AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene024269

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024269.t1 MTR_7g083870 98.671 301 3 1 1 300 1 301 0.0 601
MS.gene024269.t1 MTR_7g107670 56.884 276 118 1 23 298 22 296 4.47e-112 326
MS.gene024269.t1 MTR_7g071680 49.632 272 124 4 32 290 27 298 1.40e-83 254
MS.gene024269.t1 MTR_4g052320 49.807 259 121 4 33 290 7 257 3.40e-78 239
MS.gene024269.t1 MTR_4g052350 51.562 256 114 3 32 286 12 258 1.35e-76 235
MS.gene024269.t1 MTR_4g052300 49.071 269 122 5 33 298 7 263 4.42e-76 233
MS.gene024269.t1 MTR_4g052340 50.379 264 118 6 32 293 12 264 3.27e-74 229
MS.gene024269.t1 MTR_3g113870 52.683 205 96 1 42 246 29 232 3.00e-72 223
MS.gene024269.t1 MTR_7g110140 47.940 267 130 4 33 297 5 264 1.69e-70 219
MS.gene024269.t1 MTR_7g105460 50.000 268 125 6 27 293 7 266 6.20e-69 215
MS.gene024269.t1 MTR_4g078630 46.324 272 135 7 32 296 17 284 2.04e-68 214
MS.gene024269.t1 MTR_7g110130 45.977 261 133 4 32 290 4 258 2.87e-68 213
MS.gene024269.t1 MTR_2g090165 44.737 266 137 6 32 295 4 261 9.88e-68 212
MS.gene024269.t1 MTR_3g020670 46.591 264 125 4 32 286 14 270 1.73e-65 207
MS.gene024269.t1 MTR_6g035395 45.769 260 121 5 32 290 3 243 2.78e-63 200
MS.gene024269.t1 MTR_7g110160 45.038 262 117 6 32 291 4 240 1.11e-62 198
MS.gene024269.t1 MTR_6g023590 42.188 256 139 5 33 285 12 261 1.46e-60 194
MS.gene024269.t1 MTR_6g023990 41.406 256 141 5 33 285 13 262 4.11e-60 192
MS.gene024269.t1 MTR_7g105580 39.773 264 134 3 31 293 5 244 2.80e-58 187
MS.gene024269.t1 MTR_6g023610 40.530 264 144 6 27 285 6 261 1.15e-56 184
MS.gene024269.t1 MTR_6g023910 40.698 258 140 6 33 285 12 261 2.73e-56 183
MS.gene024269.t1 MTR_6g023950 40.385 260 144 6 33 288 12 264 3.40e-54 177
MS.gene024269.t1 MTR_7g105590 49.474 190 94 2 31 219 5 193 1.00e-53 174
MS.gene024269.t1 MTR_6g023600 39.844 256 145 5 33 285 12 261 9.33e-53 174
MS.gene024269.t1 MTR_6g023600 39.062 256 141 6 33 285 12 255 4.71e-48 161
MS.gene024269.t1 MTR_7g105570 41.065 263 98 6 31 293 18 223 2.80e-45 153
MS.gene024269.t1 MTR_4g084800 56.489 131 55 2 32 161 11 140 4.02e-42 142
MS.gene024269.t1 MTR_3g085740 30.502 259 162 6 32 285 73 318 5.71e-26 105
MS.gene024269.t1 MTR_4g132850 30.385 260 163 9 32 287 5 250 1.62e-23 97.1
MS.gene024269.t1 MTR_1196s0010 30.605 281 158 11 18 288 263 516 3.20e-23 99.8
MS.gene024269.t1 MTR_3g068070 30.350 257 164 8 34 286 15 260 1.65e-22 94.7
MS.gene024269.t1 MTR_1g051165 28.625 269 169 7 32 286 12 271 3.49e-22 94.0
MS.gene024269.t1 MTR_3g068085 30.739 257 163 7 34 286 15 260 1.07e-21 92.4
MS.gene024269.t1 MTR_3g068065 30.233 258 165 7 34 287 17 263 1.37e-21 92.4
MS.gene024269.t1 MTR_3g068155 30.943 265 162 8 30 286 13 264 1.37e-20 89.7
MS.gene024269.t1 MTR_7g094520 29.963 267 154 10 34 285 11 259 2.19e-20 88.6
MS.gene024269.t1 MTR_4g058810 29.389 262 167 7 34 286 11 263 4.24e-20 88.2
MS.gene024269.t1 MTR_7g094510 29.119 261 164 8 34 285 6 254 7.27e-20 87.0
MS.gene024269.t1 MTR_1g082760 29.278 263 162 7 33 284 39 288 1.21e-19 87.4
MS.gene024269.t1 MTR_4g131740 29.699 266 158 11 33 284 39 289 2.00e-19 86.7
MS.gene024269.t1 MTR_4g058840 29.008 262 168 7 34 286 11 263 5.75e-19 85.1
MS.gene024269.t1 MTR_4g058820 29.008 262 168 7 34 286 11 263 5.75e-19 85.1
MS.gene024269.t1 MTR_7g113650 28.897 263 163 7 33 284 39 288 7.21e-19 85.1
MS.gene024269.t1 MTR_7g063390 30.739 257 167 6 34 286 16 265 4.82e-17 79.7
MS.gene024269.t1 MTR_4g097510 30.366 191 125 3 35 222 3 188 9.83e-17 79.0
MS.gene024269.t1 MTR_3g068175 28.016 257 170 8 34 286 17 262 1.70e-15 75.5
MS.gene024269.t1 MTR_7g063330 28.897 263 165 8 34 287 15 264 2.70e-15 74.7
MS.gene024269.t1 MTR_1g068955 28.462 260 164 8 34 283 14 261 3.30e-15 74.7
MS.gene024269.t1 MTR_7g063320 29.297 256 170 5 34 285 15 263 4.20e-15 73.9
MS.gene024269.t1 MTR_8g442750 29.740 269 155 11 34 285 14 265 2.28e-14 72.4
MS.gene024269.t1 MTR_7g063360 27.413 259 173 6 34 286 16 265 3.53e-14 71.6
MS.gene024269.t1 MTR_4g064887 26.236 263 167 6 34 286 15 260 4.55e-14 71.2
MS.gene024269.t1 MTR_3g068175 27.586 261 170 9 34 286 17 266 2.04e-13 69.3
MS.gene024269.t1 MTR_7g063270 27.969 261 170 9 34 287 16 265 6.54e-13 67.8
MS.gene024269.t1 MTR_7g063260 28.295 258 174 7 34 287 16 266 8.09e-13 67.4
MS.gene024269.t1 MTR_7g105560 61.538 52 20 0 32 83 11 62 3.08e-12 63.9
MS.gene024269.t1 MTR_7g080410 26.804 194 133 4 34 220 38 229 1.52e-11 64.3
MS.gene024269.t1 MTR_7g080410 26.804 194 133 4 34 220 38 229 1.67e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene024269.t1 AT3G26760 58.863 299 119 2 1 295 1 299 3.36e-124 357
MS.gene024269.t1 AT3G26770 59.925 267 107 0 32 298 39 305 3.64e-119 344
