960 | MS.gene70461:intron | 30.0% | |
| TCAGAGTAAATCAAGTTTCA+AGG | - | chr3.1:66544144-66544163 | None:intergenic | 30.0% | |
| TCTATTCTTTGAACTCTCAA+TGG | - | chr3.1:66546766-66546785 | None:intergenic | 30.0% | |
| TGACACCAAGGTAAATAATT+TGG | - | chr3.1:66546154-66546173 | None:intergenic | 30.0% | |
| TGGTAAATTTCGTAGATTTG+TGG | + | chr3.1:66542228-66542247 | MS.gene70461:CDS | 30.0% | |
| TTATGTTTCGAAAATCACGA+CGG | - | chr3.1:66544049-66544068 | None:intergenic | 30.0% | |
| TTCTCGATATAACATTCTTC+AGG | + | chr3.1:66543058-66543077 | MS.gene70461:intron | 30.0% | |
| TTGATAGAAACAACACTTCA+AGG | - | chr3.1:66544400-66544419 | None:intergenic | 30.0% | |
| ! | AAAGTTTGAGCAACTCTTTT+TGG | + | chr3.1:66543869-66543888 | MS.gene70461:intron | 30.0% |
| ! | AAGTTTGAGCAACTCTTTTT+GGG | + | chr3.1:66543870-66543889 | MS.gene70461:intron | 30.0% |
| ! | AATCATGCCTTATACTGATT+TGG | - | chr3.1:66546044-66546063 | None:intergenic | 30.0% |
| ! | ACCTCATTTAAAGTAAGCTA+AGG | + | chr3.1:66545716-66545735 | MS.gene70461:intron | 30.0% |
| ! | ATTCAATGCCTTATTGATCT+TGG | + | chr3.1:66545252-66545271 | MS.gene70461:CDS | 30.0% |
| ! | CCTATTGTTCTTTTCTTTCT+CGG | - | chr3.1:66545978-66545997 | None:intergenic | 30.0% |
| ! | GAGATCTGTACAATTTTTCT+TGG | + | chr3.1:66545414-66545433 | MS.gene70461:CDS | 30.0% |
| ! | GGTCCAACTTTTATTAAACT+TGG | + | chr3.1:66542873-66542892 | MS.gene70461:CDS | 30.0% |
| ! | GTGATTTTCGAAACATAAAG+TGG | + | chr3.1:66544051-66544070 | MS.gene70461:CDS | 30.0% |
| ! | TATATCATGCATGCTTTTAC+AGG | + | chr3.1:66546496-66546515 | MS.gene70461:intron | 30.0% |
| ! | TCATGTTTAAGATGGATCTA+AGG | + | chr3.1:66543363-66543382 | MS.gene70461:intron | 30.0% |
| ! | TCTTTTCGACAATGCAAAAT+GGG | + | chr3.1:66542600-66542619 | MS.gene70461:CDS | 30.0% |
| ! | TGAAAGAAACTAGACCTTTT+TGG | - | chr3.1:66544844-66544863 | None:intergenic | 30.0% |
| ! | TGACTTTTTATTCTTCTGAC+AGG | + | chr3.1:66546350-66546369 | MS.gene70461:intron | 30.0% |
| ! | TTCTTTTCGACAATGCAAAA+TGG | + | chr3.1:66542599-66542618 | MS.gene70461:CDS | 30.0% |
| ! | TTGCATTTTAGATAAGCAGA+AGG | + | chr3.1:66542808-66542827 | MS.gene70461:intron | 30.0% |
| ! | TTTCAGAGAAGTGAAACTTT+TGG | + | chr3.1:66543745-66543764 | MS.gene70461:CDS | 30.0% |
| !! | ATAGCATTTTAACCGAGAAT+GGG | - | chr3.1:66546466-66546485 | None:intergenic | 30.0% |
| !! | ATATACCAATTTTGGTATGC+CGG | - | chr3.1:66545757-66545776 | None:intergenic | 30.0% |
| !! | GTCAATATTTTCAAGCTCAT+TGG | + | chr3.1:66542982-66543001 | MS.gene70461:intron | 30.0% |
| !! | GTTTTATTCCGTTTATGAGA+AGG | + | chr3.1:66544815-66544834 | MS.gene70461:CDS | 30.0% |
| !!! | AAAACTTTTAGCTCTTCAAG+TGG | - | chr3.1:66542481-66542500 | None:intergenic | 30.0% |
| !!! | CATAATTTGATTTTCAGGTG+AGG | + | chr3.1:66545392-66545411 | MS.gene70461:intron | 30.0% |
| !!! | TATTGATGGAATTTTTTGGC+AGG | + | chr3.1:66545561-66545580 | MS.gene70461:intron | 30.0% |
| !!! | TTATTTTAATACCTGTTCCC+GGG | - | chr3.1:66544472-66544491 | None:intergenic | 30.0% |
| AAAGAACAATAGGATGTAGG+TGG | + | chr3.1:66545985-66546004 | MS.gene70461:intron | 35.0% | |
