AlfalfaGEDB | MS.gene73824

M. sativa cultivar XinJiangDaYe / MS.gene73824

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF13561.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene73824.t1	XP_003607490.2	98.6	285	4	0	1	285	1	285	2.10E-153	551.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene73824.t1	Q9M1K9	59.6	267	105	3	17	281	6	271	6.9e-84	312.0

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene73824.t1	G7JTV8	98.6	285	4	0	1	285	1	285	1.5e-153	551.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene25667	MS.gene73824	PPI
MS.gene85724	MS.gene73824	PPI
MS.gene73824	MS.gene07097	PPI
MS.gene80360	MS.gene73824	PPI
MS.gene23019	MS.gene73824	PPI
MS.gene014425	MS.gene73824	PPI
MS.gene73824	MS.gene50524	PPI
MS.gene007002	MS.gene73824	PPI
MS.gene018066	MS.gene73824	PPI
MS.gene28848	MS.gene73824	PPI
MS.gene87026	MS.gene73824	PPI
MS.gene73088	MS.gene73824	PPI
MS.gene73824	MS.gene04700	PPI
MS.gene73824	MS.gene31507	PPI
MS.gene07096	MS.gene73824	PPI
MS.gene54952	MS.gene73824	PPI
MS.gene050432	MS.gene73824	PPI
MS.gene42260	MS.gene73824	PPI
MS.gene25674	MS.gene73824	PPI
MS.gene52742	MS.gene73824	PPI
MS.gene007006	MS.gene73824	PPI
MS.gene072664	MS.gene73824	PPI
MS.gene28847	MS.gene73824	PPI
MS.gene87780	MS.gene73824	PPI
MS.gene044694	MS.gene73824	PPI
MS.gene028938	MS.gene73824	PPI
MS.gene03319	MS.gene73824	PPI
MS.gene065380	MS.gene73824	PPI
MS.gene064756	MS.gene73824	PPI
MS.gene42856	MS.gene73824	PPI
MS.gene52743	MS.gene73824	PPI
MS.gene73824	MS.gene039828	PPI
MS.gene50522	MS.gene73824	PPI
MS.gene73824	MS.gene055846	PPI
MS.gene024269	MS.gene73824	PPI
MS.gene42114	MS.gene73824	PPI
MS.gene006999	MS.gene73824	PPI
MS.gene050431	MS.gene73824	PPI
MS.gene019786	MS.gene73824	PPI
MS.gene043387	MS.gene73824	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene73824.t1	MTR_4g078630	98.596	285	4	0	1	285	1	285	0.0	578
MS.gene73824.t1	MTR_7g071680	46.786	280	132	6	15	279	25	302	1.01e-77	238
MS.gene73824.t1	MTR_4g052340	47.955	269	126	4	17	282	12	269	1.03e-74	229
MS.gene73824.t1	MTR_4g052350	46.886	273	127	4	15	282	10	269	1.10e-71	222
MS.gene73824.t1	MTR_4g052300	46.768	263	122	4	18	275	7	256	2.32e-70	218
MS.gene73824.t1	MTR_7g107670	45.946	259	133	5	17	272	31	285	3.32e-70	219
MS.gene73824.t1	MTR_4g052320	45.977	261	128	3	18	275	7	257	9.36e-69	214
MS.gene73824.t1	MTR_7g083870	45.588	272	137	7	17	284	33	297	2.07e-67	212
MS.gene73824.t1	MTR_7g110130	44.776	268	136	4	14	277	1	260	3.68e-66	207
MS.gene73824.t1	MTR_3g020670	45.091	275	144	4	5	274	1	273	8.24e-65	204
MS.gene73824.t1	MTR_6g023590	45.136	257	130	4	18	270	12	261	1.06e-64	204
MS.gene73824.t1	MTR_6g023990	45.076	264	134	4	11	270	6	262	7.27e-64	202
MS.gene73824.t1	MTR_6g023610	45.490	255	128	4	18	268	12	259	1.51e-63	201