MS.gene024269.t1 AT4G03140 55.224 268 119 1 32 299 76 342 9.05e-103 304
MS.gene024269.t1 AT3G51680 49.259 270 126 5 32 290 30 299 5.62e-78 239
MS.gene024269.t1 AT2G47120 46.097 269 130 6 31 297 3 258 9.00e-71 219
MS.gene024269.t1 AT2G47120 46.067 267 129 6 33 297 6 259 3.20e-70 218
MS.gene024269.t1 AT2G47130 45.594 261 132 4 31 289 3 255 1.72e-68 214
MS.gene024269.t1 AT3G29250 42.456 285 155 5 7 289 15 292 3.39e-68 214
MS.gene024269.t1 AT2G47140 44.828 261 135 5 31 289 3 256 3.59e-68 213
MS.gene024269.t1 AT3G29260 45.211 261 133 4 31 289 3 255 5.95e-68 213
MS.gene024269.t1 AT3G29250 44.828 261 135 5 31 289 3 256 2.97e-66 208
MS.gene024269.t1 AT3G29250 42.160 287 155 6 7 289 15 294 3.93e-66 209
MS.gene024269.t1 AT1G52340 42.697 267 134 4 32 286 16 275 4.86e-59 191
MS.gene024269.t1 AT3G42960 47.510 261 128 6 32 287 6 262 5.30e-59 190
MS.gene024269.t1 AT2G47150 31.128 257 117 7 34 289 1 198 5.60e-26 102
MS.gene024269.t1 AT5G18210 31.439 264 157 9 34 285 8 259 1.45e-25 102
MS.gene024269.t1 AT1G63380 30.075 266 161 8 34 286 15 268 3.17e-24 99.8
MS.gene024269.t1 AT1G63380 30.075 266 161 8 34 286 22 275 3.31e-24 99.8
MS.gene024269.t1 AT1G63380 30.075 266 161 8 34 286 19 272 3.48e-24 99.8
MS.gene024269.t1 AT1G63380 30.075 266 161 8 34 286 17 270 3.53e-24 99.4
MS.gene024269.t1 AT1G62610 29.434 265 164 7 34 286 14 267 5.14e-23 96.3
MS.gene024269.t1 AT1G62610 29.434 265 164 7 34 286 15 268 5.29e-23 96.3
MS.gene024269.t1 AT1G62610 29.434 265 164 7 34 286 19 272 5.50e-23 96.3
MS.gene024269.t1 AT1G62610 29.434 265 164 7 34 286 13 266 5.71e-23 96.3
MS.gene024269.t1 AT2G17845 29.658 263 164 6 34 284 47 300 5.76e-23 96.7
MS.gene024269.t1 AT1G24360 29.352 293 182 10 1 285 42 317 3.20e-22 94.7
MS.gene024269.t1 AT3G55290 30.534 262 164 6 34 286 18 270 5.90e-22 93.6
MS.gene024269.t1 AT4G13180 30.268 261 161 9 34 285 13 261 6.28e-22 93.2
MS.gene024269.t1 AT3G55290 30.534 262 164 6 34 286 17 269 7.40e-22 93.2
MS.gene024269.t1 AT2G29150 31.818 264 163 11 34 293 16 266 1.02e-21 92.4
MS.gene024269.t1 AT5G18210 31.452 248 146 9 34 269 8 243 5.87e-21 90.5
MS.gene024269.t1 AT3G03980 29.851 268 160 8 34 285 14 269 6.60e-21 90.5
MS.gene024269.t1 AT2G29340 28.788 264 172 7 34 293 7 258 9.46e-21 89.7
MS.gene024269.t1 AT2G29340 28.788 264 172 7 34 293 7 258 2.03e-20 89.7
MS.gene024269.t1 AT2G29370 28.302 265 174 8 34 294 16 268 3.70e-20 88.2
MS.gene024269.t1 AT5G06060 27.341 267 172 9 34 293 9 260 3.08e-19 85.5
MS.gene024269.t1 AT3G04000 29.478 268 160 8 34 284 14 269 4.67e-19 85.5
MS.gene024269.t1 AT4G05530 31.439 264 155 10 32 287 7 252 5.91e-19 84.7
MS.gene024269.t1 AT2G29300 27.652 264 163 8 34 286 7 253 6.50e-19 84.7
MS.gene024269.t1 AT2G29360 27.985 268 176 9 34 296 16 271 1.02e-18 84.3
MS.gene024269.t1 AT2G29300 27.652 264 163 8 34 286 7 253 1.32e-18 84.3
MS.gene024269.t1 AT2G29310 27.237 257 172 6 34 286 7 252 1.44e-18 84.0
MS.gene024269.t1 AT1G07450 27.820 266 171 10 34 293 8 258 1.69e-18 83.6
MS.gene024269.t1 AT3G55310 29.588 267 160 8 34 286 17 269 2.12e-18 83.6
MS.gene024269.t1 AT3G05260 26.515 264 169 6 33 285 36 285 3.14e-18 83.2
MS.gene024269.t1 AT1G54870 27.757 263 166 7 33 284 81 330 3.54e-18 84.0
MS.gene024269.t1 AT1G54870 27.757 263 166 7 33 284 83 332 3.86e-18 83.6
MS.gene024269.t1 AT3G46170 28.897 263 169 6 33 286 25 278 7.13e-18 82.4
MS.gene024269.t1 AT2G30670 27.652 264 175 8 34 293 7 258 2.09e-17 80.5
MS.gene024269.t1 AT2G29320 26.966 267 174 8 34 293 13 265 2.48e-17 80.5
MS.gene024269.t1 AT2G29340 30.412 194 128 4 34 223 7 197 2.50e-17 79.0
MS.gene024269.t1 AT2G29340 30.412 194 128 4 34 223 7 197 2.50e-17 79.0
MS.gene024269.t1 AT2G29290 28.302 265 172 10 34 293 7 258 1.09e-16 78.6
MS.gene024269.t1 AT1G10310 32.178 202 121 6 37 226 18 215 2.09e-16 77.4
MS.gene024269.t1 AT2G29330 26.692 266 175 7 34 293 7 258 1.13e-15 75.9
MS.gene024269.t1 AT1G07440 25.758 264 179 7 34 293 12 262 3.26e-15 74.3
MS.gene024269.t1 AT2G29260 28.996 269 172 10 34 297 68 322 3.86e-15 75.1
MS.gene024269.t1 AT2G29350 27.068 266 177 8 34 295 15 267 4.67e-15 73.9
MS.gene024269.t1 AT2G29310 27.320 194 134 3 34 223 7 197 4.43e-14 70.1
MS.gene024269.t1 AT2G29320 27.692 195 133 4 34 223 13 204 6.86e-14 69.7
MS.gene024269.t1 AT2G29350 29.208 202 136 5 34 231 15 213 2.83e-13 68.2
MS.gene024269.t1 AT3G12800 28.364 275 170 10 34 294 10 271 1.39e-12 67.4
MS.gene024269.t1 AT3G01980 24.324 259 177 6 36 284 5 254 5.34e-12 65.1
MS.gene024269.t1 AT3G01980 24.324 259 177 6 36 284 5 254 5.34e-12 65.1
MS.gene024269.t1 AT2G29310 25.417 240 164 6 51 286 22 250 6.89e-12 64.7
MS.gene024269.t1 AT1G49670 27.848 237 132 8 39 252 9 229 9.97e-12 65.9