| AACATCACAAGATGTGCAAA+TGG | - | chr3.1:66543322-66543341 | None:intergenic | 35.0% | |
| AAGGATTTCTGAATTGCTAG+AGG | + | chr3.1:66543382-66543401 | MS.gene70461:intron | 35.0% | |
| AATAAAGTGGAGACAGTCAA+TGG | + | chr3.1:66542358-66542377 | MS.gene70461:CDS | 35.0% | |
| AATAACTACATGTCTAGCGT+AGG | - | chr3.1:66546178-66546197 | None:intergenic | 35.0% | |
| AATTATGAATCCAGGTTCAG+TGG | - | chr3.1:66544427-66544446 | None:intergenic | 35.0% | |
| ACAAATGGCTACTATGTACA+CGG | + | chr3.1:66547058-66547077 | MS.gene70461:CDS | 35.0% | |
| ACATCAATAGCAAGATTTCC+AGG | - | chr3.1:66544717-66544736 | None:intergenic | 35.0% | |
| AGAAAACTTAAAGCTGATCG+CGG | + | chr3.1:66543717-66543736 | MS.gene70461:intron | 35.0% | |
| ATAACAAAGGTGAAGGTTGA+TGG | - | chr3.1:66545625-66545644 | None:intergenic | 35.0% | |
| ATAACTACATGTCTAGCGTA+GGG | - | chr3.1:66546177-66546196 | None:intergenic | 35.0% | |
| ATTCTTACGGTCTATGCAAA+GGG | + | chr3.1:66547290-66547309 | MS.gene70461:CDS | 35.0% | |
| CACTATTCAAGATGATAACC+TGG | - | chr3.1:66544333-66544352 | None:intergenic | 35.0% | |
| CATTACAAGAAGACACAAAC+AGG | - | chr3.1:66544978-66544997 | None:intergenic | 35.0% | |
| CCAATGAAAATTACAGTTCC+TGG | + | chr3.1:66542527-66542546 | MS.gene70461:CDS | 35.0% | |
| CCGAGAAAGAAAAGAACAAT+AGG | + | chr3.1:66545975-66545994 | MS.gene70461:intron | 35.0% | |
| CTGATTGTGAAAGACATATC+TGG | + | chr3.1:66543591-66543610 | MS.gene70461:intron | 35.0% | |
| GAAAGAAACATACAGGTACT+CGG | - | chr3.1:66544079-66544098 | None:intergenic | 35.0% | |
| GACACGTAAAGAAAGAACAA+AGG | - | chr3.1:66542575-66542594 | None:intergenic | 35.0% | |
| GCATGTGAAGATGAAAGAAT+TGG | - | chr3.1:66546852-66546871 | None:intergenic | 35.0% | |
| GGAGGAACCTTTCTAAATAT+TGG | + | chr3.1:66547086-66547105 | MS.gene70461:CDS | 35.0% | |
| GGTATATCGTATATGTGAAG+AGG | + | chr3.1:66545770-66545789 | MS.gene70461:intron | 35.0% | |
| GTATCAGCTTATTCATATGC+AGG | + | chr3.1:66547252-66547271 | MS.gene70461:intron | 35.0% | |
| TACACTTTCAGATAGGAACA+AGG | - | chr3.1:66544582-66544601 | None:intergenic | 35.0% | |
| TAGAGCTGTTAAAATGGTAC+CGG | + | chr3.1:66542300-66542319 | MS.gene70461:CDS | 35.0% | |
| TATGTCTTTCACAATCAGTG+TGG | - | chr3.1:66543589-66543608 | None:intergenic | 35.0% | |
| TATTACGACTTTGGCATGAT+GGG | + | chr3.1:66544753-66544772 | MS.gene70461:CDS | 35.0% | |
| TATTCTTACGGTCTATGCAA+AGG | + | chr3.1:66547289-66547308 | MS.gene70461:CDS | 35.0% | |
| TCAAAAAGCTTCTTCAAACC+AGG | - | chr3.1:66543263-66543282 | None:intergenic | 35.0% | |
| TCAGTTATTGTTCCCATTCT+CGG | + | chr3.1:66546451-66546470 | MS.gene70461:intron | 35.0% | |
| TCATGAGGAAAGTAGTGTAT+TGG | + | chr3.1:66545924-66545943 | MS.gene70461:intron | 35.0% | |
| TCTTTCATCTTCACATGCTA+TGG | + | chr3.1:66546854-66546873 | MS.gene70461:intron | 35.0% | |
| TCTTTGTAAACCTTTCTGCA+CGG | + | chr3.1:66545899-66545918 | MS.gene70461:intron | 35.0% | |
| TGCTCTAATAACAAAGGTGA+AGG | - | chr3.1:66545632-66545651 | None:intergenic | 35.0% | |
