AlfalfaGEDB | MS.gene07097

M. sativa cultivar XinJiangDaYe / MS.gene07097

KEGG: -
GO: -
PFAM: PF13561.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07097.t1	XP_003626027.2	98.5	264	4	0	1	264	2	265	7.30E-140	506.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07097.t1	Q94K41	66.0	253	86	0	3	255	4	256	3.2e-91	336.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07097.t1	A0A396H746	98.5	264	4	0	1	264	2	265	5.3e-140	506.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050720	MS.gene07097	0.80393	2.76E-49	-1.69E-46
MS.gene050809	MS.gene07097	0.80435	2.25E-49	-1.69E-46
MS.gene050868	MS.gene07097	-0.809882	1.52E-50	-1.69E-46
MS.gene050871	MS.gene07097	-0.810189	1.30E-50	-1.69E-46
MS.gene051044	MS.gene07097	0.823207	1.57E-53	-1.69E-46
MS.gene05104	MS.gene07097	0.824872	6.38E-54	-1.69E-46
MS.gene052015	MS.gene07097	0.8055	1.30E-49	-1.69E-46
MS.gene052494	MS.gene07097	0.819361	1.21E-52	-1.69E-46
MS.gene054707	MS.gene07097	0.810036	1.41E-50	-1.69E-46
MS.gene05589	MS.gene07097	-0.804779	1.83E-49	-1.69E-46
MS.gene058171	MS.gene07097	0.801874	7.33E-49	-1.69E-46
MS.gene058175	MS.gene07097	0.806036	9.99E-50	-1.69E-46
MS.gene05837	MS.gene07097	-0.803544	3.31E-49	-1.69E-46
MS.gene058416	MS.gene07097	0.809283	2.04E-50	-1.69E-46
MS.gene05960	MS.gene07097	0.826942	2.06E-54	-1.69E-46
MS.gene059699	MS.gene07097	0.811301	7.50E-51	-1.69E-46
MS.gene059703	MS.gene07097	0.819451	1.15E-52	-1.69E-46
MS.gene061044	MS.gene07097	0.802967	4.36E-49	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene006999	MS.gene07097	PPI
MS.gene021164	MS.gene07097	PPI
MS.gene008160	MS.gene07097	PPI
MS.gene73824	MS.gene07097	PPI
MS.gene95020	MS.gene07097	PPI
MS.gene050862	MS.gene07097	PPI
MS.gene63483	MS.gene07097	PPI
MS.gene04700	MS.gene07097	PPI
MS.gene065380	MS.gene07097	PPI
MS.gene42856	MS.gene07097	PPI
MS.gene07097	MS.gene50524	PPI
MS.gene055846	MS.gene07097	PPI
MS.gene050431	MS.gene07097	PPI
MS.gene050131	MS.gene07097	PPI
MS.gene63403	MS.gene07097	PPI
MS.gene019786	MS.gene07097	PPI
MS.gene043387	MS.gene07097	PPI
MS.gene25667	MS.gene07097	PPI
MS.gene066728	MS.gene07097	PPI
MS.gene85724	MS.gene07097	PPI
MS.gene31507	MS.gene07097	PPI
MS.gene41122	MS.gene07097	PPI
MS.gene08695	MS.gene07097	PPI
MS.gene63306	MS.gene07097	PPI
MS.gene07097	MS.gene04700	PPI
MS.gene62187	MS.gene07097	PPI
MS.gene63308	MS.gene07097	PPI
MS.gene07097	MS.gene08695	PPI
MS.gene80360	MS.gene07097	PPI
MS.gene024269	MS.gene07097	PPI
MS.gene033685	MS.gene07097	PPI
MS.gene056029	MS.gene07097	PPI
MS.gene008153	MS.gene07097	PPI
MS.gene23019	MS.gene07097	PPI
MS.gene014425	MS.gene07097	PPI
MS.gene63482	MS.gene07097	PPI
MS.gene045581	MS.gene07097	PPI
MS.gene07097	MS.gene039828	PPI
MS.gene007002	MS.gene07097	PPI
MS.gene018066	MS.gene07097	PPI
