Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28847.t1 | XP_003626026.1 | 94 | 266 | 15 | 1 | 1 | 265 | 1 | 266 | 5.70E-132 | 480.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28847.t1 | Q94K41 | 62.9 | 256 | 94 | 1 | 1 | 256 | 1 | 255 | 4.0e-86 | 319.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28847.t1 | G7KTR4 | 94.0 | 266 | 15 | 1 | 1 | 265 | 1 | 266 | 4.1e-132 | 480.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049217 | MS.gene28847 | 0.836622 | 8.40E-57 | -1.69E-46 |
MS.gene049222 | MS.gene28847 | 0.803046 | 4.20E-49 | -1.69E-46 |
MS.gene049285 | MS.gene28847 | 0.813139 | 2.98E-51 | -1.69E-46 |
MS.gene049320 | MS.gene28847 | 0.822788 | 1.96E-53 | -1.69E-46 |
MS.gene049351 | MS.gene28847 | 0.802188 | 6.32E-49 | -1.69E-46 |
MS.gene049356 | MS.gene28847 | 0.808273 | 3.36E-50 | -1.69E-46 |
MS.gene049427 | MS.gene28847 | 0.843813 | 1.11E-58 | -1.69E-46 |
MS.gene049609 | MS.gene28847 | 0.80694 | 6.44E-50 | -1.69E-46 |
MS.gene049661 | MS.gene28847 | 0.826808 | 2.21E-54 | -1.69E-46 |
MS.gene049662 | MS.gene28847 | 0.816182 | 6.31E-52 | -1.69E-46 |
MS.gene049805 | MS.gene28847 | 0.8281 | 1.08E-54 | -1.69E-46 |
MS.gene050076 | MS.gene28847 | 0.897393 | 1.47E-76 | -1.69E-46 |
MS.gene050163 | MS.gene28847 | 0.815455 | 9.17E-52 | -1.69E-46 |
MS.gene050301 | MS.gene28847 | 0.802173 | 6.36E-49 | -1.69E-46 |
MS.gene050432 | MS.gene28847 | 0.953494 | 2.42E-111 | -1.69E-46 |
MS.gene050520 | MS.gene28847 | 0.802272 | 6.07E-49 | -1.69E-46 |
MS.gene050538 | MS.gene28847 | 0.800195 | 1.62E-48 | -1.69E-46 |
MS.gene050767 | MS.gene28847 | 0.868906 | 4.61E-66 | -1.69E-46 |
MS.gene050770 | MS.gene28847 | 0.871548 | 6.28E-67 | -1.69E-46 |
MS.gene050772 | MS.gene28847 | 0.825115 | 5.59E-54 | -1.69E-46 |
MS.gene050783 | MS.gene28847 | 0.811543 | 6.64E-51 | -1.69E-46 |
MS.gene05100 | MS.gene28847 | 0.821312 | 4.32E-53 | -1.69E-46 |
MS.gene05101 | MS.gene28847 | 0.826066 | 3.33E-54 | -1.69E-46 |
MS.gene05105 | MS.gene28847 | 0.824673 | 7.11E-54 | -1.69E-46 |
MS.gene051228 | MS.gene28847 | 0.854253 | 1.39E-61 | -1.69E-46 |
MS.gene051471 | MS.gene28847 | 0.801079 | 1.07E-48 | -1.69E-46 |
MS.gene051666 | MS.gene28847 | 0.852353 | 4.88E-61 | -1.69E-46 |
MS.gene051692 | MS.gene28847 | 0.827463 | 1.54E-54 | -1.69E-46 |
MS.gene051810 | MS.gene28847 | 0.82406 | 9.91E-54 | -1.69E-46 |
MS.gene051858 | MS.gene28847 | 0.805202 | 1.50E-49 | -1.69E-46 |
MS.gene051877 | MS.gene28847 | 0.833614 | 4.82E-56 | -1.69E-46 |
MS.gene052078 | MS.gene28847 | 0.820353 | 7.17E-53 | -1.69E-46 |
MS.gene052271 | MS.gene28847 | 0.852019 | 6.08E-61 | -1.69E-46 |
MS.gene052290 | MS.gene28847 | 0.849548 | 3.01E-60 | -1.69E-46 |
MS.gene052310 | MS.gene28847 | 0.814997 | 1.16E-51 | -1.69E-46 |
MS.gene052326 | MS.gene28847 | 0.837629 | 4.64E-57 | -1.69E-46 |
MS.gene052379 | MS.gene28847 | 0.861242 | 1.18E-63 | -1.69E-46 |
MS.gene052481 | MS.gene28847 | 0.825872 | 3.70E-54 | -1.69E-46 |
MS.gene052484 | MS.gene28847 | 0.851381 | 9.21E-61 | -1.69E-46 |
MS.gene052485 | MS.gene28847 | 0.824169 | 9.34E-54 | -1.69E-46 |
MS.gene052615 | MS.gene28847 | 0.819886 | 9.18E-53 | -1.69E-46 |
MS.gene053009 | MS.gene28847 | 0.801154 | 1.03E-48 | -1.69E-46 |
MS.gene053103 | MS.gene28847 | 0.858548 | 7.64E-63 | -1.69E-46 |
MS.gene053104 | MS.gene28847 | 0.879667 | 1.03E-69 | -1.69E-46 |
MS.gene053107 | MS.gene28847 | 0.83318 | 6.18E-56 | -1.69E-46 |
MS.gene053207 | MS.gene28847 | 0.854677 | 1.05E-61 | -1.69E-46 |
MS.gene053209 | MS.gene28847 | 0.857295 | 1.80E-62 | -1.69E-46 |
MS.gene053213 | MS.gene28847 | 0.837221 | 5.91E-57 | -1.69E-46 |
MS.gene053286 | MS.gene28847 | 0.829499 | 4.98E-55 | -1.69E-46 |
MS.gene053322 | MS.gene28847 | 0.878996 | 1.79E-69 | -1.69E-46 |
MS.gene053632 | MS.gene28847 | 0.866249 | 3.27E-65 | -1.69E-46 |
MS.gene053915 | MS.gene28847 | 0.805283 | 1.44E-49 | -1.69E-46 |
MS.gene053916 | MS.gene28847 | 0.826882 | 2.13E-54 | -1.69E-46 |