MS.gene73824.t1	MTR_7g110160	46.241	266	110	5	14	274	1	238	1.64e-62	197
MS.gene73824.t1	MTR_2g090165	42.435	271	143	5	14	280	1	262	2.95e-62	197
MS.gene73824.t1	MTR_6g023910	42.857	266	141	3	18	279	12	270	6.57e-62	197
MS.gene73824.t1	MTR_7g105460	45.018	271	135	5	18	283	12	273	1.89e-61	196
MS.gene73824.t1	MTR_6g023600	44.922	256	130	4	18	269	12	260	4.61e-61	194
MS.gene73824.t1	MTR_7g110140	45.525	257	129	4	18	271	5	253	5.25e-61	194
MS.gene73824.t1	MTR_6g023950	46.484	256	126	5	18	269	12	260	1.66e-60	193
MS.gene73824.t1	MTR_6g023600	44.141	256	126	5	18	269	12	254	3.35e-57	184
MS.gene73824.t1	MTR_7g105580	40.613	261	126	6	17	274	6	240	5.26e-56	181
MS.gene73824.t1	MTR_7g105590	48.168	191	95	2	17	204	6	195	8.15e-55	176
MS.gene73824.t1	MTR_6g035395	41.538	260	134	5	17	276	3	244	2.75e-53	174
MS.gene73824.t1	MTR_3g113870	42.714	199	108	4	32	227	34	229	2.59e-47	158
MS.gene73824.t1	MTR_7g105570	44.554	202	101	4	84	283	38	230	8.12e-39	136
MS.gene73824.t1	MTR_4g084800	49.242	132	64	1	17	145	11	142	8.28e-36	125
MS.gene73824.t1	MTR_7g113650	29.811	265	158	7	18	269	39	288	5.39e-24	99.0
MS.gene73824.t1	MTR_1g082760	30.189	265	157	6	18	269	39	288	7.86e-24	98.6
MS.gene73824.t1	MTR_4g132850	30.682	264	159	7	16	272	4	250	1.17e-23	97.1
MS.gene73824.t1	MTR_3g085740	30.000	270	163	9	10	270	66	318	4.27e-21	91.3
MS.gene73824.t1	MTR_3g068155	28.958	259	165	8	19	271	19	264	9.00e-21	89.7
MS.gene73824.t1	MTR_7g094510	30.385	260	160	6	19	269	6	253	9.16e-21	89.4
MS.gene73824.t1	MTR_3g068070	29.167	264	158	9	19	271	15	260	1.41e-20	89.0
MS.gene73824.t1	MTR_4g131740	27.113	284	177	8	1	270	23	290	4.88e-20	88.2
MS.gene73824.t1	MTR_3g068065	30.000	260	163	9	19	272	17	263	8.93e-20	87.0
MS.gene73824.t1	MTR_3g068085	30.943	265	152	12	19	271	15	260	3.08e-19	85.5
MS.gene73824.t1	MTR_1196s0010	30.800	250	157	5	22	269	277	512	3.60e-19	87.4
MS.gene73824.t1	MTR_7g094520	29.008	262	163	7	19	270	11	259	4.05e-18	82.0
MS.gene73824.t1	MTR_7g063360	29.008	262	165	7	19	271	16	265	1.15e-17	80.9
MS.gene73824.t1	MTR_4g064887	28.044	271	152	11	19	271	15	260	9.62e-17	78.6
MS.gene73824.t1	MTR_1g051165	27.208	283	170	7	10	271	4	271	1.91e-16	77.8
MS.gene73824.t1	MTR_4g058810	28.676	272	173	7	11	271	2	263	3.46e-15	74.3
MS.gene73824.t1	MTR_4g058840	28.897	263	167	6	19	271	11	263	4.25e-15	73.9
MS.gene73824.t1	MTR_4g058820	28.897	263	167	6	19	271	11	263	4.25e-15	73.9
MS.gene73824.t1	MTR_7g063390	27.757	263	167	7	19	271	16	265	1.69e-14	72.0
MS.gene73824.t1	MTR_7g063260	27.547	265	167	5	19	272	16	266	3.38e-14	71.2
MS.gene73824.t1	MTR_8g096580	29.592	196	129	3	22	211	48	240	5.95e-14	71.2
MS.gene73824.t1	MTR_3g068175	27.206	272	179	8	6	271	4	262	1.73e-13	69.3