MS.gene28848	MS.gene07097	PPI
MS.gene87026	MS.gene07097	PPI
MS.gene68956	MS.gene07097	PPI
MS.gene07097	MS.gene072462	PPI
MS.gene07097	MS.gene30551	PPI
MS.gene003925	MS.gene07097	PPI
MS.gene62193	MS.gene07097	PPI
MS.gene29327	MS.gene07097	PPI
MS.gene73088	MS.gene07097	PPI
MS.gene073684	MS.gene07097	PPI
MS.gene056339	MS.gene07097	PPI
MS.gene07096	MS.gene07097	PPI
MS.gene54952	MS.gene07097	PPI
MS.gene031693	MS.gene07097	PPI
MS.gene62195	MS.gene07097	PPI
MS.gene050432	MS.gene07097	PPI
MS.gene68880	MS.gene07097	PPI
MS.gene042142	MS.gene07097	PPI
MS.gene25674	MS.gene07097	PPI
MS.gene012794	MS.gene07097	PPI
MS.gene007006	MS.gene07097	PPI
MS.gene072664	MS.gene07097	PPI
MS.gene28847	MS.gene07097	PPI
MS.gene62194	MS.gene07097	PPI
MS.gene63307	MS.gene07097	PPI
MS.gene07097	MS.gene003992	PPI
MS.gene87780	MS.gene07097	PPI
MS.gene044694	MS.gene07097	PPI
MS.gene006617	MS.gene07097	PPI
MS.gene07097	MS.gene055846	PPI
MS.gene54598	MS.gene07097	PPI
MS.gene008162	MS.gene07097	PPI
MS.gene028938	MS.gene07097	PPI
MS.gene03319	MS.gene07097	PPI
MS.gene50524	MS.gene07097	PPI
MS.gene42260	MS.gene07097	PPI
MS.gene08694	MS.gene07097	PPI
MS.gene07097	MS.gene003729	PPI
MS.gene064756	MS.gene07097	PPI
MS.gene003926	MS.gene07097	PPI
MS.gene52742	MS.gene07097	PPI
MS.gene07097	MS.gene43481	PPI
MS.gene52743	MS.gene07097	PPI
MS.gene008161	MS.gene07097	PPI
MS.gene07097	MS.gene44088	PPI
MS.gene50522	MS.gene07097	PPI
MS.gene08756	MS.gene07097	PPI
MS.gene007678	MS.gene07097	PPI
MS.gene63484	MS.gene07097	PPI
MS.gene055565	MS.gene07097	PPI
MS.gene07097	MS.gene31507	PPI
MS.gene012681	MS.gene07097	PPI
MS.gene005221	MS.gene07097	PPI
MS.gene63300	MS.gene07097	PPI
MS.gene42114	MS.gene07097	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07097.t1	MTR_7g110140	98.099	263	5	0	2	264	3	265	0.0	519
MS.gene07097.t1	MTR_6g035395	72.656	256	57	1	1	256	1	243	1.28e-131	372
MS.gene07097.t1	MTR_2g090165	68.726	259	80	1	2	259	3	261	5.97e-128	363
MS.gene07097.t1	MTR_7g110130	68.966	261	80	1	2	261	3	263	8.22e-128	363
MS.gene07097.t1	MTR_7g110160	64.427	253	72	1	2	254	3	237	2.03e-109	316
MS.gene07097.t1	MTR_6g023590	50.996	251	121	2	4	252	12	262	1.49e-86	259
MS.gene07097.t1	MTR_6g023950	50.988	253	122	2	4	254	12	264	2.02e-83	251
MS.gene07097.t1	MTR_6g023990	49.402	251	125	2	4	252	13	263	3.65e-79	240
MS.gene07097.t1	MTR_6g023600	49.004	251	126	2	4	252	12	262	4.85e-79	239
MS.gene07097.t1	MTR_6g023610	50.400	250	122	2	4	251	12	261	1.74e-77	236
MS.gene07097.t1	MTR_4g052350	49.804	255	123	3	3	256	12	262	1.38e-76	233
MS.gene07097.t1	MTR_4g052340	49.804	255	123	3	3	256	12	262	2.09e-76	233
MS.gene07097.t1	MTR_4g052320	48.425	254	127	3	4	256	7	257	9.65e-76	231
MS.gene07097.t1	MTR_7g105460	48.221	253	129	2	4	255	12	263	1.46e-75	231