| TGGAACACCAAATCAGTATA+AGG | + | chr3.1:66546034-66546053 | MS.gene70461:intron | 35.0% | |
| TTATGAGAAGGATGCCAAAA+AGG | + | chr3.1:66544827-66544846 | MS.gene70461:CDS | 35.0% | |
| TTATTACGACTTTGGCATGA+TGG | + | chr3.1:66544752-66544771 | MS.gene70461:CDS | 35.0% | |
| TTCACATTCACACACACATT+AGG | + | chr3.1:66545015-66545034 | MS.gene70461:intron | 35.0% | |
| TTCATGCACATTAGAAGAGA+AGG | - | chr3.1:66545678-66545697 | None:intergenic | 35.0% | |
| TTGCAAAAGTTTGATTGCCT+TGG | - | chr3.1:66547127-66547146 | None:intergenic | 35.0% | |
| TTGCATTGTCGAAAAGAACA+CGG | - | chr3.1:66542597-66542616 | None:intergenic | 35.0% | |
| TTGGACAGTTATCATCAACA+AGG | + | chr3.1:66542892-66542911 | MS.gene70461:CDS | 35.0% | |
| TTGGGATTATACAGCAATGA+AGG | + | chr3.1:66544287-66544306 | MS.gene70461:CDS | 35.0% | |
| TTTATTCTTCTGACAGGCAT+AGG | + | chr3.1:66546356-66546375 | MS.gene70461:intron | 35.0% | |
| TTTGCAAATGGATCGTTTGT+TGG | + | chr3.1:66547140-66547159 | MS.gene70461:CDS | 35.0% | |
| TTTGGCATCCTTCTCATAAA+CGG | - | chr3.1:66544826-66544845 | None:intergenic | 35.0% | |
| ! | CATTTTAGATAAGCAGAAGG+AGG | + | chr3.1:66542811-66542830 | MS.gene70461:intron | 35.0% |
| ! | CCAGGAACTGTAATTTTCAT+TGG | - | chr3.1:66542530-66542549 | None:intergenic | 35.0% |
| ! | GGCAATCAAACTTTTGCAAA+TGG | + | chr3.1:66547128-66547147 | MS.gene70461:CDS | 35.0% |
| ! | TTTTCTGAACTCTAACTAGC+TGG | + | chr3.1:66542672-66542691 | MS.gene70461:intron | 35.0% |
| !! | AGAGCATTTTCTACACTTGA+AGG | + | chr3.1:66545646-66545665 | MS.gene70461:CDS | 35.0% |
| !! | CATAGCATTTTAACCGAGAA+TGG | - | chr3.1:66546467-66546486 | None:intergenic | 35.0% |
| !! | GGCTTTATTGAGAGTGAATT+AGG | + | chr3.1:66543116-66543135 | MS.gene70461:CDS | 35.0% |
| !!! | ATTTTTTTTTTCCCGGGAAC+AGG | + | chr3.1:66544458-66544477 | MS.gene70461:intron | 35.0% |
| AAGTCTCACGGAACATTTGT+AGG | + | chr3.1:66546717-66546736 | MS.gene70461:intron | 40.0% | |
| AATGCAAAATGGGCATATCC+GGG | + | chr3.1:66542610-66542629 | MS.gene70461:CDS | 40.0% | |
| ACTATGTACACGGTATTAGG+AGG | + | chr3.1:66547068-66547087 | MS.gene70461:CDS | 40.0% | |
| AGCAGACATTGTCTGCAATT+GGG | + | chr3.1:66545467-66545486 | MS.gene70461:CDS | 40.0% | |
| AGCTGTTAATGGAGCAAGTT+TGG | + | chr3.1:66542390-66542409 | MS.gene70461:CDS | 40.0% | |
| AGGGAATCTGTATTACAGCT+CGG | + | chr3.1:66542852-66542871 | MS.gene70461:CDS | 40.0% | |
| AGTAAATGTGAAAGGACCCT+TGG | - | chr3.1:66545203-66545222 | None:intergenic | 40.0% | |
| AGTTCATCCACAAATTCACG+GGG | - | chr3.1:66542930-66542949 | None:intergenic | 40.0% | |
| ATAAAGCCTCTTGCTTTCTG+TGG | - | chr3.1:66543104-66543123 | None:intergenic | 40.0% | |
| ATAACCTGGTACATACTCCA+AGG | - | chr3.1:66544319-66544338 | None:intergenic | 40.0% | |
| ATACCGATCCAATCTCTAGT+TGG | - | chr3.1:66543775-66543794 | None:intergenic | 40.0% | |
| ATAGCAAGATTTCCAGGATG+TGG | - | chr3.1:66544711-66544730 | None:intergenic | 40.0% | |
| ATCCCAATAAACCAGCTACA+AGG | - | chr3.1:66544274-66544293 | None:intergenic | 40.0% | |
| ATGAAGGGAAGAATGCTGAT+AGG | + | chr3.1:66544021-66544040 | MS.gene70461:CDS | 40.0% | |