MS.gene054376 | MS.gene28847 | 0.852598 | 4.16E-61 | -1.69E-46 |
MS.gene054600 | MS.gene28847 | 0.834434 | 3.00E-56 | -1.69E-46 |
MS.gene054642 | MS.gene28847 | 0.85169 | 7.53E-61 | -1.69E-46 |
MS.gene054802 | MS.gene28847 | 0.858438 | 8.24E-63 | -1.69E-46 |
MS.gene054803 | MS.gene28847 | 0.858077 | 1.05E-62 | -1.69E-46 |
MS.gene054804 | MS.gene28847 | 0.860498 | 1.98E-63 | -1.69E-46 |
MS.gene054955 | MS.gene28847 | 0.800629 | 1.32E-48 | -1.69E-46 |
MS.gene05505 | MS.gene28847 | 0.827366 | 1.63E-54 | -1.69E-46 |
MS.gene055116 | MS.gene28847 | 0.807344 | 5.29E-50 | -1.69E-46 |
MS.gene055206 | MS.gene28847 | 0.839648 | 1.40E-57 | -1.69E-46 |
MS.gene055212 | MS.gene28847 | 0.828248 | 9.99E-55 | -1.69E-46 |
MS.gene055254 | MS.gene28847 | 0.845143 | 4.88E-59 | -1.69E-46 |
MS.gene055277 | MS.gene28847 | 0.84969 | 2.75E-60 | -1.69E-46 |
MS.gene055289 | MS.gene28847 | 0.830844 | 2.34E-55 | -1.69E-46 |
MS.gene055362 | MS.gene28847 | 0.807402 | 5.14E-50 | -1.69E-46 |
MS.gene055390 | MS.gene28847 | 0.814835 | 1.26E-51 | -1.69E-46 |
MS.gene055397 | MS.gene28847 | 0.860005 | 2.79E-63 | -1.69E-46 |
MS.gene055412 | MS.gene28847 | 0.833633 | 4.77E-56 | -1.69E-46 |
MS.gene055428 | MS.gene28847 | 0.814003 | 1.92E-51 | -1.69E-46 |
MS.gene055499 | MS.gene28847 | 0.849044 | 4.16E-60 | -1.69E-46 |
MS.gene055502 | MS.gene28847 | 0.802666 | 5.03E-49 | -1.69E-46 |
MS.gene055633 | MS.gene28847 | 0.802825 | 4.67E-49 | -1.69E-46 |
MS.gene055636 | MS.gene28847 | 0.805657 | 1.20E-49 | -1.69E-46 |
MS.gene055638 | MS.gene28847 | 0.809801 | 1.58E-50 | -1.69E-46 |
MS.gene055647 | MS.gene28847 | 0.82385 | 1.11E-53 | -1.69E-46 |
MS.gene055722 | MS.gene28847 | 0.839034 | 2.02E-57 | -1.69E-46 |
MS.gene055896 | MS.gene28847 | 0.814793 | 1.29E-51 | -1.69E-46 |
MS.gene05592 | MS.gene28847 | 0.857138 | 2.00E-62 | -1.69E-46 |
MS.gene055941 | MS.gene28847 | 0.810717 | 1.00E-50 | -1.69E-46 |
MS.gene05602 | MS.gene28847 | 0.80974 | 1.63E-50 | -1.69E-46 |
MS.gene056374 | MS.gene28847 | 0.844223 | 8.64E-59 | -1.69E-46 |
MS.gene056407 | MS.gene28847 | 0.840167 | 1.02E-57 | -1.69E-46 |
MS.gene056410 | MS.gene28847 | 0.820224 | 7.68E-53 | -1.69E-46 |
MS.gene056609 | MS.gene28847 | 0.844119 | 9.21E-59 | -1.69E-46 |
MS.gene056657 | MS.gene28847 | 0.832071 | 1.17E-55 | -1.69E-46 |
MS.gene056897 | MS.gene28847 | 0.804693 | 1.91E-49 | -1.69E-46 |
MS.gene057011 | MS.gene28847 | 0.86255 | 4.68E-64 | -1.69E-46 |
MS.gene057129 | MS.gene28847 | 0.894065 | 3.50E-75 | -1.69E-46 |
MS.gene057146 | MS.gene28847 | 0.838094 | 3.53E-57 | -1.69E-46 |
MS.gene057295 | MS.gene28847 | 0.817161 | 3.81E-52 | -1.69E-46 |
MS.gene057331 | MS.gene28847 | 0.804498 | 2.10E-49 | -1.69E-46 |
MS.gene05735 | MS.gene28847 | 0.835311 | 1.81E-56 | -1.69E-46 |
MS.gene057416 | MS.gene28847 | 0.826578 | 2.51E-54 | -1.69E-46 |
MS.gene057823 | MS.gene28847 | 0.800526 | 1.38E-48 | -1.69E-46 |
MS.gene057845 | MS.gene28847 | 0.801859 | 7.38E-49 | -1.69E-46 |
MS.gene057926 | MS.gene28847 | 0.830044 | 3.66E-55 | -1.69E-46 |
MS.gene057927 | MS.gene28847 | 0.803442 | 3.48E-49 | -1.69E-46 |
MS.gene058006 | MS.gene28847 | 0.821946 | 3.08E-53 | -1.69E-46 |
MS.gene058019 | MS.gene28847 | 0.832523 | 9.01E-56 | -1.69E-46 |
MS.gene058082 | MS.gene28847 | 0.808406 | 3.15E-50 | -1.69E-46 |
MS.gene058233 | MS.gene28847 | 0.815416 | 9.35E-52 | -1.69E-46 |
MS.gene058293 | MS.gene28847 | 0.88993 | 1.56E-73 | -1.69E-46 |
MS.gene058323 | MS.gene28847 | 0.831019 | 2.12E-55 | -1.69E-46 |
MS.gene058365 | MS.gene28847 | 0.830241 | 3.28E-55 | -1.69E-46 |
MS.gene058419 | MS.gene28847 | 0.827929 | 1.19E-54 | -1.69E-46 |
MS.gene058660 | MS.gene28847 | 0.848133 | 7.44E-60 | -1.69E-46 |
MS.gene058723 | MS.gene28847 | 0.812725 | 3.67E-51 | -1.69E-46 |
MS.gene058748 | MS.gene28847 | 0.800436 | 1.44E-48 | -1.69E-46 |
MS.gene058787 | MS.gene28847 | 0.814913 | 1.21E-51 | -1.69E-46 |
