AlfalfaGEDB | MS.gene006999

M. sativa cultivar XinJiangDaYe / MS.gene006999

KEGG: -
GO: GO:0003674 GO:0003824 GO:0016491
PFAM: PF13561.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006999.t1	XP_013450332.1	94.6	296	16	0	30	325	1	296	2.00E-155	558.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006999.t1	F1SWA0	48.8	256	128	2	61	313	2	257	2.0e-63	244.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006999.t1	A0A072UF24	94.6	296	16	0	30	325	1	296	1.5e-155	558.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene63307	MS.gene006999	PPI
MS.gene006999	MS.gene07097	PPI
MS.gene006617	MS.gene006999	PPI
MS.gene006999	MS.gene31507	PPI
MS.gene54598	MS.gene006999	PPI
MS.gene006999	MS.gene95020	PPI
MS.gene006999	MS.gene50524	PPI
MS.gene08694	MS.gene006999	PPI
MS.gene003926	MS.gene006999	PPI
MS.gene52742	MS.gene006999	PPI
MS.gene52743	MS.gene006999	PPI
MS.gene50522	MS.gene006999	PPI
MS.gene007678	MS.gene006999	PPI
MS.gene006999	MS.gene63482	PPI
MS.gene006999	MS.gene043387	PPI
MS.gene044694	MS.gene006999	PPI
MS.gene006999	MS.gene04700	PPI
MS.gene63484	MS.gene006999	PPI
MS.gene006999	MS.gene08695	PPI
MS.gene008162	MS.gene006999	PPI
MS.gene006999	MS.gene008161	PPI
MS.gene021164	MS.gene006999	PPI
MS.gene006999	MS.gene42114	PPI
MS.gene015282	MS.gene006999	PPI
MS.gene63483	MS.gene006999	PPI
MS.gene065380	MS.gene006999	PPI
MS.gene09624	MS.gene006999	PPI
MS.gene006999	MS.gene039828	PPI
MS.gene42856	MS.gene006999	PPI
MS.gene63403	MS.gene006999	PPI
MS.gene019786	MS.gene006999	PPI
MS.gene006999	MS.gene30551	PPI
MS.gene006999	MS.gene03319	PPI
MS.gene85724	MS.gene006999	PPI
MS.gene41122	MS.gene006999	PPI
MS.gene006999	MS.gene63300	PPI
MS.gene006999	MS.gene87780	PPI
MS.gene63306	MS.gene006999	PPI
MS.gene62187	MS.gene006999	PPI
MS.gene006999	MS.gene008153	PPI
MS.gene63308	MS.gene006999	PPI
MS.gene033685	MS.gene006999	PPI
MS.gene006999	MS.gene80360	PPI
MS.gene006999	MS.gene008160	PPI
MS.gene006999	MS.gene08756	PPI
MS.gene045581	MS.gene006999	PPI
MS.gene28848	MS.gene006999	PPI
MS.gene87026	MS.gene006999	PPI
MS.gene050431	MS.gene006999	PPI
MS.gene006999	MS.gene028938	PPI
MS.gene006999	MS.gene003992	PPI
MS.gene003925	MS.gene006999	PPI
MS.gene62193	MS.gene006999	PPI
MS.gene006999	MS.gene055846	PPI
MS.gene006999	MS.gene62195	PPI
MS.gene73088	MS.gene006999	PPI
MS.gene073684	MS.gene006999	PPI
MS.gene056339	MS.gene006999	PPI
MS.gene07096	MS.gene006999	PPI
MS.gene54952	MS.gene006999	PPI
MS.gene031693	MS.gene006999	PPI
MS.gene006999	MS.gene73824	PPI
MS.gene050432	MS.gene006999	PPI
MS.gene006999	MS.gene024269	PPI
MS.gene006999	MS.gene003729	PPI
MS.gene006999	MS.gene050131	PPI
MS.gene012794	MS.gene006999	PPI
MS.gene006999	MS.gene43481	PPI
MS.gene006999	MS.gene43514	PPI
MS.gene018066	MS.gene006999	PPI
MS.gene072664	MS.gene006999	PPI
MS.gene28847	MS.gene006999	PPI
MS.gene62194	MS.gene006999	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006999.t1	MTR_7g107670	93.960	298	18	0	30	327	1	298	0.0	581
MS.gene006999.t1	MTR_3g113870	87.500	248	15	2	30	275	1	234	1.04e-154	433
