AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene73088

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73088.t1 MTR_3g020670 97.857 280 6 0 1 280 1 280 0.0 560
MS.gene73088.t1 MTR_7g071680 50.355 282 125 4 8 276 21 300 1.08e-88 266
MS.gene73088.t1 MTR_4g052350 49.084 273 129 3 8 280 6 268 1.31e-82 249
MS.gene73088.t1 MTR_4g052340 48.148 270 130 2 10 279 8 267 1.59e-82 249
MS.gene73088.t1 MTR_4g052320 48.000 275 129 3 5 279 2 262 7.82e-82 247
MS.gene73088.t1 MTR_4g052300 47.826 276 129 4 5 280 2 262 6.56e-80 242
MS.gene73088.t1 MTR_7g105460 48.188 276 131 4 9 280 3 270 6.25e-74 228
MS.gene73088.t1 MTR_7g107670 44.106 263 144 2 8 270 25 284 2.01e-71 222
MS.gene73088.t1 MTR_7g083870 45.185 270 132 4 8 270 27 287 4.26e-71 221
MS.gene73088.t1 MTR_4g078630 45.283 265 138 4 11 273 15 274 2.24e-69 216
MS.gene73088.t1 MTR_7g110130 45.977 261 133 3 14 273 4 257 2.64e-68 213
MS.gene73088.t1 MTR_7g110140 47.674 258 124 5 15 270 5 253 1.31e-67 211
MS.gene73088.t1 MTR_2g090165 45.660 265 133 5 14 276 4 259 2.53e-65 205
MS.gene73088.t1 MTR_7g105580 40.824 267 125 4 13 275 5 242 6.45e-64 201
MS.gene73088.t1 MTR_7g105590 51.351 185 89 1 14 198 6 189 1.36e-63 198
MS.gene73088.t1 MTR_6g023590 44.186 258 133 5 15 269 12 261 2.88e-62 197
MS.gene73088.t1 MTR_7g110160 44.151 265 121 4 14 277 4 242 2.32e-60 192
MS.gene73088.t1 MTR_6g023990 43.798 258 134 5 15 269 13 262 3.08e-60 192
MS.gene73088.t1 MTR_6g035395 44.402 259 120 5 14 270 3 239 9.14e-59 188
MS.gene73088.t1 MTR_6g023950 43.243 259 138 5 15 271 12 263 9.12e-57 183
MS.gene73088.t1 MTR_6g023600 44.015 259 132 6 15 269 12 261 2.06e-56 182
MS.gene73088.t1 MTR_6g023610 39.394 264 151 4 15 276 12 268 6.93e-55 179
MS.gene73088.t1 MTR_6g023600 43.629 259 127 7 15 269 12 255 1.07e-53 175
MS.gene73088.t1 MTR_6g023910 40.078 257 145 4 15 269 12 261 3.93e-53 174
MS.gene73088.t1 MTR_7g105570 51.295 193 86 2 89 280 42 227 1.69e-52 171
MS.gene73088.t1 MTR_3g113870 43.386 189 105 1 24 212 29 215 6.72e-50 164
MS.gene73088.t1 MTR_4g084800 45.775 142 73 2 9 147 3 143 1.69e-36 127
MS.gene73088.t1 MTR_1g082760 31.955 266 159 6 12 268 36 288 1.92e-29 113
MS.gene73088.t1 MTR_7g113650 30.827 266 162 6 12 268 36 288 1.10e-27 108
MS.gene73088.t1 MTR_3g085740 31.321 265 154 7 14 269 73 318 1.43e-27 108
MS.gene73088.t1 MTR_4g132850 34.483 261 149 9 14 269 5 248 3.62e-26 103
MS.gene73088.t1 MTR_4g131740 29.963 267 164 7 12 268 36 289 4.07e-25 101
MS.gene73088.t1 MTR_7g094520 30.224 268 169 5 9 269 3 259 1.23e-24 99.8
MS.gene73088.t1 MTR_7g094510 32.234 273 142 8 16 269 6 254 2.09e-24 99.0
MS.gene73088.t1 MTR_3g068070 31.128 257 164 6 16 270 15 260 4.01e-24 98.6
MS.gene73088.t1 MTR_4g064887 31.136 273 163 9 6 270 5 260 7.69e-24 97.8
MS.gene73088.t1 MTR_3g068085 32.308 260 157 9 16 270 15 260 2.65e-23 96.3
MS.gene73088.t1 MTR_3g068155 32.472 271 168 8 4 270 5 264 5.59e-23 95.5
MS.gene73088.t1 MTR_1196s0010 30.153 262 151 7 19 271 277 515 3.51e-22 96.3
MS.gene73088.t1 MTR_4g058840 31.022 274 157 8 12 270 7 263 9.16e-22 92.4
MS.gene73088.t1 MTR_4g058820 31.022 274 157 8 12 270 7 263 9.16e-22 92.4
MS.gene73088.t1 MTR_4g058810 30.483 269 165 7 12 270 7 263 1.21e-21 92.0
MS.gene73088.t1 MTR_3g068175 33.721 258 156 8 16 270 17 262 1.82e-20 88.6
MS.gene73088.t1 MTR_3g068065 30.769 260 161 8 16 270 17 262 3.28e-20 88.2
MS.gene73088.t1 MTR_4g064883 31.154 260 160 8 16 270 14 259 3.50e-19 85.1
MS.gene73088.t1 MTR_1g051165 29.927 274 165 9 12 270 10 271 1.75e-18 83.6
MS.gene73088.t1 MTR_3g068175 33.206 262 156 9 16 270 17 266 2.06e-18 83.2
MS.gene73088.t1 MTR_7g063330 33.588 262 154 8 16 270 15 263 8.56e-18 81.3
MS.gene73088.t1 MTR_4g097510 28.718 195 134 5 19 212 5 195 8.07e-17 79.0
MS.gene73088.t1 MTR_7g063320 32.830 265 151 9 16 269 15 263 9.36e-17 78.6
MS.gene73088.t1 MTR_4g064887 31.579 209 127 6 6 206 5 205 3.08e-16 76.3
MS.gene73088.t1 MTR_1g068955 29.008 262 162 7 16 267 14 261 3.18e-16 77.0
MS.gene73088.t1 MTR_4g064883 34.359 195 118 6 16 205 14 203 5.69e-16 75.1
MS.gene73088.t1 MTR_4g086400 31.364 220 131 8 18 223 6 219 6.38e-16 77.8
MS.gene73088.t1 MTR_7g063270 30.739 257 168 6 16 270 16 264 1.19e-15 75.5
MS.gene73088.t1 MTR_4g086410 32.589 224 123 10 18 223 6 219 5.81e-15 75.1
MS.gene73088.t1 MTR_7g063260 30.739 257 169 5 16 270 16 265 6.31e-15 73.2
