Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25674.t1 | XP_013450332.1 | 94.7 | 266 | 14 | 0 | 5 | 270 | 31 | 296 | 1.10E-138 | 502.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25674.t1 | F1SWA0 | 48.8 | 256 | 128 | 2 | 6 | 258 | 2 | 257 | 9.9e-64 | 245.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25674.t1 | A0A072UF24 | 94.7 | 266 | 14 | 0 | 5 | 270 | 31 | 296 | 7.9e-139 | 502.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25674.t1 | MTR_7g107670 | 94.030 | 268 | 16 | 0 | 5 | 272 | 31 | 298 | 0.0 | 521 |
MS.gene25674.t1 | MTR_3g113870 | 92.788 | 208 | 15 | 0 | 13 | 220 | 27 | 234 | 8.53e-141 | 395 |
MS.gene25674.t1 | MTR_7g083870 | 57.463 | 268 | 113 | 1 | 5 | 271 | 33 | 300 | 4.68e-112 | 325 |
MS.gene25674.t1 | MTR_7g071680 | 45.588 | 272 | 134 | 4 | 5 | 262 | 27 | 298 | 4.61e-84 | 254 |
MS.gene25674.t1 | MTR_4g052350 | 50.579 | 259 | 119 | 3 | 5 | 262 | 12 | 262 | 1.20e-83 | 252 |
MS.gene25674.t1 | MTR_4g052340 | 49.242 | 264 | 118 | 4 | 5 | 260 | 12 | 267 | 3.02e-80 | 243 |
MS.gene25674.t1 | MTR_4g052320 | 48.837 | 258 | 124 | 3 | 6 | 262 | 7 | 257 | 6.85e-80 | 242 |
MS.gene25674.t1 | MTR_4g052300 | 48.450 | 258 | 124 | 3 | 6 | 262 | 7 | 256 | 2.11e-76 | 233 |
MS.gene25674.t1 | MTR_7g105460 | 47.638 | 254 | 127 | 2 | 6 | 258 | 12 | 260 | 1.62e-72 | 223 |
MS.gene25674.t1 | MTR_7g110130 | 44.141 | 256 | 136 | 3 | 5 | 258 | 4 | 254 | 3.73e-72 | 222 |
MS.gene25674.t1 | MTR_4g078630 | 44.788 | 259 | 136 | 5 | 5 | 259 | 17 | 272 | 3.72e-70 | 218 |
MS.gene25674.t1 | MTR_7g105580 | 44.747 | 257 | 118 | 3 | 4 | 259 | 5 | 238 | 4.77e-70 | 216 |
MS.gene25674.t1 | MTR_3g020670 | 45.736 | 258 | 137 | 2 | 4 | 258 | 13 | 270 | 9.34e-69 | 214 |
MS.gene25674.t1 | MTR_2g090165 | 44.141 | 256 | 135 | 4 | 5 | 258 | 4 | 253 | 1.26e-68 | 213 |
MS.gene25674.t1 | MTR_7g110140 | 43.609 | 266 | 142 | 6 | 6 | 269 | 5 | 264 | 2.21e-64 | 202 |
MS.gene25674.t1 | MTR_7g105590 | 52.128 | 188 | 89 | 1 | 5 | 191 | 6 | 193 | 5.17e-62 | 194 |
MS.gene25674.t1 | MTR_7g110160 | 42.578 | 256 | 121 | 4 | 5 | 258 | 4 | 235 | 5.26e-62 | 196 |
MS.gene25674.t1 | MTR_6g023590 | 40.000 | 255 | 145 | 4 | 6 | 257 | 12 | 261 | 8.11e-62 | 196 |
MS.gene25674.t1 | MTR_6g035395 | 42.424 | 264 | 131 | 6 | 3 | 264 | 1 | 245 | 8.35e-62 | 195 |
MS.gene25674.t1 | MTR_6g023910 | 40.076 | 262 | 149 | 4 | 4 | 262 | 10 | 266 | 2.01e-61 | 195 |