MS.gene006999.t1	MTR_7g083870	55.245	286	127	1	42	326	15	300	4.79e-113	330
MS.gene006999.t1	MTR_7g071680	43.253	289	150	2	43	317	10	298	1.15e-83	255
MS.gene006999.t1	MTR_4g052350	50.579	259	119	3	60	317	12	262	7.35e-83	252
MS.gene006999.t1	MTR_4g052340	49.242	264	118	4	60	315	12	267	4.26e-79	242
MS.gene006999.t1	MTR_4g052320	48.837	258	124	3	61	317	7	257	4.98e-79	242
MS.gene006999.t1	MTR_4g052300	48.450	258	124	3	61	317	7	256	9.00e-76	234
MS.gene006999.t1	MTR_7g105460	47.638	254	127	2	61	313	12	260	1.16e-71	223
MS.gene006999.t1	MTR_7g110130	44.141	256	136	3	60	313	4	254	1.57e-71	223
MS.gene006999.t1	MTR_4g078630	44.788	259	136	5	60	314	17	272	1.68e-69	218
MS.gene006999.t1	MTR_7g105580	44.747	257	118	3	59	314	5	238	5.28e-69	216
MS.gene006999.t1	MTR_3g020670	45.914	257	136	2	60	313	14	270	5.36e-68	214
MS.gene006999.t1	MTR_2g090165	44.141	256	135	4	60	313	4	253	6.47e-68	213
MS.gene006999.t1	MTR_7g110140	43.609	266	142	6	61	324	5	264	1.16e-63	202
MS.gene006999.t1	MTR_7g105590	52.381	189	89	1	59	246	5	193	5.53e-62	196
MS.gene006999.t1	MTR_6g023590	39.623	265	152	4	55	316	6	265	9.68e-62	197
MS.gene006999.t1	MTR_7g110160	42.578	256	121	4	60	313	4	235	1.84e-61	196
MS.gene006999.t1	MTR_6g023910	39.623	265	152	4	56	317	7	266	5.61e-61	196
MS.gene006999.t1	MTR_6g035395	42.748	262	129	6	60	319	3	245	5.77e-61	195
MS.gene006999.t1	MTR_6g023990	40.154	259	147	4	61	316	13	266	1.09e-59	192
MS.gene006999.t1	MTR_6g023950	40.996	261	146	4	55	312	6	261	5.21e-59	191
MS.gene006999.t1	MTR_6g023610	38.491	265	155	4	55	316	6	265	1.87e-58	189
MS.gene006999.t1	MTR_6g023600	39.700	267	149	5	55	316	6	265	6.67e-56	182
MS.gene006999.t1	MTR_6g023600	38.951	267	145	6	55	316	6	259	6.55e-52	172
MS.gene006999.t1	MTR_7g105570	38.521	257	103	3	57	313	16	217	1.65e-49	165
MS.gene006999.t1	MTR_4g084800	50.000	136	67	1	57	191	8	143	1.79e-39	136
MS.gene006999.t1	MTR_3g085740	30.798	263	165	8	55	312	68	318	2.33e-30	117
MS.gene006999.t1	MTR_4g132850	27.692	260	169	7	60	314	5	250	5.49e-25	101
MS.gene006999.t1	MTR_1196s0010	28.571	280	173	7	41	312	253	513	7.36e-24	102
MS.gene006999.t1	MTR_7g094510	28.352	261	165	8	62	312	6	254	1.35e-22	95.1
MS.gene006999.t1	MTR_3g068155	28.090	267	176	8	55	315	10	266	3.10e-22	94.7
MS.gene006999.t1	MTR_3g068070	26.718	262	166	6	62	313	15	260	7.66e-21	90.5
MS.gene006999.t1	MTR_7g094520	26.357	258	174	5	62	312	11	259	1.79e-20	89.4
MS.gene006999.t1	MTR_3g068085	26.718	262	166	6	62	313	15	260	4.43e-20	88.6
MS.gene006999.t1	MTR_3g068065	27.237	257	173	7	62	314	17	263	7.70e-20	88.2
MS.gene006999.t1	MTR_4g131740	28.897	263	163	9	61	311	39	289	6.57e-19	85.9
MS.gene006999.t1	MTR_7g113650	26.692	266	164	8	61	311	39	288	1.13e-18	85.1
MS.gene006999.t1	MTR_4g064887	26.744	258	171	6	62	313	15	260	2.25e-18	84.0
MS.gene006999.t1	MTR_3g068175	27.692	260	166	7	62	313	17	262	2.48e-18	83.6
MS.gene006999.t1	MTR_4g097510	29.082	196	136	2	63	257	3	196	1.37e-17	81.6
MS.gene006999.t1	MTR_7g063330	28.958	259	169	6	62	314	15	264	2.69e-17	80.9
MS.gene006999.t1	MTR_8g442750	30.483	269	152	9	62	312	14	265	3.38e-17	80.9