| ATGATGTACCACACTTTACC+TGG | + | chr3.1:66546588-66546607 | MS.gene70461:intron | 40.0% | |
| ATTACGACTTTGGCATGATG+GGG | + | chr3.1:66544754-66544773 | MS.gene70461:CDS | 40.0% | |
| CAAAAAGGGACGTTAAAGCT+TGG | + | chr3.1:66543645-66543664 | MS.gene70461:intron | 40.0% | |
| CAATGCAAAATGGGCATATC+CGG | + | chr3.1:66542609-66542628 | MS.gene70461:CDS | 40.0% | |
| CGAAGATCACTAGACAATCT+TGG | + | chr3.1:66542136-66542155 | MS.gene70461:CDS | 40.0% | |
| CGAGTTCATCCACAAATTCA+CGG | - | chr3.1:66542932-66542951 | None:intergenic | 40.0% | |
| CTAGCTGGTAGAAAGTTTCT+CGG | + | chr3.1:66542687-66542706 | MS.gene70461:intron | 40.0% | |
| CTCTTAGCTACCAATTCCAA+GGG | + | chr3.1:66545184-66545203 | MS.gene70461:intron | 40.0% | |
| CTTTCAATTGACAACGATGC+AGG | + | chr3.1:66545227-66545246 | MS.gene70461:intron | 40.0% | |
| GAAAGCGACAGTGTTACAAA+TGG | + | chr3.1:66547043-66547062 | MS.gene70461:CDS | 40.0% | |
| GAAATGCCGCCATCAAAATT+AGG | + | chr3.1:66542268-66542287 | MS.gene70461:CDS | 40.0% | |
| GAATATGAACCTAAGCTCGA+AGG | + | chr3.1:66545809-66545828 | MS.gene70461:intron | 40.0% | |
| GAGTTCATCCACAAATTCAC+GGG | - | chr3.1:66542931-66542950 | None:intergenic | 40.0% | |
| GATAAGCAGAAGGAGGAAAA+CGG | + | chr3.1:66542818-66542837 | MS.gene70461:intron | 40.0% | |
| GCTACTATGTACACGGTATT+AGG | + | chr3.1:66547065-66547084 | MS.gene70461:CDS | 40.0% | |
| GGAAGTTCATTGGAGATTGT+AGG | - | chr3.1:66542457-66542476 | None:intergenic | 40.0% | |
| GGATCCATCCCATGAAATAT+AGG | + | chr3.1:66546006-66546025 | MS.gene70461:intron | 40.0% | |
| GGCAGAGATCAATTGATGTA+TGG | + | chr3.1:66542548-66542567 | MS.gene70461:CDS | 40.0% | |
| GTCTCCACTTTATTCTCTGA+CGG | - | chr3.1:66542352-66542371 | None:intergenic | 40.0% | |
| GTTATCAAAGTTCAAAGGCC+TGG | + | chr3.1:66543242-66543261 | MS.gene70461:CDS | 40.0% | |
| TAAAGCCTCTTGCTTTCTGT+GGG | - | chr3.1:66543103-66543122 | None:intergenic | 40.0% | |
| TACATCAATTGATCTCTGCC+AGG | - | chr3.1:66542548-66542567 | None:intergenic | 40.0% | |
| TATCAATATGCCACTGAACC+TGG | + | chr3.1:66544414-66544433 | MS.gene70461:intron | 40.0% | |
| TATTGAGGCGTACTTGATTC+AGG | + | chr3.1:66544550-66544569 | MS.gene70461:CDS | 40.0% | |
| TCCCAATAAACCAGCTACAA+GGG | - | chr3.1:66544273-66544292 | None:intergenic | 40.0% | |
| TCTATTTCCCCGTGAATTTG+TGG | + | chr3.1:66542920-66542939 | MS.gene70461:CDS | 40.0% | |
| TGAAAGTTCCAGGTAAAGTG+TGG | - | chr3.1:66546599-66546618 | None:intergenic | 40.0% | |
| TTCACAGAAGAAAAGCAGGT+AGG | + | chr3.1:66542637-66542656 | MS.gene70461:intron | 40.0% | |
| TTCGTTGTCTTTGTCAATGC+TGG | - | chr3.1:66542433-66542452 | None:intergenic | 40.0% | |
| ! | AAAGTTTTGCCCTCAGATGA+AGG | + | chr3.1:66542493-66542512 | MS.gene70461:CDS | 40.0% |
| ! | AATCTCATCACGTGCTATTG+AGG | + | chr3.1:66544535-66544554 | MS.gene70461:CDS | 40.0% |
| ! | ACCCTTGTAGCTGGTTTATT+GGG | + | chr3.1:66544269-66544288 | MS.gene70461:intron | 40.0% |
| ! | CAGAGAAGTGAAACTTTTGG+TGG | + | chr3.1:66543748-66543767 | MS.gene70461:CDS | 40.0% |
| ! | GAAGAAAAGCAGGTAGGTTT+TGG | + | chr3.1:66542643-66542662 | MS.gene70461:intron | 40.0% |