MS.gene25674.t1 | MTR_6g023990 | 40.392 | 255 | 144 | 4 | 6 | 257 | 13 | 262 | 1.22e-60 | 193 |
MS.gene25674.t1 | MTR_6g023950 | 40.784 | 255 | 143 | 4 | 6 | 257 | 12 | 261 | 1.18e-58 | 188 |
MS.gene25674.t1 | MTR_6g023610 | 38.431 | 255 | 149 | 4 | 6 | 257 | 12 | 261 | 2.16e-57 | 185 |
MS.gene25674.t1 | MTR_6g023600 | 40.078 | 257 | 142 | 5 | 6 | 257 | 12 | 261 | 7.08e-56 | 181 |
MS.gene25674.t1 | MTR_6g023600 | 39.300 | 257 | 138 | 6 | 6 | 257 | 12 | 255 | 1.34e-51 | 169 |
MS.gene25674.t1 | MTR_7g105570 | 38.202 | 267 | 100 | 5 | 2 | 258 | 6 | 217 | 3.38e-50 | 165 |
MS.gene25674.t1 | MTR_4g084800 | 50.746 | 134 | 65 | 1 | 4 | 136 | 10 | 143 | 5.91e-40 | 136 |
MS.gene25674.t1 | MTR_3g085740 | 30.620 | 258 | 162 | 8 | 5 | 257 | 73 | 318 | 1.10e-29 | 114 |
MS.gene25674.t1 | MTR_4g132850 | 27.652 | 264 | 172 | 7 | 1 | 259 | 1 | 250 | 1.50e-25 | 101 |
MS.gene25674.t1 | MTR_1196s0010 | 29.572 | 257 | 154 | 7 | 9 | 257 | 276 | 513 | 6.63e-24 | 100 |
MS.gene25674.t1 | MTR_3g068155 | 28.626 | 262 | 171 | 8 | 3 | 260 | 17 | 266 | 4.05e-23 | 95.9 |
MS.gene25674.t1 | MTR_7g094510 | 29.057 | 265 | 164 | 9 | 4 | 257 | 3 | 254 | 4.95e-23 | 95.1 |
MS.gene25674.t1 | MTR_3g068070 | 27.068 | 266 | 166 | 7 | 3 | 258 | 13 | 260 | 1.02e-21 | 92.0 |
MS.gene25674.t1 | MTR_7g094520 | 26.437 | 261 | 176 | 5 | 4 | 257 | 8 | 259 | 7.10e-21 | 89.4 |
MS.gene25674.t1 | MTR_3g068085 | 26.718 | 262 | 166 | 6 | 7 | 258 | 15 | 260 | 1.95e-20 | 88.6 |
MS.gene25674.t1 | MTR_3g068065 | 27.237 | 257 | 173 | 7 | 7 | 259 | 17 | 263 | 2.65e-20 | 88.2 |
MS.gene25674.t1 | MTR_4g131740 | 28.679 | 265 | 165 | 9 | 4 | 256 | 37 | 289 | 1.79e-19 | 86.3 |
MS.gene25674.t1 | MTR_4g064887 | 27.099 | 262 | 171 | 7 | 3 | 258 | 13 | 260 | 3.16e-19 | 85.1 |
MS.gene25674.t1 | MTR_3g068175 | 26.718 | 262 | 172 | 7 | 3 | 258 | 15 | 262 | 3.26e-19 | 85.1 |
MS.gene25674.t1 | MTR_7g113650 | 26.493 | 268 | 166 | 8 | 4 | 256 | 37 | 288 | 5.08e-19 | 85.1 |
MS.gene25674.t1 | MTR_7g063330 | 29.278 | 263 | 169 | 7 | 3 | 259 | 13 | 264 | 2.81e-18 | 82.4 |
MS.gene25674.t1 | MTR_4g097510 | 29.082 | 196 | 136 | 2 | 8 | 202 | 3 | 196 | 3.33e-18 | 82.4 |
MS.gene25674.t1 | MTR_1g082760 | 25.940 | 266 | 170 | 7 | 4 | 256 | 37 | 288 | 1.07e-17 | 81.3 |
MS.gene25674.t1 | MTR_8g442750 | 30.112 | 269 | 153 | 8 | 7 | 257 | 14 | 265 | 2.27e-17 | 80.5 |
MS.gene25674.t1 | MTR_3g068175 | 26.316 | 266 | 172 | 8 | 3 | 258 | 15 | 266 | 2.41e-17 | 80.1 |