MS.gene006999.t1	MTR_1g082760	25.758	264	169	7	61	311	39	288	4.75e-17	80.5
MS.gene006999.t1	MTR_6g023940	26.866	201	86	3	56	255	7	147	5.99e-17	77.0
MS.gene006999.t1	MTR_3g068175	27.273	264	166	8	62	313	17	266	1.49e-16	79.0
MS.gene006999.t1	MTR_7g080410	31.443	194	123	5	62	247	38	229	2.63e-16	78.6
MS.gene006999.t1	MTR_1g068955	28.358	268	153	7	62	310	14	261	2.69e-16	78.2
MS.gene006999.t1	MTR_7g080410	31.443	194	123	5	62	247	38	229	3.71e-16	77.8
MS.gene006999.t1	MTR_7g063260	28.571	259	171	6	62	314	16	266	3.83e-16	77.4
MS.gene006999.t1	MTR_4g064883	24.046	262	173	6	62	313	14	259	5.03e-16	77.0
MS.gene006999.t1	MTR_1g051165	25.926	270	174	8	60	313	12	271	1.00e-15	76.6
MS.gene006999.t1	MTR_7g063270	28.364	275	171	7	52	314	5	265	2.10e-15	75.5
MS.gene006999.t1	MTR_7g063320	28.839	267	156	8	62	312	15	263	3.32e-15	74.7
MS.gene006999.t1	MTR_7g063390	28.682	258	170	7	62	313	16	265	6.69e-15	73.9
MS.gene006999.t1	MTR_8g096580	29.064	203	130	7	62	256	45	241	6.95e-15	74.7
MS.gene006999.t1	MTR_7g063360	28.625	269	177	8	52	313	5	265	8.19e-15	73.6
MS.gene006999.t1	MTR_4g086400	26.259	278	159	12	67	325	9	259	1.40e-14	74.7
MS.gene006999.t1	MTR_4g058810	28.788	264	165	9	62	313	11	263	1.56e-14	72.8
MS.gene006999.t1	MTR_4g058840	27.969	261	171	9	62	313	11	263	3.34e-14	72.0
MS.gene006999.t1	MTR_4g058820	27.969	261	171	9	62	313	11	263	3.34e-14	72.0
MS.gene006999.t1	MTR_3g087850	28.962	183	121	4	66	245	30	206	3.73e-14	72.4
MS.gene006999.t1	MTR_4g086410	29.231	195	123	4	67	247	9	202	3.81e-13	70.5
MS.gene006999.t1	MTR_4g064887	27.363	201	136	4	55	249	8	204	4.12e-13	68.2
MS.gene006999.t1	MTR_8g044240	27.179	195	132	4	68	252	75	269	1.44e-12	67.8
MS.gene006999.t1	MTR_7g105560	59.615	52	21	0	60	111	11	62	1.60e-12	64.7
MS.gene006999.t1	MTR_4g064883	25.628	199	142	4	56	250	8	204	4.43e-12	65.1
MS.gene006999.t1	MTR_3g087860	26.627	169	116	3	79	245	29	191	6.18e-12	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene006999.t1	AT4G03140	72.659	267	73	0	60	326	76	342	2.48e-143	408
MS.gene006999.t1	AT3G26770	55.849	265	116	1	60	323	39	303	1.84e-108	318
MS.gene006999.t1	AT3G26760	52.727	275	127	2	51	322	25	299	3.04e-106	313
MS.gene006999.t1	AT3G51680	45.926	270	134	4	60	317	30	299	2.82e-76	236
MS.gene006999.t1	AT2G47130	45.802	262	131	5	58	316	2	255	3.97e-75	232
MS.gene006999.t1	AT3G29250	45.455	275	140	5	46	316	24	292	8.10e-75	232
MS.gene006999.t1	AT3G29250	45.977	261	133	4	58	316	2	256	3.11e-74	229
MS.gene006999.t1	AT2G47120	44.444	261	135	6	58	316	2	254	3.40e-74	229
MS.gene006999.t1	AT2G47120	44.574	258	133	6	61	316	6	255	1.80e-73	228
MS.gene006999.t1	AT3G29250	44.765	277	141	5	46	316	24	294	5.74e-73	228
MS.gene006999.t1	AT3G29260	43.295	261	139	4	58	316	2	255	2.91e-71	222
MS.gene006999.t1	AT2G47140	41.379	261	145	5	58	316	2	256	1.06e-66	210
MS.gene006999.t1	AT1G52340	46.545	275	121	7	60	316	16	282	4.66e-66	209
MS.gene006999.t1	AT3G42960	43.462	260	139	6	60	314	6	262	5.69e-62	199
MS.gene006999.t1	AT2G47150	32.422	256	114	6	62	316	1	198	4.66e-31	116