MS.gene07097.t1	MTR_7g071680	46.715	274	124	4	3	256	27	298	1.56e-75	232
MS.gene07097.t1	MTR_6g023600	48.606	251	121	3	4	252	12	256	1.59e-75	230
MS.gene07097.t1	MTR_6g023910	48.000	250	128	2	4	251	12	261	1.24e-73	226
MS.gene07097.t1	MTR_4g052300	48.031	254	127	3	4	256	7	256	1.68e-72	223
MS.gene07097.t1	MTR_7g083870	47.015	268	133	4	3	263	33	298	3.58e-71	221
MS.gene07097.t1	MTR_7g107670	43.446	267	143	4	3	263	31	295	2.19e-66	208
MS.gene07097.t1	MTR_3g020670	48.263	259	123	5	3	252	14	270	9.50e-64	201
MS.gene07097.t1	MTR_4g078630	46.718	259	125	5	3	252	17	271	6.16e-63	199
MS.gene07097.t1	MTR_7g105580	46.000	250	117	3	3	252	6	237	3.04e-62	196
MS.gene07097.t1	MTR_7g105590	47.027	185	96	2	3	186	6	189	4.05e-50	163
MS.gene07097.t1	MTR_7g105570	38.645	251	101	3	5	254	21	219	1.87e-45	152
MS.gene07097.t1	MTR_3g113870	42.857	182	101	3	13	193	29	208	1.78e-42	145
MS.gene07097.t1	MTR_4g084800	47.518	141	73	1	1	140	9	149	5.67e-39	133
MS.gene07097.t1	MTR_4g058840	30.798	263	153	5	5	250	11	261	1.79e-23	96.7
MS.gene07097.t1	MTR_4g058820	30.798	263	153	5	5	250	11	261	1.79e-23	96.7
MS.gene07097.t1	MTR_1g051165	27.757	263	176	5	3	253	12	272	6.67e-21	89.7
MS.gene07097.t1	MTR_7g113650	29.961	257	163	6	4	250	39	288	6.93e-21	89.7
MS.gene07097.t1	MTR_3g085740	29.572	257	162	9	3	251	73	318	1.13e-20	89.7
MS.gene07097.t1	MTR_4g058810	35.450	189	115	3	5	186	11	199	6.69e-20	86.7
MS.gene07097.t1	MTR_1g082760	28.897	263	158	6	4	250	39	288	4.97e-19	84.7
MS.gene07097.t1	MTR_4g132850	30.712	267	148	9	1	251	3	248	8.13e-18	80.9
MS.gene07097.t1	MTR_4g131740	27.652	264	167	8	4	253	39	292	1.64e-17	80.5
MS.gene07097.t1	MTR_6g023940	29.648	199	66	5	4	195	12	143	2.68e-17	77.0
MS.gene07097.t1	MTR_4g097510	31.217	189	126	4	6	193	3	188	6.27e-17	79.0
MS.gene07097.t1	MTR_1196s0010	30.435	253	155	9	6	251	275	513	2.55e-16	78.6
MS.gene07097.t1	MTR_8g096580	33.005	203	129	4	3	201	43	242	1.80e-15	75.1
MS.gene07097.t1	MTR_8g442750	30.916	262	164	9	5	255	14	269	3.51e-15	74.3
MS.gene07097.t1	MTR_3g068085	29.344	259	173	9	5	259	15	267	3.53e-15	73.9
MS.gene07097.t1	MTR_3g068070	28.906	256	172	8	2	253	12	261	4.92e-15	73.2
MS.gene07097.t1	MTR_7g094520	29.297	256	165	7	5	251	11	259	7.98e-15	72.8
MS.gene07097.t1	MTR_7g105560	58.621	58	24	0	1	58	9	66	2.00e-14	69.3
MS.gene07097.t1	MTR_4g064887	27.799	259	171	9	2	253	12	261	1.05e-13	69.7
MS.gene07097.t1	MTR_3g087850	30.939	181	115	5	9	186	30	203	2.80e-13	68.6
MS.gene07097.t1	MTR_7g094510	27.559	254	172	7	5	251	6	254	2.91e-13	68.2
MS.gene07097.t1	MTR_3g068065	26.744	258	181	6	5	259	17	269	1.14e-12	66.6
MS.gene07097.t1	MTR_3g087860	30.939	181	113	6	27	202	34	207	4.25e-12	65.1
MS.gene07097.t1	MTR_7g063360	27.799	259	175	9	2	253	13	266	6.18e-12	64.3
MS.gene07097.t1	MTR_4g086400	28.205	195	122	4	7	186	6	197	6.59e-12	65.5