MS.gene024269.t1 AT2G29290 27.309 249 163 10 50 293 6 241 1.04e-11 64.3
MS.gene024269.t1 AT1G49670 27.848 237 132 8 39 252 9 229 1.06e-11 65.9
MS.gene024269.t1 AT5G65205 28.293 205 137 4 29 230 1 198 2.17e-11 63.5
MS.gene024269.t1 AT3G03330 25.888 197 132 4 34 220 41 233 3.33e-11 63.5
MS.gene024269.t1 AT5G10050 27.000 200 134 5 35 230 6 197 9.65e-11 61.6

Find 91 sgRNAs with CRISPR-Local

Find 212 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCAATTCCTTTGCAACTTT+TGG 0.096535 7.4:+23234667 None:intergenic
GTTATGCTTGGTGGGATTAT+TGG 0.256279 7.4:+23234520 None:intergenic
CCAATGTCATTGTATCAAAT+TGG 0.270336 7.4:-23234017 MS.gene024269:CDS
AGTGGGCTATTTGGTGGGCT+TGG 0.274352 7.4:-23234158 MS.gene024269:CDS
GCCAAAAGTTGCAAAGGAAT+TGG 0.277997 7.4:-23234668 MS.gene024269:CDS
CGTTGTCGGCGATGATTACT+TGG 0.280742 7.4:+23234704 None:intergenic
GTGATGATACCAAAGGGATA+TGG 0.297661 7.4:-23234206 MS.gene024269:CDS
GTGGGCTATTTGGTGGGCTT+GGG 0.302403 7.4:-23234157 MS.gene024269:CDS
TCAAGCATAAGTGGGCTATT+TGG 0.324040 7.4:-23234167 MS.gene024269:CDS
AGTTCACTGCTTCTTCTACT+TGG 0.342962 7.4:+23234602 None:intergenic
TATGCTTGATGTACATATAA+TGG 0.345255 7.4:+23234181 None:intergenic
CAAATTGGAAAGTTTATTCC+TGG 0.346532 7.4:-23234002 MS.gene024269:CDS
TACAACAATGCTGGCATAAC+AGG 0.355905 7.4:-23234544 MS.gene024269:CDS
AACTTTGCCATAACAAACTA+TGG 0.360430 7.4:-23234583 MS.gene024269:CDS
AAATTTCGCGTTTCCTTCTC+CGG 0.363396 7.4:-23233811 MS.gene024269:CDS
AATTTCCCCTATCTGTTCAT+AGG 0.378823 7.4:+23233974 None:intergenic
TAGTTTACCATAGTTTGTTA+TGG 0.381695 7.4:+23234576 None:intergenic
CCCACCAAGCATAACAGAAT+TGG 0.384770 7.4:-23234512 MS.gene024269:CDS
GTCATGAGAATCAATGTAAC+AGG 0.385275 7.4:-23234469 MS.gene024269:CDS
CCCCATGTTGGACAAATTCA+TGG 0.396340 7.4:+23234728 None:intergenic
GTTCACTGCTTCTTCTACTT+GGG 0.400670 7.4:+23234603 None:intergenic
AACATCAATGTCCTCACATT+TGG 0.400849 7.4:+23233923 None:intergenic
CCAAAAGTTGCAAAGGAATT+GGG 0.408007 7.4:-23234667 MS.gene024269:CDS
CACCAACTTCAGCAATGGTT+TGG 0.409202 7.4:-23237070 MS.gene024269:CDS
TGCTAGAGCTGCATTGTACT+TGG 0.426496 7.4:-23233901 MS.gene024269:CDS
GCCGACAACGACACTAAACT+TGG 0.431149 7.4:-23234691 MS.gene024269:CDS
TCCAATTCTGTTATGCTTGG+TGG 0.440019 7.4:+23234511 None:intergenic
GGTCAGAATCTCATAGTTGA+TGG 0.441728 7.4:-23233852 MS.gene024269:CDS
CCCAAGTTTAGTGTCGTTGT+CGG 0.443828 7.4:+23234690 None:intergenic
ACTGGATCAGCAAGTGGACT+TGG 0.446502 7.4:-23234763 MS.gene024269:CDS
CCAATTCTGTTATGCTTGGT+GGG 0.447299 7.4:+23234512 None:intergenic
AACCAAACCATTGCTGAAGT+TGG 0.452789 7.4:+23237068 None:intergenic
GTAGACTTCGATATTGTGTA+AGG 0.457400 7.4:+23234128 None:intergenic
TTTCCTTCTCCGGATCAAAT+CGG 0.468245 7.4:-23233801 MS.gene024269:CDS
GCTAGTGAACTATGTGGAGC+TGG 0.476731 7.4:-23234080 MS.gene024269:CDS
AATGTAACAGGAGTTATTGC+AGG 0.478783 7.4:-23234457 MS.gene024269:intron
TGATGATACCAAAGGGATAT+GGG 0.491753 7.4:-23234205 MS.gene024269:CDS
GATGATGCTAAGTTTATCTC+AGG 0.492118 7.4:-23233873 MS.gene024269:CDS
AGCATAAGTGGGCTATTTGG+TGG 0.499085 7.4:-23234164 MS.gene024269:CDS
GCCCATGAATTTGTCCAACA+TGG 0.508068 7.4:-23234730 MS.gene024269:CDS
GTGTGACCTATGAACAGATA+GGG 0.509095 7.4:-23233980 MS.gene024269:CDS
CCAATTTGATACAATGACAT+TGG 0.512550 7.4:+23234017 None:intergenic
TGATTACTTGGGCCCCATGT+TGG 0.514016 7.4:+23234716 None:intergenic
ATATCGAAGTCTACAATACC+TGG 0.516201 7.4:-23234119 MS.gene024269:CDS
ATAATGGACCCATATCCCTT+TGG 0.520967 7.4:+23234197 None:intergenic
TTCGATATTGTGTAAGGATG+AGG 0.521215 7.4:+23234134 None:intergenic
ATGCAACAGTTGGTGGAAGA+AGG 0.524744 7.4:-23237026 MS.gene024269:intron
CAGATAGGGGAAATTGTTAG+TGG 0.528334 7.4:-23233966 MS.gene024269:CDS
CCTAGCTAACCGATTTGATC+CGG 0.532831 7.4:+23233792 None:intergenic
GGTGTGACCTATGAACAGAT+AGG 0.533977 7.4:-23233981 MS.gene024269:CDS
CCCATGAATTTGTCCAACAT+GGG 0.534289 7.4:-23234729 MS.gene024269:CDS
ATATGTACATCAAGCATAAG+TGG 0.539440 7.4:-23234176 MS.gene024269:CDS
TGATACAATGACATTGGTGT+AGG 0.540244 7.4:+23234023 None:intergenic
AGATTCTATGCAACAGTTGG+TGG 0.542590 7.4:-23237033 MS.gene024269:CDS
TCATGCTCAGAACACTAGCC+AGG 0.543355 7.4:-23237256 MS.gene024269:intron
ATTCCACATACTGTGCTGAA+TGG 0.544450 7.4:+23234644 None:intergenic
GACATCATGTACAACAATGC+TGG 0.549387 7.4:-23234553 MS.gene024269:CDS
AGGTCCAATTCTGTTATGCT+TGG 0.553618 7.4:+23234508 None:intergenic
AAGCTCACCAACTTCAGCAA+TGG 0.557570 7.4:-23237075 MS.gene024269:CDS
GCATAAGTGGGCTATTTGGT+GGG 0.558522 7.4:-23234163 MS.gene024269:CDS
ATCAGCAAGTGGACTTGGAA+AGG 0.560560 7.4:-23234758 MS.gene024269:CDS
GGGCCATTCAGCACAGTATG+TGG 0.564489 7.4:-23234647 MS.gene024269:CDS
GCCGCAGATTTCACCACCCC+AGG 0.565265 7.4:+23234101 None:intergenic
GGACCTTGATGAATTTGAGA+AGG 0.567216 7.4:-23234491 MS.gene024269:CDS