MS.gene73088.t1 MTR_8g096580 30.500 200 129 6 19 213 48 242 6.76e-15 73.9
MS.gene73088.t1 MTR_3g087850 29.787 188 123 5 20 205 30 210 9.65e-15 73.2
MS.gene73088.t1 MTR_7g063360 30.350 257 170 5 16 270 16 265 6.19e-14 70.5
MS.gene73088.t1 MTR_3g087860 30.556 144 95 3 63 205 56 195 6.45e-12 65.1
MS.gene73088.t1 MTR_4g058830 31.613 155 95 4 119 270 63 209 2.11e-11 62.4
MS.gene73088.t1 MTR_8g096620 25.092 271 175 8 18 279 47 298 5.28e-11 62.8
MS.gene73088.t1 MTR_1304s0010 30.612 196 118 7 77 270 28 207 9.32e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene73088.t1 AT1G52340 68.889 270 81 1 14 280 16 285 1.96e-134 382
MS.gene73088.t1 AT3G51680 48.708 271 130 4 9 270 25 295 1.77e-75 233
MS.gene73088.t1 AT3G26770 46.947 262 129 5 13 270 38 293 3.96e-74 229
MS.gene73088.t1 AT3G29250 46.304 257 129 4 15 270 5 253 5.60e-69 214
MS.gene73088.t1 AT2G47130 45.136 257 131 4 15 270 5 252 8.77e-69 214
MS.gene73088.t1 AT3G29250 46.304 257 129 4 15 270 41 289 4.44e-68 213
MS.gene73088.t1 AT3G29250 45.489 266 136 4 6 270 34 291 4.87e-68 213
MS.gene73088.t1 AT3G26760 43.071 267 140 4 10 270 30 290 7.31e-68 213
MS.gene73088.t1 AT4G03140 45.136 257 138 3 14 270 76 329 2.39e-67 213
MS.gene73088.t1 AT3G29260 44.574 258 133 4 14 270 4 252 5.81e-66 207
MS.gene73088.t1 AT2G47140 43.411 258 137 4 14 270 4 253 2.93e-65 205
MS.gene73088.t1 AT2G47120 44.358 257 132 6 15 270 5 251 4.12e-62 197
MS.gene73088.t1 AT2G47120 43.969 257 133 5 15 270 6 252 4.20e-62 197
MS.gene73088.t1 AT3G42960 41.045 268 149 6 14 277 6 268 3.40e-50 167
MS.gene73088.t1 AT5G18210 31.835 267 158 7 16 271 8 261 4.78e-27 106
MS.gene73088.t1 AT2G29310 33.582 268 157 8 16 277 7 259 1.37e-25 102
MS.gene73088.t1 AT1G54870 30.075 266 164 6 12 268 78 330 1.84e-25 103
MS.gene73088.t1 AT1G54870 30.075 266 164 6 12 268 80 332 2.06e-25 103
MS.gene73088.t1 AT5G06060 31.907 257 162 6 16 270 9 254 2.16e-25 102
MS.gene73088.t1 AT2G30670 32.584 267 161 8 16 277 7 259 4.28e-25 100
MS.gene73088.t1 AT4G13180 33.080 263 153 8 16 269 13 261 1.11e-24 100
MS.gene73088.t1 AT2G29340 32.721 272 154 9 16 277 7 259 1.32e-24 99.8
MS.gene73088.t1 AT2G29340 32.721 272 154 9 16 277 7 259 1.89e-24 100
MS.gene73088.t1 AT3G05260 30.337 267 163 6 12 269 33 285 1.90e-24 99.8
MS.gene73088.t1 AT1G24360 30.916 262 159 8 14 269 72 317 9.41e-24 98.6
MS.gene73088.t1 AT2G47150 29.921 254 114 6 18 269 3 194 1.55e-23 95.5
MS.gene73088.t1 AT2G29360 30.714 280 179 7 1 277 1 268 1.91e-23 96.7
MS.gene73088.t1 AT4G05530 33.333 270 140 10 14 269 7 250 2.33e-23 96.3
MS.gene73088.t1 AT5G18210 32.530 249 144 7 16 253 8 243 7.51e-23 95.5
MS.gene73088.t1 AT2G29330 32.836 268 159 8 16 277 7 259 6.63e-22 92.4
MS.gene73088.t1 AT2G29320 32.117 274 154 10 16 277 13 266 1.24e-21 92.0
MS.gene73088.t1 AT3G55290 32.234 273 155 10 12 270 14 270 2.24e-21 91.3
MS.gene73088.t1 AT3G55290 32.234 273 155 10 12 270 13 269 2.59e-21 91.3
MS.gene73088.t1 AT2G29350 31.250 272 161 8 16 279 15 268 3.05e-21 90.9
MS.gene73088.t1 AT3G03980 30.657 274 164 7 10 269 8 269 4.75e-21 90.5
MS.gene73088.t1 AT2G17845 31.321 265 159 9 16 268 47 300 5.96e-21 90.9
MS.gene73088.t1 AT2G29150 30.943 265 167 8 16 277 16 267 8.72e-21 89.7
MS.gene73088.t1 AT3G55310 30.325 277 155 9 12 270 13 269 1.18e-20 89.4
MS.gene73088.t1 AT3G04000 30.515 272 166 6 10 268 8 269 2.21e-20 88.6
MS.gene73088.t1 AT2G29290 30.769 260 161 9 16 270 7 252 3.55e-20 87.8
MS.gene73088.t1 AT1G62610 29.151 271 167 8 12 270 9 266 4.19e-20 87.8
MS.gene73088.t1 AT1G62610 29.151 271 167 8 12 270 15 272 4.19e-20 87.8
MS.gene73088.t1 AT1G62610 29.151 271 167 8 12 270 10 267 4.38e-20 87.8
MS.gene73088.t1 AT1G62610 29.151 271 167 8 12 270 11 268 4.45e-20 87.8
MS.gene73088.t1 AT2G29300 30.000 270 151 10 16 270 7 253 4.85e-20 87.4
MS.gene73088.t1 AT1G07450 30.712 267 165 9 16 277 8 259 5.82e-20 87.0
MS.gene73088.t1 AT1G63380 28.782 271 168 8 12 270 11 268 6.21e-20 87.4
MS.gene73088.t1 AT1G63380 28.782 271 168 8 12 270 15 272 6.66e-20 87.4
MS.gene73088.t1 AT1G63380 28.782 271 168 8 12 270 13 270 7.23e-20 87.4
MS.gene73088.t1 AT2G29370 30.882 272 165 10 12 276 12 267 7.49e-20 87.0
MS.gene73088.t1 AT1G63380 28.782 271 168 8 12 270 18 275 7.55e-20 87.4
MS.gene73088.t1 AT2G29300 30.000 270 151 10 16 270 7 253 1.53e-19 86.7
MS.gene73088.t1 AT3G46170 30.224 268 167 7 12 270 22 278 2.31e-19 85.9