MS.gene07097.t1	MTR_4g066050	29.730	222	137	8	8	216	27	242	1.30e-11	63.5
MS.gene07097.t1	MTR_7g063270	28.016	257	174	7	2	252	13	264	1.75e-11	63.2

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene07097.t1	AT2G47140	66.008	253	86	0	3	255	4	256	7.90e-122	348
MS.gene07097.t1	AT3G29250	62.451	253	93	2	4	255	5	256	5.40e-111	320
MS.gene07097.t1	AT3G29250	61.719	256	96	2	1	255	40	294	6.60e-111	322
MS.gene07097.t1	AT3G29250	62.451	253	93	2	4	255	41	292	1.80e-110	320
MS.gene07097.t1	AT3G29260	62.403	258	94	2	3	259	4	259	2.27e-109	317
MS.gene07097.t1	AT2G47130	60.938	256	91	2	4	255	5	255	8.96e-107	310
MS.gene07097.t1	AT2G47120	57.031	256	106	3	4	259	5	256	4.51e-100	293
MS.gene07097.t1	AT2G47120	57.031	256	106	3	4	259	6	257	5.09e-100	293
MS.gene07097.t1	AT3G51680	48.519	270	123	3	3	256	30	299	2.80e-76	234
MS.gene07097.t1	AT3G26760	42.007	269	143	5	3	260	34	300	2.02e-63	201
MS.gene07097.t1	AT1G52340	46.067	267	130	6	3	257	16	280	2.52e-63	200
MS.gene07097.t1	AT3G26770	41.379	261	142	5	3	255	39	296	2.82e-61	196
MS.gene07097.t1	AT4G03140	42.322	267	146	4	3	263	76	340	1.04e-60	195
MS.gene07097.t1	AT3G42960	44.280	271	133	5	3	264	6	267	1.32e-54	177
MS.gene07097.t1	AT2G47150	38.247	251	102	5	5	255	1	198	1.32e-43	147
MS.gene07097.t1	AT2G17845	30.147	272	154	8	5	254	47	304	4.24e-20	88.2
MS.gene07097.t1	AT3G55290	30.189	265	152	8	5	250	18	268	3.89e-19	85.1
MS.gene07097.t1	AT3G55290	30.189	265	152	8	5	250	17	267	4.07e-19	84.7
MS.gene07097.t1	AT2G29150	32.061	262	155	10	2	253	13	261	1.25e-18	83.2
MS.gene07097.t1	AT2G29360	30.769	260	162	10	2	253	13	262	1.27e-18	83.2
MS.gene07097.t1	AT1G62610	28.077	260	165	6	5	250	19	270	1.40e-17	80.5
MS.gene07097.t1	AT1G62610	28.077	260	165	6	5	250	13	264	1.45e-17	80.5
MS.gene07097.t1	AT1G62610	28.077	260	165	6	5	250	15	266	1.49e-17	80.5
MS.gene07097.t1	AT1G62610	28.077	260	165	6	5	250	14	265	1.51e-17	80.5
MS.gene07097.t1	AT2G29340	30.451	266	175	8	2	264	4	262	1.81e-17	80.1
MS.gene07097.t1	AT2G29340	30.588	255	169	7	2	253	4	253	2.65e-17	80.1
MS.gene07097.t1	AT1G24360	26.744	258	172	8	3	253	72	319	3.25e-17	80.1
MS.gene07097.t1	AT3G55310	29.434	265	154	8	5	250	17	267	4.57e-17	79.3
MS.gene07097.t1	AT3G46170	30.116	259	160	8	5	250	26	276	8.16e-17	78.6
MS.gene07097.t1	AT1G63380	29.615	260	161	9	5	250	19	270	1.29e-16	78.2
MS.gene07097.t1	AT1G63380	29.615	260	161	9	5	250	17	268	1.38e-16	77.8
MS.gene07097.t1	AT1G63380	29.615	260	161	9	5	250	15	266	1.58e-16	77.8
MS.gene07097.t1	AT1G63380	29.615	260	161	9	5	250	22	273	1.91e-16	77.4
MS.gene07097.t1	AT1G54870	29.457	258	163	7	4	250	81	330	8.82e-16	76.3
MS.gene07097.t1	AT1G54870	29.457	258	163	7	4	250	83	332	9.31e-16	76.3
MS.gene07097.t1	AT2G29370	29.615	260	165	10	2	253	13	262	1.13e-15	75.1
MS.gene07097.t1	AT3G05260	29.545	264	160	9	4	253	36	287	2.12e-15	74.7