| ! | GCTTTATTCTTGCGACTGAT+TGG | + | chr3.1:66547230-66547249 | MS.gene70461:intron | 40.0% |
| ! | TTCAAGTGGTGGAAGTTCAT+TGG | - | chr3.1:66542467-66542486 | None:intergenic | 40.0% |
| ! | TTTGGGATATCTCTCACAAC+TGG | - | chr3.1:66546136-66546155 | None:intergenic | 40.0% |
| !! | AACTCTCAATGGCATTGACA+TGG | - | chr3.1:66546755-66546774 | None:intergenic | 40.0% |
| !! | AATTTTGGTATGCCGGACTT+CGG | - | chr3.1:66545750-66545769 | None:intergenic | 40.0% |
| !! | CAAGCTTTAACGTCCCTTTT+TGG | - | chr3.1:66543647-66543666 | None:intergenic | 40.0% |
| !! | CTTTTTGCTATCTCAGTTGC+CGG | - | chr3.1:66542322-66542341 | None:intergenic | 40.0% |
| !! | GGCTTGTTGCTTTAACCAAA+AGG | + | chr3.1:66545830-66545849 | MS.gene70461:intron | 40.0% |
| !!! | ACTTTTAGCTCTTCAAGTGG+TGG | - | chr3.1:66542478-66542497 | None:intergenic | 40.0% |
| !!! | CAGCTTTAAGTTTTCTGGAC+AGG | - | chr3.1:66543713-66543732 | None:intergenic | 40.0% |
| !!! | GCGATCAGCTTTAAGTTTTC+TGG | - | chr3.1:66543718-66543737 | None:intergenic | 40.0% |
| AAAGCCTCTTGCTTTCTGTG+GGG | - | chr3.1:66543102-66543121 | None:intergenic | 45.0% | |
| ACAGTCTGAACCTGTGCATA+GGG | - | chr3.1:66546425-66546444 | None:intergenic | 45.0% | |
| ACAGTTCGAGCAATCTCTCA+CGG | - | chr3.1:66544797-66544816 | None:intergenic | 45.0% | |
| CAACTGAAGCCTTCATCTGA+GGG | - | chr3.1:66542505-66542524 | None:intergenic | 45.0% | |
| CATCGTGCAATTCTGCACAA+TGG | + | chr3.1:66543209-66543228 | MS.gene70461:CDS | 45.0% | |
| CCTCTTAGCTACCAATTCCA+AGG | + | chr3.1:66545183-66545202 | MS.gene70461:intron | 45.0% | |
| CTACCTCTAGTACTCGAACT+CGG | - | chr3.1:66546828-66546847 | None:intergenic | 45.0% | |
| CTCAGATGAAGGCTTCAGTT+GGG | + | chr3.1:66542504-66542523 | MS.gene70461:CDS | 45.0% | |
| GAAAACGGCTTCATGGCTAA+GGG | + | chr3.1:66542833-66542852 | MS.gene70461:CDS | 45.0% | |
| GAAGTCCGGCATACCAAAAT+TGG | + | chr3.1:66545749-66545768 | MS.gene70461:intron | 45.0% | |
| GACAATGTCTGCTCTTGATC+TGG | - | chr3.1:66545460-66545479 | None:intergenic | 45.0% | |
| GACACCGTCAGAGAATAAAG+TGG | + | chr3.1:66542345-66542364 | MS.gene70461:CDS | 45.0% | |
| GACAGGACAAGAAACTCGTT+AGG | - | chr3.1:66543696-66543715 | None:intergenic | 45.0% | |
| GAGCAGACATTGTCTGCAAT+TGG | + | chr3.1:66545466-66545485 | MS.gene70461:CDS | 45.0% | |
| GCAGACATTGTCTGCAATTG+GGG | + | chr3.1:66545468-66545487 | MS.gene70461:CDS | 45.0% | |
| GGAGTTTGTGAAGCAAGTTG+AGG | + | chr3.1:66546786-66546805 | MS.gene70461:CDS | 45.0% | |
| GGATGAACTCGCAAAATTGC+AGG | + | chr3.1:66542941-66542960 | MS.gene70461:CDS | 45.0% | |
| GGCTCAAAGCAAGCTGTTAA+TGG | + | chr3.1:66542379-66542398 | MS.gene70461:CDS | 45.0% | |
| GGGTGCAAATGAAGGATATG+CGG | - | chr3.1:66544253-66544272 | None:intergenic | 45.0% | |
| GGTCCAACTAGAGATTGGAT+CGG | + | chr3.1:66543769-66543788 | MS.gene70461:CDS | 45.0% | |
| GTCTTTGTCAATGCTGGAGT+AGG | - | chr3.1:66542427-66542446 | None:intergenic | 45.0% | |
| TCCTGAAAAGTAGCATGTGC+AGG | - | chr3.1:66543974-66543993 | None:intergenic | 45.0% | |