MS.gene73088.t1 AT5G65205 30.588 255 153 10 20 261 10 253 5.10e-19 85.1
MS.gene73088.t1 AT1G07440 30.000 270 171 8 13 277 7 263 5.21e-19 84.7
MS.gene73088.t1 AT2G29310 31.474 251 151 8 33 277 22 257 1.31e-18 83.6
MS.gene73088.t1 AT2G29260 29.259 270 170 5 7 270 59 313 2.63e-18 83.6
MS.gene73088.t1 AT1G49670 34.615 208 113 7 18 208 6 207 1.62e-17 82.8
MS.gene73088.t1 AT1G49670 34.615 208 113 7 18 208 6 207 1.89e-17 82.4
MS.gene73088.t1 AT2G29340 33.831 201 113 6 16 206 7 197 2.15e-17 79.0
MS.gene73088.t1 AT2G29340 33.831 201 113 6 16 206 7 197 2.15e-17 79.0
MS.gene73088.t1 AT2G29310 34.518 197 117 5 16 206 7 197 9.12e-17 77.0
MS.gene73088.t1 AT5G10050 27.917 240 154 7 20 248 9 240 1.10e-16 78.6
MS.gene73088.t1 AT3G12800 30.292 274 154 12 18 273 12 266 1.91e-15 75.1
MS.gene73088.t1 AT2G29320 28.906 256 152 9 33 277 12 248 2.89e-15 73.9
MS.gene73088.t1 AT2G29350 32.487 197 117 7 18 206 17 205 9.95e-15 72.0
MS.gene73088.t1 AT2G29320 35.204 196 112 7 16 203 13 201 1.20e-14 71.6
MS.gene73088.t1 AT1G10310 29.902 204 139 4 3 205 2 202 2.85e-14 71.2
MS.gene73088.t1 AT2G29350 29.675 246 147 8 42 279 3 230 3.28e-14 70.9
MS.gene73088.t1 AT3G01980 26.259 278 179 9 12 279 4 265 2.21e-13 68.9
MS.gene73088.t1 AT3G01980 26.259 278 179 9 12 279 4 265 2.21e-13 68.9
MS.gene73088.t1 AT3G01980 27.948 229 149 7 57 279 23 241 5.11e-12 64.7
MS.gene73088.t1 AT3G03330 28.643 199 121 6 18 203 43 233 3.00e-11 63.5
MS.gene73088.t1 AT5G50770 28.780 205 131 7 1 198 30 226 4.35e-11 62.8

Find 76 sgRNAs with CRISPR-Local

Find 197 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCAACAATGCCGGAATTTC+CGG 0.202788 3.2:+10563219 MS.gene73088:CDS
TCTATCTCTCTCAGGTTATT+AGG 0.287185 3.2:+10562955 MS.gene73088:intron
GCAAGTTCCTTAGGAGGTTT+AGG 0.288269 3.2:+10563393 MS.gene73088:CDS
AAAGAATGTTGCAGCTGAAT+TGG 0.300735 3.2:+10563461 MS.gene73088:CDS
AACGATGCTTTCTCCGATTC+CGG 0.317725 3.2:-10563007 None:intergenic
AAGAATGTTGCAGCTGAATT+GGG 0.332776 3.2:+10563462 MS.gene73088:CDS
ATGTCCACATTGCGGATATC+AGG 0.351551 3.2:-10563252 None:intergenic
AAGCCTGTTGCGACACAATA+AGG 0.355669 3.2:-10563516 None:intergenic
TCCATCGCTGTCGCTAAATT+CGG 0.356261 3.2:+10563180 MS.gene73088:CDS
ACACGGTGCTCCGGAAATTC+CGG 0.368493 3.2:-10563229 None:intergenic
GAAACATGCTGCTCAATATC+TGG 0.381975 3.2:+10563329 MS.gene73088:CDS
TGTCGCAACAGGCTTGGCTT+TGG 0.406907 3.2:+10563524 MS.gene73088:CDS
CTTTGATTCCTTAAGTGATC+CGG 0.413172 3.2:+10563098 MS.gene73088:CDS
TCACCTTATTGTGTCGCAAC+AGG 0.413297 3.2:+10563513 MS.gene73088:CDS
TTATTAATGTACCTTTGTGC+TGG 0.426595 3.2:-10560783 None:intergenic
GGTAAAGTGGCTGTGGTAAC+TGG 0.438322 3.2:+10562976 MS.gene73088:CDS
TCCAAGGTCGTCTTGGACAT+CGG 0.440509 3.2:-10563067 None:intergenic
TAGCACCATGGGTATGGAAT+AGG 0.450060 3.2:-10563032 None:intergenic
AGTATTTAACATAAATGTAA+AGG 0.453129 3.2:+10563290 MS.gene73088:CDS
CACAGTTCACTCTTATTCCA+TGG 0.457652 3.2:-10563488 None:intergenic
AGCAGAAGTGAAAGCATTGA+TGG 0.458087 3.2:-10560760 None:intergenic
GGAGAGAATCTGATGGTTGA+TGG 0.464560 3.2:+10563702 MS.gene73088:CDS
TCCTCAGTTCTCTCATCCTC+AGG 0.465574 3.2:-10563555 None:intergenic
ACTGGTGGAGCCTCCGGAAT+CGG 0.466784 3.2:+10562994 MS.gene73088:CDS
TAATCCCCACACAGCATGCT+TGG 0.473559 3.2:-10563436 None:intergenic
GTGGTAACTGGTGGAGCCTC+CGG 0.474243 3.2:+10562988 MS.gene73088:CDS
GATGATGCAAAGTATATAAG+TGG 0.480032 3.2:+10563681 MS.gene73088:CDS
TCAAGTGTAGCAAGTTCCTT+AGG 0.484076 3.2:+10563384 MS.gene73088:CDS
GTATTTAACATAAATGTAAA+GGG 0.489627 3.2:+10563291 MS.gene73088:CDS
GCTTCTGTCCAAGGTCGTCT+TGG 0.493536 3.2:-10563074 None:intergenic
TTATTGTGTCGCAACAGGCT+TGG 0.494016 3.2:+10563518 MS.gene73088:CDS
AAACTTTAGCACCATGGGTA+TGG 0.496130 3.2:-10563038 None:intergenic
GAGCAGCATGTTTCATTCCA+TGG 0.496219 3.2:-10563320 None:intergenic
GACATCATGGTCAACAATGC+CGG 0.499370 3.2:+10563210 MS.gene73088:CDS
GATATCAGGACACGGTGCTC+CGG 0.510416 3.2:-10563238 None:intergenic
CCATTGTGATGTCGCGGTAG+AGG 0.514187 3.2:+10563137 MS.gene73088:CDS
GGCTTTGGCTCATTTGCCTG+AGG 0.514712 3.2:+10563539 MS.gene73088:CDS
AGGTTCCAAGCATGCTGTGT+GGG 0.524350 3.2:+10563431 MS.gene73088:CDS
ATGCGGTCCTAAACCTCCTA+AGG 0.532992 3.2:-10563400 None:intergenic
TCTCAGGTTATTAGGTAAAG+TGG 0.551318 3.2:+10562963 MS.gene73088:intron
AATCAAAGAGCTTCTGTCCA+AGG 0.553131 3.2:-10563083 None:intergenic