MS.gene73824.t1	MTR_7g063320	26.336	262	170	6	19	270	15	263	2.12e-13	68.9
MS.gene73824.t1	MTR_8g442750	29.021	286	162	11	5	270	1	265	2.47e-13	69.3
MS.gene73824.t1	MTR_4g086400	28.922	204	127	4	21	208	6	207	9.22e-13	68.6
MS.gene73824.t1	MTR_4g097510	31.771	192	115	6	22	205	5	188	1.11e-12	67.0
MS.gene73824.t1	MTR_1g068955	28.358	268	168	7	12	268	7	261	1.87e-12	66.6
MS.gene73824.t1	MTR_8g096620	27.638	199	128	5	16	205	42	233	3.51e-12	66.2
MS.gene73824.t1	MTR_7g063330	26.616	263	171	7	19	272	15	264	5.10e-12	65.1
MS.gene73824.t1	MTR_3g068175	26.449	276	180	9	6	271	4	266	9.45e-12	64.3
MS.gene73824.t1	MTR_7g063270	26.792	265	168	7	19	272	16	265	1.36e-11	63.9
MS.gene73824.t1	MTR_8g044240	26.531	196	129	4	25	207	75	268	3.47e-11	63.2
MS.gene73824.t1	MTR_7g076660	30.000	160	97	6	22	166	8	167	3.49e-11	62.8
MS.gene73824.t1	MTR_7g080410	28.774	212	126	8	22	212	41	248	4.01e-11	62.8
MS.gene73824.t1	MTR_4g086410	28.000	200	128	3	21	205	6	204	4.47e-11	63.5
MS.gene73824.t1	MTR_7g080410	29.245	212	125	8	22	212	41	248	4.79e-11	62.4
MS.gene73824.t1	MTR_7g076660	30.435	161	95	7	22	166	7	166	7.11e-11	62.0
MS.gene73824.t1	MTR_7g076655	31.447	159	92	7	24	166	9	166	9.71e-11	61.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene73824.t1	AT3G42960	58.889	270	108	3	15	282	4	272	1.59e-106	310
MS.gene73824.t1	AT3G51680	46.520	273	135	3	14	275	27	299	2.16e-72	225
MS.gene73824.t1	AT3G26770	45.977	261	131	7	17	272	39	294	2.86e-67	212
MS.gene73824.t1	AT2G47140	45.946	259	129	4	14	269	1	251	1.27e-66	208
MS.gene73824.t1	AT3G26760	42.803	264	145	5	17	276	34	295	2.13e-63	202
MS.gene73824.t1	AT4G03140	42.966	263	143	5	17	276	76	334	6.60e-63	202
MS.gene73824.t1	AT2G47120	41.634	257	137	5	18	271	6	252	3.87e-58	187
MS.gene73824.t1	AT2G47120	41.634	257	137	5	18	271	5	251	4.19e-58	187
MS.gene73824.t1	AT3G29250	42.692	260	132	6	18	271	5	253	1.57e-57	185
MS.gene73824.t1	AT3G29250	41.573	267	139	6	11	271	34	289	4.16e-57	185
MS.gene73824.t1	AT3G29260	42.045	264	135	6	14	271	1	252	4.80e-57	184
MS.gene73824.t1	AT2G47130	40.467	257	141	3	18	271	5	252	2.93e-56	182
MS.gene73824.t1	AT3G29250	42.471	259	132	6	19	271	44	291	4.40e-56	183
MS.gene73824.t1	AT1G52340	42.264	265	144	3	17	274	16	278	1.55e-55	181
MS.gene73824.t1	AT2G47150	28.800	250	120	5	21	270	3	194	2.27e-23	95.1
MS.gene73824.t1	AT2G29310	27.857	280	159	8	19	282	7	259	4.32e-22	93.2
MS.gene73824.t1	AT1G54870	28.679	265	161	6	18	269	81	330	9.00e-22	93.6
MS.gene73824.t1	AT1G54870	28.679	265	161	6	18	269	83	332	9.99e-22	93.6
MS.gene73824.t1	AT3G03980	30.037	273	157	8	16	269	11	268	2.32e-21	91.3
MS.gene73824.t1	AT4G05530	30.827	266	156	9	16	272	6	252	1.03e-20	89.4
MS.gene73824.t1	AT5G06060	28.958	259	165	7	19	271	9	254	1.72e-20	89.0
MS.gene73824.t1	AT5G18210	30.943	265	153	8	19	268	8	257	2.28e-20	88.6