AGCAGATTCTATGCAACAGT+TGG 0.569130 7.4:-23237036 MS.gene024269:CDS
CCCATGTTGGACAAATTCAT+GGG 0.569913 7.4:+23234729 None:intergenic
TGACCTTCTCAAATTCATCA+AGG 0.579050 7.4:+23234488 None:intergenic
TAACCGATTTGATCCGGAGA+AGG 0.582964 7.4:+23233798 None:intergenic
CTAGTGAACTATGTGGAGCT+GGG 0.585535 7.4:-23234079 MS.gene024269:CDS
TATGTACATCAAGCATAAGT+GGG 0.587715 7.4:-23234175 MS.gene024269:CDS
GCTCGAGTGATGATACCAAA+GGG 0.593471 7.4:-23234212 MS.gene024269:CDS
ATCTGTTCATAGGTCACACC+AGG 0.597148 7.4:+23233984 None:intergenic
CAGAATCTCATAGTTGATGG+AGG 0.597836 7.4:-23233849 MS.gene024269:CDS
TATCGAAGTCTACAATACCT+GGG 0.601318 7.4:-23234118 MS.gene024269:CDS
ACTTGGGCCAAAAGTTGCAA+AGG 0.606003 7.4:-23234674 MS.gene024269:CDS
GTTGTCGGCGATGATTACTT+GGG 0.621879 7.4:+23234705 None:intergenic
CCATGAATTTGTCCAACATG+GGG 0.626707 7.4:-23234728 MS.gene024269:CDS
ATCATAACTGGATCAGCAAG+TGG 0.638092 7.4:-23234769 MS.gene024269:CDS
GAAGTCTACAATACCTGGGG+TGG 0.639167 7.4:-23234114 MS.gene024269:CDS
AGAATCTCATAGTTGATGGA+GGG 0.642750 7.4:-23233848 MS.gene024269:CDS
CGTTGCAGGTATAAAACATG+CGG 0.648055 7.4:-23234234 MS.gene024269:intron
TCTGCGGCTAGTGAACTATG+TGG 0.653433 7.4:-23234086 MS.gene024269:CDS
CCGACAACGACACTAAACTT+GGG 0.660224 7.4:-23234690 MS.gene024269:CDS
TGTGACCTATGAACAGATAG+GGG 0.662078 7.4:-23233979 MS.gene024269:CDS
TCTCAAAGGTGCCAAATGTG+AGG 0.663215 7.4:-23233934 MS.gene024269:CDS
AGTGGACTTAGTGCTCTCAA+AGG 0.666537 7.4:-23233948 MS.gene024269:CDS
GGCTCGAGTGATGATACCAA+AGG 0.666702 7.4:-23234213 MS.gene024269:CDS
ACCTGGGGTGGTGAAATCTG+CGG 0.676557 7.4:-23234102 MS.gene024269:CDS
GGAATGTGATGTCACTGTTG+AGG 0.683235 7.4:-23234626 MS.gene024269:CDS
ATCGAAGTCTACAATACCTG+GGG 0.685324 7.4:-23234117 MS.gene024269:CDS
ATTGGTGTAGGAATTGCAGT+TGG 0.686643 7.4:+23234035 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAACATAAGAAAAAATAT+GGG - chr7.4:23236661-23236680 MS.gene024269:intron 10.0%
!! AAATTTATTTAACATGAATT+TGG + chr7.4:23236697-23236716 None:intergenic 10.0%
!! ATATATATAGAATAATTGTT+TGG + chr7.4:23233863-23233882 None:intergenic 10.0%
!! CTTAAATACAATAAAAAAAT+TGG - chr7.4:23234399-23234418 MS.gene024269:intron 10.0%
!! AAATAAATAATGATTGATGA+TGG + chr7.4:23236116-23236135 None:intergenic 15.0%
!! AATAAAATTGAATTAAACAG+TGG + chr7.4:23235155-23235174 None:intergenic 15.0%
!! AATTAAAAAAGAATGACTAT+TGG + chr7.4:23233832-23233851 None:intergenic 15.0%
!! CAAAAACATAAGAAAAAATA+TGG - chr7.4:23236660-23236679 MS.gene024269:intron 15.0%
!! CAACTGTAAATAAATAAAAA+AGG + chr7.4:23234615-23234634 None:intergenic 15.0%
!! GTTCAATTAAAAAATAAAAG+TGG + chr7.4:23235389-23235408 None:intergenic 15.0%
!! TACGAATGAAAATAAAAAAT+AGG - chr7.4:23235054-23235073 MS.gene024269:intron 15.0%
!! TCCAAAAATAAATAAACTAT+AGG - chr7.4:23234212-23234231 MS.gene024269:CDS 15.0%
!!! GTTCTTTTAAACAATTTATT+TGG - chr7.4:23234980-23234999 MS.gene024269:intron 15.0%
!!! TCATTAGTTTCATTATTTTA+TGG + chr7.4:23235094-23235113 None:intergenic 15.0%
!!! TCCTATAGTTTATTTATTTT+TGG + chr7.4:23234216-23234235 None:intergenic 15.0%
!!! TTAAATCTTTTATATATGCA+GGG - chr7.4:23233948-23233967 MS.gene024269:CDS 15.0%
!!! TTTAAATCTTTTATATATGC+AGG - chr7.4:23233947-23233966 MS.gene024269:CDS 15.0%
!!! TTTGTTTTCTATTTTCTTTT+TGG + chr7.4:23236644-23236663 None:intergenic 15.0%
!! AAATGAAATTGAATTCAAGT+GGG + chr7.4:23235018-23235037 None:intergenic 20.0%
!! AATATGCTTACAAAAATGAA+TGG + chr7.4:23235677-23235696 None:intergenic 20.0%
!! AATTATTATCTTGAAGAGAT+AGG + chr7.4:23235615-23235634 None:intergenic 20.0%
!! AGACAAGTTTATATTTGAAA+GGG - chr7.4:23235794-23235813 MS.gene024269:intron 20.0%
!! ATCTTACAAAAAAATCTTGT+TGG - chr7.4:23235982-23236001 MS.gene024269:intron 20.0%
!! ATTATTATCTTGAAGAGATA+GGG + chr7.4:23235614-23235633 None:intergenic 20.0%
!! CAATGAATCAAAAGTAATAT+AGG - chr7.4:23234759-23234778 MS.gene024269:CDS 20.0%
!! GTTTGAATCAAAAGTAATAT+AGG - chr7.4:23234800-23234819 MS.gene024269:intron 20.0%
!! TAAATGAAATTGAATTCAAG+TGG + chr7.4:23235019-23235038 None:intergenic 20.0%
!! TACTATAATTGCACATAATA+TGG + chr7.4:23234086-23234105 None:intergenic 20.0%
!! TATACTTTAGTTAGAAACAA+TGG - chr7.4:23235253-23235272 MS.gene024269:intron 20.0%
!!! ACTTTTGATTCAAACATATT+CGG + chr7.4:23234795-23234814 None:intergenic 20.0%
!!! ATTGATTAGTTTAGAAATCT+AGG + chr7.4:23235444-23235463 None:intergenic 20.0%
!!! CACTTTTTTTTTACAATGTT+TGG + chr7.4:23235474-23235493 None:intergenic 20.0%
!!! CATTCAATTCAATTCATTTT+TGG - chr7.4:23236227-23236246 MS.gene024269:intron 20.0%
!!! CTTTTAAACAATTTATTTGG+TGG - chr7.4:23234983-23235002 MS.gene024269:intron 20.0%
!!! TACTTTAATTTGGAATTATG+AGG + chr7.4:23235763-23235782 None:intergenic 20.0%