ATTCGGCACTCTAGACATCA+TGG 0.560079 3.2:+10563197 MS.gene73088:CDS
TGATATCCGCAATGTGGACA+TGG 0.561276 3.2:+10563254 MS.gene73088:CDS
GTTATTAGGTAAAGTGGCTG+TGG 0.563587 3.2:+10562969 MS.gene73088:CDS
AGTGTAGCAAGTTCCTTAGG+AGG 0.566545 3.2:+10563387 MS.gene73088:CDS
GCCGAATTTAGCGACAGCGA+TGG 0.567679 3.2:-10563181 None:intergenic
AGAACTGAGGATGCCATGGC+TGG 0.571701 3.2:+10563567 MS.gene73088:CDS
TATCTGGTCCCGAAGAAAAG+TGG 0.572628 3.2:+10563345 MS.gene73088:CDS
AGAATGTTGCAGCTGAATTG+GGG 0.576112 3.2:+10563463 MS.gene73088:CDS
GCCGATGTCCAAGACGACCT+TGG 0.579145 3.2:+10563066 MS.gene73088:CDS
ACTTTGCATCATCACTTGCA+AGG 0.589403 3.2:-10563671 None:intergenic
GTTCGCCTATTCCATACCCA+TGG 0.598440 3.2:+10563027 MS.gene73088:CDS
TATACAAACTTTAGCACCAT+GGG 0.600611 3.2:-10563043 None:intergenic
GATGCTTTCTCCGATTCCGG+AGG 0.609404 3.2:-10563004 None:intergenic
TTAGGAGGTTTAGGACCGCA+TGG 0.612259 3.2:+10563402 MS.gene73088:CDS
GGTTCCAAGCATGCTGTGTG+GGG 0.621291 3.2:+10563432 MS.gene73088:CDS
TTAGGACCGCATGGATACAC+AGG 0.626585 3.2:+10563411 MS.gene73088:CDS
AAAAGAACGAAAACCAGCCA+TGG 0.626631 3.2:-10563580 None:intergenic
ATCACTTGCAAGGAAGAGCA+CGG 0.637744 3.2:-10563661 None:intergenic
TGAGAGAACTGAGGATGCCA+TGG 0.637860 3.2:+10563563 MS.gene73088:CDS
CCTCTACCGCGACATCACAA+TGG 0.645195 3.2:-10563137 None:intergenic
AGAGTTAACTGCTGACGATG+TGG 0.658705 3.2:+10563632 MS.gene73088:CDS
GCAGCTGAATTGGGGAACCA+TGG 0.659571 3.2:+10563471 MS.gene73088:CDS
TATAAGTGGAGAGAATCTGA+TGG 0.659662 3.2:+10563695 MS.gene73088:CDS
CTATACAAACTTTAGCACCA+TGG 0.660195 3.2:-10563044 None:intergenic
CAGGTTCCAAGCATGCTGTG+TGG 0.666698 3.2:+10563430 MS.gene73088:CDS
ATTCTGCCATGTCCACATTG+CGG 0.674841 3.2:-10563260 None:intergenic
GAGAATCTGATGGTTGATGG+AGG 0.675115 3.2:+10563705 MS.gene73088:CDS
TCACTTCTGCTCCAGCACAA+AGG 0.677267 3.2:+10560772 MS.gene73088:CDS
AAAGTGGCTGTGGTAACTGG+TGG 0.679254 3.2:+10562979 MS.gene73088:CDS
GTGTCCTGATATCCGCAATG+TGG 0.687874 3.2:+10563248 MS.gene73088:CDS
TTTCGTCCATTGTGATGTCG+CGG 0.702507 3.2:+10563131 MS.gene73088:CDS
GACAGCGATGGATACTGCAG+TGG 0.704928 3.2:-10563169 None:intergenic
ACATTGCGGATATCAGGACA+CGG 0.742356 3.2:-10563246 None:intergenic
GCCTGAGGATGAGAGAACTG+AGG 0.754801 3.2:+10563554 MS.gene73088:CDS
TTGGAACCTGTGTATCCATG+CGG 0.754889 3.2:-10563417 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAGATCAATAATAATTAAA+CGG - chr3.2:10560973-10560992 None:intergenic 10.0%
!! TATTGATCATAAAATAATAT+GGG + chr3.2:10561258-10561277 MS.gene73088:intron 10.0%
!! TTATTGATCATAAAATAATA+TGG + chr3.2:10561257-10561276 MS.gene73088:intron 10.0%
!!! AATTTTGAAAAGATAATATT+TGG + chr3.2:10562457-10562476 MS.gene73088:intron 10.0%
!!! ATTATCTTTTCAAAATTATA+GGG - chr3.2:10562454-10562473 None:intergenic 10.0%
!!! TATTATCTTTTCAAAATTAT+AGG - chr3.2:10562455-10562474 None:intergenic 10.0%
!! AGTATTTAACATAAATGTAA+AGG + chr3.2:10563290-10563309 MS.gene73088:CDS 15.0%
!! GTATTTAACATAAATGTAAA+GGG + chr3.2:10563291-10563310 MS.gene73088:CDS 15.0%
!! AGAATTGATTATGACATATT+TGG + chr3.2:10561383-10561402 MS.gene73088:intron 20.0%
!! CAAAAAGGATAATTTAATGA+AGG + chr3.2:10562587-10562606 MS.gene73088:intron 20.0%
!! CAAATTATTAAAATACTGAG+TGG - chr3.2:10562917-10562936 None:intergenic 20.0%
!! TTGAAGATACTAAAATCAAA+CGG + chr3.2:10561993-10562012 MS.gene73088:intron 20.0%
!!! CACATTTTATTTTTACATGA+AGG + chr3.2:10561489-10561508 MS.gene73088:intron 20.0%
!!! GCTTTAAAATAAATTAAGTG+CGG - chr3.2:10561674-10561693 None:intergenic 20.0%
!!! GTTTAACTTTCATAATAAGA+CGG + chr3.2:10562053-10562072 MS.gene73088:intron 20.0%
!!! TTATGAAGCAATTTGAATTT+TGG - chr3.2:10561849-10561868 None:intergenic 20.0%
!!! TTATGATTGTTTTCATGTTT+GGG + chr3.2:10561292-10561311 MS.gene73088:intron 20.0%
!!! TTTATGATTGTTTTCATGTT+TGG + chr3.2:10561291-10561310 MS.gene73088:intron 20.0%
! AAATTCAGAAATCAGTGAAA+TGG - chr3.2:10562807-10562826 None:intergenic 25.0%
! AAATTGCTTCATAATGAGTT+TGG + chr3.2:10561855-10561874 MS.gene73088:intron 25.0%
! ATAGAAATCACATAATTTGG+GGG - chr3.2:10561801-10561820 None:intergenic 25.0%
! CATAGAAATCACATAATTTG+GGG - chr3.2:10561802-10561821 None:intergenic 25.0%
! CCATAGAAATCACATAATTT+GGG - chr3.2:10561803-10561822 None:intergenic 25.0%
! GAGTTTGGTTATATAATTTG+AGG + chr3.2:10561870-10561889 MS.gene73088:intron 25.0%
! GTTTGGCATGAAAAAAATTA+TGG + chr3.2:10562233-10562252 MS.gene73088:intron 25.0%