MS.gene059029 | MS.gene28847 | 0.822131 | 2.79E-53 | -1.69E-46 |
MS.gene05934 | MS.gene28847 | 0.824682 | 7.07E-54 | -1.69E-46 |
MS.gene059536 | MS.gene28847 | 0.829558 | 4.81E-55 | -1.69E-46 |
MS.gene059597 | MS.gene28847 | 0.825852 | 3.74E-54 | -1.69E-46 |
MS.gene059676 | MS.gene28847 | 0.837679 | 4.51E-57 | -1.69E-46 |
MS.gene059688 | MS.gene28847 | 0.849454 | 3.20E-60 | -1.69E-46 |
MS.gene059692 | MS.gene28847 | 0.863432 | 2.50E-64 | -1.69E-46 |
MS.gene059695 | MS.gene28847 | 0.868139 | 8.15E-66 | -1.69E-46 |
MS.gene059708 | MS.gene28847 | 0.806412 | 8.33E-50 | -1.69E-46 |
MS.gene059711 | MS.gene28847 | 0.817214 | 3.70E-52 | -1.69E-46 |
MS.gene059718 | MS.gene28847 | 0.818749 | 1.67E-52 | -1.69E-46 |
MS.gene059902 | MS.gene28847 | 0.806536 | 7.84E-50 | -1.69E-46 |
MS.gene059960 | MS.gene28847 | 0.879145 | 1.58E-69 | -1.69E-46 |
MS.gene060193 | MS.gene28847 | 0.831726 | 1.42E-55 | -1.69E-46 |
MS.gene06037 | MS.gene28847 | 0.811654 | 6.29E-51 | -1.69E-46 |
MS.gene060804 | MS.gene28847 | 0.876475 | 1.36E-68 | -1.69E-46 |
MS.gene060818 | MS.gene28847 | 0.835799 | 1.36E-56 | -1.69E-46 |
MS.gene060835 | MS.gene28847 | 0.80735 | 5.28E-50 | -1.69E-46 |
MS.gene060837 | MS.gene28847 | 0.825509 | 4.51E-54 | -1.69E-46 |
MS.gene06092 | MS.gene28847 | 0.836055 | 1.17E-56 | -1.69E-46 |
MS.gene061041 | MS.gene28847 | 0.861984 | 6.98E-64 | -1.69E-46 |
MS.gene061049 | MS.gene28847 | 0.804725 | 1.88E-49 | -1.69E-46 |
MS.gene061051 | MS.gene28847 | -0.846729 | 1.81E-59 | -1.69E-46 |
MS.gene061150 | MS.gene28847 | 0.807453 | 5.02E-50 | -1.69E-46 |
MS.gene061200 | MS.gene28847 | 0.878003 | 3.99E-69 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28847.t1 | MTR_7g110130 | 93.985 | 266 | 15 | 1 | 1 | 265 | 1 | 266 | 0.0 | 499 |
MS.gene28847.t1 | MTR_2g090165 | 81.509 | 265 | 48 | 1 | 1 | 265 | 1 | 264 | 1.57e-158 | 441 |
MS.gene28847.t1 | MTR_7g110160 | 79.767 | 257 | 33 | 1 | 1 | 257 | 1 | 238 | 8.84e-144 | 403 |
MS.gene28847.t1 | MTR_7g110140 | 68.797 | 266 | 79 | 2 | 1 | 263 | 1 | 265 | 2.30e-129 | 367 |
MS.gene28847.t1 | MTR_6g035395 | 60.920 | 261 | 88 | 2 | 3 | 263 | 2 | 248 | 2.52e-107 | 311 |
MS.gene28847.t1 | MTR_6g023590 | 49.801 | 251 | 125 | 1 | 5 | 254 | 12 | 262 | 5.09e-84 | 252 |
MS.gene28847.t1 | MTR_6g023950 | 50.996 | 251 | 122 | 1 | 5 | 254 | 12 | 262 | 3.09e-82 | 248 |
MS.gene28847.t1 | MTR_6g023610 | 50.000 | 250 | 124 | 1 | 5 | 253 | 12 | 261 | 7.88e-80 | 242 |
MS.gene28847.t1 | MTR_4g052340 | 49.804 | 255 | 124 | 2 | 4 | 258 | 12 | 262 | 3.00e-79 | 240 |
MS.gene28847.t1 | MTR_7g105460 | 50.198 | 253 | 125 | 1 | 5 | 257 | 12 | 263 | 1.43e-78 | 239 |
MS.gene28847.t1 | MTR_4g052320 | 49.042 | 261 | 128 | 3 | 2 | 260 | 4 | 261 | 3.06e-78 | 238 |
MS.gene28847.t1 | MTR_6g023600 | 48.606 | 251 | 128 | 1 | 5 | 254 | 12 | 262 | 5.00e-78 | 237 |
MS.gene28847.t1 | MTR_6g023990 | 47.490 | 259 | 131 | 2 | 1 | 254 | 5 | 263 | 8.61e-78 | 236 |
MS.gene28847.t1 | MTR_4g052350 | 49.804 | 255 | 124 | 2 | 4 | 258 | 12 | 262 | 1.65e-77 | 236 |
MS.gene28847.t1 | MTR_6g023910 | 48.617 | 253 | 129 | 1 | 2 | 253 | 9 | 261 | 2.24e-77 | 236 |
MS.gene28847.t1 | MTR_7g071680 | 47.482 | 278 | 125 | 4 | 2 | 260 | 25 | 300 | 5.16e-76 | 233 |
MS.gene28847.t1 | MTR_4g052300 | 48.659 | 261 | 128 | 3 | 2 | 260 | 4 | 260 | 1.72e-75 | 231 |
MS.gene28847.t1 | MTR_6g023600 | 48.207 | 251 | 123 | 2 | 5 | 254 | 12 | 256 | 2.87e-74 | 227 |
MS.gene28847.t1 | MTR_7g083870 | 46.617 | 266 | 133 | 6 | 4 | 262 | 33 | 296 | 4.21e-70 | 218 |
MS.gene28847.t1 | MTR_7g107670 | 44.141 | 256 | 136 | 3 | 4 | 254 | 31 | 284 | 4.43e-70 | 218 |
MS.gene28847.t1 | MTR_7g105580 | 44.656 | 262 | 125 | 3 | 4 | 264 | 6 | 248 | 3.36e-67 | 209 |
MS.gene28847.t1 | MTR_4g078630 | 43.956 | 273 | 141 | 4 | 1 | 265 | 14 | 282 | 1.57e-66 | 208 |
MS.gene28847.t1 | MTR_3g020670 | 46.269 | 268 | 136 | 3 | 4 | 264 | 14 | 280 | 2.83e-66 | 207 |