!!! TTACTTTTCAAAGTCATTTA+AGG - chr7.4:23235951-23235970 MS.gene024269:intron 20.0%
! AACATAAGAAAAAATATGGG+AGG - chr7.4:23236664-23236683 MS.gene024269:intron 25.0%
! AAGAACTATAATTACCATGT+CGG + chr7.4:23234966-23234985 None:intergenic 25.0%
! AATCTTGTTGGATAAATCTT+CGG - chr7.4:23235994-23236013 MS.gene024269:intron 25.0%
! AATGATTATGATCCTGAATT+TGG + chr7.4:23235548-23235567 None:intergenic 25.0%
! AGAATCATTAGTTGAGTTAT+TGG + chr7.4:23235416-23235435 None:intergenic 25.0%
! ATAAGTATTCTGTCCTATAT+AGG - chr7.4:23233892-23233911 MS.gene024269:CDS 25.0%
! ATATTGTACTATGTATGATC+AGG - chr7.4:23235225-23235244 MS.gene024269:intron 25.0%
! ATGTCAATTTAGAAGAAAGT+TGG + chr7.4:23234285-23234304 None:intergenic 25.0%
! CTAAATCACAGATATAACTT+AGG + chr7.4:23236776-23236795 None:intergenic 25.0%
! CTAAATGTACACTAAACTAT+AGG - chr7.4:23234179-23234198 MS.gene024269:CDS 25.0%
! CTAACAAATTATCTTCACAT+AGG + chr7.4:23234495-23234514 None:intergenic 25.0%
! GACAAGTTTATATTTGAAAG+GGG - chr7.4:23235795-23235814 MS.gene024269:intron 25.0%
! GAGACAAGTTTATATTTGAA+AGG - chr7.4:23235793-23235812 MS.gene024269:intron 25.0%
! TATGCTTGATGTACATATAA+TGG + chr7.4:23236873-23236892 None:intergenic 25.0%
! TCAAATATAAACTTGTCTCA+AGG + chr7.4:23235792-23235811 None:intergenic 25.0%
! TCATTAAAGCTCTTTACTAT+GGG - chr7.4:23234057-23234076 MS.gene024269:CDS 25.0%
! TGAAAGTAACACAAATCTAA+AGG - chr7.4:23235911-23235930 MS.gene024269:intron 25.0%
! TGTCAATTTAGAAGAAAGTT+GGG + chr7.4:23234284-23234303 None:intergenic 25.0%
!! AAATGACTTTGAAAAGTAAG+AGG + chr7.4:23235950-23235969 None:intergenic 25.0%
!! AACTCAACTAATGATTCTTT+TGG - chr7.4:23235418-23235437 MS.gene024269:intron 25.0%
!! GGATTACAACTTTAAGTTAA+AGG + chr7.4:23236727-23236746 None:intergenic 25.0%
!! TAAGCATTTTTATAAGCATC+TGG - chr7.4:23235704-23235723 MS.gene024269:intron 25.0%
!! TAAGTATATGTTTTCAACAC+AGG - chr7.4:23234453-23234472 MS.gene024269:intron 25.0%
!! TATGAAATTTTCTCAAGTAG+AGG + chr7.4:23236748-23236767 None:intergenic 25.0%
!! TATTGTATTTAAGACAAGAG+AGG + chr7.4:23234392-23234411 None:intergenic 25.0%
!! TCATGGAGTATCAATAAAAA+TGG - chr7.4:23235845-23235864 MS.gene024269:intron 25.0%
!! TTACAACTTTAAGTTAAAGG+TGG + chr7.4:23236724-23236743 None:intergenic 25.0%
!!! TAGTTTACCATAGTTTGTTA+TGG + chr7.4:23236478-23236497 None:intergenic 25.0%
!!! TCATTTCTTTTTCAACAAGT+TGG + chr7.4:23236036-23236055 None:intergenic 25.0%
AACTTTGCCATAACAAACTA+TGG - chr7.4:23236468-23236487 MS.gene024269:intron 30.0%
AAGGTCTCACTACTTTAATT+TGG + chr7.4:23235773-23235792 None:intergenic 30.0%
AATTTGGCTACACAACAAAA+AGG + chr7.4:23235532-23235551 None:intergenic 30.0%
ATATGTACATCAAGCATAAG+TGG - chr7.4:23236875-23236894 MS.gene024269:intron 30.0%
ATCTAAAGACAAGCCTATAT+AGG + chr7.4:23233908-23233927 None:intergenic 30.0%
CAAATTGGAAAGTTTATTCC+TGG - chr7.4:23237049-23237068 MS.gene024269:CDS 30.0%
CCAATGTCATTGTATCAAAT+TGG - chr7.4:23237034-23237053 MS.gene024269:CDS 30.0%
CCAATTTGATACAATGACAT+TGG + chr7.4:23237037-23237056 None:intergenic 30.0%
CTCATTAAAGCTCTTTACTA+TGG - chr7.4:23234056-23234075 MS.gene024269:CDS 30.0%
GAATGAATGAGAATCATCAT+GGG + chr7.4:23236212-23236231 None:intergenic 30.0%
GGAAAAATTGCAATCATAAC+TGG - chr7.4:23236270-23236289 MS.gene024269:intron 30.0%
TATGTACATCAAGCATAAGT+GGG - chr7.4:23236876-23236895 MS.gene024269:intron 30.0%
TCAGTTCATTTCGGATAATT+TGG + chr7.4:23234854-23234873 None:intergenic 30.0%
TCTAAATTGACATGTATGAG+TGG - chr7.4:23234292-23234311 MS.gene024269:intron 30.0%
TGAATGAATGAGAATCATCA+TGG + chr7.4:23236213-23236232 None:intergenic 30.0%
TGCTTACAAAAATGAATGGA+TGG + chr7.4:23235673-23235692 None:intergenic 30.0%
TTAGTTAGAAACAATGGCAA+CGG - chr7.4:23235259-23235278 MS.gene024269:intron 30.0%
! ACATTTAGAGTAGCATAATC+AGG + chr7.4:23234167-23234186 None:intergenic 30.0%
! AGGAAACGCGAAATTTTTAA+TGG + chr7.4:23237236-23237255 None:intergenic 30.0%
! GTGTCAAAAGTTTTACAATG+TGG + chr7.4:23234330-23234349 None:intergenic 30.0%
! GTTTATGTTTGCTAAATCCA+TGG + chr7.4:23235346-23235365 None:intergenic 30.0%
! TGGACGAAGTATTTAAAGTA+TGG + chr7.4:23235653-23235672 None:intergenic 30.0%
!!! ATTTTTTTTCCTTGATTCCC+TGG - chr7.4:23234140-23234159 MS.gene024269:CDS 30.0%
!!! TTTCTTTTTCAACAAGTTGG+AGG + chr7.4:23236033-23236052 None:intergenic 30.0%
AACATCAATGTCCTCACATT+TGG + chr7.4:23237131-23237150 None:intergenic 35.0%
AATGTAACAGGAGTTATTGC+AGG - chr7.4:23236594-23236613 MS.gene024269:intron 35.0%
AATTTCCCCTATCTGTTCAT+AGG + chr7.4:23237080-23237099 None:intergenic 35.0%
AGAGACACGTACACTTAAAA+AGG + chr7.4:23234648-23234667 None:intergenic 35.0%
ATATCGAAGTCTACAATACC+TGG - chr7.4:23236932-23236951 MS.gene024269:intron 35.0%