| TCTAGTCTGAAAGAGCTGCT+CGG | + | chr3.1:66547021-66547040 | MS.gene70461:intron | 45.0% | |
| TGGCTTCACAGAAGAAAAGC+AGG | + | chr3.1:66542633-66542652 | MS.gene70461:CDS | 45.0% | |
| TGTGAAAGGACCCTTGGAAT+TGG | - | chr3.1:66545197-66545216 | None:intergenic | 45.0% | |
| TTACGACTTTGGCATGATGG+GGG | + | chr3.1:66544755-66544774 | MS.gene70461:CDS | 45.0% | |
| TTCATTTGCACCCTTGTAGC+TGG | + | chr3.1:66544260-66544279 | MS.gene70461:intron | 45.0% | |
| TTGACCTTGGAGTATGTACC+AGG | + | chr3.1:66544312-66544331 | MS.gene70461:CDS | 45.0% | |
| ! | AATGGATCGTTTGTTGGTGC+AGG | + | chr3.1:66547146-66547165 | MS.gene70461:CDS | 45.0% |
| ! | AGCTACAAGGGTGCAAATGA+AGG | - | chr3.1:66544261-66544280 | None:intergenic | 45.0% |
| ! | CACCCTTGTAGCTGGTTTAT+TGG | + | chr3.1:66544268-66544287 | MS.gene70461:intron | 45.0% |
| ! | CCTTGGAATTGGTAGCTAAG+AGG | - | chr3.1:66545186-66545205 | None:intergenic | 45.0% |
| ! | GGTGTCAATTTGACTAGCCA+AGG | + | chr3.1:66547107-66547126 | MS.gene70461:CDS | 45.0% |
| ! | TTGGTGGTCCAACTAGAGAT+TGG | + | chr3.1:66543764-66543783 | MS.gene70461:CDS | 45.0% |
| ! | TTTGTGAAGCAAGTTGAGGC+AGG | + | chr3.1:66546790-66546809 | MS.gene70461:CDS | 45.0% |
| ! | TTTTCTTCTGTGAAGCCACC+CGG | - | chr3.1:66542631-66542650 | None:intergenic | 45.0% |
| !! | AAGGTTGATGGAAACCGGAA+TGG | - | chr3.1:66545613-66545632 | None:intergenic | 45.0% |
| !! | AGCAATGAAGGTGTTGACCT+TGG | + | chr3.1:66544299-66544318 | MS.gene70461:CDS | 45.0% |
| !! | AGGTGAAGGTTGATGGAAAC+CGG | - | chr3.1:66545618-66545637 | None:intergenic | 45.0% |
| !! | GTGGATACATTGACTTCTCG+TGG | + | chr3.1:66544497-66544516 | MS.gene70461:CDS | 45.0% |
| !!! | TCCTGCACATGCTACTTTTC+AGG | + | chr3.1:66543970-66543989 | MS.gene70461:intron | 45.0% |
| ACTCCGAGTTCGAGTACTAG+AGG | + | chr3.1:66546822-66546841 | MS.gene70461:CDS | 50.0% | |
| AGCAACAAGCCTTCGAGCTT+AGG | - | chr3.1:66545821-66545840 | None:intergenic | 50.0% | |
| CAGTTCGAGCAATCTCTCAC+GGG | - | chr3.1:66544796-66544815 | None:intergenic | 50.0% | |
| CCAACTGAAGCCTTCATCTG+AGG | - | chr3.1:66542506-66542525 | None:intergenic | 50.0% | |
| CCAATTGCTGCTGCAAGTCT+CGG | + | chr3.1:66543179-66543198 | MS.gene70461:CDS | 50.0% | |
| CCTCAGATGAAGGCTTCAGT+TGG | + | chr3.1:66542503-66542522 | MS.gene70461:CDS | 50.0% | |
| CCTCATGAAACCGTGCAGAA+AGG | - | chr3.1:66545912-66545931 | None:intergenic | 50.0% | |
| CCTTTCTGCACGGTTTCATG+AGG | + | chr3.1:66545909-66545928 | MS.gene70461:intron | 50.0% | |
| CGAGTTCGAGTACTAGAGGT+AGG | + | chr3.1:66546826-66546845 | MS.gene70461:intron | 50.0% | |
| GAAGGAGGAAAACGGCTTCA+TGG | + | chr3.1:66542826-66542845 | MS.gene70461:CDS | 50.0% | |
| GACAGTCTGAACCTGTGCAT+AGG | - | chr3.1:66546426-66546445 | None:intergenic | 50.0% | |
| GACATTGTCTGCAATTGGGG+AGG | + | chr3.1:66545471-66545490 | MS.gene70461:CDS | 50.0% | |
| GGAAAACGGCTTCATGGCTA+AGG | + | chr3.1:66542832-66542851 | MS.gene70461:CDS | 50.0% | |
| GGAGGGCTCCAAGATCAATA+AGG | - | chr3.1:66545263-66545282 | None:intergenic | 50.0% | |
| TAGCACAAGACCAGCCATTC+CGG | + | chr3.1:66545596-66545615 | MS.gene70461:CDS | 50.0% | |