MS.gene25674.t1 | MTR_7g063260 | 28.897 | 263 | 171 | 7 | 3 | 259 | 14 | 266 | 5.81e-17 | 79.0 |
MS.gene25674.t1 | MTR_6g023940 | 27.041 | 196 | 82 | 3 | 6 | 200 | 12 | 147 | 6.56e-17 | 76.3 |
MS.gene25674.t1 | MTR_7g080410 | 31.443 | 194 | 123 | 5 | 7 | 192 | 38 | 229 | 9.76e-17 | 79.0 |
MS.gene25674.t1 | MTR_7g080410 | 31.443 | 194 | 123 | 5 | 7 | 192 | 38 | 229 | 1.26e-16 | 78.2 |
MS.gene25674.t1 | MTR_1g068955 | 28.731 | 268 | 152 | 7 | 7 | 255 | 14 | 261 | 1.27e-16 | 78.2 |
MS.gene25674.t1 | MTR_4g064883 | 24.436 | 266 | 173 | 7 | 3 | 258 | 12 | 259 | 1.30e-16 | 77.8 |
MS.gene25674.t1 | MTR_7g063270 | 28.358 | 268 | 165 | 7 | 3 | 259 | 14 | 265 | 3.18e-16 | 76.6 |
MS.gene25674.t1 | MTR_1g051165 | 25.926 | 270 | 174 | 8 | 5 | 258 | 12 | 271 | 3.82e-16 | 76.6 |
MS.gene25674.t1 | MTR_7g063320 | 29.151 | 271 | 156 | 9 | 3 | 257 | 13 | 263 | 6.92e-16 | 75.9 |
MS.gene25674.t1 | MTR_7g063390 | 29.008 | 262 | 170 | 8 | 3 | 258 | 14 | 265 | 1.03e-15 | 75.5 |
MS.gene25674.t1 | MTR_7g063360 | 28.626 | 262 | 171 | 8 | 3 | 258 | 14 | 265 | 1.73e-15 | 74.7 |
MS.gene25674.t1 | MTR_8g096580 | 28.641 | 206 | 133 | 7 | 4 | 201 | 42 | 241 | 4.73e-15 | 74.3 |
MS.gene25674.t1 | MTR_4g086400 | 26.259 | 278 | 159 | 12 | 12 | 270 | 9 | 259 | 6.80e-15 | 74.7 |
MS.gene25674.t1 | MTR_4g058810 | 28.788 | 264 | 165 | 9 | 7 | 258 | 11 | 263 | 7.33e-15 | 73.2 |
MS.gene25674.t1 | MTR_4g058840 | 27.969 | 261 | 171 | 9 | 7 | 258 | 11 | 263 | 1.96e-14 | 72.0 |
MS.gene25674.t1 | MTR_4g058820 | 27.969 | 261 | 171 | 9 | 7 | 258 | 11 | 263 | 1.96e-14 | 72.0 |
MS.gene25674.t1 | MTR_3g087850 | 28.962 | 183 | 121 | 4 | 11 | 190 | 30 | 206 | 2.75e-14 | 71.6 |
MS.gene25674.t1 | MTR_4g064887 | 28.283 | 198 | 130 | 5 | 3 | 194 | 13 | 204 | 9.10e-14 | 69.3 |
MS.gene25674.t1 | MTR_4g086410 | 29.231 | 195 | 123 | 4 | 12 | 192 | 9 | 202 | 1.34e-13 | 70.9 |
MS.gene25674.t1 | MTR_7g105560 | 55.932 | 59 | 22 | 1 | 4 | 62 | 10 | 64 | 9.27e-13 | 64.7 |
MS.gene25674.t1 | MTR_4g064883 | 26.396 | 197 | 137 | 5 | 3 | 195 | 12 | 204 | 1.43e-12 | 65.9 |
MS.gene25674.t1 | MTR_8g044240 | 27.179 | 195 | 132 | 4 | 13 | 197 | 75 | 269 | 1.76e-12 | 67.0 |
MS.gene25674.t1 | MTR_3g087860 | 26.627 | 169 | 116 | 3 | 24 | 190 | 29 | 191 | 4.55e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25674.t1 | AT4G03140 | 72.659 | 267 | 73 | 0 | 5 | 271 | 76 | 342 | 1.23e-144 | 409 |
MS.gene25674.t1 | AT3G26770 | 55.970 | 268 | 115 | 2 | 4 | 269 | 38 | 304 | 7.91e-110 | 320 |