! TCCATAGAAATCACATAATT+TGG - chr3.2:10561804-10561823 None:intergenic 25.0%
! TCTTAACTATAAGTAGAATG+TGG - chr3.2:10561435-10561454 None:intergenic 25.0%
! TGTATGATGTATTGTTTGAA+TGG + chr3.2:10562336-10562355 MS.gene73088:intron 25.0%
! TTCTTGTATTTAGATGAGTT+TGG + chr3.2:10562216-10562235 MS.gene73088:intron 25.0%
!!! AATTTGCTACTAATAGTATG+AGG + chr3.2:10562526-10562545 MS.gene73088:intron 25.0%
!!! ATTCTTAGCAAGACTTTTTT+TGG + chr3.2:10560843-10560862 MS.gene73088:intron 25.0%
!!! TCTTTTTCACTTGTAAAAGA+CGG - chr3.2:10562758-10562777 None:intergenic 25.0%
!!! TTTCACTGATTTCTGAATTT+TGG + chr3.2:10562807-10562826 MS.gene73088:intron 25.0%
AACAAACATGGTTGAGAAAT+CGG - chr3.2:10561903-10561922 None:intergenic 30.0%
AATATAGACATGTGTCTGTT+TGG - chr3.2:10561584-10561603 None:intergenic 30.0%
AGCTATGTATTTCTCAGATA+TGG + chr3.2:10562486-10562505 MS.gene73088:intron 30.0%
CCCAAATTATGTGATTTCTA+TGG + chr3.2:10561800-10561819 MS.gene73088:intron 30.0%
GATGATGCAAAGTATATAAG+TGG + chr3.2:10563681-10563700 MS.gene73088:CDS 30.0%
TATACAAACTTTAGCACCAT+GGG - chr3.2:10563046-10563065 None:intergenic 30.0%
TTAATCCTGAATTTGGTCAA+AGG - chr3.2:10562679-10562698 None:intergenic 30.0%
TTAATGAAGGTTGAATCGAT+CGG + chr3.2:10562600-10562619 MS.gene73088:intron 30.0%
TTATTAATGTACCTTTGTGC+TGG - chr3.2:10560786-10560805 None:intergenic 30.0%
! ACAGACACATGTCTATATTT+TGG + chr3.2:10561585-10561604 MS.gene73088:intron 30.0%
! AGGTAAGTAAATTCTAGCTA+AGG - chr3.2:10562659-10562678 None:intergenic 30.0%
! CTACACCAGATTTAAAACTA+TGG - chr3.2:10562160-10562179 None:intergenic 30.0%
! GATTTCTGAATTTTGGATTC+TGG + chr3.2:10562814-10562833 MS.gene73088:intron 30.0%
! GCATGACAGTTTTTATATGT+TGG - chr3.2:10562315-10562334 None:intergenic 30.0%
! TACACATCCACAATCAATTT+TGG - chr3.2:10561364-10561383 None:intergenic 30.0%
! TGGACGAAAAAAACATTTTC+CGG - chr3.2:10563120-10563139 None:intergenic 30.0%
!! AAACACAAACCACTTTTAGT+CGG + chr3.2:10561519-10561538 MS.gene73088:intron 30.0%
!! CTAAAAGTGGTTTGTGTTTT+TGG - chr3.2:10561518-10561537 None:intergenic 30.0%
!!! ATTATTGAGCCACTTTTCTT+CGG - chr3.2:10563357-10563376 None:intergenic 30.0%
!!! CATAGTTTTAAATCTGGTGT+AGG + chr3.2:10562158-10562177 MS.gene73088:intron 30.0%
!!! TGAATTTTGGATTCTGGTTT+TGG + chr3.2:10562820-10562839 MS.gene73088:intron 30.0%
!!! TTTGAATTTTGGCTCAGAAA+TGG - chr3.2:10561838-10561857 None:intergenic 30.0%
AAAGAATGTTGCAGCTGAAT+TGG + chr3.2:10563461-10563480 MS.gene73088:CDS 35.0%
AAAGTAACTCCGACTAAAAG+TGG - chr3.2:10561531-10561550 None:intergenic 35.0%
AACAAATAAGAGATCTGCTG+AGG + chr3.2:10560992-10561011 MS.gene73088:intron 35.0%
AAGAATGTTGCAGCTGAATT+GGG + chr3.2:10563462-10563481 MS.gene73088:CDS 35.0%
ACAAACATGGTTGAGAAATC+GGG - chr3.2:10561902-10561921 None:intergenic 35.0%
ACTTACCTTTGACCAAATTC+AGG + chr3.2:10562671-10562690 MS.gene73088:intron 35.0%
CTATACAAACTTTAGCACCA+TGG - chr3.2:10563047-10563066 None:intergenic 35.0%
CTTTAGACCTGCAAATATGT+TGG - chr3.2:10562133-10562152 None:intergenic 35.0%
CTTTGATTCCTTAAGTGATC+CGG + chr3.2:10563098-10563117 MS.gene73088:CDS 35.0%
GACCAAATTCAGGATTAACA+GGG + chr3.2:10562681-10562700 MS.gene73088:intron 35.0%
GATTTCTCAACCATGTTTGT+TGG + chr3.2:10561902-10561921 MS.gene73088:intron 35.0%
GTTTAGAAGGACTATATGCT+TGG + chr3.2:10561321-10561340 MS.gene73088:intron 35.0%
TAATGAAGGTTGAATCGATC+GGG + chr3.2:10562601-10562620 MS.gene73088:intron 35.0%
TATAAGTGGAGAGAATCTGA+TGG + chr3.2:10563695-10563714 MS.gene73088:CDS 35.0%
TCTATCTCTCTCAGGTTATT+AGG + chr3.2:10562955-10562974 MS.gene73088:intron 35.0%
TCTCAGGTTATTAGGTAAAG+TGG + chr3.2:10562963-10562982 MS.gene73088:intron 35.0%
TGACCAAATTCAGGATTAAC+AGG + chr3.2:10562680-10562699 MS.gene73088:intron 35.0%
TTCAAAACATCCAGATCCTA+AGG - chr3.2:10562277-10562296 None:intergenic 35.0%
! AACATTTTCCGGATCACTTA+AGG - chr3.2:10563109-10563128 None:intergenic 35.0%
! AATGTAAAGGGAGTTTTCCA+TGG + chr3.2:10563303-10563322 MS.gene73088:CDS 35.0%
! CAGTTTTTATATGTTGGTGC+AGG - chr3.2:10562309-10562328 None:intergenic 35.0%
! TGATTGTTTTCATGTTTGGG+TGG + chr3.2:10561295-10561314 MS.gene73088:intron 35.0%
! TTCTGTCGATTAAATCGATC+TGG + chr3.2:10561407-10561426 MS.gene73088:intron 35.0%
!! CTGGTTTTCGTTCTTTTGTT+GGG + chr3.2:10563586-10563605 MS.gene73088:CDS 35.0%
!! TCTTCAAGTTGTTGACTTGA+TGG + chr3.2:10561025-10561044 MS.gene73088:intron 35.0%