| TCTGCTCTTGATCTGGTGAC+TGG | - | chr3.1:66545453-66545472 | None:intergenic | 50.0% | |
| TTCTCCCCACAGAAAGCAAG+AGG | + | chr3.1:66543095-66543114 | MS.gene70461:CDS | 50.0% | |
| TTGATGGAAACCGGAATGGC+TGG | - | chr3.1:66545609-66545628 | None:intergenic | 50.0% | |
| TTTCACGCTGATCCACATCC+TGG | + | chr3.1:66544696-66544715 | MS.gene70461:CDS | 50.0% | |
| AAGGTCAACCCACCGAAGTC+CGG | + | chr3.1:66545735-66545754 | MS.gene70461:intron | 55.0% | |
| ATAAGGCAACGACAGCCCAC+AGG | + | chr3.1:66546530-66546549 | MS.gene70461:CDS | 55.0% | |
| CCGAGACTTGCAGCAGCAAT+TGG | - | chr3.1:66543182-66543201 | None:intergenic | 55.0% | |
| CCTTACAGCTGACAGATCCC+CGG | - | chr3.1:66545292-66545311 | None:intergenic | 55.0% | |
| GATTGCTGCACCCTATGCAC+AGG | + | chr3.1:66546412-66546431 | MS.gene70461:CDS | 55.0% | |
| GCAAAATGGGCATATCCGGG+TGG | + | chr3.1:66542613-66542632 | MS.gene70461:CDS | 55.0% | |
| GCTTTCTGTGGGGAGAAAGC+AGG | - | chr3.1:66543092-66543111 | None:intergenic | 55.0% | |
| TAAGGCAACGACAGCCCACA+GGG | + | chr3.1:66546531-66546550 | MS.gene70461:CDS | 55.0% | |
| TCTAGCGTAGGGTGACACCA+AGG | - | chr3.1:66546166-66546185 | None:intergenic | 55.0% | |
| TTGGTATGCCGGACTTCGGT+GGG | - | chr3.1:66545746-66545765 | None:intergenic | 55.0% | |
| TTTGGTATGCCGGACTTCGG+TGG | - | chr3.1:66545747-66545766 | None:intergenic | 55.0% | |
| ACAGCTGACAGATCCCCGGT+GGG | - | chr3.1:66545288-66545307 | None:intergenic | 60.0% | |
| CCGGGGATCTGTCAGCTGTA+AGG | + | chr3.1:66545289-66545308 | MS.gene70461:intron | 60.0% | |
| GCTATCTGCCCGACGAGTTG+TGG | - | chr3.1:66546557-66546576 | None:intergenic | 60.0% | |
| TACAGCTGACAGATCCCCGG+TGG | - | chr3.1:66545289-66545308 | None:intergenic | 60.0% | |
| TGCTGCTGCAAGTCTCGGTC+AGG | + | chr3.1:66543184-66543203 | MS.gene70461:CDS | 60.0% | |
| CCACAGGGCCACAACTCGTC+GGG | + | chr3.1:66546546-66546565 | MS.gene70461:CDS | 65.0% | |
| CCCACAGGGCCACAACTCGT+CGG | + | chr3.1:66546545-66546564 | MS.gene70461:CDS | 65.0% | |
| CCGACGAGTTGTGGCCCTGT+GGG | - | chr3.1:66546548-66546567 | None:intergenic | 65.0% | |
| CTGACAGATCCCCGGTGGGT+TGG | - | chr3.1:66545284-66545303 | None:intergenic | 65.0% | |
| CTTGGAGCCCTCCAACCCAC+CGG | + | chr3.1:66545270-66545289 | MS.gene70461:CDS | 65.0% | |
| TTGGAGCCCTCCAACCCACC+GGG | + | chr3.1:66545271-66545290 | MS.gene70461:CDS | 65.0% | |
| !! | ACAGATCCCCGGTGGGTTGG+AGG | - | chr3.1:66545281-66545300 | None:intergenic | 65.0% |
| !! | CAGATCCCCGGTGGGTTGGA+GGG | - | chr3.1:66545280-66545299 | None:intergenic | 65.0% |
| CCCGACGAGTTGTGGCCCTG+TGG | - | chr3.1:66546549-66546568 | None:intergenic | 70.0% | |
| TGGAGCCCTCCAACCCACCG+GGG | + | chr3.1:66545272-66545291 | MS.gene70461:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 66542088 | 66547347 | 66542088 | ID=MS.gene70461 |
| chr3.1 | mRNA | 66542088 | 66547347 | 66542088 | ID=MS.gene70461.t1;Parent=MS.gene70461 |