MS.gene006999.t1	AT1G24360	29.167	288	177	10	39	312	43	317	6.04e-24	100
MS.gene006999.t1	AT5G18210	30.682	264	158	9	62	312	8	259	1.46e-23	97.8
MS.gene006999.t1	AT1G07450	28.794	257	166	6	62	313	8	252	2.19e-23	97.4
MS.gene006999.t1	AT5G06060	26.894	264	179	5	54	313	1	254	1.21e-22	95.5
MS.gene006999.t1	AT2G29310	27.734	256	171	4	62	313	7	252	1.73e-22	95.1
MS.gene006999.t1	AT2G29340	28.125	256	170	5	62	313	7	252	1.82e-22	95.1
MS.gene006999.t1	AT2G29340	28.125	256	170	5	62	313	7	252	3.14e-22	95.1
MS.gene006999.t1	AT1G63380	30.566	265	162	10	61	313	14	268	9.39e-22	93.6
MS.gene006999.t1	AT1G63380	30.566	265	162	10	61	313	18	272	9.74e-22	93.6
MS.gene006999.t1	AT1G63380	30.566	265	162	10	61	313	21	275	1.00e-21	93.6
MS.gene006999.t1	AT1G63380	30.566	265	162	10	61	313	16	270	1.07e-21	93.2
MS.gene006999.t1	AT4G05530	29.231	260	165	7	60	314	7	252	1.41e-21	92.4
MS.gene006999.t1	AT2G29360	28.214	280	171	9	57	318	3	270	4.19e-21	91.7
MS.gene006999.t1	AT1G62610	29.811	265	164	10	61	313	13	267	1.76e-20	89.7
MS.gene006999.t1	AT1G62610	29.811	265	164	10	61	313	18	272	1.83e-20	90.1
MS.gene006999.t1	AT1G62610	29.811	265	164	10	61	313	14	268	1.86e-20	89.7
MS.gene006999.t1	AT1G62610	29.811	265	164	10	61	313	12	266	2.03e-20	89.7
MS.gene006999.t1	AT2G30670	27.237	257	171	7	62	313	7	252	2.40e-20	89.4
MS.gene006999.t1	AT1G54870	27.465	284	172	9	42	311	67	330	2.44e-20	90.5
MS.gene006999.t1	AT1G54870	27.465	284	172	9	42	311	69	332	3.17e-20	90.1
MS.gene006999.t1	AT2G17845	29.323	266	162	8	61	311	46	300	6.29e-20	89.0
MS.gene006999.t1	AT3G55290	30.827	266	159	11	61	313	17	270	7.82e-20	88.2
MS.gene006999.t1	AT3G55290	30.827	266	159	11	61	313	16	269	8.42e-20	88.2
MS.gene006999.t1	AT2G29330	27.344	256	172	6	62	313	7	252	1.14e-19	87.4
MS.gene006999.t1	AT5G18210	33.668	199	116	7	62	247	8	203	2.51e-19	86.7
MS.gene006999.t1	AT3G55310	31.579	266	157	11	61	313	16	269	2.69e-19	86.7
MS.gene006999.t1	AT2G29370	28.077	260	165	8	62	313	16	261	3.15e-19	86.3
MS.gene006999.t1	AT2G29300	25.475	263	173	7	62	315	7	255	4.53e-19	86.3
MS.gene006999.t1	AT3G03980	28.195	266	166	7	62	312	14	269	6.59e-19	85.5
MS.gene006999.t1	AT2G29350	28.090	267	169	7	62	318	15	268	6.96e-19	85.1
MS.gene006999.t1	AT2G29300	25.475	263	173	7	62	315	7	255	7.87e-19	85.1
MS.gene006999.t1	AT3G46170	29.771	262	167	7	61	313	25	278	8.77e-19	85.5
MS.gene006999.t1	AT2G29150	28.077	260	160	8	62	311	16	258	9.50e-19	84.7
MS.gene006999.t1	AT2G29320	27.237	257	172	6	62	313	13	259	1.02e-18	84.7
MS.gene006999.t1	AT1G07440	26.562	256	173	6	62	313	12	256	1.53e-18	84.3
MS.gene006999.t1	AT4G13180	28.839	267	156	9	62	312	13	261	1.63e-17	81.3
MS.gene006999.t1	AT3G04000	25.660	265	173	6	62	311	14	269	1.81e-17	81.3
MS.gene006999.t1	AT1G49670	31.633	196	117	5	67	247	9	202	2.76e-17	83.2
MS.gene006999.t1	AT1G49670	31.633	196	117	5	67	247	9	202	3.40e-17	82.8
MS.gene006999.t1	AT2G29260	26.182	275	187	7	54	324	60	322	7.72e-17	80.5
MS.gene006999.t1	AT2G29290	26.562	256	174	5	62	313	7	252	1.38e-16	78.6
MS.gene006999.t1	AT3G05260	25.940	266	167	8	61	312	36	285	2.16e-16	78.6