ATATGCATGTTCATATGCCA+TGG - chr7.4:23235326-23235345 MS.gene024269:intron 35.0%
CATATGAACATGCATATTGG+AGG + chr7.4:23235323-23235342 None:intergenic 35.0%
CCAAAAGTTGCAAAGGAATT+GGG - chr7.4:23236384-23236403 MS.gene024269:intron 35.0%
CTATTGGAGTATATTGAACC+TGG + chr7.4:23233816-23233835 None:intergenic 35.0%
CTCATGAGTTCAGTTCATTT+CGG + chr7.4:23234863-23234882 None:intergenic 35.0%
GATGATGCTAAGTTTATCTC+AGG - chr7.4:23237178-23237197 MS.gene024269:intron 35.0%
GTAGACTTCGATATTGTGTA+AGG + chr7.4:23236926-23236945 None:intergenic 35.0%
GTCAAATAAGTACACGAGTT+AGG + chr7.4:23234684-23234703 None:intergenic 35.0%
GTCATGAGAATCAATGTAAC+AGG - chr7.4:23236582-23236601 MS.gene024269:intron 35.0%
TATCGAAGTCTACAATACCT+GGG - chr7.4:23236933-23236952 MS.gene024269:intron 35.0%
TGACCTTCTCAAATTCATCA+AGG + chr7.4:23236566-23236585 None:intergenic 35.0%
TGATACAATGACATTGGTGT+AGG + chr7.4:23237031-23237050 None:intergenic 35.0%
TGATGATACCAAAGGGATAT+GGG - chr7.4:23236846-23236865 MS.gene024269:intron 35.0%
TGGCATATGAACATGCATAT+TGG + chr7.4:23235326-23235345 None:intergenic 35.0%
TTCGATATTGTGTAAGGATG+AGG + chr7.4:23236920-23236939 None:intergenic 35.0%
! TTTGTTGTGTAGCCAAATTC+AGG - chr7.4:23235533-23235552 MS.gene024269:intron 35.0%
!! AGAATCTCATAGTTGATGGA+GGG - chr7.4:23237203-23237222 MS.gene024269:intron 35.0%
!! TTTCCTTCTAACCTGCTTTT+TGG + chr7.4:23236255-23236274 None:intergenic 35.0%
!!! CATTTTTGGTTCCAAAAAGC+AGG - chr7.4:23236241-23236260 MS.gene024269:intron 35.0%
AAATTTCGCGTTTCCTTCTC+CGG - chr7.4:23237240-23237259 MS.gene024269:intron 40.0%
AACCAAACCATTGCTGAAGT+TGG + chr7.4:23233986-23234005 None:intergenic 40.0%
ACGGATTTCTGTGAAACACA+TGG - chr7.4:23235278-23235297 MS.gene024269:intron 40.0%
AGATTCTATGCAACAGTTGG+TGG - chr7.4:23234018-23234037 MS.gene024269:CDS 40.0%
AGCAGATTCTATGCAACAGT+TGG - chr7.4:23234015-23234034 MS.gene024269:CDS 40.0%
AGGTCCAATTCTGTTATGCT+TGG + chr7.4:23236546-23236565 None:intergenic 40.0%
AGTTCACTGCTTCTTCTACT+TGG + chr7.4:23236452-23236471 None:intergenic 40.0%
ATCATAACTGGATCAGCAAG+TGG - chr7.4:23236282-23236301 MS.gene024269:intron 40.0%
ATCGAAGTCTACAATACCTG+GGG - chr7.4:23236934-23236953 MS.gene024269:intron 40.0%
ATTCCACATACTGTGCTGAA+TGG + chr7.4:23236410-23236429 None:intergenic 40.0%
ATTGGTGTAGGAATTGCAGT+TGG + chr7.4:23237019-23237038 None:intergenic 40.0%
CAGATAGGGGAAATTGTTAG+TGG - chr7.4:23237085-23237104 MS.gene024269:CDS 40.0%
CATCCTTCATCGCTAATTGA+AGG + chr7.4:23235822-23235841 None:intergenic 40.0%
CCAATTCTGTTATGCTTGGT+GGG + chr7.4:23236542-23236561 None:intergenic 40.0%
CCATGAATTTGTCCAACATG+GGG - chr7.4:23236323-23236342 MS.gene024269:intron 40.0%
CCCATGAATTTGTCCAACAT+GGG - chr7.4:23236322-23236341 MS.gene024269:intron 40.0%
CCCATGTTGGACAAATTCAT+GGG + chr7.4:23236325-23236344 None:intergenic 40.0%
CGTTGCAGGTATAAAACATG+CGG - chr7.4:23236817-23236836 MS.gene024269:intron 40.0%
CTTCAATTAGCGATGAAGGA+TGG - chr7.4:23235820-23235839 MS.gene024269:intron 40.0%
GAAAGACAAAAGGAGTTGCT+TGG + chr7.4:23236167-23236186 None:intergenic 40.0%
GACATCATGTACAACAATGC+TGG - chr7.4:23236498-23236517 MS.gene024269:intron 40.0%
GCCAAAAGTTGCAAAGGAAT+TGG - chr7.4:23236383-23236402 MS.gene024269:intron 40.0%
GGACCTTGATGAATTTGAGA+AGG - chr7.4:23236560-23236579 MS.gene024269:intron 40.0%
GGGTGTGAGAAAAGAAAGAT+GGG + chr7.4:23236192-23236211 None:intergenic 40.0%
GGTCAGAATCTCATAGTTGA+TGG - chr7.4:23237199-23237218 MS.gene024269:intron 40.0%
GGTGTGAGAAAAGAAAGATG+GGG + chr7.4:23236191-23236210 None:intergenic 40.0%
GTGATGATACCAAAGGGATA+TGG - chr7.4:23236845-23236864 MS.gene024269:intron 40.0%
GTGTGACCTATGAACAGATA+GGG - chr7.4:23237071-23237090 MS.gene024269:CDS 40.0%
GTGTGAGAAAAGAAAGATGG+GGG + chr7.4:23236190-23236209 None:intergenic 40.0%
GTTCACTGCTTCTTCTACTT+GGG + chr7.4:23236451-23236470 None:intergenic 40.0%
GTTCCAAAAAGCAGGTTAGA+AGG - chr7.4:23236249-23236268 MS.gene024269:intron 40.0%
TACAACAATGCTGGCATAAC+AGG - chr7.4:23236507-23236526 MS.gene024269:intron 40.0%
TCCAATTCTGTTATGCTTGG+TGG + chr7.4:23236543-23236562 None:intergenic 40.0%
TGGGTGTGAGAAAAGAAAGA+TGG + chr7.4:23236193-23236212 None:intergenic 40.0%
TGTGACCTATGAACAGATAG+GGG - chr7.4:23237072-23237091 MS.gene024269:CDS 40.0%
TGTGAGAAAAGAAAGATGGG+GGG + chr7.4:23236189-23236208 None:intergenic 40.0%
TTTCCTTCTCCGGATCAAAT+CGG - chr7.4:23237250-23237269 MS.gene024269:intron 40.0%
! CCCAATTCCTTTGCAACTTT+TGG + chr7.4:23236387-23236406 None:intergenic 40.0%
! GTTATGCTTGGTGGGATTAT+TGG + chr7.4:23236534-23236553 None:intergenic 40.0%
!! ATAATGGACCCATATCCCTT+TGG + chr7.4:23236857-23236876 None:intergenic 40.0%
!! CAGAATCTCATAGTTGATGG+AGG - chr7.4:23237202-23237221 MS.gene024269:intron 40.0%