!!! ACTTTTTTGTCTTAACCCTC+CGG - chr3.2:10562724-10562743 None:intergenic 35.0%
!!! GCGAACCATAGTTTTAAATC+TGG + chr3.2:10562152-10562171 MS.gene73088:intron 35.0%
!!! TCCTTTTTGAACTTTGAGAC+CGG - chr3.2:10562576-10562595 None:intergenic 35.0%
!!! TTATTGAGCCACTTTTCTTC+GGG - chr3.2:10563356-10563375 None:intergenic 35.0%
AAAAGAACGAAAACCAGCCA+TGG - chr3.2:10563583-10563602 None:intergenic 40.0%
AAACATCCAGATCCTAAGGA+TGG - chr3.2:10562273-10562292 None:intergenic 40.0%
AAACTTTAGCACCATGGGTA+TGG - chr3.2:10563041-10563060 None:intergenic 40.0%
AATCAAAGAGCTTCTGTCCA+AGG - chr3.2:10563086-10563105 None:intergenic 40.0%
ACCGGTCTCAAAGTTCAAAA+AGG + chr3.2:10562572-10562591 MS.gene73088:intron 40.0%
ACTTTGCATCATCACTTGCA+AGG - chr3.2:10563674-10563693 None:intergenic 40.0%
AGAATGTTGCAGCTGAATTG+GGG + chr3.2:10563463-10563482 MS.gene73088:CDS 40.0%
CACAGTTCACTCTTATTCCA+TGG - chr3.2:10563491-10563510 None:intergenic 40.0%
CATGTGTCTGTTTGGTTGTA+CGG - chr3.2:10561576-10561595 None:intergenic 40.0%
CTTATTAAACCAGCACAGCA+GGG - chr3.2:10561971-10561990 None:intergenic 40.0%
GAAACATGCTGCTCAATATC+TGG + chr3.2:10563329-10563348 MS.gene73088:CDS 40.0%
GACCCTGTTAATCCTGAATT+TGG - chr3.2:10562686-10562705 None:intergenic 40.0%
GACCTGCAAATATGTTGGAT+TGG - chr3.2:10562128-10562147 None:intergenic 40.0%
GTTATTAGGTAAAGTGGCTG+TGG + chr3.2:10562969-10562988 MS.gene73088:CDS 40.0%
TATTCTTCAGCCGAGAAGTA+GGG + chr3.2:10562102-10562121 MS.gene73088:intron 40.0%
TCAACCTTCAATTCCTTCAC+CGG + chr3.2:10562554-10562573 MS.gene73088:intron 40.0%
TCAAGTGTAGCAAGTTCCTT+AGG + chr3.2:10563384-10563403 MS.gene73088:CDS 40.0%
TGGCTCAGAAATGGTAAATC+TGG - chr3.2:10561829-10561848 None:intergenic 40.0%
TTTGCAGTGTCCAACAAACA+TGG - chr3.2:10561915-10561934 None:intergenic 40.0%
! TGTTTTCATGTTTGGGTGGA+AGG + chr3.2:10561299-10561318 MS.gene73088:intron 40.0%
!! AGCAGAAGTGAAAGCATTGA+TGG - chr3.2:10560763-10560782 None:intergenic 40.0%
!!! GCTGGTTTTCGTTCTTTTGT+TGG + chr3.2:10563585-10563604 MS.gene73088:CDS 40.0%
AACGATGCTTTCTCCGATTC+CGG - chr3.2:10563010-10563029 None:intergenic 45.0%
AAGCCTGTTGCGACACAATA+AGG - chr3.2:10563519-10563538 None:intergenic 45.0%
ACACAAGGCTAAGGTTGGAA+AGG - chr3.2:10561760-10561779 None:intergenic 45.0%
ACATTGCGGATATCAGGACA+CGG - chr3.2:10563249-10563268 None:intergenic 45.0%
AGAGGGGCCAAAATTGATTG+TGG + chr3.2:10561354-10561373 MS.gene73088:intron 45.0%
AGAGTTAACTGCTGACGATG+TGG + chr3.2:10563632-10563651 MS.gene73088:CDS 45.0%
AGTGTAGCAAGTTCCTTAGG+AGG + chr3.2:10563387-10563406 MS.gene73088:CDS 45.0%
ATCACTTGCAAGGAAGAGCA+CGG - chr3.2:10563664-10563683 None:intergenic 45.0%
ATGAGAGAGCCAAGAACACA+AGG - chr3.2:10561775-10561794 None:intergenic 45.0%
ATGCTTGGTTCCACTTCTAG+AGG + chr3.2:10561336-10561355 MS.gene73088:intron 45.0%
ATGTCCACATTGCGGATATC+AGG - chr3.2:10563255-10563274 None:intergenic 45.0%
ATTCGGCACTCTAGACATCA+TGG + chr3.2:10563197-10563216 MS.gene73088:CDS 45.0%
ATTCTGCCATGTCCACATTG+CGG - chr3.2:10563263-10563282 None:intergenic 45.0%
CAAGAACACAAGGCTAAGGT+TGG - chr3.2:10561765-10561784 None:intergenic 45.0%
CTCTGCTATCTATCTCTCTC+AGG + chr3.2:10562947-10562966 MS.gene73088:intron 45.0%
GACATCATGGTCAACAATGC+CGG + chr3.2:10563210-10563229 MS.gene73088:CDS 45.0%
GAGCAGCATGTTTCATTCCA+TGG - chr3.2:10563323-10563342 None:intergenic 45.0%
GCAAGTTCCTTAGGAGGTTT+AGG + chr3.2:10563393-10563412 MS.gene73088:CDS 45.0%
GCTTATTAAACCAGCACAGC+AGG - chr3.2:10561972-10561991 None:intergenic 45.0%
GGAGAGAATCTGATGGTTGA+TGG + chr3.2:10563702-10563721 MS.gene73088:CDS 45.0%
GGCCAATCCAACATATTTGC+AGG + chr3.2:10562123-10562142 MS.gene73088:intron 45.0%
GGGAAAAACGCAAACTTGCA+GGG + chr3.2:10563606-10563625 MS.gene73088:CDS 45.0%
GTATTCTTCAGCCGAGAAGT+AGG + chr3.2:10562101-10562120 MS.gene73088:intron 45.0%
GTCAACAATGCCGGAATTTC+CGG + chr3.2:10563219-10563238 MS.gene73088:CDS 45.0%
GTTTGGGTGGAAGGTTTAGA+AGG + chr3.2:10561308-10561327 MS.gene73088:intron 45.0%
TAGCACCATGGGTATGGAAT+AGG - chr3.2:10563035-10563054 None:intergenic 45.0%
TATCTGGTCCCGAAGAAAAG+TGG + chr3.2:10563345-10563364 MS.gene73088:CDS 45.0%
TCACCTTATTGTGTCGCAAC+AGG + chr3.2:10563513-10563532 MS.gene73088:CDS 45.0%
TCCATCGCTGTCGCTAAATT+CGG + chr3.2:10563180-10563199 MS.gene73088:CDS 45.0%
TGATATCCGCAATGTGGACA+TGG + chr3.2:10563254-10563273 MS.gene73088:CDS 45.0%