MS.gene07097.t1	AT1G07450	28.627	255	173	7	2	253	5	253	2.62e-15	73.9
MS.gene07097.t1	AT2G29290	30.000	260	164	10	2	253	4	253	6.24e-15	73.2
MS.gene07097.t1	AT1G07440	28.516	256	172	6	2	253	9	257	8.91e-15	72.8
MS.gene07097.t1	AT2G30670	27.344	256	176	6	2	253	4	253	1.78e-14	71.6
MS.gene07097.t1	AT2G29310	28.016	257	173	7	2	253	4	253	2.52e-14	71.2
MS.gene07097.t1	AT5G65205	30.526	190	120	6	6	191	7	188	3.49e-14	71.2
MS.gene07097.t1	AT4G05530	28.679	265	156	8	1	251	5	250	3.59e-14	70.9
MS.gene07097.t1	AT2G29350	29.231	260	165	10	2	253	12	260	6.41e-14	70.1
MS.gene07097.t1	AT5G18210	29.457	258	165	8	5	251	8	259	8.43e-14	69.7
MS.gene07097.t1	AT5G06060	28.958	259	168	9	2	253	6	255	2.80e-13	68.6
MS.gene07097.t1	AT5G10050	28.947	190	123	6	6	191	6	187	3.49e-13	68.2
MS.gene07097.t1	AT2G29340	30.102	196	132	5	2	194	4	197	1.28e-12	65.5
MS.gene07097.t1	AT2G29340	30.102	196	132	5	2	194	4	197	1.28e-12	65.5
MS.gene07097.t1	AT1G10310	29.843	191	129	4	8	195	18	206	1.64e-12	65.9
MS.gene07097.t1	AT5G50600	26.000	250	160	8	3	231	43	288	2.61e-12	66.2
MS.gene07097.t1	AT5G50700	26.000	250	160	8	3	231	43	288	2.61e-12	66.2
MS.gene07097.t1	AT3G04000	29.545	264	160	10	5	250	14	269	2.87e-12	65.5
MS.gene07097.t1	AT3G12800	27.239	268	175	10	5	258	10	271	9.04e-12	64.3
MS.gene07097.t1	AT5G50770	30.526	190	124	5	1	186	41	226	1.15e-11	64.3
MS.gene07097.t1	AT4G20760	29.319	191	114	7	5	175	61	250	1.29e-11	63.9
MS.gene07097.t1	AT4G20760	29.319	191	114	7	5	175	41	230	1.44e-11	63.9
MS.gene07097.t1	AT4G13180	27.099	262	167	8	5	253	13	263	7.63e-11	61.2

Find 49 sgRNAs with CRISPR-Local

Find 58 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTGAAATTGTTTGCCGAAAA+TGG	0.162832	7.2:+6340093	MS.gene07097:CDS
TTTAGTAATGCAGGAATAAT+AGG	0.245500	7.2:+6340282	MS.gene07097:CDS
GTTAATAGTATATCCCCTTT+TGG	0.296854	7.2:+6340564	MS.gene07097:CDS
TGTGGAGAACTTGGTGGTTA+TGG	0.318822	7.2:+6340534	MS.gene07097:CDS
AGTAGACATTCAAGATGAAT+TGG	0.321657	7.2:+6340131	MS.gene07097:CDS
GAATGAATTTGAGAAAACTA+TGG	0.325001	7.2:+6340335	MS.gene07097:CDS
GGAATAATAGGCTCTTTATC+TGG	0.363048	7.2:+6340294	MS.gene07097:CDS
ATGCAATTGGTCTACATATC+AGG	0.373432	7.2:-6340807	None:intergenic
TTTGAAGGGTATTGTGTTGA+AGG	0.381455	7.2:+6340665	MS.gene07097:CDS
TTTGATGTAGTATAACCATT+AGG	0.390831	7.2:-6340480	None:intergenic
ACAGGTGCAGCCAGTGGAAT+TGG	0.391122	7.2:+6340060	MS.gene07097:CDS
CATATCATCATTGTGATGTC+AGG	0.396278	7.2:+6340193	MS.gene07097:CDS
ACTAGCGTTGCAGCTTCTAT+TGG	0.399254	7.2:+6340447	MS.gene07097:CDS
GGTCATAACTTGGTTGTTGA+TGG	0.406627	7.2:+6340747	MS.gene07097:CDS
ATTGGTGGAACAGGTCCTAA+TGG	0.415583	7.2:+6340465	MS.gene07097:CDS
AAAATCTAGGTTGGAGGGTA+AGG	0.417028	7.2:+6340026	MS.gene07097:intron
GCAGCTTCTATTGGTGGAAC+AGG	0.426744	7.2:+6340456	MS.gene07097:CDS