!! TCAAGCATAAGTGGGCTATT+TGG - chr7.4:23236884-23236903 MS.gene024269:intron 40.0%
!!! CGCTTTTTTGTGTTAACTCC+GGG - chr7.4:23234922-23234941 MS.gene024269:intron 40.0%
!!! GCGCTTTTTTGTGTTAACTC+CGG - chr7.4:23234921-23234940 MS.gene024269:intron 40.0%
AAGATGGGGGGAAAGACAAA+AGG + chr7.4:23236177-23236196 None:intergenic 45.0%
AAGCTCACCAACTTCAGCAA+TGG - chr7.4:23233976-23233995 MS.gene024269:CDS 45.0%
ACTTGGGCCAAAAGTTGCAA+AGG - chr7.4:23236377-23236396 MS.gene024269:intron 45.0%
AGAGTAGCATAATCAGGACC+AGG + chr7.4:23234161-23234180 None:intergenic 45.0%
ATCTGTTCATAGGTCACACC+AGG + chr7.4:23237070-23237089 None:intergenic 45.0%
CACAGTAAACTCATCGTTGC+AGG - chr7.4:23236803-23236822 MS.gene024269:intron 45.0%
CACCAACTTCAGCAATGGTT+TGG - chr7.4:23233981-23234000 MS.gene024269:CDS 45.0%
CCCACCAAGCATAACAGAAT+TGG - chr7.4:23236539-23236558 MS.gene024269:intron 45.0%
CCCCATGTTGGACAAATTCA+TGG + chr7.4:23236326-23236345 None:intergenic 45.0%
CCGACAACGACACTAAACTT+GGG - chr7.4:23236361-23236380 MS.gene024269:intron 45.0%
CTAGTGAACTATGTGGAGCT+GGG - chr7.4:23236972-23236991 MS.gene024269:intron 45.0%
CTGCAACGATGAGTTTACTG+TGG + chr7.4:23236805-23236824 None:intergenic 45.0%
GAGTAGCATAATCAGGACCA+GGG + chr7.4:23234160-23234179 None:intergenic 45.0%
GCCCATGAATTTGTCCAACA+TGG - chr7.4:23236321-23236340 MS.gene024269:intron 45.0%
GCTCGAGTGATGATACCAAA+GGG - chr7.4:23236839-23236858 MS.gene024269:intron 45.0%
GGAATGTGATGTCACTGTTG+AGG - chr7.4:23236425-23236444 MS.gene024269:intron 45.0%
GGACCTTCAATTAGCGATGA+AGG - chr7.4:23235816-23235835 MS.gene024269:intron 45.0%
GGTGTGACCTATGAACAGAT+AGG - chr7.4:23237070-23237089 MS.gene024269:CDS 45.0%
GTACGTGTCTCTCACTTTAG+AGG - chr7.4:23234656-23234675 MS.gene024269:CDS 45.0%
GTTGTCGGCGATGATTACTT+GGG + chr7.4:23236349-23236368 None:intergenic 45.0%
TAATCAGGACCAGGGAATCA+AGG + chr7.4:23234152-23234171 None:intergenic 45.0%
TGACAGACTCTCACAACGTA+AGG - chr7.4:23234826-23234845 MS.gene024269:intron 45.0%
TGCTAGAGCTGCATTGTACT+TGG - chr7.4:23237150-23237169 MS.gene024269:intron 45.0%
! AGTGGACTTAGTGCTCTCAA+AGG - chr7.4:23237103-23237122 MS.gene024269:intron 45.0%
! ATCAGCAAGTGGACTTGGAA+AGG - chr7.4:23236293-23236312 MS.gene024269:intron 45.0%
! CAAGTTGGAGGATGATGTTG+TGG + chr7.4:23236021-23236040 None:intergenic 45.0%
! CCCAAGTTTAGTGTCGTTGT+CGG + chr7.4:23236364-23236383 None:intergenic 45.0%
!! AGCATAAGTGGGCTATTTGG+TGG - chr7.4:23236887-23236906 MS.gene024269:intron 45.0%
!! ATGCAACAGTTGGTGGAAGA+AGG - chr7.4:23234025-23234044 MS.gene024269:CDS 45.0%
!! GCATAAGTGGGCTATTTGGT+GGG - chr7.4:23236888-23236907 MS.gene024269:intron 45.0%
!! TAACCGATTTGATCCGGAGA+AGG + chr7.4:23237256-23237275 None:intergenic 45.0%
!! TCTCAAAGGTGCCAAATGTG+AGG - chr7.4:23237117-23237136 MS.gene024269:intron 45.0%
AGCGATGAAGGATGGAGTCA+TGG - chr7.4:23235828-23235847 MS.gene024269:intron 50.0%
CATATTGGAGGCAAGCTTGC+GGG + chr7.4:23235311-23235330 None:intergenic 50.0%
CGTTGTCGGCGATGATTACT+TGG + chr7.4:23236350-23236369 None:intergenic 50.0%
GAAGTCTACAATACCTGGGG+TGG - chr7.4:23236937-23236956 MS.gene024269:intron 50.0%
GCATATTGGAGGCAAGCTTG+CGG + chr7.4:23235312-23235331 None:intergenic 50.0%
GCCGACAACGACACTAAACT+TGG - chr7.4:23236360-23236379 MS.gene024269:intron 50.0%
GCTAGTGAACTATGTGGAGC+TGG - chr7.4:23236971-23236990 MS.gene024269:intron 50.0%
GGCTCGAGTGATGATACCAA+AGG - chr7.4:23236838-23236857 MS.gene024269:intron 50.0%
GTGTTAACTCCGGGTCCTAT+GGG - chr7.4:23234931-23234950 MS.gene024269:intron 50.0%
TCTGCGGCTAGTGAACTATG+TGG - chr7.4:23236965-23236984 MS.gene024269:intron 50.0%
TGATTACTTGGGCCCCATGT+TGG + chr7.4:23236338-23236357 None:intergenic 50.0%
TGTGTTAACTCCGGGTCCTA+TGG - chr7.4:23234930-23234949 MS.gene024269:intron 50.0%
! ACTGGATCAGCAAGTGGACT+TGG - chr7.4:23236288-23236307 MS.gene024269:intron 50.0%
AACTCCGGGTCCTATGGGAA+AGG - chr7.4:23234936-23234955 MS.gene024269:intron 55.0%
ACCTGGGGTGGTGAAATCTG+CGG - chr7.4:23236949-23236968 MS.gene024269:intron 55.0%
ACTCCGGGTCCTATGGGAAA+GGG - chr7.4:23234937-23234956 MS.gene024269:intron 55.0%
ATGGGAAAGGGACACCGACA+TGG - chr7.4:23234949-23234968 MS.gene024269:intron 55.0%
GGGCCATTCAGCACAGTATG+TGG - chr7.4:23236404-23236423 MS.gene024269:intron 55.0%
TGTCCCTTTCCCATAGGACC+CGG + chr7.4:23234943-23234962 None:intergenic 55.0%
! TGTCGGTGTCCCTTTCCCAT+AGG + chr7.4:23234949-23234968 None:intergenic 55.0%
!! AGTGGGCTATTTGGTGGGCT+TGG - chr7.4:23236893-23236912 MS.gene024269:intron 55.0%
!! GTGGGCTATTTGGTGGGCTT+GGG - chr7.4:23236894-23236913 MS.gene024269:intron 55.0%
GCCGCAGATTTCACCACCCC+AGG + chr7.4:23236953-23236972 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 23233797 23237276 23233797 ID=MS.gene024269