MS.gene006999.t1	AT2G29340	28.205	195	134	3	62	252	7	199	4.08e-16	76.3
MS.gene006999.t1	AT2G29340	28.205	195	134	3	62	252	7	199	4.08e-16	76.3
MS.gene006999.t1	AT2G29310	25.652	230	157	4	88	313	31	250	9.62e-16	76.3
MS.gene006999.t1	AT2G29310	28.718	195	133	3	62	252	7	199	1.04e-15	75.1
MS.gene006999.t1	AT1G10310	29.082	196	123	4	65	252	18	205	1.41e-15	75.5
MS.gene006999.t1	AT3G12800	29.562	274	167	8	62	321	10	271	3.01e-15	75.5
MS.gene006999.t1	AT3G47350	27.778	216	146	6	50	258	29	241	1.69e-14	73.6
MS.gene006999.t1	AT2G29350	29.101	189	124	4	67	249	20	204	2.06e-14	72.0
MS.gene006999.t1	AT3G47350	27.778	216	146	6	50	258	29	241	2.14e-14	73.2
MS.gene006999.t1	AT2G29350	26.754	228	149	6	96	318	16	230	5.77e-14	70.9
MS.gene006999.t1	AT5G65205	28.436	211	140	5	63	268	7	211	1.82e-13	70.1
MS.gene006999.t1	AT5G04900	27.320	194	132	3	68	252	83	276	2.93e-13	70.1
MS.gene006999.t1	AT3G03330	27.551	196	129	4	62	247	41	233	1.26e-11	65.1
MS.gene006999.t1	AT2G29290	24.545	220	153	5	95	313	28	235	3.10e-11	63.2

Find 0 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAAGTAAATATTATCAAA+AGG	-	51709:8623-8642	MS.gene006999:intron	10.0%
!!!	TAATTTTTATTTGTCTCATA+GGG	-	51709:7966-7985	MS.gene006999:CDS	15.0%
!!!	TTTTCTATTTATCTATAAGA+TGG	-	51709:8407-8426	MS.gene006999:CDS	15.0%
!!!	CTAATTTTTATTTGTCTCAT+AGG	-	51709:7965-7984	MS.gene006999:CDS	20.0%
!!!	TATAATTTGCATATATTCGT+TGG	-	51709:7873-7892	MS.gene006999:CDS	20.0%
!	AAATTATTATCTACTCAGAC+TGG	-	51709:8332-8351	MS.gene006999:CDS	25.0%
!	AAGTTGTTTGTATTCAGAAA+TGG	+	51709:8918-8937	None:intergenic	25.0%
!	ATATCATGTATAACAATGCA+GGG	-	51709:8939-8958	MS.gene006999:intron	25.0%
!	CTGAAAACTTATTTACAACT+TGG	+	51709:8234-8253	None:intergenic	25.0%
!	GCAACAAAATTCATCAATAA+TGG	-	51709:8761-8780	MS.gene006999:intron	25.0%
!	TCTTATCCCAAAAAATATCA+CGG	-	51709:7842-7861	MS.gene006999:CDS	25.0%
!	TTTCACATCTTTCAAGAATT+TGG	-	51709:9453-9472	MS.gene006999:intron	25.0%
!!!	TGACTAAGAGTATTATATCA+TGG	+	51709:8536-8555	None:intergenic	25.0%
!!!	TTATAGAAAAAGTACTGCAA+GGG	+	51709:7915-7934	None:intergenic	25.0%
	CTTATCCCAAAAAATATCAC+GGG	-	51709:7843-7862	MS.gene006999:CDS	30.0%
	GAAATAATCAGAGAACATGA+AGG	+	51709:8212-8231	None:intergenic	30.0%
	GATATCATGTATAACAATGC+AGG	-	51709:8938-8957	MS.gene006999:intron	30.0%
	GTAGAAATTGTTCGTAATGT+TGG	-	51709:9319-9338	MS.gene006999:CDS	30.0%
	TCATGTTAAGCATTTGTTTG+AGG	-	51709:8043-8062	MS.gene006999:CDS	30.0%
	TGTCAAAAGATTCTAGATTG+AGG	+	51709:8997-9016	None:intergenic	30.0%
	TTATCCCAAAAAATATCACG+GGG	-	51709:7844-7863	MS.gene006999:CDS	30.0%
!	AGAATCTTTTGACAAAGTCA+TGG	-	51709:9003-9022	MS.gene006999:CDS	30.0%
!	TATAGGCATTGTTAAATCCA+TGG	-	51709:9177-9196	MS.gene006999:intron	30.0%
!!	GTTATAGAAAAAGTACTGCA+AGG	+	51709:7916-7935	None:intergenic	30.0%
	AAAGGAGTAGGAATAGCAAA+AGG	+	51709:9247-9266	None:intergenic	35.0%
	AAGGCGATATACAATTGACT+CGG	+	51709:9228-9247	None:intergenic	35.0%
	AATGATGCTAGGTATATCAG+CGG	-	51709:9406-9425	MS.gene006999:intron	35.0%
	AGAGAAACTGAAGGATTGTT+TGG	+	51709:8367-8386	None:intergenic	35.0%