MS.gene73824.t1	AT3G04000	28.676	272	163	7	16	269	11	269	2.45e-20	88.6
MS.gene73824.t1	AT5G18210	32.271	251	140	8	19	254	8	243	4.13e-20	88.2
MS.gene73824.t1	AT3G05260	29.930	284	167	10	1	270	20	285	6.62e-20	87.8
MS.gene73824.t1	AT2G30670	27.170	265	162	7	19	271	7	252	1.14e-19	86.7
MS.gene73824.t1	AT2G29330	27.899	276	164	8	19	282	7	259	4.73e-19	84.7
MS.gene73824.t1	AT1G24360	29.304	273	161	9	5	270	70	317	1.04e-18	84.7
MS.gene73824.t1	AT2G29320	27.437	277	165	8	19	282	13	266	8.16e-18	81.6
MS.gene73824.t1	AT2G29360	25.993	277	179	9	5	271	1	261	1.51e-17	80.9
MS.gene73824.t1	AT2G29290	28.261	276	163	9	19	282	7	259	1.58e-17	80.5
MS.gene73824.t1	AT2G29340	26.786	280	162	8	19	282	7	259	2.37e-17	80.1
MS.gene73824.t1	AT1G07450	27.863	262	163	9	19	271	8	252	2.65e-17	80.1
MS.gene73824.t1	AT2G29350	26.996	263	160	8	21	271	17	259	3.11e-17	80.1
MS.gene73824.t1	AT2G29150	29.151	271	160	9	11	269	8	258	3.35e-17	79.7
MS.gene73824.t1	AT2G29260	28.571	266	157	8	19	271	68	313	3.56e-17	80.5
MS.gene73824.t1	AT2G29340	26.786	280	162	8	19	282	7	259	4.51e-17	80.1
MS.gene73824.t1	AT1G63380	28.676	272	172	8	12	271	14	275	6.93e-17	79.3
MS.gene73824.t1	AT1G63380	28.676	272	172	8	12	271	7	268	7.29e-17	79.0
MS.gene73824.t1	AT1G63380	28.623	276	176	7	7	271	5	270	8.17e-17	79.0
MS.gene73824.t1	AT1G63380	28.676	272	172	8	12	271	11	272	8.22e-17	79.0
MS.gene73824.t1	AT2G29300	25.843	267	164	8	19	271	7	253	9.63e-17	78.6
MS.gene73824.t1	AT2G29310	27.039	233	138	7	55	282	52	257	1.07e-16	78.2
MS.gene73824.t1	AT1G62610	28.159	277	178	6	6	271	1	267	1.11e-16	78.6
MS.gene73824.t1	AT2G29300	25.843	267	164	8	19	271	7	253	1.49e-16	78.2
MS.gene73824.t1	AT1G62610	27.305	282	180	7	1	271	1	268	1.68e-16	78.2
MS.gene73824.t1	AT2G29370	27.437	277	175	10	5	271	1	261	1.69e-16	77.8
MS.gene73824.t1	AT1G62610	28.309	272	173	7	12	271	5	266	1.74e-16	77.8
MS.gene73824.t1	AT1G07440	27.957	279	159	10	19	282	12	263	1.82e-16	77.8
MS.gene73824.t1	AT3G55290	30.303	264	162	8	19	271	18	270	1.92e-16	77.8
MS.gene73824.t1	AT1G62610	28.309	272	173	7	12	271	11	272	1.99e-16	77.8
MS.gene73824.t1	AT3G55290	29.545	264	164	7	19	271	17	269	2.14e-16	77.8
MS.gene73824.t1	AT3G55310	29.699	266	161	8	19	271	17	269	2.34e-16	77.8
MS.gene73824.t1	AT4G13180	28.520	277	171	9	5	270	1	261	4.36e-16	76.6
MS.gene73824.t1	AT2G29310	29.648	199	119	5	19	205	7	196	5.88e-16	75.1
MS.gene73824.t1	AT2G29290	27.948	229	141	7	55	282	37	242	1.71e-14	72.0
MS.gene73824.t1	AT1G49670	28.502	207	118	4	21	205	6	204	2.37e-14	73.6
MS.gene73824.t1	AT1G49670	28.502	207	118	4	21	205	6	204	2.89e-14	73.2
MS.gene73824.t1	AT5G50770	31.553	206	124	6	7	205	38	233	4.52e-14	71.6
MS.gene73824.t1	AT2G29350	28.934	197	119	6	21	205	17	204	5.42e-14	70.1