| chr3.1 | exon | 66542088 | 66542654 | 66542088 | ID=MS.gene70461.t1.exon1;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66542088 | 66542654 | 66542088 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66542819 | 66542962 | 66542819 | ID=MS.gene70461.t1.exon2;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66542819 | 66542962 | 66542819 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66543080 | 66543293 | 66543080 | ID=MS.gene70461.t1.exon3;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66543080 | 66543293 | 66543080 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66543719 | 66543812 | 66543719 | ID=MS.gene70461.t1.exon4;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66543719 | 66543812 | 66543719 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66543992 | 66544085 | 66543992 | ID=MS.gene70461.t1.exon5;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66543992 | 66544085 | 66543992 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66544279 | 66544333 | 66544279 | ID=MS.gene70461.t1.exon6;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66544279 | 66544333 | 66544279 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66544480 | 66544571 | 66544480 | ID=MS.gene70461.t1.exon7;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66544480 | 66544571 | 66544480 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66544678 | 66544848 | 66544678 | ID=MS.gene70461.t1.exon8;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66544678 | 66544848 | 66544678 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66545249 | 66545305 | 66545249 | ID=MS.gene70461.t1.exon9;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66545249 | 66545305 | 66545249 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66545409 | 66545492 | 66545409 | ID=MS.gene70461.t1.exon10;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66545409 | 66545492 | 66545409 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66545583 | 66545667 | 66545583 | ID=MS.gene70461.t1.exon11;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66545583 | 66545667 | 66545583 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66546372 | 66546433 | 66546372 | ID=MS.gene70461.t1.exon12;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66546372 | 66546433 | 66546372 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66546518 | 66546592 | 66546518 | ID=MS.gene70461.t1.exon13;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66546518 | 66546592 | 66546518 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66546739 | 66546843 | 66546739 | ID=MS.gene70461.t1.exon14;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66546739 | 66546843 | 66546739 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66547026 | 66547167 | 66547026 | ID=MS.gene70461.t1.exon15;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66547026 | 66547167 | 66547026 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| chr3.1 | exon | 66547274 | 66547347 | 66547274 | ID=MS.gene70461.t1.exon16;Parent=MS.gene70461.t1 |
| chr3.1 | CDS | 66547274 | 66547347 | 66547274 | ID=cds.MS.gene70461.t1;Parent=MS.gene70461.t1 |
| Gene Sequence |
| Protein sequence |