CGTAAAGTTGCAGATTCAAT+AGG	0.430870	7.2:+6340156	MS.gene07097:CDS
AGAGGTGTTGCAACTCCAAA+AGG	0.435975	7.2:-6340579	None:intergenic
TAGTTCTCATGCTAATTTGA+AGG	0.456961	7.2:+6340650	MS.gene07097:CDS
TTATATCAGTGGTCATAACT+TGG	0.462346	7.2:+6340737	MS.gene07097:CDS
GGTAAGGTGGCAATAATAAC+AGG	0.465773	7.2:+6340042	MS.gene07097:CDS
AGAAACAATTCATTTCACTT+TGG	0.465833	7.2:+6340233	MS.gene07097:CDS
TGTTTCTTCACCAATTCCAC+TGG	0.482489	7.2:-6340070	None:intergenic
TAAGCATGCTGCGCGCGCCA+TGG	0.496972	7.2:+6340389	MS.gene07097:CDS
GTAGACATTCAAGATGAATT+GGG	0.506313	7.2:+6340132	MS.gene07097:CDS
AGCGTTGCAGCTTCTATTGG+TGG	0.515248	7.2:+6340450	MS.gene07097:CDS
TACATATCAGGCGTTGCAGA+TGG	0.522877	7.2:-6340795	None:intergenic
AAATCAGCTTGTGGAGAACT+TGG	0.524096	7.2:+6340525	MS.gene07097:CDS
AGTTCTCATGCTAATTTGAA+GGG	0.524264	7.2:+6340651	MS.gene07097:CDS
CATAACTTGGTTGTTGATGG+TGG	0.529539	7.2:+6340750	MS.gene07097:CDS
GAGGTGTTGCAACTCCAAAA+GGG	0.538111	7.2:-6340578	None:intergenic
ACTATGGCTACAAATGTTGT+TGG	0.550336	7.2:+6340351	MS.gene07097:CDS
TATGACAAAATCTAGGTTGG+AGG	0.554009	7.2:+6340020	MS.gene07097:intron
ATATCATCATTGTGATGTCA+GGG	0.558680	7.2:+6340194	MS.gene07097:CDS
GATGAAGCTGTTTATATCAG+TGG	0.560159	7.2:+6340726	MS.gene07097:CDS
ATGACAAAATCTAGGTTGGA+GGG	0.562378	7.2:+6340021	MS.gene07097:intron
GGACTTGTGAAATCAGCTTG+TGG	0.562826	7.2:+6340516	MS.gene07097:CDS
TTGTAAGCTATACACGAAAG+AGG	0.567482	7.2:-6340597	None:intergenic
TCAGCTTGTGGAGAACTTGG+TGG	0.578232	7.2:+6340528	MS.gene07097:CDS
ATCTAGGTTGGAGGGTAAGG+TGG	0.582293	7.2:+6340029	MS.gene07097:intron
GCATGCTGCGCGCGCCATGG+TGG	0.599712	7.2:+6340392	MS.gene07097:CDS
CATTATCAATGATGAAGCAA+AGG	0.601500	7.2:+6339884	None:intergenic
CTACTAGATTCAACTTCATG+AGG	0.605548	7.2:-6340627	None:intergenic
AGGTGTTGCAACTCCAAAAG+GGG	0.641177	7.2:-6340577	None:intergenic
ATAATAACAGGTGCAGCCAG+TGG	0.644904	7.2:+6340054	MS.gene07097:CDS
TAGTGCATATAATCGATCCA+CGG	0.666748	7.2:-6340425	None:intergenic
TGTTGATGGTGGTTTCTCCG+TGG	0.694935	7.2:+6340761	MS.gene07097:CDS
AGATGGAGTATTACGAACCA+CGG	0.715903	7.2:-6340778	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATATATTATGACAAAATCT+AGG	+	chr7.2:6340013-6340032	MS.gene07097:intron	15.0%
!!	ACATATATATATCAAACTAT+AGG	-	chr7.2:6339913-6339932	None:intergenic	15.0%
!	AGAAACAATTCATTTCACTT+TGG	+	chr7.2:6340233-6340252	MS.gene07097:CDS	25.0%
!	GAATGAATTTGAGAAAACTA+TGG	+	chr7.2:6340335-6340354	MS.gene07097:CDS	25.0%
!	TAAGCAGACAAGTAAAAATA+AGG	-	chr7.2:6339957-6339976	None:intergenic	25.0%
!	TATTATGACAAAATCTAGGT+TGG	+	chr7.2:6340017-6340036	MS.gene07097:intron	25.0%
!	TTTAGTAATGCAGGAATAAT+AGG	+	chr7.2:6340282-6340301	MS.gene07097:CDS	25.0%
!	TTTGATGTAGTATAACCATT+AGG	-	chr7.2:6340483-6340502	None:intergenic	25.0%