MS.gene73824.t1	AT2G29350	26.368	201	133	5	72	271	35	221	1.10e-13	69.3
MS.gene73824.t1	AT3G46170	26.937	271	177	7	12	271	18	278	4.45e-13	68.6
MS.gene73824.t1	AT5G50600	28.571	245	149	9	4	232	31	265	4.56e-13	68.9
MS.gene73824.t1	AT5G50700	28.571	245	149	9	4	232	31	265	4.56e-13	68.9
MS.gene73824.t1	AT2G17845	28.195	266	164	9	19	269	47	300	8.27e-13	67.8
MS.gene73824.t1	AT2G29320	27.230	213	136	6	72	282	53	248	9.99e-13	67.0
MS.gene73824.t1	AT2G29320	28.788	198	119	6	19	203	13	201	3.90e-12	64.7
MS.gene73824.t1	AT3G47350	29.358	218	131	7	21	225	46	253	6.22e-12	65.5
MS.gene73824.t1	AT3G47350	28.634	227	139	7	12	225	37	253	7.92e-12	65.1
MS.gene73824.t1	AT2G29340	27.979	193	118	5	19	199	7	190	8.86e-12	63.5
MS.gene73824.t1	AT2G29340	27.979	193	118	5	19	199	7	190	8.86e-12	63.5

Find 44 sgRNAs with CRISPR-Local

Find 64 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCAAAATTATTTGCAGAAAA+TGG	0.160943	4.2:+31354026	MS.gene73824:CDS
TGATTCAATGTCAGATTCTT+TGG	0.249438	4.2:-31354138	None:intergenic
CTCAAAATTTAGCTCCAAAA+AGG	0.265907	4.2:+31353867	MS.gene73824:CDS
ATGAATGCAAGTTTGCTTAA+AGG	0.265952	4.2:+31354724	MS.gene73824:CDS
GAACAATTGAGTGAGTTTAT+TGG	0.274099	4.2:+31354700	MS.gene73824:CDS
TTACTTTCAATCAATCTCTT+TGG	0.274120	4.2:+31354403	MS.gene73824:CDS
GCTCATAATCTTTCAGTTGA+TGG	0.326713	4.2:+31354820	MS.gene73824:CDS
TGAATGCAAGTTTGCTTAAA+GGG	0.337129	4.2:+31354725	MS.gene73824:CDS
TTTCTCTTCACTTAGGATCT+TGG	0.355190	4.2:-31354882	None:intergenic
AGAAGTGCGGCGTGTGAATT+AGG	0.357629	4.2:+31354577	MS.gene73824:CDS
TTCAACAATGCAGGAATTGC+AGG	0.375946	4.2:+31354206	MS.gene73824:CDS
TTGCAGCATGTTTGATTCCA+TGG	0.396161	4.2:-31354432	None:intergenic
CAGTTAACCTTTCAATATCA+TGG	0.401447	4.2:+31354162	MS.gene73824:CDS
ACAGGTGGTGCAAGAGGAAT+TGG	0.404629	4.2:+31353993	MS.gene73824:CDS
TGTTGAACATTATGTCCAAT+TGG	0.431580	4.2:-31354190	None:intergenic
GGTAAGGTAGCAGTTATAAC+AGG	0.432290	4.2:+31353975	MS.gene73824:CDS
AATATCATGGAAAGGCCAAT+TGG	0.441411	4.2:+31354175	MS.gene73824:CDS
TCAAGTGCAGCTGCAACTAT+AGG	0.447304	4.2:+31354499	MS.gene73824:CDS
CCCGTAATTGCAGGCTATGA+AGG	0.465657	4.2:+31354340	MS.gene73824:intron
GACATAATGTTCAACAATGC+AGG	0.481153	4.2:+31354197	MS.gene73824:CDS
AGGGTTGCTGAATCAATTGA+TGG	0.484224	4.2:+31354092	MS.gene73824:CDS
AATCTCTTTGGAACAATCCA+TGG	0.489840	4.2:+31354415	MS.gene73824:CDS
TACAATGTCAAAATCAGCTA+TGG	0.496795	4.2:+31354543	MS.gene73824:CDS
GGCCTTTCCATGATATTGAA+AGG	0.509972	4.2:-31354169	None:intergenic
TTCTAGATGAAGAAGGCACC+AGG	0.520405	4.2:+31354072	MS.gene73824:CDS
AACCTTTCAATATCATGGAA+AGG	0.544623	4.2:+31354167	MS.gene73824:CDS
GCAAGTTTGCTTAAAGGGAG+AGG	0.554131	4.2:+31354730	MS.gene73824:CDS
GTTAATTGTGTTTCTCCGCA+CGG	0.557216	4.2:+31354616	MS.gene73824:CDS