TGCTTGGTTCCACTTCTAGA+GGG + chr3.2:10561337-10561356 MS.gene73088:intron 45.0%
TGGGAAAAACGCAAACTTGC+AGG + chr3.2:10563605-10563624 MS.gene73088:CDS 45.0%
TGTCTGTTTGGTTGTACGGT+GGG - chr3.2:10561572-10561591 None:intergenic 45.0%
TTATTGTGTCGCAACAGGCT+TGG + chr3.2:10563518-10563537 MS.gene73088:CDS 45.0%
TTCTCGGCTGAAGAATACAG+AGG - chr3.2:10562099-10562118 None:intergenic 45.0%
TTGGAACCTGTGTATCCATG+CGG - chr3.2:10563420-10563439 None:intergenic 45.0%
TTTCGTCCATTGTGATGTCG+CGG + chr3.2:10563131-10563150 MS.gene73088:CDS 45.0%
!! AATTTTGGCCCCTCTAGAAG+TGG - chr3.2:10561349-10561368 None:intergenic 45.0%
!! CAACCTTAGCCTTGTGTTCT+TGG + chr3.2:10561763-10561782 MS.gene73088:intron 45.0%
!! GAGAATCTGATGGTTGATGG+AGG + chr3.2:10563705-10563724 MS.gene73088:CDS 45.0%
!! TTGAACTTTGAGACCGGTGA+AGG - chr3.2:10562570-10562589 None:intergenic 45.0%
AAAGTGGCTGTGGTAACTGG+TGG + chr3.2:10562979-10562998 MS.gene73088:CDS 50.0%
AAGACGGCGAAGAGTCAATG+AGG + chr3.2:10562069-10562088 MS.gene73088:intron 50.0%
AGGTTCCAAGCATGCTGTGT+GGG + chr3.2:10563431-10563450 MS.gene73088:CDS 50.0%
ATCCAGATCCTAAGGATGGC+TGG - chr3.2:10562269-10562288 None:intergenic 50.0%
ATGCGGTCCTAAACCTCCTA+AGG - chr3.2:10563403-10563422 None:intergenic 50.0%
GAGACCGGTGAAGGAATTGA+AGG - chr3.2:10562561-10562580 None:intergenic 50.0%
GAGCCAAGAACACAAGGCTA+AGG - chr3.2:10561769-10561788 None:intergenic 50.0%
GGTAAAGTGGCTGTGGTAAC+TGG + chr3.2:10562976-10562995 MS.gene73088:CDS 50.0%
GTGTCCTGATATCCGCAATG+TGG + chr3.2:10563248-10563267 MS.gene73088:CDS 50.0%
GTGTCTGTTTGGTTGTACGG+TGG - chr3.2:10561573-10561592 None:intergenic 50.0%
GTTCGCCTATTCCATACCCA+TGG + chr3.2:10563027-10563046 MS.gene73088:CDS 50.0%
TAACAGGGTCCCTTTCCCAT+GGG + chr3.2:10562696-10562715 MS.gene73088:intron 50.0%
TAATCCCCACACAGCATGCT+TGG - chr3.2:10563439-10563458 None:intergenic 50.0%
TACCAGCCATCCTTAGGATC+TGG + chr3.2:10562264-10562283 MS.gene73088:intron 50.0%
TCACTTCTGCTCCAGCACAA+AGG + chr3.2:10560772-10560791 MS.gene73088:CDS 50.0%
TCCAAGGTCGTCTTGGACAT+CGG - chr3.2:10563070-10563089 None:intergenic 50.0%
TCCTCAGTTCTCTCATCCTC+AGG - chr3.2:10563558-10563577 None:intergenic 50.0%
TGAGAGAACTGAGGATGCCA+TGG + chr3.2:10563563-10563582 MS.gene73088:CDS 50.0%
TGATGCTACCAGCCATCCTT+AGG + chr3.2:10562258-10562277 MS.gene73088:intron 50.0%
TTAACAGGGTCCCTTTCCCA+TGG + chr3.2:10562695-10562714 MS.gene73088:intron 50.0%
TTAGGACCGCATGGATACAC+AGG + chr3.2:10563411-10563430 MS.gene73088:CDS 50.0%
! GCTTGGTTCCACTTCTAGAG+GGG + chr3.2:10561338-10561357 MS.gene73088:intron 50.0%
! TTAGGAGGTTTAGGACCGCA+TGG + chr3.2:10563402-10563421 MS.gene73088:CDS 50.0%
!! GTTGGATTGGCCCTACTTCT+CGG - chr3.2:10562115-10562134 None:intergenic 50.0%
ACACGGTGCTCCGGAAATTC+CGG - chr3.2:10563232-10563251 None:intergenic 55.0%
AGAACTGAGGATGCCATGGC+TGG + chr3.2:10563567-10563586 MS.gene73088:CDS 55.0%
CAGGTTCCAAGCATGCTGTG+TGG + chr3.2:10563430-10563449 MS.gene73088:CDS 55.0%
CCATTGTGATGTCGCGGTAG+AGG + chr3.2:10563137-10563156 MS.gene73088:CDS 55.0%
CCTCTACCGCGACATCACAA+TGG - chr3.2:10563140-10563159 None:intergenic 55.0%
CTTAACCCTCCGGTTCCCAT+GGG - chr3.2:10562714-10562733 None:intergenic 55.0%
GACAGCGATGGATACTGCAG+TGG - chr3.2:10563172-10563191 None:intergenic 55.0%
GATATCAGGACACGGTGCTC+CGG - chr3.2:10563241-10563260 None:intergenic 55.0%
GATGCTTTCTCCGATTCCGG+AGG - chr3.2:10563007-10563026 None:intergenic 55.0%
GCAGCTGAATTGGGGAACCA+TGG + chr3.2:10563471-10563490 MS.gene73088:CDS 55.0%
GCCGAATTTAGCGACAGCGA+TGG - chr3.2:10563184-10563203 None:intergenic 55.0%
GCCTGAGGATGAGAGAACTG+AGG + chr3.2:10563554-10563573 MS.gene73088:CDS 55.0%
GCTTCTGTCCAAGGTCGTCT+TGG - chr3.2:10563077-10563096 None:intergenic 55.0%
GGTTCCAAGCATGCTGTGTG+GGG + chr3.2:10563432-10563451 MS.gene73088:CDS 55.0%
TCTTAACCCTCCGGTTCCCA+TGG - chr3.2:10562715-10562734 None:intergenic 55.0%
TGTCGCAACAGGCTTGGCTT+TGG + chr3.2:10563524-10563543 MS.gene73088:CDS 55.0%
! GGCTTTGGCTCATTTGCCTG+AGG + chr3.2:10563539-10563558 MS.gene73088:CDS 55.0%
!! AGTTTGTTGCCCTGCTGTGC+TGG + chr3.2:10561959-10561978 MS.gene73088:intron 55.0%
ACTGGTGGAGCCTCCGGAAT+CGG + chr3.2:10562994-10563013 MS.gene73088:CDS 60.0%
CCTCCGGTTCCCATGGGAAA+GGG - chr3.2:10562708-10562727 None:intergenic 60.0%
CCTTTCCCATGGGAACCGGA+GGG + chr3.2:10562706-10562725 MS.gene73088:intron 60.0%