!!	AATAACAAATGCTCCATTTT+CGG	-	chr7.2:6340109-6340128	None:intergenic	25.0%
!!!	GATATTTTGTTTAGTAATGC+AGG	+	chr7.2:6340273-6340292	MS.gene07097:CDS	25.0%
	AGTAGACATTCAAGATGAAT+TGG	+	chr7.2:6340131-6340150	MS.gene07097:CDS	30.0%
	AGTTCTCATGCTAATTTGAA+GGG	+	chr7.2:6340651-6340670	MS.gene07097:CDS	30.0%
	ATATCATCATTGTGATGTCA+GGG	+	chr7.2:6340194-6340213	MS.gene07097:CDS	30.0%
	GTAGACATTCAAGATGAATT+GGG	+	chr7.2:6340132-6340151	MS.gene07097:CDS	30.0%
	TAGTTCTCATGCTAATTTGA+AGG	+	chr7.2:6340650-6340669	MS.gene07097:CDS	30.0%
	TTATATCAGTGGTCATAACT+TGG	+	chr7.2:6340737-6340756	MS.gene07097:CDS	30.0%
!	ACATCAAAACATGCTCTTTT+AGG	+	chr7.2:6340495-6340514	MS.gene07097:CDS	30.0%
!	CATTTCACTTTGGAAAAACA+CGG	+	chr7.2:6340243-6340262	MS.gene07097:CDS	30.0%
!	GTTAATAGTATATCCCCTTT+TGG	+	chr7.2:6340564-6340583	MS.gene07097:CDS	30.0%
	ACTATGGCTACAAATGTTGT+TGG	+	chr7.2:6340351-6340370	MS.gene07097:CDS	35.0%
	CATATCATCATTGTGATGTC+AGG	+	chr7.2:6340193-6340212	MS.gene07097:CDS	35.0%
	CGTAAAGTTGCAGATTCAAT+AGG	+	chr7.2:6340156-6340175	MS.gene07097:CDS	35.0%
	CTACTAGATTCAACTTCATG+AGG	-	chr7.2:6340630-6340649	None:intergenic	35.0%
	GATGAAGCTGTTTATATCAG+TGG	+	chr7.2:6340726-6340745	MS.gene07097:CDS	35.0%
	GGAATAATAGGCTCTTTATC+TGG	+	chr7.2:6340294-6340313	MS.gene07097:CDS	35.0%
	GTGAAATTGTTTGCCGAAAA+TGG	+	chr7.2:6340093-6340112	MS.gene07097:CDS	35.0%
	TAGTGCATATAATCGATCCA+CGG	-	chr7.2:6340428-6340447	None:intergenic	35.0%
	TTGTAAGCTATACACGAAAG+AGG	-	chr7.2:6340600-6340619	None:intergenic	35.0%
!	ATGACAAAATCTAGGTTGGA+GGG	+	chr7.2:6340021-6340040	MS.gene07097:intron	35.0%
!	TATGACAAAATCTAGGTTGG+AGG	+	chr7.2:6340020-6340039	MS.gene07097:intron	35.0%
!!	TTTGAAGGGTATTGTGTTGA+AGG	+	chr7.2:6340665-6340684	MS.gene07097:CDS	35.0%
	AAATCAGCTTGTGGAGAACT+TGG	+	chr7.2:6340525-6340544	MS.gene07097:CDS	40.0%
	ATGGTGGCTAAAAAAATCCG+TGG	+	chr7.2:6340408-6340427	MS.gene07097:CDS	40.0%
	GGTAAGGTGGCAATAATAAC+AGG	+	chr7.2:6340042-6340061	MS.gene07097:CDS	40.0%
	GGTCATAACTTGGTTGTTGA+TGG	+	chr7.2:6340747-6340766	MS.gene07097:CDS	40.0%
	TGATGTCAGGGATGAAAAAC+AGG	+	chr7.2:6340206-6340225	MS.gene07097:CDS	40.0%
	TGTTTCTTCACCAATTCCAC+TGG	-	chr7.2:6340073-6340092	None:intergenic	40.0%
!	AAAATCTAGGTTGGAGGGTA+AGG	+	chr7.2:6340026-6340045	MS.gene07097:intron	40.0%
!	AGATGGAGTATTACGAACCA+CGG	-	chr7.2:6340781-6340800	None:intergenic	40.0%
!	CATAACTTGGTTGTTGATGG+TGG	+	chr7.2:6340750-6340769	MS.gene07097:CDS	40.0%
!!!	ACGGATTTTTTTAGCCACCA+TGG	-	chr7.2:6340409-6340428	None:intergenic	40.0%
	ACTAGCGTTGCAGCTTCTAT+TGG	+	chr7.2:6340447-6340466	MS.gene07097:CDS	45.0%
	ATAATAACAGGTGCAGCCAG+TGG	+	chr7.2:6340054-6340073	MS.gene07097:CDS	45.0%
	ATTGGTGGAACAGGTCCTAA+TGG	+	chr7.2:6340465-6340484	MS.gene07097:CDS	45.0%
	GGACTTGTGAAATCAGCTTG+TGG	+	chr7.2:6340516-6340535	MS.gene07097:CDS	45.0%