	ATAATCAGAGAACATGAAGG+AGG	+	51709:8209-8228	None:intergenic	35.0%
	ATACTCTGTATCCAAGTTTG+CGG	-	51709:9153-9172	MS.gene006999:intron	35.0%
	CAAGAAACTGCAAAAGAACT+AGG	-	51709:8824-8843	MS.gene006999:intron	35.0%
	CAAGTTATGAAGGTAGCATT+AGG	+	51709:8851-8870	None:intergenic	35.0%
	CATCATTTGATCATCCTCTA+TGG	+	51709:8597-8616	None:intergenic	35.0%
	GTCATGGAAATAAATGTTCG+CGG	-	51709:9019-9038	MS.gene006999:CDS	35.0%
	TATTATCTACTCAGACTGGA+AGG	-	51709:8336-8355	MS.gene006999:CDS	35.0%
	TGCAGCATTAGCAATATCAT+CGG	+	51709:9371-9390	None:intergenic	35.0%
!	GTGTGAGATCTGATTCATTT+TGG	-	51709:8013-8032	MS.gene006999:CDS	35.0%
!	GTTAAGCATTTGTTTGAGGT+TGG	-	51709:8047-8066	MS.gene006999:CDS	35.0%
!	TCATCCTCTATGGTTTCTTT+TGG	+	51709:8587-8606	None:intergenic	35.0%
!!	AAAGTACTGCAAGGGTAATT+TGG	+	51709:7907-7926	None:intergenic	35.0%
!!	CTAGTTCTTTTGCAGTTTCT+TGG	+	51709:8826-8845	None:intergenic	35.0%
!!!	CATACCCCGTGATATTTTTT+GGG	+	51709:7851-7870	None:intergenic	35.0%
	AATAAATGTTCGCGGCGTTA+TGG	-	51709:9027-9046	MS.gene006999:CDS	40.0%
	AATGCCTATAACCGCAAACT+TGG	+	51709:9167-9186	None:intergenic	40.0%
	ACCTAGCATCATTAGATGCA+AGG	+	51709:9399-9418	None:intergenic	40.0%
	ACCTTGCATCTAATGATGCT+AGG	-	51709:9395-9414	MS.gene006999:intron	40.0%
	ATGAATCAGATCTCACACAC+TGG	+	51709:8011-8030	None:intergenic	40.0%
	ATGATGCTAGGTATATCAGC+GGG	-	51709:9407-9426	MS.gene006999:intron	40.0%
	CATAATTTGGTTGTGGATGG+AGG	-	51709:9430-9449	MS.gene006999:intron	40.0%
	GAAAAAATCTCCCCTGTTCA+AGG	-	51709:8285-8304	MS.gene006999:CDS	40.0%
	GCAGCATTAGCAATATCATC+GGG	+	51709:9370-9389	None:intergenic	40.0%
	GCGATACAGTATTCAGTTCA+GGG	+	51709:8465-8484	None:intergenic	40.0%
	GCTGATATCCAACAACAACT+TGG	-	51709:8800-8819	MS.gene006999:intron	40.0%
	GTATATCAGCGGGCATAATT+TGG	-	51709:9417-9436	MS.gene006999:intron	40.0%
	GTATCCAAGTTTGCGGTTAT+AGG	-	51709:9160-9179	MS.gene006999:intron	40.0%
	TAGGCCAAAAGAAACCATAG+AGG	-	51709:8580-8599	MS.gene006999:CDS	40.0%
	TCCATTTCGCTCATGACAAA+AGG	+	51709:9265-9284	None:intergenic	40.0%
	TCCTTCAGTTTCTCTGTCTT+AGG	-	51709:8372-8391	MS.gene006999:CDS	40.0%
	TTAGATTAATCCAACGACCG+AGG	-	51709:8556-8575	MS.gene006999:CDS	40.0%
	TTCGGCAAACTCTTGACTTT+GGG	-	51709:8497-8516	MS.gene006999:CDS	40.0%
	TTGAAGCTCTCAGCAAACAA+AGG	+	51709:8311-8330	None:intergenic	40.0%
	TTTCTTGGCCAAGTTGTTGT+TGG	+	51709:8811-8830	None:intergenic	40.0%
!	TCCTTTTGTCATGAGCGAAA+TGG	-	51709:9261-9280	MS.gene006999:intron	40.0%
!!	ACAAGGTAGCACTGATAACT+GGG	-	51709:8711-8730	MS.gene006999:intron	40.0%
!!	TATCGCCTTTGAAACCTCTT+CGG	-	51709:8479-8498	MS.gene006999:CDS	40.0%
!!!	GCATACCCCGTGATATTTTT+TGG	+	51709:7852-7871	None:intergenic	40.0%
	AAGTCAAGAGTTTGCCGAAG+AGG	+	51709:8496-8515	None:intergenic	45.0%
	AGATTGAGGTCAACAACGCT+TGG	+	51709:8983-9002	None:intergenic	45.0%
	AGCAAACAAAGGCCTTGAAC+AGG	+	51709:8300-8319	None:intergenic	45.0%
	CAAACAAAGGCCTTGAACAG+GGG	+	51709:8298-8317	None:intergenic	45.0%
	CCACATCAGACGTGAATGAA+AGG	+	51709:8672-8691	None:intergenic	45.0%
	CCTTTCATTCACGTCTGATG+TGG	-	51709:8669-8688	MS.gene006999:intron	45.0%