CATAATCTTTCAGTTGATGG+TGG	0.564721	4.2:+31354823	MS.gene73824:CDS
ATGTCAAAATCAGCTATGGA+TGG	0.568969	4.2:+31354547	MS.gene73824:CDS
ATCAATTGATTCAGCAACCC+TGG	0.571405	4.2:-31354090	None:intergenic
AAGCATAACAACACTTGACA+TGG	0.580277	4.2:+31354366	MS.gene73824:CDS
GCTGATGTTCTAGATGAAGA+AGG	0.589049	4.2:+31354065	MS.gene73824:CDS
GTTATAACAGGTGGTGCAAG+AGG	0.590120	4.2:+31353987	MS.gene73824:CDS
AGTGCAGCTGCAACTATAGG+TGG	0.592641	4.2:+31354502	MS.gene73824:CDS
AACAACTGATGATGTTGCAC+AGG	0.603862	4.2:+31354756	MS.gene73824:CDS
GCATTCAAAAGCATCTCAGA+AGG	0.609801	4.2:-31354643	None:intergenic
ATAGGTGGATTCGCTTCACA+TGG	0.610255	4.2:+31354517	MS.gene73824:CDS
GCTGCAAAAGCAATGATCAA+AGG	0.629252	4.2:+31354448	MS.gene73824:CDS
AAGGTAGCAGTTATAACAGG+TGG	0.652683	4.2:+31353978	MS.gene73824:CDS
ATCTCAGAAGGAACGCCGTG+CGG	0.661162	4.2:-31354631	None:intergenic
GGATGGATTAATGAGAAGTG+CGG	0.667924	4.2:+31354564	MS.gene73824:CDS
TCTAGATGAAGAAGGCACCA+GGG	0.716790	4.2:+31354073	MS.gene73824:CDS
TCTACATTCTGAATCATACG+TGG	0.728605	4.2:-31353842	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GAAATTTAATATCATATGAT+AGG	-	chr4.2:31353925-31353944	None:intergenic	15.0%
!!!	GAATTTTGAAGAAAAAAAAA+TGG	+	chr4.2:31354254-31354273	MS.gene73824:intron	15.0%
!!!	TTTCTTTTGAAATGTTTTTA+AGG	+	chr4.2:31353946-31353965	MS.gene73824:intron	15.0%
!!!	ATAGTTTTGTTTCGATATTT+AGG	+	chr4.2:31354288-31354307	MS.gene73824:intron	20.0%
!!!	TTGAATGCTTTTAAATGTTA+CGG	+	chr4.2:31354658-31354677	MS.gene73824:CDS	20.0%
!	GCAAAATTATTTGCAGAAAA+TGG	+	chr4.2:31354026-31354045	MS.gene73824:CDS	25.0%
!	TTACTTTCAATCAATCTCTT+TGG	+	chr4.2:31354403-31354422	MS.gene73824:CDS	25.0%
!!	AACAAGATTACTAACCTTTT+TGG	-	chr4.2:31353884-31353903	None:intergenic	25.0%
	AACCTTTCAATATCATGGAA+AGG	+	chr4.2:31354167-31354186	MS.gene73824:CDS	30.0%
	ATGATCAAAGGTAAAAAAGG+AGG	+	chr4.2:31354460-31354479	MS.gene73824:CDS	30.0%
	CAGTTAACCTTTCAATATCA+TGG	+	chr4.2:31354162-31354181	MS.gene73824:CDS	30.0%
	GAACAATTGAGTGAGTTTAT+TGG	+	chr4.2:31354700-31354719	MS.gene73824:CDS	30.0%
	GCAATGATCAAAGGTAAAAA+AGG	+	chr4.2:31354457-31354476	MS.gene73824:CDS	30.0%
	TACAATGTCAAAATCAGCTA+TGG	+	chr4.2:31354543-31354562	MS.gene73824:CDS	30.0%
	TGATTCAATGTCAGATTCTT+TGG	-	chr4.2:31354141-31354160	None:intergenic	30.0%
	TGTTGAACATTATGTCCAAT+TGG	-	chr4.2:31354193-31354212	None:intergenic	30.0%
!	ATGAATGCAAGTTTGCTTAA+AGG	+	chr4.2:31354724-31354743	MS.gene73824:CDS	30.0%
!	CTCAAAATTTAGCTCCAAAA+AGG	+	chr4.2:31353867-31353886	MS.gene73824:CDS	30.0%
!	GTTTCGATATTTAGGTTCAT+CGG	+	chr4.2:31354296-31354315	MS.gene73824:intron	30.0%
!	TGAATGCAAGTTTGCTTAAA+GGG	+	chr4.2:31354725-31354744	MS.gene73824:CDS	30.0%
!!!	GAAATGTTTTTAAGGCTACT+AGG	+	chr4.2:31353954-31353973	MS.gene73824:intron	30.0%