!	AGGTGTTGCAACTCCAAAAG+GGG	-	chr7.2:6340580-6340599	None:intergenic	45.0%
!	TACATATCAGGCGTTGCAGA+TGG	-	chr7.2:6340798-6340817	None:intergenic	45.0%
!	TGTGGAGAACTTGGTGGTTA+TGG	+	chr7.2:6340534-6340553	MS.gene07097:CDS	45.0%
!!	AGAGGTGTTGCAACTCCAAA+AGG	-	chr7.2:6340582-6340601	None:intergenic	45.0%
!!	GAGGTGTTGCAACTCCAAAA+GGG	-	chr7.2:6340581-6340600	None:intergenic	45.0%
	AGCGTTGCAGCTTCTATTGG+TGG	+	chr7.2:6340450-6340469	MS.gene07097:CDS	50.0%
	GCAGCTTCTATTGGTGGAAC+AGG	+	chr7.2:6340456-6340475	MS.gene07097:CDS	50.0%
	TCAGCTTGTGGAGAACTTGG+TGG	+	chr7.2:6340528-6340547	MS.gene07097:CDS	50.0%
!	ATCTAGGTTGGAGGGTAAGG+TGG	+	chr7.2:6340029-6340048	MS.gene07097:intron	50.0%
!!	TGTTGATGGTGGTTTCTCCG+TGG	+	chr7.2:6340761-6340780	MS.gene07097:CDS	50.0%
	ACAGGTGCAGCCAGTGGAAT+TGG	+	chr7.2:6340060-6340079	MS.gene07097:CDS	55.0%
	TAAGCATGCTGCGCGCGCCA+TGG	+	chr7.2:6340389-6340408	MS.gene07097:CDS	65.0%
	GCATGCTGCGCGCGCCATGG+TGG	+	chr7.2:6340392-6340411	MS.gene07097:CDS	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr7.2	gene	6339895	6340818	6339895	ID=MS.gene07097
chr7.2	mRNA	6339895	6340818	6339895	ID=MS.gene07097.t1;Parent=MS.gene07097
chr7.2	exon	6339895	6339905	6339895	ID=MS.gene07097.t1.exon1;Parent=MS.gene07097.t1
chr7.2	CDS	6339895	6339905	6339895	ID=cds.MS.gene07097.t1;Parent=MS.gene07097.t1
chr7.2	exon	6340035	6340818	6340035	ID=MS.gene07097.t1.exon2;Parent=MS.gene07097.t1
chr7.2	CDS	6340035	6340818	6340035	ID=cds.MS.gene07097.t1;Parent=MS.gene07097.t1

Gene Sequence

>MS.gene07097

ATGAAGCAAAGGTATCCTATAGTTTGATATATATATGTCTCTATAGTTTTGTTCTGTTTCCTTATTTTTACTTGTCTGCTTAATTTTGATTAATTGACTTTATTTTATTTTCTTGCATAATATATTATGACAAAATCTAGGTTGGAGGGTAAGGTGGCAATAATAACAGGTGCAGCCAGTGGAATTGGTGAAGAAACAGTGAAATTGTTTGCCGAAAATGGAGCATTTGTTATTGCAGTAGACATTCAAGATGAATTGGGTCGTAAAGTTGCAGATTCAATAGGCTCAGATAAAGTAACATATCATCATTGTGATGTCAGGGATGAAAAACAGGTCGAAGAAACAATTCATTTCACTTTGGAAAAACACGGTTGCATCGATATTTTGTTTAGTAATGCAGGAATAATAGGCTCTTTATCTGGAATACTTGATCTTGATTTGAATGAATTTGAGAAAACTATGGCTACAAATGTTGTTGGTGCAGCTGCTACAATTAAGCATGCTGCGCGCGCCATGGTGGCTAAAAAAATCCGTGGATCGATTATATGCACTACTAGCGTTGCAGCTTCTATTGGTGGAACAGGTCCTAATGGTTATACTACATCAAAACATGCTCTTTTAGGACTTGTGAAATCAGCTTGTGGAGAACTTGGTGGTTATGGAATTAGAGTTAATAGTATATCCCCTTTTGGAGTTGCAACACCTCTTTCGTGTATAGCTTACAATCTTGAACCTCATGAAGTTGAATCTAGTAGTAGTTCTCATGCTAATTTGAAGGGTATTGTGTTGAAGGCTAAGCATGTTGCAGAAGCAGCTTTGTTTCTTGCTTCTGATGAAGCTGTTTATATCAGTGGTCATAACTTGGTTGTTGATGGTGGTTTCTCCGTGGTTCGTAATACTCCATCTGCAACGCCTGATATGTAG

Protein sequence

>MS.gene07097.t1

MKQRLEGKVAIITGAASGIGEETVKLFAENGAFVIAVDIQDELGRKVADSIGSDKVTYHHCDVRDEKQVEETIHFTLEKHGCIDILFSNAGIIGSLSGILDLDLNEFEKTMATNVVGAAATIKHAARAMVAKKIRGSIICTTSVAASIGGTGPNGYTTSKHALLGLVKSACGELGGYGIRVNSISPFGVATPLSCIAYNLEPHEVESSSSSHANLKGIVLKAKHVAEAALFLASDEAVYISGHNLVVDGGFSVVRNTPSATPDM