GCCGATGTCCAAGACGACCT+TGG + chr3.2:10563066-10563085 MS.gene73088:CDS 60.0%
GGTCCCTTTCCCATGGGAAC+CGG + chr3.2:10562702-10562721 MS.gene73088:intron 60.0%
GTGGTAACTGGTGGAGCCTC+CGG + chr3.2:10562988-10563007 MS.gene73088:CDS 60.0%
CCCTCCGGTTCCCATGGGAA+AGG - chr3.2:10562709-10562728 None:intergenic 65.0%
CCCTTTCCCATGGGAACCGG+AGG + chr3.2:10562705-10562724 MS.gene73088:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 10560750 10563767 10560750 ID=MS.gene73088
chr3.2 mRNA 10560750 10563767 10560750 ID=MS.gene73088.t1;Parent=MS.gene73088
chr3.2 exon 10560750 10560793 10560750 ID=MS.gene73088.t1.exon1;Parent=MS.gene73088.t1
chr3.2 CDS 10560750 10560793 10560750 ID=cds.MS.gene73088.t1;Parent=MS.gene73088.t1
chr3.2 exon 10562969 10563767 10562969 ID=MS.gene73088.t1.exon2;Parent=MS.gene73088.t1
chr3.2 CDS 10562969 10563767 10562969 ID=cds.MS.gene73088.t1;Parent=MS.gene73088.t1
Gene Sequence

>MS.gene73088

ATGTCAACTGCCATCAATGCTTTCACTTCTGCTCCAGCACAAAGGTACATTAATAATTATTCTCTGAGTTTTGAATCTATTTCATACATGCAAATTCTTAGCAAGACTTTTTTTGGTATAGTTTGAGCTTCTGTTTTTATTTATTTATTTTCTTAAGAAAATATCTCATCAATTTTTTTGTCAGCTTTTGACATGATAACTGTGTGTTGACTAAGTTTGTCCGTTTAATTATTATTGATCTTAACAAATAAGAGATCTGCTGAGGTTATTTGAATTCTTCAAGTTGTTGACTTGATGGTTATATTTTTACAAATTGAATTGATCTTGTTTGAATTTGAACTTCTTTTTTTTTTCTTCTTAACAACAATATATAAAACATATATTGTTTGAACTTATTTGACTTATTTTTCTTAACAGCAATATATAAAAACAAATATTGTTTTTAGAAATTGATCAGATATTCATTCTTCTCTCAATGCTAGTTTAGTCTTAGATCTAAAATAATGTTTATTGATCATAAAATAATATGGGTTCAAATTGTTTTATGATTGTTTTCATGTTTGGGTGGAAGGTTTAGAAGGACTATATGCTTGGTTCCACTTCTAGAGGGGCCAAAATTGATTGTGGATGTGTAGAATTGATTATGACATATTTGGTTTCTGTCGATTAAATCGATCTGGCTCCACATTCTACTTATAGTTAAGATTTGTAGTTATTGATTATAGAATTGATTTTCACACACATTTTATTTTTACATGAAGGTATCCAAAAACACAAACCACTTTTAGTCGGAGTTACTTTTAATCAAAATCAATTCTTCCCACCGTACAACCAAACAGACACATGTCTATATTTTGGTATATATTTGAGATTCGAAAAAATTGAAAGAAAAATGTGATAGATGATCATATAACATTTTAGCCGCACTTAATTTATTTTAAAGCATTTTTAATTTTACTTGACAAAAGAAAAAAAACTTCTTTATTTTAGAAAAGAGAAAAAAATGTCCTTTCCAACCTTAGCCTTGTGTTCTTGGCTCTCTCATTTTCCCCCAAATTATGTGATTTCTATGGATTCCAGATTTACCATTTCTGAGCCAAAATTCAAATTGCTTCATAATGAGTTTGGTTATATAATTTGAGGATTTTTCCCGATTTCTCAACCATGTTTGTTGGACACTGCAAATTTACAGTACTTGTTAAGAATCTTAGTTTGTTGCCCTGCTGTGCTGGTTTAATAAGCATTGAAGATACTAAAATCAAACGGAAGAGAGAGCAAAAGTAAATAGAGATTGACAAGTTATGTTTAACTTTCATAATAAGACGGCGAAGAGTCAATGAGGTTATCCTCTGTATTCTTCAGCCGAGAAGTAGGGCCAATCCAACATATTTGCAGGTCTAAAGCGAACCATAGTTTTAAATCTGGTGTAGGACTTTCACAGTGCAATTTTTATATTTTCACTAGTCTTCTTGTATTTAGATGAGTTTGGCATGAAAAAAATTATGGTATGATGCTACCAGCCATCCTTAGGATCTGGATGTTTTGAATCTGCTGATCCTGCACCAACATATAAAAACTGTCATGCTTGTATGATGTATTGTTTGAATGGTCAATGACATTGAAAGCAAAGACTAAAGAGTGATTAATCTCGTTCAAGAAACTGAAGCTAGTTAGATAAAATTTGTTCTACATTATTGCTTGCCCTATAATTTTGAAAAGATAATATTTGGTTATTAAGCTATGTATTTCTCAGATATGGTTTTGAATTTTATATCTAATTTGCTACTAATAGTATGAGGTTTCTTCAACCTTCAATTCCTTCACCGGTCTCAAAGTTCAAAAAGGATAATTTAATGAAGGTTGAATCGATCGGGAGTATCTAAGTTTAGACTATGACTGAAACAATCCTTAGCTAGAATTTACTTACCTTTGACCAAATTCAGGATTAACAGGGTCCCTTTCCCATGGGAACCGGAGGGTTAAGACAAAAAAGTATGTGAAAACACCGTCTTTTACAAGTGAAAAAGATCTAGAAATATTTAGCTGTTTTCTTTCCATTTCACTGATTTCTGAATTTTGGATTCTGGTTTTGGTCATGTTTATCTGTGACATAATGACACATTCTATAATATAATGTTTTCTTTAAGTTTTCAATTATTGTTAACCACTCAGTATTTTAATAATTTGACTTATCGTTCTCTGCTATCTATCTCTCTCAGGTTATTAGGTAAAGTGGCTGTGGTAACTGGTGGAGCCTCCGGAATCGGAGAAAGCATCGTTCGCCTATTCCATACCCATGGTGCTAAAGTTTGTATAGCCGATGTCCAAGACGACCTTGGACAGAAGCTCTTTGATTCCTTAAGTGATCCGGAAAATGTTTTTTTCGTCCATTGTGATGTCGCGGTAGAGGCTGATGTCTCCACTGCAGTATCCATCGCTGTCGCTAAATTCGGCACTCTAGACATCATGGTCAACAATGCCGGAATTTCCGGAGCACCGTGTCCTGATATCCGCAATGTGGACATGGCAGAATTCGACAAAGTATTTAACATAAATGTAAAGGGAGTTTTCCATGGAATGAAACATGCTGCTCAATATCTGGTCCCGAAGAAAAGTGGCTCAATAATTTCTATATCAAGTGTAGCAAGTTCCTTAGGAGGTTTAGGACCGCATGGATACACAGGTTCCAAGCATGCTGTGTGGGGATTAACAAAGAATGTTGCAGCTGAATTGGGGAACCATGGAATAAGAGTGAACTGTGTGTCACCTTATTGTGTCGCAACAGGCTTGGCTTTGGCTCATTTGCCTGAGGATGAGAGAACTGAGGATGCCATGGCTGGTTTTCGTTCTTTTGTTGGGAAAAACGCAAACTTGCAGGGCGTAGAGTTAACTGCTGACGATGTGGCTAATTCCGTGCTCTTCCTTGCAAGTGATGATGCAAAGTATATAAGTGGAGAGAATCTGATGGTTGATGGAGGATTCACTAGATCTAATCACTCACTCAAAGTTTTTAGATGA
Protein sequence

>MS.gene73088.t1

MSTAINAFTSAPAQRLLGKVAVVTGGASGIGESIVRLFHTHGAKVCIADVQDDLGQKLFDSLSDPENVFFVHCDVAVEADVSTAVSIAVAKFGTLDIMVNNAGISGAPCPDIRNVDMAEFDKVFNINVKGVFHGMKHAAQYLVPKKSGSIISISSVASSLGGLGPHGYTGSKHAVWGLTKNVAAELGNHGIRVNCVSPYCVATGLALAHLPEDERTEDAMAGFRSFVGKNANLQGVELTADDVANSVLFLASDDAKYISGENLMVDGGFTRSNHSLKVFR