MS.gene25674.t1 | AT3G26760 | 53.933 | 267 | 120 | 2 | 4 | 267 | 33 | 299 | 1.16e-106 | 311 |
MS.gene25674.t1 | AT3G51680 | 45.588 | 272 | 136 | 4 | 3 | 262 | 28 | 299 | 4.67e-77 | 236 |
MS.gene25674.t1 | AT2G47130 | 45.946 | 259 | 129 | 5 | 6 | 261 | 5 | 255 | 4.06e-75 | 229 |
MS.gene25674.t1 | AT3G29250 | 46.124 | 258 | 131 | 4 | 6 | 261 | 5 | 256 | 5.15e-74 | 227 |
MS.gene25674.t1 | AT2G47120 | 44.106 | 263 | 137 | 6 | 1 | 261 | 1 | 255 | 5.51e-74 | 227 |
MS.gene25674.t1 | AT2G47120 | 44.574 | 258 | 133 | 6 | 6 | 261 | 5 | 254 | 6.08e-74 | 227 |
MS.gene25674.t1 | AT3G29250 | 44.364 | 275 | 133 | 5 | 1 | 261 | 24 | 292 | 6.99e-74 | 228 |
MS.gene25674.t1 | AT3G29250 | 44.404 | 277 | 132 | 6 | 1 | 261 | 24 | 294 | 2.73e-73 | 226 |
MS.gene25674.t1 | AT3G29260 | 43.243 | 259 | 138 | 4 | 5 | 261 | 4 | 255 | 6.58e-71 | 219 |
MS.gene25674.t1 | AT1G52340 | 46.545 | 275 | 121 | 7 | 5 | 261 | 16 | 282 | 6.85e-67 | 209 |
MS.gene25674.t1 | AT2G47140 | 41.313 | 259 | 144 | 5 | 5 | 261 | 4 | 256 | 2.64e-66 | 207 |
MS.gene25674.t1 | AT3G42960 | 43.462 | 260 | 139 | 6 | 5 | 259 | 6 | 262 | 1.01e-62 | 198 |
MS.gene25674.t1 | AT2G47150 | 32.422 | 256 | 114 | 6 | 7 | 261 | 1 | 198 | 9.11e-32 | 116 |
MS.gene25674.t1 | AT1G07450 | 29.119 | 261 | 166 | 7 | 3 | 258 | 6 | 252 | 2.55e-24 | 98.6 |
MS.gene25674.t1 | AT5G18210 | 30.682 | 264 | 158 | 9 | 7 | 257 | 8 | 259 | 6.45e-24 | 97.8 |
MS.gene25674.t1 | AT1G24360 | 28.958 | 259 | 165 | 8 | 5 | 257 | 72 | 317 | 1.59e-23 | 97.8 |
MS.gene25674.t1 | AT5G06060 | 27.692 | 260 | 172 | 6 | 3 | 258 | 7 | 254 | 1.66e-23 | 96.7 |
MS.gene25674.t1 | AT2G29310 | 28.077 | 260 | 171 | 5 | 3 | 258 | 5 | 252 | 1.83e-23 | 96.7 |
MS.gene25674.t1 | AT2G29340 | 28.846 | 260 | 169 | 7 | 3 | 258 | 5 | 252 | 2.09e-23 | 96.3 |
MS.gene25674.t1 | AT2G29340 | 28.846 | 260 | 169 | 7 | 3 | 258 | 5 | 252 | 4.21e-23 | 96.3 |
MS.gene25674.t1 | AT1G63380 | 30.566 | 265 | 162 | 10 | 6 | 258 | 14 | 268 | 3.73e-22 | 93.2 |
MS.gene25674.t1 | AT1G63380 | 30.566 | 265 | 162 | 10 | 6 | 258 | 16 | 270 | 4.31e-22 | 93.2 |
MS.gene25674.t1 | AT1G63380 | 30.566 | 265 | 162 | 10 | 6 | 258 | 18 | 272 | 4.55e-22 | 93.2 |
MS.gene25674.t1 | AT1G63380 | 30.566 | 265 | 162 | 10 | 6 | 258 | 21 | 275 | 5.68e-22 | 92.8 |
MS.gene25674.t1 | AT4G05530 | 29.231 | 260 | 165 | 7 | 5 | 259 | 7 | 252 | 7.47e-22 | 92.0 |