MS.gene28847.t1 | MTR_7g105590 | 49.735 | 189 | 94 | 1 | 4 | 192 | 6 | 193 | 5.21e-57 | 181 |
MS.gene28847.t1 | MTR_7g105570 | 39.464 | 261 | 102 | 4 | 2 | 258 | 13 | 221 | 1.53e-49 | 163 |
MS.gene28847.t1 | MTR_3g113870 | 45.055 | 182 | 98 | 2 | 14 | 195 | 29 | 208 | 7.15e-48 | 159 |
MS.gene28847.t1 | MTR_4g084800 | 49.640 | 139 | 70 | 0 | 4 | 142 | 11 | 149 | 5.14e-41 | 139 |
MS.gene28847.t1 | MTR_4g058840 | 30.855 | 269 | 146 | 8 | 6 | 252 | 11 | 261 | 3.40e-24 | 98.6 |
MS.gene28847.t1 | MTR_4g058820 | 30.855 | 269 | 146 | 8 | 6 | 252 | 11 | 261 | 3.40e-24 | 98.6 |
MS.gene28847.t1 | MTR_6g023940 | 33.173 | 208 | 62 | 4 | 2 | 201 | 9 | 147 | 9.14e-24 | 94.4 |
MS.gene28847.t1 | MTR_4g058810 | 29.740 | 269 | 149 | 8 | 6 | 252 | 11 | 261 | 2.71e-20 | 87.8 |
MS.gene28847.t1 | MTR_7g113650 | 27.925 | 265 | 170 | 8 | 5 | 258 | 39 | 293 | 5.04e-20 | 87.4 |
MS.gene28847.t1 | MTR_3g085740 | 26.616 | 263 | 163 | 10 | 4 | 253 | 73 | 318 | 1.69e-19 | 86.7 |
MS.gene28847.t1 | MTR_1g051165 | 28.253 | 269 | 168 | 7 | 4 | 255 | 12 | 272 | 1.93e-19 | 85.9 |
MS.gene28847.t1 | MTR_4g131740 | 28.185 | 259 | 167 | 8 | 5 | 252 | 39 | 289 | 9.66e-19 | 84.0 |
MS.gene28847.t1 | MTR_4g132850 | 29.528 | 254 | 167 | 6 | 4 | 254 | 5 | 249 | 1.87e-18 | 82.4 |
MS.gene28847.t1 | MTR_1g082760 | 28.253 | 269 | 162 | 9 | 5 | 257 | 39 | 292 | 2.65e-18 | 82.8 |
MS.gene28847.t1 | MTR_1196s0010 | 30.040 | 253 | 163 | 7 | 4 | 253 | 272 | 513 | 5.29e-18 | 83.6 |
MS.gene28847.t1 | MTR_7g105560 | 64.286 | 56 | 20 | 0 | 4 | 59 | 11 | 66 | 4.65e-16 | 73.6 |
MS.gene28847.t1 | MTR_3g068070 | 28.462 | 260 | 171 | 9 | 2 | 255 | 11 | 261 | 3.87e-15 | 73.6 |
MS.gene28847.t1 | MTR_4g064887 | 26.923 | 260 | 175 | 8 | 2 | 255 | 11 | 261 | 4.74e-15 | 73.2 |
MS.gene28847.t1 | MTR_3g068175 | 28.625 | 269 | 178 | 8 | 1 | 264 | 12 | 271 | 1.18e-13 | 69.3 |
MS.gene28847.t1 | MTR_3g068065 | 26.772 | 254 | 173 | 7 | 6 | 254 | 17 | 262 | 2.86e-13 | 68.6 |
MS.gene28847.t1 | MTR_3g068155 | 27.907 | 258 | 175 | 8 | 3 | 256 | 16 | 266 | 2.89e-13 | 68.6 |
MS.gene28847.t1 | MTR_7g094520 | 27.165 | 254 | 174 | 5 | 6 | 253 | 11 | 259 | 3.01e-13 | 68.2 |
MS.gene28847.t1 | MTR_3g068085 | 26.236 | 263 | 182 | 7 | 6 | 264 | 15 | 269 | 6.17e-13 | 67.4 |
MS.gene28847.t1 | MTR_8g442750 | 27.132 | 258 | 172 | 8 | 6 | 253 | 14 | 265 | 1.40e-12 | 66.6 |
MS.gene28847.t1 | MTR_4g064887 | 28.856 | 201 | 131 | 6 | 2 | 196 | 11 | 205 | 1.94e-12 | 65.5 |
MS.gene28847.t1 | MTR_4g086400 | 27.488 | 211 | 124 | 5 | 8 | 198 | 6 | 207 | 4.93e-12 | 65.9 |
MS.gene28847.t1 | MTR_4g097510 | 26.842 | 190 | 134 | 4 | 7 | 195 | 3 | 188 | 5.46e-12 | 64.7 |
MS.gene28847.t1 | MTR_7g094510 | 26.236 | 263 | 175 | 7 | 1 | 253 | 1 | 254 | 8.29e-12 | 63.9 |
MS.gene28847.t1 | MTR_4g086410 | 28.910 | 211 | 121 | 5 | 8 | 198 | 6 | 207 | 1.06e-11 | 65.1 |
MS.gene28847.t1 | MTR_7g076660 | 39.560 | 91 | 51 | 2 | 9 | 95 | 8 | 98 | 4.60e-11 | 62.4 |
MS.gene28847.t1 | MTR_7g076660 | 38.462 | 91 | 52 | 2 | 9 | 95 | 7 | 97 | 9.50e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28847.t1 | AT2G47140 | 62.891 | 256 | 94 | 1 | 1 | 256 | 1 | 255 | 6.14e-114 | 328 |
MS.gene28847.t1 | AT3G29250 | 57.588 | 257 | 108 | 1 | 1 | 257 | 1 | 256 | 1.39e-100 | 294 |
MS.gene28847.t1 | AT3G29250 | 57.588 | 257 | 108 | 1 | 1 | 257 | 37 | 292 | 2.93e-100 | 295 |
MS.gene28847.t1 | AT2G47130 | 56.977 | 258 | 109 | 2 | 1 | 258 | 1 | 256 | 3.16e-100 | 293 |
MS.gene28847.t1 | AT3G29250 | 57.255 | 255 | 108 | 1 | 3 | 257 | 41 | 294 | 1.94e-99 | 293 |
MS.gene28847.t1 | AT3G29260 | 57.364 | 258 | 106 | 3 | 1 | 257 | 1 | 255 | 2.58e-97 | 286 |
MS.gene28847.t1 | AT2G47120 | 55.385 | 260 | 109 | 4 | 1 | 258 | 1 | 255 | 3.91e-97 | 285 |
MS.gene28847.t1 | AT2G47120 | 55.336 | 253 | 110 | 3 | 5 | 257 | 6 | 255 | 2.17e-96 | 283 |
MS.gene28847.t1 | AT3G51680 | 48.897 | 272 | 124 | 3 | 4 | 260 | 30 | 301 | 7.22e-74 | 228 |