	CTTCGGCAAACTCTTGACTT+TGG	-	51709:8496-8515	MS.gene006999:CDS	45.0%
	GCAAACAAAGGCCTTGAACA+GGG	+	51709:8299-8318	None:intergenic	45.0%
	GCCTAAGACAGAGAAACTGA+AGG	+	51709:8376-8395	None:intergenic	45.0%
	GGCGATACAGTATTCAGTTC+AGG	+	51709:8466-8485	None:intergenic	45.0%
	GGGCATAATTTGGTTGTGGA+TGG	-	51709:9427-9446	MS.gene006999:intron	45.0%
	GTTCACAATTCGCTCCTTTC+AGG	+	51709:9348-9367	None:intergenic	45.0%
	GTTTGCCGAAGAGGTTTCAA+AGG	+	51709:8487-8506	None:intergenic	45.0%
	TAATGCACTTGATCTGGTGC+AGG	+	51709:9484-9503	None:intergenic	45.0%
	TACCTTGTCTTGTAGCTTCC+TGG	+	51709:8699-8718	None:intergenic	45.0%
	TCGCTCATGACAAAAGGAGT+AGG	+	51709:9259-9278	None:intergenic	45.0%
	TCTACTCAGACTGGAAGGTA+TGG	-	51709:8341-8360	MS.gene006999:CDS	45.0%
	TGTGACGTCGCAAGTTATGA+AGG	+	51709:8861-8880	None:intergenic	45.0%
	TTAATCCAACGACCGAGGTT+AGG	-	51709:8561-8580	MS.gene006999:CDS	45.0%
	TTCATTCACGTCTGATGTGG+TGG	-	51709:8672-8691	MS.gene006999:intron	45.0%
!	AACGCTTGGAGGAGTTTTAC+AGG	+	51709:8969-8988	None:intergenic	45.0%
!	ACGCTTGGAGGAGTTTTACA+GGG	+	51709:8968-8987	None:intergenic	45.0%
!	CGTAATGTTGGTGTCCTGAA+AGG	-	51709:9331-9350	MS.gene006999:CDS	45.0%
!	GGTTTCTTTTGGCCTAACCT+CGG	+	51709:8576-8595	None:intergenic	45.0%
!!	AAGGTAGCACTGATAACTGG+GGG	-	51709:8713-8732	MS.gene006999:intron	45.0%
!!	CAAGGTAGCACTGATAACTG+GGG	-	51709:8712-8731	MS.gene006999:intron	45.0%
!!	GACAAGGTAGCACTGATAAC+TGG	-	51709:8710-8729	MS.gene006999:intron	45.0%
!!!	TATATTTTATTTTATAACTT+TGG	-	51709:8181-8200	MS.gene006999:CDS	5.0%
	AGAATGGATCCAGTTCCACG+CGG	+	51709:9085-9104	None:intergenic	50.0%
	AGTCGCTGCAAGTCAAGATG+TGG	+	51709:9298-9317	None:intergenic	50.0%
	CAGCGGGCATAATTTGGTTG+TGG	-	51709:9423-9442	MS.gene006999:intron	50.0%
	GTCCAGGAAGCTACAAGACA+AGG	-	51709:8694-8713	MS.gene006999:intron	50.0%
	TTGAGGTCAACAACGCTTGG+AGG	+	51709:8980-8999	None:intergenic	50.0%
!!	ATTGACTCGGATTCCATGCC+TGG	+	51709:9215-9234	None:intergenic	50.0%
	AATGTTCGCGGCGTTATGGC+TGG	-	51709:9031-9050	MS.gene006999:CDS	55.0%
	ACTGGGGGAGCTAGTGGAAT+AGG	-	51709:8728-8747	MS.gene006999:intron	55.0%
	AGCGTCACTGGTGTGATTGG+AGG	-	51709:9115-9134	MS.gene006999:intron	55.0%
	CACTGGTGTGATTGGAGGGA+TGG	-	51709:9120-9139	MS.gene006999:intron	55.0%
	CCATGGCTTCAGAGCTATCC+AGG	-	51709:9194-9213	MS.gene006999:intron	55.0%
	CTGATAACTGGGGGAGCTAG+TGG	-	51709:8722-8741	MS.gene006999:intron	55.0%
	GAATGGATCCAGTTCCACGC+GGG	+	51709:9084-9103	None:intergenic	55.0%
	GACGCTGGCAGTGCATAGAA+TGG	+	51709:9101-9120	None:intergenic	55.0%
	GCGTCACTGGTGTGATTGGA+GGG	-	51709:9116-9135	MS.gene006999:intron	55.0%
	GCTTCAGAGCTATCCAGGCA+TGG	-	51709:9199-9218	MS.gene006999:intron	55.0%
	GTAATGATCCCGCGTGGAAC+TGG	-	51709:9073-9092	MS.gene006999:intron	55.0%
	TCCAATCACACCAGTGACGC+TGG	+	51709:9116-9135	None:intergenic	55.0%
	TTTGGCCTAACCTCGGTCGT+TGG	+	51709:8569-8588	None:intergenic	55.0%
!!	CCTGGATAGCTCTGAAGCCA+TGG	+	51709:9197-9216	None:intergenic	55.0%
	CACGTCTGATGTGGTGGTCC+AGG	-	51709:8678-8697	MS.gene006999:intron	60.0%