MS.gene25674.t1 | AT2G30670 | 27.586 | 261 | 171 | 8 | 3 | 258 | 5 | 252 | 2.58e-21 | 90.9 |
MS.gene25674.t1 | AT1G62610 | 29.811 | 265 | 164 | 10 | 6 | 258 | 12 | 266 | 9.69e-21 | 89.4 |
MS.gene25674.t1 | AT1G62610 | 29.811 | 265 | 164 | 10 | 6 | 258 | 14 | 268 | 1.02e-20 | 89.4 |
MS.gene25674.t1 | AT1G62610 | 29.811 | 265 | 164 | 10 | 6 | 258 | 13 | 267 | 1.03e-20 | 89.4 |
MS.gene25674.t1 | AT1G62610 | 29.811 | 265 | 164 | 10 | 6 | 258 | 18 | 272 | 1.16e-20 | 89.4 |
MS.gene25674.t1 | AT2G29330 | 27.692 | 260 | 172 | 7 | 3 | 258 | 5 | 252 | 1.36e-20 | 88.6 |
MS.gene25674.t1 | AT2G29360 | 28.413 | 271 | 170 | 9 | 3 | 263 | 14 | 270 | 1.66e-20 | 88.6 |
MS.gene25674.t1 | AT1G54870 | 27.715 | 267 | 164 | 8 | 4 | 256 | 79 | 330 | 2.44e-20 | 89.4 |
MS.gene25674.t1 | AT1G54870 | 27.715 | 267 | 164 | 8 | 4 | 256 | 81 | 332 | 2.59e-20 | 89.4 |
MS.gene25674.t1 | AT2G17845 | 29.323 | 266 | 162 | 8 | 6 | 256 | 46 | 300 | 3.83e-20 | 88.6 |
MS.gene25674.t1 | AT3G55290 | 30.827 | 266 | 159 | 11 | 6 | 258 | 17 | 270 | 4.58e-20 | 87.8 |
MS.gene25674.t1 | AT3G55290 | 30.827 | 266 | 159 | 11 | 6 | 258 | 16 | 269 | 4.61e-20 | 87.8 |
MS.gene25674.t1 | AT2G29370 | 27.376 | 263 | 169 | 7 | 3 | 258 | 14 | 261 | 5.59e-20 | 87.0 |
MS.gene25674.t1 | AT2G29350 | 28.413 | 271 | 169 | 8 | 3 | 263 | 13 | 268 | 8.96e-20 | 86.7 |
MS.gene25674.t1 | AT5G18210 | 33.668 | 199 | 116 | 7 | 7 | 192 | 8 | 203 | 1.00e-19 | 86.7 |
MS.gene25674.t1 | AT2G29300 | 25.843 | 267 | 173 | 8 | 3 | 260 | 5 | 255 | 1.05e-19 | 86.3 |
MS.gene25674.t1 | AT2G29300 | 25.843 | 267 | 173 | 8 | 3 | 260 | 5 | 255 | 1.06e-19 | 86.7 |
MS.gene25674.t1 | AT2G29320 | 27.586 | 261 | 172 | 7 | 3 | 258 | 11 | 259 | 1.10e-19 | 86.3 |
MS.gene25674.t1 | AT1G07440 | 26.923 | 260 | 173 | 7 | 3 | 258 | 10 | 256 | 1.30e-19 | 86.3 |
MS.gene25674.t1 | AT2G29150 | 28.409 | 264 | 160 | 9 | 3 | 256 | 14 | 258 | 1.39e-19 | 86.3 |
MS.gene25674.t1 | AT3G55310 | 31.579 | 266 | 157 | 11 | 6 | 258 | 16 | 269 | 1.49e-19 | 86.3 |
MS.gene25674.t1 | AT3G03980 | 28.195 | 266 | 166 | 7 | 7 | 257 | 14 | 269 | 4.50e-19 | 84.7 |
MS.gene25674.t1 | AT3G46170 | 29.771 | 262 | 167 | 7 | 6 | 258 | 25 | 278 | 6.20e-19 | 84.7 |
MS.gene25674.t1 | AT4G13180 | 28.889 | 270 | 158 | 9 | 4 | 257 | 10 | 261 | 8.59e-18 | 81.3 |
MS.gene25674.t1 | AT3G04000 | 25.660 | 265 | 173 | 6 | 7 | 256 | 14 | 269 | 9.78e-18 | 81.3 |
MS.gene25674.t1 | AT1G49670 | 31.633 | 196 | 117 | 5 | 12 | 192 | 9 | 202 | 9.90e-18 | 83.2 |