MS.gene28847.t1 | AT1G52340 | 45.455 | 264 | 133 | 3 | 4 | 257 | 16 | 278 | 2.55e-67 | 210 |
MS.gene28847.t1 | AT3G26760 | 41.132 | 265 | 146 | 4 | 2 | 258 | 32 | 294 | 2.22e-65 | 206 |
MS.gene28847.t1 | AT4G03140 | 42.692 | 260 | 142 | 3 | 4 | 258 | 76 | 333 | 7.25e-65 | 206 |
MS.gene28847.t1 | AT3G26770 | 43.939 | 264 | 132 | 6 | 4 | 257 | 39 | 296 | 9.28e-63 | 199 |
MS.gene28847.t1 | AT3G42960 | 45.620 | 274 | 130 | 7 | 2 | 263 | 4 | 270 | 7.24e-58 | 186 |
MS.gene28847.t1 | AT2G47150 | 33.824 | 272 | 86 | 6 | 6 | 257 | 1 | 198 | 2.56e-36 | 128 |
MS.gene28847.t1 | AT3G55290 | 29.231 | 260 | 162 | 8 | 6 | 252 | 17 | 267 | 3.17e-20 | 87.8 |
MS.gene28847.t1 | AT3G55290 | 29.231 | 260 | 162 | 8 | 6 | 252 | 18 | 268 | 3.53e-20 | 87.8 |
MS.gene28847.t1 | AT1G07450 | 29.845 | 258 | 171 | 7 | 1 | 255 | 3 | 253 | 7.72e-20 | 86.7 |
MS.gene28847.t1 | AT2G29310 | 28.682 | 258 | 171 | 7 | 3 | 255 | 4 | 253 | 8.14e-20 | 86.7 |
MS.gene28847.t1 | AT1G62610 | 29.231 | 260 | 163 | 6 | 6 | 252 | 15 | 266 | 9.07e-20 | 86.7 |
MS.gene28847.t1 | AT1G62610 | 29.231 | 260 | 163 | 6 | 6 | 252 | 14 | 265 | 9.21e-20 | 86.7 |
MS.gene28847.t1 | AT1G62610 | 29.231 | 260 | 163 | 6 | 6 | 252 | 13 | 264 | 9.94e-20 | 86.7 |
MS.gene28847.t1 | AT1G62610 | 29.231 | 260 | 163 | 6 | 6 | 252 | 19 | 270 | 1.11e-19 | 86.7 |
MS.gene28847.t1 | AT2G29340 | 28.846 | 260 | 168 | 7 | 3 | 255 | 4 | 253 | 4.31e-19 | 84.3 |
MS.gene28847.t1 | AT2G29340 | 28.462 | 260 | 169 | 7 | 3 | 255 | 4 | 253 | 5.68e-19 | 85.1 |
MS.gene28847.t1 | AT1G63380 | 29.104 | 268 | 159 | 9 | 6 | 255 | 17 | 271 | 3.24e-18 | 82.4 |
MS.gene28847.t1 | AT1G63380 | 29.104 | 268 | 159 | 9 | 6 | 255 | 15 | 269 | 3.46e-18 | 82.4 |
MS.gene28847.t1 | AT1G63380 | 29.104 | 268 | 159 | 9 | 6 | 255 | 19 | 273 | 3.47e-18 | 82.4 |
MS.gene28847.t1 | AT3G55310 | 28.846 | 260 | 163 | 8 | 6 | 252 | 17 | 267 | 4.47e-18 | 82.0 |
MS.gene28847.t1 | AT2G29150 | 30.534 | 262 | 162 | 9 | 2 | 255 | 12 | 261 | 4.54e-18 | 81.6 |
MS.gene28847.t1 | AT1G63380 | 29.119 | 261 | 162 | 8 | 6 | 252 | 22 | 273 | 4.59e-18 | 82.0 |
MS.gene28847.t1 | AT2G29360 | 28.839 | 267 | 159 | 9 | 3 | 255 | 13 | 262 | 1.38e-17 | 80.5 |
MS.gene28847.t1 | AT2G29290 | 29.963 | 267 | 156 | 7 | 3 | 255 | 4 | 253 | 1.51e-17 | 80.1 |
MS.gene28847.t1 | AT2G17845 | 27.985 | 268 | 166 | 8 | 6 | 256 | 47 | 304 | 3.40e-17 | 80.1 |
MS.gene28847.t1 | AT3G46170 | 27.907 | 258 | 168 | 7 | 6 | 252 | 26 | 276 | 1.26e-16 | 78.2 |
MS.gene28847.t1 | AT1G24360 | 25.969 | 258 | 175 | 8 | 4 | 255 | 72 | 319 | 1.81e-16 | 78.2 |
MS.gene28847.t1 | AT2G29350 | 28.358 | 268 | 160 | 10 | 2 | 255 | 11 | 260 | 2.44e-15 | 74.3 |
MS.gene28847.t1 | AT2G30670 | 27.132 | 258 | 175 | 6 | 3 | 255 | 4 | 253 | 2.60e-15 | 73.9 |
MS.gene28847.t1 | AT2G29340 | 28.641 | 206 | 133 | 5 | 3 | 201 | 4 | 202 | 2.91e-15 | 72.8 |
MS.gene28847.t1 | AT2G29340 | 28.641 | 206 | 133 | 5 | 3 | 201 | 4 | 202 | 2.91e-15 | 72.8 |
MS.gene28847.t1 | AT1G54870 | 26.415 | 265 | 174 | 8 | 5 | 258 | 83 | 337 | 6.02e-15 | 73.9 |
MS.gene28847.t1 | AT1G54870 | 26.415 | 265 | 174 | 8 | 5 | 258 | 81 | 335 | 6.67e-15 | 73.9 |
MS.gene28847.t1 | AT5G06060 | 30.038 | 263 | 161 | 9 | 3 | 255 | 6 | 255 | 1.19e-14 | 72.4 |
MS.gene28847.t1 | AT1G07440 | 27.715 | 267 | 161 | 9 | 3 | 255 | 9 | 257 | 1.24e-14 | 72.4 |
MS.gene28847.t1 | AT4G05530 | 31.395 | 258 | 157 | 9 | 4 | 254 | 7 | 251 | 3.03e-14 | 70.9 |
MS.gene28847.t1 | AT2G29300 | 27.969 | 261 | 170 | 10 | 3 | 255 | 4 | 254 | 3.80e-14 | 70.9 |
MS.gene28847.t1 | AT2G29300 | 27.068 | 266 | 176 | 10 | 3 | 260 | 4 | 259 | 3.80e-14 | 71.2 |
MS.gene28847.t1 | AT2G29290 | 29.954 | 217 | 132 | 6 | 42 | 255 | 37 | 236 | 7.77e-14 | 69.7 |
MS.gene28847.t1 | AT1G49670 | 29.524 | 210 | 119 | 5 | 7 | 196 | 5 | 205 | 8.08e-14 | 71.2 |
MS.gene28847.t1 | AT3G05260 | 26.336 | 262 | 172 | 8 | 5 | 255 | 36 | 287 | 9.04e-14 | 70.1 |