	AAGCATAACAACACTTGACA+TGG	+	chr4.2:31354366-31354385	MS.gene73824:CDS	35.0%
	AATATCATGGAAAGGCCAAT+TGG	+	chr4.2:31354175-31354194	MS.gene73824:CDS	35.0%
	ATGTCAAAATCAGCTATGGA+TGG	+	chr4.2:31354547-31354566	MS.gene73824:CDS	35.0%
	GACATAATGTTCAACAATGC+AGG	+	chr4.2:31354197-31354216	MS.gene73824:CDS	35.0%
	GCTCATAATCTTTCAGTTGA+TGG	+	chr4.2:31354820-31354839	MS.gene73824:CDS	35.0%
	TCTACATTCTGAATCATACG+TGG	-	chr4.2:31353845-31353864	None:intergenic	35.0%
!	ATTTAGGTTCATCGGATCAT+TGG	+	chr4.2:31354304-31354323	MS.gene73824:intron	35.0%
!!	AATCTCTTTGGAACAATCCA+TGG	+	chr4.2:31354415-31354434	MS.gene73824:CDS	35.0%
!!	CATAATCTTTCAGTTGATGG+TGG	+	chr4.2:31354823-31354842	MS.gene73824:CDS	35.0%
!!!	GTTTTTAAGGCTACTAGGTA+AGG	+	chr4.2:31353959-31353978	MS.gene73824:intron	35.0%
!!!	TTTTTGGCTAGTGATGAATC+TGG	+	chr4.2:31354787-31354806	MS.gene73824:CDS	35.0%
	AAGGTAGCAGTTATAACAGG+TGG	+	chr4.2:31353978-31353997	MS.gene73824:CDS	40.0%
	AGGGTTGCTGAATCAATTGA+TGG	+	chr4.2:31354092-31354111	MS.gene73824:CDS	40.0%
	GCTGCAAAAGCAATGATCAA+AGG	+	chr4.2:31354448-31354467	MS.gene73824:CDS	40.0%
	GGCCTTTCCATGATATTGAA+AGG	-	chr4.2:31354172-31354191	None:intergenic	40.0%
	GGTAAGGTAGCAGTTATAAC+AGG	+	chr4.2:31353975-31353994	MS.gene73824:CDS	40.0%
	GTTAATTGTGTTTCTCCGCA+CGG	+	chr4.2:31354616-31354635	MS.gene73824:CDS	40.0%
	TCCTTCATAGCCTGCAATTA+CGG	-	chr4.2:31354344-31354363	None:intergenic	40.0%
	TTCAACAATGCAGGAATTGC+AGG	+	chr4.2:31354206-31354225	MS.gene73824:CDS	40.0%
	TTGCAGCATGTTTGATTCCA+TGG	-	chr4.2:31354435-31354454	None:intergenic	40.0%
!	AACAACTGATGATGTTGCAC+AGG	+	chr4.2:31354756-31354775	MS.gene73824:CDS	40.0%
!	ATCAATTGATTCAGCAACCC+TGG	-	chr4.2:31354093-31354112	None:intergenic	40.0%
!	GCTGATGTTCTAGATGAAGA+AGG	+	chr4.2:31354065-31354084	MS.gene73824:CDS	40.0%
!!	GCATTCAAAAGCATCTCAGA+AGG	-	chr4.2:31354646-31354665	None:intergenic	40.0%
!!	GGATGGATTAATGAGAAGTG+CGG	+	chr4.2:31354564-31354583	MS.gene73824:CDS	40.0%
	ACAATGCAGGAATTGCAGGT+AGG	+	chr4.2:31354210-31354229	MS.gene73824:intron	45.0%
	CCTTCATAGCCTGCAATTAC+GGG	-	chr4.2:31354343-31354362	None:intergenic	45.0%
	GTTATAACAGGTGGTGCAAG+AGG	+	chr4.2:31353987-31354006	MS.gene73824:CDS	45.0%
	TCAAGTGCAGCTGCAACTAT+AGG	+	chr4.2:31354499-31354518	MS.gene73824:CDS	45.0%
!	ATAGGTGGATTCGCTTCACA+TGG	+	chr4.2:31354517-31354536	MS.gene73824:CDS	45.0%
!	GCAAGTTTGCTTAAAGGGAG+AGG	+	chr4.2:31354730-31354749	MS.gene73824:CDS	45.0%
!	GGTTCATCGGATCATTGGTT+TGG	+	chr4.2:31354309-31354328	MS.gene73824:intron	45.0%
!	TGCACAGGCTGTTCTGTTTT+TGG	+	chr4.2:31354771-31354790	MS.gene73824:CDS	45.0%
!!	TCTAGATGAAGAAGGCACCA+GGG	+	chr4.2:31354073-31354092	MS.gene73824:CDS	45.0%
!!	TTCTAGATGAAGAAGGCACC+AGG	+	chr4.2:31354072-31354091	MS.gene73824:CDS	45.0%