chr7.4 mRNA 23233797 23237276 23233797 ID=MS.gene024269.t1;Parent=MS.gene024269
chr7.4 exon 23237257 23237276 23237257 ID=MS.gene024269.t1.exon1;Parent=MS.gene024269.t1
chr7.4 CDS 23237257 23237276 23237257 ID=cds.MS.gene024269.t1;Parent=MS.gene024269.t1
chr7.4 exon 23237027 23237104 23237027 ID=MS.gene024269.t1.exon2;Parent=MS.gene024269.t1
chr7.4 CDS 23237027 23237104 23237027 ID=cds.MS.gene024269.t1;Parent=MS.gene024269.t1
chr7.4 exon 23234458 23234810 23234458 ID=MS.gene024269.t1.exon3;Parent=MS.gene024269.t1
chr7.4 CDS 23234458 23234810 23234458 ID=cds.MS.gene024269.t1;Parent=MS.gene024269.t1
chr7.4 exon 23233797 23234248 23233797 ID=MS.gene024269.t1.exon4;Parent=MS.gene024269.t1
chr7.4 CDS 23233797 23234248 23233797 ID=cds.MS.gene024269.t1;Parent=MS.gene024269.t1
Gene Sequence

>MS.gene024269

ATGCTCAGAACACTAGCCAGGTTCAATATACTCCAATAGTCATTCTTTTTTAATTTCAAACTTCCAAACAATTATTCTATATATATTTAGTTAATATAAGTATTCTGTCCTATATAGGCTTGTCTTTAGATAAAGATTGATAAGTACTACTTTAAATCTTTTATATATGCAGGGAGTTGAAGCTCACCAACTTCAGCAATGGTTTGGTTAAAAAACGCAGCAGATTCTATGCAACAGTTGGTGGAAGAAGGTAATAACTCTCATTAAAGCTCTTTACTATGGGTATCCATATTATGTGCAATTATAGTATTATCTGAATTCTTCATAAATGAATTGCACTAGTATTTTTTTTCCTTGATTCCCTGGTCCTGATTATGCTACTCTAAATGTACACTAAACTATAGGATAAAAGTATTCCAAAAATAAATAAACTATAGGATAAAAACTAGTCTTATATTTTTTTTTTTTAGCGTCTCATTTTAATCCCAACTTTCTTCTAAATTGACATGTATGAGTGGTTAGTGATTTGACCACATTGTAAAACTTTTGACACTGACAACATATATTCAACATTAATTAAACTCTAATAATTCCTCTCTTGTCTTAAATACAATAAAAAAATTGGCACTTAGCTATAACTTGTTTCAGATTTGTGTTAAGTATATGTTTTCAACACAGGTCTGCTTAGTGAGCTACCTATGTGAAGATAATTTGTTAGCTGTCAAAATAATTTGTTTTTTTGTTTTTTAATAAAACGATGAGTAGTTAGTAAAAAATTATTCATGATTTGTTATACATATGTGAAGATAATAATACCTTTTTTATTTATTTACAGTTGATATTATTAACCTTTTTAAGTGTACGTGTCTCTCACTTTAGAGGAGCCTAACTCGTGTACTTATTTGACATTTTGCTACTTTTTTTCTTTAATTTTTAATATCTATTTTATTGCTATATTATAACAATGAATCAAAAGTAATATAGGTTGAGTATAGCCGAATATGTTTGAATCAAAAGTAATATAGGTTATGACAGACTCTCACAACGTAAGGAACCAAATTATCCGAAATGAACTGAACTCATGAGAAACAAAATAAATAAATAAAGACAATATAAATTTTGTTGCGCTTTTTTGTGTTAACTCCGGGTCCTATGGGAAAGGGACACCGACATGGTAATTATAGTTCTTTTAAACAATTTATTTGGTGGAACTCATTACCCACTTGAATTCAATTTCATTTATATACAATTTTTTAATACGAATGAAAATAAAAAATAGGAGATGAATTAAGTACCATAAAATAATGAAACTAATGAAGAACAAATTTAAAAAAAAACGCAAGTGTAATTTTAGACCACTGTTTAATTCAATTTTATTTCATTTTCGTTGACAATTAAAAAGCAAGACACTGTAGTATAAACAAATATATATTGTACTATGTATGATCAGGAAAAATATACTTTAGTTAGAAACAATGGCAACGGATTTCTGTGAAACACATGGAACAAAACCCGCAAGCTTGCCTCCAATATGCATGTTCATATGCCATGGATTTAGCAAACATAAACAGCTATCATCATTTAATTGTCCACTTTTATTTTTTAATTGAACGTGTCCAATAACTCAACTAATGATTCTTTTGGCCTAGATTTCTAAACTAATCAATAATGAAGCCAAACATTGTAAAAAAAAAGTGAAATCAACTTTAGTCTATTTTTATGCAAAGAAAGTCCTTTTTGTTGTGTAGCCAAATTCAGGATCATAATCATTTTATGTTGACGTTTTATTTGATTTTGTTACAATTTTCTGCTATCCCTATCTCTTCAAGATAATAATTTGTGTGTCTCACAATCCATACTTTAAATACTTCGTCCATCCATTCATTTTTGTAAGCATATTTAACACTTAAGCATTTTTATAAGCATCTGGAGAAATCGAACATGAGATCTTGAGAGAAACACACCTCATAATTCCAAATTAAAGTAGTGAGACCTTGAGACAAGTTTATATTTGAAAGGGGACCTTCAATTAGCGATGAAGGATGGAGTCATGGAGTATCAATAAAAATGGAAAAAAGATGTCAATTTCTATATTCAAAATCAATCTTTGAACTTGAAAGTAACACAAATCTAAAGGTTCTTTTTTTCTTCCTCTTACTTTTCAAAGTCATTTAAGGAATATACAATCTTACAAAAAAATCTTGTTGGATAAATCTTCGGTCCACAACATCATCCTCCAACTTGTTGAAAAAGAAATGATGCTTTTGATTTAGACATTTGAAATAAAGCTGAAATAATTTACATTTAAATAATAAGCCATCATCAATCATTATTTATTTATTAGTGCTTCAATATTCACATTTCAAACCAAGCAACTCCTTTTGTCTTTCCCCCCATCTTTCTTTTCTCACACCCATGATGATTCTCATTCATTCAATTCAATTCATTTTTGGTTCCAAAAAGCAGGTTAGAAGGAAAAATTGCAATCATAACTGGATCAGCAAGTGGACTTGGAAAGGCAACAGCCCATGAATTTGTCCAACATGGGGCCCAAGTAATCATCGCCGACAACGACACTAAACTTGGGCCAAAAGTTGCAAAGGAATTGGGCCATTCAGCACAGTATGTGGAATGTGATGTCACTGTTGAGGCCCAAGTAGAAGAAGCAGTGAACTTTGCCATAACAAACTATGGTAAACTAGACATCATGTACAACAATGCTGGCATAACAGGACCAATAATCCCACCAAGCATAACAGAATTGGACCTTGATGAATTTGAGAAGGTCATGAGAATCAATGTAACAGGAGTTATTGCAGGTATATATTATCTTAAGAGAAAATACCAAAAAGAAAATAGAAAACAAAAACATAAGAAAAAATATGGGAGGACAAAAACCAAATTCATGTTAAATAAATTTAAGACCACCTTTAACTTAAAGTTGTAATCCTCTACTTGAGAAAATTTCATATATTTCCTAAGTTATATCTGTGATTTAGTTGTAACCACAGTAAACTCATCGTTGCAGGTATAAAACATGCGGCTCGAGTGATGATACCAAAGGGATATGGGTCCATTATATGTACATCAAGCATAAGTGGGCTATTTGGTGGGCTTGGGCCTCATCCTTACACAATATCGAAGTCTACAATACCTGGGGTGGTGAAATCTGCGGCTAGTGAACTATGTGGAGCTGGGATTAGAGTCAATTGCATATCACCAACTGCAATTCCTACACCAATGTCATTGTATCAAATTGGAAAGTTTATTCCTGGTGTGACCTATGAACAGATAGGGGAAATTGTTAGTGGACTTAGTGCTCTCAAAGGTGCCAAATGTGAGGACATTGATGTTGCTAGAGCTGCATTGTACTTGGCATCAGATGATGCTAAGTTTATCTCAGGTCAGAATCTCATAGTTGATGGAGGGTTCACTTCCATTAAAAATTTCGCGTTTCCTTCTCCGGATCAAATCGGTTAG
Protein sequence

>MS.gene024269.t1

MLRTLARELKLTNFSNGLVKKRSRFYATVGGRRLEGKIAIITGSASGLGKATAHEFVQHGAQVIIADNDTKLGPKVAKELGHSAQYVECDVTVEAQVEEAVNFAITNYGKLDIMYNNAGITGPIIPPSITELDLDEFEKVMRINVTGVIAGIKHAARVMIPKGYGSIICTSSISGLFGGLGPHPYTISKSTIPGVVKSAASELCGAGIRVNCISPTAIPTPMSLYQIGKFIPGVTYEQIGEIVSGLSALKGAKCEDIDVARAALYLASDDAKFISGQNLIVDGGFTSIKNFAFPSPDQIG