MS.gene28847.t1 | AT1G49670 | 29.524 | 210 | 119 | 5 | 7 | 196 | 5 | 205 | 9.24e-14 | 71.2 |
MS.gene28847.t1 | AT5G18210 | 28.244 | 262 | 164 | 5 | 6 | 253 | 8 | 259 | 1.25e-12 | 66.6 |
MS.gene28847.t1 | AT4G13180 | 28.030 | 264 | 163 | 6 | 6 | 255 | 13 | 263 | 2.72e-12 | 65.5 |
MS.gene28847.t1 | AT2G29350 | 29.187 | 209 | 120 | 8 | 2 | 196 | 11 | 205 | 5.38e-11 | 61.2 |
Find 55 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGAAAGGAATTACATTAA+AGG | 0.203968 | 7.4:-5446105 | MS.gene28847:CDS |
GACTGATCCACGAACATTAA+TGG | 0.261085 | 7.4:+5446412 | None:intergenic |
AGCAGATATCAATGATGAAT+TGG | 0.283540 | 7.4:-5446642 | MS.gene28847:CDS |
AATCATCAATGTCGAGAAAA+AGG | 0.290314 | 7.4:-5447003 | None:intergenic |
AGTGTAGCTGCTTCTGTTGC+TGG | 0.306606 | 7.4:-5446320 | MS.gene28847:CDS |
GTGAAGACATTCATGGAAAA+TGG | 0.307538 | 7.4:-5446680 | MS.gene28847:CDS |
ACATCCAAACATGGTCTCTT+AGG | 0.311178 | 7.4:-5446275 | MS.gene28847:CDS |
TTATATTAGTGGACACAATT+TGG | 0.312298 | 7.4:-5446033 | MS.gene28847:CDS |
CACCAAGTTGCTACAACAAT+TGG | 0.313612 | 7.4:-5446617 | MS.gene28847:CDS |
TACACTGGCAGTACAAATTA+TGG | 0.348031 | 7.4:+5446337 | None:intergenic |
GTTGCTAAACATAATGTCTA+AGG | 0.368211 | 7.4:+5446505 | None:intergenic |
GCTGCTTCTGTTGCTGGAAC+TGG | 0.384524 | 7.4:-5446314 | MS.gene28847:CDS |
TTATCATAGGTTGGAGGGTA+AGG | 0.422520 | 7.4:-5446747 | MS.gene28847:intron |
GAAGAATCAGCTTATATTAG+TGG | 0.431042 | 7.4:-5446044 | MS.gene28847:CDS |
TGCGGTGAGCTTGGAGCTTA+CGG | 0.431271 | 7.4:-5446236 | MS.gene28847:CDS |
CGTTCAACGTGCGGTGAGCT+TGG | 0.449623 | 7.4:-5446245 | MS.gene28847:CDS |
CGAGACAGTGAAGACATTCA+TGG | 0.459149 | 7.4:-5446687 | MS.gene28847:CDS |
GCAGATATCAATGATGAATT+GGG | 0.463215 | 7.4:-5446641 | MS.gene28847:CDS |
AAGTCCTAAGAGACCATGTT+TGG | 0.467093 | 7.4:+5446271 | None:intergenic |
ACCCAATTGTTGTAGCAACT+TGG | 0.467514 | 7.4:+5446615 | None:intergenic |
TTTAGCAACGCTGGAATTGA+AGG | 0.468853 | 7.4:-5446491 | MS.gene28847:CDS |
AATGATTCTGCTAATTTGAA+AGG | 0.470724 | 7.4:-5446119 | MS.gene28847:CDS |
AGCTGCTCTCTTTCTTGCAT+CGG | 0.473087 | 7.4:-5446066 | MS.gene28847:CDS |
ACCAAGTTGCTACAACAATT+GGG | 0.482213 | 7.4:-5446616 | MS.gene28847:CDS |
CAAGCACGCTGCACGTATCA+TGG | 0.486933 | 7.4:-5446381 | MS.gene28847:CDS |
CATGAATGTCTTCACTGTCT+CGG | 0.489073 | 7.4:+5446688 | None:intergenic |
GACATTATGTTTAGCAACGC+TGG | 0.491704 | 7.4:-5446500 | MS.gene28847:CDS |
GGTAAGGTTGCTATAGTGAC+TGG | 0.496701 | 7.4:-5446731 | MS.gene28847:CDS |
AACATGGCCATTAATGTTCG+TGG | 0.507255 | 7.4:-5446419 | MS.gene28847:CDS |
CACAATTTGGTGGTCGATGG+AGG | 0.510608 | 7.4:-5446020 | MS.gene28847:CDS |
GTGAGTGAAGTTGAAGCTAT+GGG | 0.510902 | 7.4:-5446143 | MS.gene28847:CDS |
AGAGGCGTGGCAACAGCATA+CGG | 0.535077 | 7.4:+5446191 | None:intergenic |
AGCAACAGAAGCAGCTACAC+TGG | 0.548413 | 7.4:+5446322 | None:intergenic |
GCTTCTGTTGCTGGAACTGG+TGG | 0.550638 | 7.4:-5446311 | MS.gene28847:CDS |
AGTTGCTACAACAATTGGGT+TGG | 0.551015 | 7.4:-5446612 | MS.gene28847:CDS |
GGTGAGTGAAGTTGAAGCTA+TGG | 0.560707 | 7.4:-5446144 | MS.gene28847:CDS |
TATTAGTGGACACAATTTGG+TGG | 0.561555 | 7.4:-5446030 | MS.gene28847:CDS |
GGACACAATTTGGTGGTCGA+TGG | 0.563116 | 7.4:-5446023 | MS.gene28847:CDS |
GGAAACAGTAGCTTTCGCAT+TGG | 0.572052 | 7.4:-5446540 | MS.gene28847:CDS |
TGCATGTAGAGCACTGAACA+TGG | 0.590712 | 7.4:-5446168 | MS.gene28847:CDS |
GTAAGGTTGCTATAGTGACT+GGG | 0.597391 | 7.4:-5446730 | MS.gene28847:CDS |
TTCAGTGCTCTACATGCAAG+AGG | 0.603585 | 7.4:+5446173 | None:intergenic |
GATTATGTCACATCCAAACA+TGG | 0.609752 | 7.4:-5446284 | MS.gene28847:CDS |
TGCTCTACATGCAAGAGGCG+TGG | 0.617171 | 7.4:+5446178 | None:intergenic |
CATCTCTCACATCACAATGG+TGG | 0.624448 | 7.4:+5446576 | None:intergenic |
TTTCATCTCTCACATCACAA+TGG | 0.636508 | 7.4:+5446573 | None:intergenic |
AGCAACGCTGGAATTGAAGG+TGG | 0.637971 | 7.4:-5446488 | MS.gene28847:CDS |
GGACTTGTACGTTCAACGTG+CGG | 0.641327 | 7.4:-5446254 | MS.gene28847:CDS |