	ACAGGTGGTGCAAGAGGAAT+TGG	+	chr4.2:31353993-31354012	MS.gene73824:CDS	50.0%
	AGTGCAGCTGCAACTATAGG+TGG	+	chr4.2:31354502-31354521	MS.gene73824:CDS	50.0%
	CCCGTAATTGCAGGCTATGA+AGG	+	chr4.2:31354340-31354359	MS.gene73824:intron	50.0%
	GGAATTGCAGGTAGGTGCAA+TGG	+	chr4.2:31354218-31354237	MS.gene73824:intron	50.0%
	GTTCTAACGCCCGTAATTGC+AGG	+	chr4.2:31354331-31354350	MS.gene73824:intron	50.0%
	TGCAGGTAGGTGCAATGGAA+TGG	+	chr4.2:31354223-31354242	MS.gene73824:intron	50.0%
!	AGAAGTGCGGCGTGTGAATT+AGG	+	chr4.2:31354577-31354596	MS.gene73824:CDS	50.0%
	ATCTCAGAAGGAACGCCGTG+CGG	-	chr4.2:31354634-31354653	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	31353836	31354897	31353836	ID=MS.gene73824
chr4.2	mRNA	31353836	31354897	31353836	ID=MS.gene73824.t1;Parent=MS.gene73824
chr4.2	exon	31353836	31353888	31353836	ID=MS.gene73824.t1.exon1;Parent=MS.gene73824.t1
chr4.2	CDS	31353836	31353888	31353836	ID=cds.MS.gene73824.t1;Parent=MS.gene73824.t1
chr4.2	exon	31353968	31354227	31353968	ID=MS.gene73824.t1.exon2;Parent=MS.gene73824.t1
chr4.2	CDS	31353968	31354227	31353968	ID=cds.MS.gene73824.t1;Parent=MS.gene73824.t1
chr4.2	exon	31354353	31354897	31354353	ID=MS.gene73824.t1.exon3;Parent=MS.gene73824.t1
chr4.2	CDS	31354353	31354897	31354353	ID=cds.MS.gene73824.t1;Parent=MS.gene73824.t1

Gene Sequence

>MS.gene73824

ATGGAGCCACGTATGATTCAGAATGTAGAATCTCAAAATTTAGCTCCAAAAAGGTTAGTAATCTTGTTGATATATAGTCTCATTTACCTATCATATGATATTAAATTTCTTTTCTTTTGAAATGTTTTTAAGGCTACTAGGTAAGGTAGCAGTTATAACAGGTGGTGCAAGAGGAATTGGTGCTGCAACAGCAAAATTATTTGCAGAAAATGGAGCACATGTCATCATTGCTGATGTTCTAGATGAAGAAGGCACCAGGGTTGCTGAATCAATTGATGGTCTCTACATACACTGTGATGTATCCAAAGAATCTGACATTGAATCAGCAGTTAACCTTTCAATATCATGGAAAGGCCAATTGGACATAATGTTCAACAATGCAGGAATTGCAGGTAGGTGCAATGGAATGGTTTATTTTGAATTTTGAAGAAAAAAAAATGGAATTAATTTATATAGTTTTGTTTCGATATTTAGGTTCATCGGATCATTGGTTTGGTTCTAACGCCCGTAATTGCAGGCTATGAAGGAAGAAGCATAACAACACTTGACATGGAAAAACTGACTCATTTACTTTCAATCAATCTCTTTGGAACAATCCATGGAATCAAACATGCTGCAAAAGCAATGATCAAAGGTAAAAAAGGAGGATCAATTATTTGTACATCAAGTGCAGCTGCAACTATAGGTGGATTCGCTTCACATGGTTATACAATGTCAAAATCAGCTATGGATGGATTAATGAGAAGTGCGGCGTGTGAATTAGGCGTTCATTTGATTCGTGTTAATTGTGTTTCTCCGCACGGCGTTCCTTCTGAGATGCTTTTGAATGCTTTTAAATGTTACGGTGAAGTTGATATGACTAGTGAACAATTGAGTGAGTTTATTGGTATGAATGCAAGTTTGCTTAAAGGGAGAGGTGCAACAACTGATGATGTTGCACAGGCTGTTCTGTTTTTGGCTAGTGATGAATCTGGATTTGTAACTGCTCATAATCTTTCAGTTGATGGTGGAATCACATCTGCTAATAGTGTTATGAGTTTCATCTACCAAGATCCTAAGTGA

Protein sequence

>MS.gene73824.t1

MEPRMIQNVESQNLAPKRLLGKVAVITGGARGIGAATAKLFAENGAHVIIADVLDEEGTRVAESIDGLYIHCDVSKESDIESAVNLSISWKGQLDIMFNNAGIAGYEGRSITTLDMEKLTHLLSINLFGTIHGIKHAAKAMIKGKKGGSIICTSSAAATIGGFASHGYTMSKSAMDGLMRSAACELGVHLIRVNCVSPHGVPSEMLLNAFKCYGEVDMTSEQLSEFIGMNASLLKGRGATTDDVAQAVLFLASDESGFVTAHNLSVDGGITSANSVMSFIYQDPK