	CTATGCACTGCCAGCGTCAC+TGG	-	51709:9103-9122	MS.gene006999:intron	60.0%
	GCCAGCGTCACTGGTGTGAT+TGG	-	51709:9112-9131	MS.gene006999:intron	60.0%
	GCGCGTGTAATGATCCCGCG+TGG	-	51709:9067-9086	MS.gene006999:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
51709	gene	7837	9504	7837	ID=MS.gene006999
51709	mRNA	7837	9504	7837	ID=MS.gene006999.t1;Parent=MS.gene006999
51709	exon	9476	9504	9476	ID=MS.gene006999.t1.exon1;Parent=MS.gene006999.t1
51709	CDS	9476	9504	9476	ID=cds.MS.gene006999.t1;Parent=MS.gene006999.t1
51709	exon	9277	9354	9277	ID=MS.gene006999.t1.exon2;Parent=MS.gene006999.t1
51709	CDS	9277	9354	9277	ID=cds.MS.gene006999.t1;Parent=MS.gene006999.t1
51709	exon	8984	9055	8984	ID=MS.gene006999.t1.exon3;Parent=MS.gene006999.t1
51709	CDS	8984	9055	8984	ID=cds.MS.gene006999.t1;Parent=MS.gene006999.t1
51709	exon	7837	8641	7837	ID=MS.gene006999.t1.exon4;Parent=MS.gene006999.t1
51709	CDS	7837	8641	7837	ID=cds.MS.gene006999.t1;Parent=MS.gene006999.t1

Gene Sequence

>MS.gene006999

ATGCATCTTATCCCAAAAAATATCACGGGGTATGCATATAATTTGCATATATTCGTTGGCACGTTGACCAAATTACCCTTGCAGTACTTTTTCTATAACAAGCACTGCAAATAACTTGTTTTTTCTCTCTAATTTTTATTTGTCTCATAGGGACTCAAACTACATTACACTCCAGTGTGTGAGATCTGATTCATTTTGGCAGAAAGTCATGTTAAGCATTTGTTTGAGGTTGGTTTCACACTTCATTTTTATGCTCTTATCTATACTTTCAGTTTGATGATTAAAAAATGAAGTATAAGATGTTCTGCTTGTACTTTTCAACTTCTCTATTGAATGAGTGACTGTATATTTTATTTTATAACTTTGGATCCTCCTTCATGTTCTCTGATTATTTCCAAGTTGTAAATAAGTTTTCAGCTTACGTTTTTTCTGCTAATTGTTGAAAACAGAAAAAATCTCCCCTGTTCAAGGCCTTTGTTTGCTGAGAGCTTCAACAAATTATTATCTACTCAGACTGGAAGGTATGGCCAAACAATCCTTCAGTTTCTCTGTCTTAGGCTTACATTTTCTTTTTCTATTTATCTATAAGATGGCAAACTGTTATTTATTATGATAAAAAATGACACCCTGAACTGAATACTGTATCGCCTTTGAAACCTCTTCGGCAAACTCTTGACTTTGGGATTAATTTAACAACCATGATATAATACTCTTAGTCATTAGATTAATCCAACGACCGAGGTTAGGCCAAAAGAAACCATAGAGGATGATCAAATGATGCTCAACATTAAGTAAATATTATCAAAAGGATCTTTGTTGTTTAATGCTAATGCCTTTCATTCACGTCTGATGTGGTGGTCCAGGAAGCTACAAGACAAGGTAGCACTGATAACTGGGGGAGCTAGTGGAATAGGAAAAGCTGCAGCAACAAAATTCATCAATAATGGAGCAAAAGTAATTATTGCTGATATCCAACAACAACTTGGCCAAGAAACTGCAAAAGAACTAGGACCTAATGCTACCTTCATAACTTGCGACGTCACAAAAGAATCAGACATATCTGACGCAGTTGATTTCGCCATTTCTGAATACAAACAACTTGATATCATGTATAACAATGCAGGGATACCCTGTAAAACTCCTCCAAGCGTTGTTGACCTCAATCTAGAATCTTTTGACAAAGTCATGGAAATAAATGTTCGCGGCGTTATGGCTGGCATCAAGCATGCAGCGCGTGTAATGATCCCGCGTGGAACTGGATCCATTCTATGCACTGCCAGCGTCACTGGTGTGATTGGAGGGATGGCGCAGCATACATACTCTGTATCCAAGTTTGCGGTTATAGGCATTGTTAAATCCATGGCTTCAGAGCTATCCAGGCATGGAATCCGAGTCAATTGTATATCGCCTTTTGCTATTCCTACTCCTTTTGTCATGAGCGAAATGGATCAGATATATCCACATCTTGACTTGCAGCGACTTGTAGAAATTGTTCGTAATGTTGGTGTCCTGAAAGGAGCGAATTGTGAACCCGATGATATTGCTAATGCTGCACTTTACCTTGCATCTAATGATGCTAGGTATATCAGCGGGCATAATTTGGTTGTGGATGGAGGTTTCACATCTTTCAAGAATTTGGAGTTTCCTGCACCAGATCAAGTGCATTAG

Protein sequence

>MS.gene006999.t1

MHLIPKNITGDSNYITLQCVRSDSFWQKVMLSICLRKNLPCSRPLFAESFNKLLSTQTGRKLQDKVALITGGASGIGKAAATKFINNGAKVIIADIQQQLGQETAKELGPNATFITCDVTKESDISDAVDFAISEYKQLDIMYNNAGIPCKTPPSVVDLNLESFDKVMEINVRGVMAGIKHAARVMIPRGTGSILCTASVTGVIGGMAQHTYSVSKFAVIGIVKSMASELSRHGIRVNCISPFAIPTPFVMSEMDQIYPHLDLQRLVEIVRNVGVLKGANCEPDDIANAALYLASNDARYISGHNLVVDGGFTSFKNLEFPAPDQVH