CAGTACAAATTATGGATCCG+CGG | 0.653793 | 7.4:+5446345 | None:intergenic |
TGAGTGAAGTTGAAGCTATG+GGG | 0.654036 | 7.4:-5446142 | MS.gene28847:CDS |
GAATGAATTTGACAACAACA+TGG | 0.663292 | 7.4:-5446435 | MS.gene28847:CDS |
TAAGGTTGCTATAGTGACTG+GGG | 0.680742 | 7.4:-5446729 | MS.gene28847:CDS |
GCACGCTGCACGTATCATGG+TGG | 0.695569 | 7.4:-5446378 | MS.gene28847:CDS |
AAGGTTGCTATAGTGACTGG+GGG | 0.716926 | 7.4:-5446728 | MS.gene28847:CDS |
ATGTAGAGCACTGAACATGG+AGG | 0.811309 | 7.4:-5446165 | MS.gene28847:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTTTAAAAAAAAAAAAAAGA+TGG | + | chr7.4:5446030-5446049 | None:intergenic | 10.0% |
!!! | ATCTTAATTAATTTTATCAT+AGG | - | chr7.4:5446212-5446231 | MS.gene28847:CDS | 10.0% |
!!! | TAATTAATTTTATCATAGGT+TGG | - | chr7.4:5446216-5446235 | MS.gene28847:CDS | 15.0% |
!! | TTATTAGGATATATTCATGT+GGG | + | chr7.4:5446132-5446151 | None:intergenic | 20.0% |
!! | TTTGAAAGGAATTACATTAA+AGG | - | chr7.4:5446867-5446886 | MS.gene28847:intron | 20.0% |
!!! | GATTTAACCTTTTTGAAAAT+TGG | - | chr7.4:5446086-5446105 | MS.gene28847:CDS | 20.0% |
! | AATGATTCTGCTAATTTGAA+AGG | - | chr7.4:5446853-5446872 | MS.gene28847:intron | 25.0% |
! | CAAAATTTCACCTAATAAGA+TGG | + | chr7.4:5446064-5446083 | None:intergenic | 25.0% |
! | CATGTAGTAATGTTCTTATT+AGG | + | chr7.4:5446147-5446166 | None:intergenic | 25.0% |
! | CTTATTAGGATATATTCATG+TGG | + | chr7.4:5446133-5446152 | None:intergenic | 25.0% |
! | TGTATTCATGCAACATAAAT+AGG | + | chr7.4:5446182-5446201 | None:intergenic | 25.0% |
!! | TTATATTAGTGGACACAATT+TGG | - | chr7.4:5446939-5446958 | MS.gene28847:intron | 25.0% |
!!! | TAATTTTATCATAGGTTGGA+GGG | - | chr7.4:5446220-5446239 | MS.gene28847:CDS | 25.0% |
!!! | TTAATTTTATCATAGGTTGG+AGG | - | chr7.4:5446219-5446238 | MS.gene28847:CDS | 25.0% |
AGCAGATATCAATGATGAAT+TGG | - | chr7.4:5446330-5446349 | MS.gene28847:CDS | 30.0% | |
GAAGAATCAGCTTATATTAG+TGG | - | chr7.4:5446928-5446947 | MS.gene28847:intron | 30.0% | |
GAATGAATTTGACAACAACA+TGG | - | chr7.4:5446537-5446556 | MS.gene28847:CDS | 30.0% | |
GCAGATATCAATGATGAATT+GGG | - | chr7.4:5446331-5446350 | MS.gene28847:CDS | 30.0% | |
GTTGCTAAACATAATGTCTA+AGG | + | chr7.4:5446470-5446489 | None:intergenic | 30.0% | |
ACCAAGTTGCTACAACAATT+GGG | - | chr7.4:5446356-5446375 | MS.gene28847:CDS | 35.0% | |
GAGAGATGAAAAACAAGTTG+AGG | - | chr7.4:5446411-5446430 | MS.gene28847:CDS | 35.0% | |
GATTATGTCACATCCAAACA+TGG | - | chr7.4:5446688-5446707 | MS.gene28847:CDS | 35.0% | |
GCTTTCGCATTGGAAAAATA+TGG | - | chr7.4:5446442-5446461 | MS.gene28847:CDS | 35.0% | |
GGGTTTCACATTATTATGTG+AGG | + | chr7.4:5446112-5446131 | None:intergenic | 35.0% | |
GTAACACTCACCATCTTATT+AGG | - | chr7.4:5446051-5446070 | MS.gene28847:CDS | 35.0% | |
GTGAAGACATTCATGGAAAA+TGG | - | chr7.4:5446292-5446311 | MS.gene28847:CDS | 35.0% | |
TACACTGGCAGTACAAATTA+TGG | + | chr7.4:5446638-5446657 | None:intergenic | 35.0% | |
TTTCATCTCTCACATCACAA+TGG | + | chr7.4:5446402-5446421 | None:intergenic | 35.0% | |
! | TATTAGTGGACACAATTTGG+TGG | - | chr7.4:5446942-5446961 | MS.gene28847:intron | 35.0% |
! | TGTGAGGCCAATTTTCAAAA+AGG | + | chr7.4:5446096-5446115 | None:intergenic | 35.0% |
AACATGGCCATTAATGTTCG+TGG | - | chr7.4:5446553-5446572 | MS.gene28847:CDS | 40.0% | |
AAGTCCTAAGAGACCATGTT+TGG | + | chr7.4:5446704-5446723 | None:intergenic | 40.0% | |
ACATCCAAACATGGTCTCTT+AGG | - | chr7.4:5446697-5446716 | MS.gene28847:CDS | 40.0% | |
ACCCAATTGTTGTAGCAACT+TGG | + | chr7.4:5446360-5446379 | None:intergenic | 40.0% | |
AGTTGCTACAACAATTGGGT+TGG | - | chr7.4:5446360-5446379 | MS.gene28847:CDS | 40.0% | |
CACCAAGTTGCTACAACAAT+TGG | - | chr7.4:5446355-5446374 | MS.gene28847:CDS | 40.0% | |
CAGTACAAATTATGGATCCG+CGG | + | chr7.4:5446630-5446649 | None:intergenic | 40.0% | |
CATGAATGTCTTCACTGTCT+CGG | + | chr7.4:5446287-5446306 | None:intergenic | 40.0% | |
GACATTATGTTTAGCAACGC+TGG | - | chr7.4:5446472-5446491 | MS.gene28847:CDS | 40.0% | |
GACTGATCCACGAACATTAA+TGG | + | chr7.4:5446563-5446582 | None:intergenic | 40.0% | |
GTAAGGTTGCTATAGTGACT+GGG | - | chr7.4:5446242-5446261 | MS.gene28847:CDS | 40.0% | |
GTGAGTGAAGTTGAAGCTAT+GGG | - | chr7.4:5446829-5446848 | MS.gene28847:intron | 40.0% | |
TAAGGTTGCTATAGTGACTG+GGG | - | chr7.4:5446243-5446262 | MS.gene28847:CDS | 40.0% | |
TGAGTGAAGTTGAAGCTATG+GGG | - | chr7.4:5446830-5446849 | MS.gene28847:intron | 40.0% | |
TTTAGCAACGCTGGAATTGA+AGG | - | chr7.4:5446481-5446500 | MS.gene28847:CDS | 40.0% | |
! | TTATCATAGGTTGGAGGGTA+AGG | - | chr7.4:5446225-5446244 | MS.gene28847:CDS | 40.0% |
AAGGTTGCTATAGTGACTGG+GGG | - | chr7.4:5446244-5446263 | MS.gene28847:CDS | 45.0% | |
AGCTGCTCTCTTTCTTGCAT+CGG | - | chr7.4:5446906-5446925 | MS.gene28847:intron | 45.0% | |
CATCTCTCACATCACAATGG+TGG | + | chr7.4:5446399-5446418 | None:intergenic | 45.0% | |
CGAGACAGTGAAGACATTCA+TGG | - | chr7.4:5446285-5446304 | MS.gene28847:CDS | 45.0% | |
GGAAACAGTAGCTTTCGCAT+TGG | - | chr7.4:5446432-5446451 | MS.gene28847:CDS | 45.0% | |
GGTAAGGTTGCTATAGTGAC+TGG | - | chr7.4:5446241-5446260 | MS.gene28847:CDS | 45.0% | |
GGTGAGTGAAGTTGAAGCTA+TGG | - | chr7.4:5446828-5446847 | MS.gene28847:intron | 45.0% | |
TTCAGTGCTCTACATGCAAG+AGG | + | chr7.4:5446802-5446821 | None:intergenic | 45.0% | |
! | ATGGTGGAGAGAAAAATCCG+CGG | - | chr7.4:5446610-5446629 | MS.gene28847:CDS | 45.0% |
!! | ATGTAGAGCACTGAACATGG+AGG | - | chr7.4:5446807-5446826 | MS.gene28847:intron | 45.0% |
!! | TGCATGTAGAGCACTGAACA+TGG | - | chr7.4:5446804-5446823 | MS.gene28847:intron | 45.0% |
!!! | ATCTTTTTTTTTTTTTTAAA+CGG | - | chr7.4:5446029-5446048 | MS.gene28847:CDS | 5.0% |
AGATGGTGAGTGTTAGACGC+AGG | + | chr7.4:5446013-5446032 | None:intergenic | 50.0% | |
AGCAACAGAAGCAGCTACAC+TGG | + | chr7.4:5446653-5446672 | None:intergenic | 50.0% | |
AGCAACGCTGGAATTGAAGG+TGG | - | chr7.4:5446484-5446503 | MS.gene28847:CDS | 50.0% | |
AGTGTAGCTGCTTCTGTTGC+TGG | - | chr7.4:5446652-5446671 | MS.gene28847:CDS | 50.0% | |
GAGTGTTAGACGCAGGAGTA+AGG | + | chr7.4:5446006-5446025 | None:intergenic | 50.0% | |
GGACTTGTACGTTCAACGTG+CGG | - | chr7.4:5446718-5446737 | MS.gene28847:CDS | 50.0% | |
! | CACAATTTGGTGGTCGATGG+AGG | - | chr7.4:5446952-5446971 | MS.gene28847:intron | 50.0% |
! | GGACACAATTTGGTGGTCGA+TGG | - | chr7.4:5446949-5446968 | MS.gene28847:intron | 50.0% |
ATAGTGACTGGGGGAGCAAG+CGG | - | chr7.4:5446253-5446272 | MS.gene28847:CDS | 55.0% | |
CAAGCACGCTGCACGTATCA+TGG | - | chr7.4:5446591-5446610 | MS.gene28847:CDS | 55.0% | |
GCTGCTTCTGTTGCTGGAAC+TGG | - | chr7.4:5446658-5446677 | MS.gene28847:CDS | 55.0% | |
GCTTCTGTTGCTGGAACTGG+TGG | - | chr7.4:5446661-5446680 | MS.gene28847:CDS | 55.0% | |
TGCGGTGAGCTTGGAGCTTA+CGG | - | chr7.4:5446736-5446755 | MS.gene28847:CDS | 55.0% | |
TGCTCTACATGCAAGAGGCG+TGG | + | chr7.4:5446797-5446816 | None:intergenic | 55.0% | |
! | AGAGGCGTGGCAACAGCATA+CGG | + | chr7.4:5446784-5446803 | None:intergenic | 55.0% |
ACTGGGGGAGCAAGCGGAAT+AGG | - | chr7.4:5446259-5446278 | MS.gene28847:CDS | 60.0% | |
CGTTCAACGTGCGGTGAGCT+TGG | - | chr7.4:5446727-5446746 | MS.gene28847:CDS | 60.0% | |
GCACGCTGCACGTATCATGG+TGG | - | chr7.4:5446594-5446613 | MS.gene28847:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 5445977 | 5447017 | 5445977 | ID=MS.gene28847 |
chr7.4 | mRNA | 5445977 | 5447017 | 5445977 | ID=MS.gene28847.t1;Parent=MS.gene28847 |
chr7.4 | exon | 5447004 | 5447017 | 5447004 | ID=MS.gene28847.t1.exon1;Parent=MS.gene28847.t1 |
chr7.4 | CDS | 5447004 | 5447017 | 5447004 | ID=cds.MS.gene28847.t1;Parent=MS.gene28847.t1 |
chr7.4 | exon | 5445977 | 5446760 | 5445977 | ID=MS.gene28847.t1.exon2;Parent=MS.gene28847.t1 |
chr7.4 | CDS | 5445977 | 5446760 | 5445977 | ID=cds.MS.gene28847.t1;Parent=MS.gene28847.t1 |
Gene Sequence |
Protein sequence |