MS.gene25674.t1 | AT1G49670 | 31.633 | 196 | 117 | 5 | 12 | 192 | 9 | 202 | 1.11e-17 | 83.2 |
MS.gene25674.t1 | AT2G29290 | 26.923 | 260 | 174 | 6 | 3 | 258 | 5 | 252 | 2.09e-17 | 80.1 |
MS.gene25674.t1 | AT2G29260 | 26.199 | 271 | 182 | 7 | 3 | 269 | 66 | 322 | 2.34e-17 | 80.9 |
MS.gene25674.t1 | AT3G05260 | 25.746 | 268 | 169 | 7 | 4 | 257 | 34 | 285 | 3.55e-17 | 79.7 |
MS.gene25674.t1 | AT2G29340 | 29.146 | 199 | 133 | 5 | 3 | 197 | 5 | 199 | 6.68e-17 | 77.4 |
MS.gene25674.t1 | AT2G29340 | 29.146 | 199 | 133 | 5 | 3 | 197 | 5 | 199 | 6.68e-17 | 77.4 |
MS.gene25674.t1 | AT2G29310 | 29.146 | 199 | 133 | 4 | 3 | 197 | 5 | 199 | 1.98e-16 | 76.3 |
MS.gene25674.t1 | AT1G10310 | 30.000 | 190 | 129 | 3 | 10 | 197 | 18 | 205 | 6.09e-16 | 75.5 |
MS.gene25674.t1 | AT2G29310 | 25.652 | 230 | 157 | 4 | 33 | 258 | 31 | 250 | 6.64e-16 | 75.9 |
MS.gene25674.t1 | AT3G12800 | 29.197 | 274 | 168 | 8 | 7 | 266 | 10 | 271 | 1.31e-15 | 75.5 |
MS.gene25674.t1 | AT2G29350 | 29.293 | 198 | 128 | 5 | 3 | 194 | 13 | 204 | 5.49e-15 | 72.8 |
MS.gene25674.t1 | AT2G29350 | 26.638 | 229 | 150 | 6 | 40 | 263 | 15 | 230 | 2.96e-14 | 70.9 |
MS.gene25674.t1 | AT3G47350 | 28.283 | 198 | 135 | 5 | 10 | 203 | 47 | 241 | 5.88e-14 | 70.9 |
MS.gene25674.t1 | AT3G47350 | 28.283 | 198 | 135 | 5 | 10 | 203 | 47 | 241 | 7.21e-14 | 70.9 |
MS.gene25674.t1 | AT5G65205 | 28.436 | 211 | 140 | 5 | 8 | 213 | 7 | 211 | 9.38e-14 | 70.1 |
MS.gene25674.t1 | AT5G04900 | 27.320 | 194 | 132 | 3 | 13 | 197 | 83 | 276 | 2.36e-13 | 69.7 |
MS.gene25674.t1 | AT5G50600 | 29.126 | 206 | 128 | 9 | 3 | 201 | 41 | 235 | 5.65e-12 | 65.5 |
MS.gene25674.t1 | AT5G50700 | 29.126 | 206 | 128 | 9 | 3 | 201 | 41 | 235 | 5.65e-12 | 65.5 |
MS.gene25674.t1 | AT3G03330 | 26.804 | 194 | 133 | 4 | 7 | 192 | 41 | 233 | 6.74e-12 | 65.1 |
MS.gene25674.t1 | AT2G29290 | 24.545 | 220 | 153 | 5 | 40 | 258 | 28 | 235 | 1.75e-11 | 63.2 |
Find 0 sgRNAs with CRISPR-Local
Find 67 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AAGTTGTTTGTATTCAGAAA+TGG | - | 51705:2243-2262 | None:intergenic | 25.0% |
! | ATATCATGTATAACAATGCA+GGG | + | 51705:2264-2283 | MS.gene25674:CDS | 25.0% |
! | GCAACAAAATTCATCAATAA+TGG | + | 51705:2086-2105 | MS.gene25674:CDS | 25.0% |
! | TTTCACATCTTTCAAGAATT+TGG | + | 51705:2778-2797 | MS.gene25674:CDS | 25.0% |
GATATCATGTATAACAATGC+AGG | + | 51705:2263-2282 | MS.gene25674:CDS | 30.0% | |
GTAGAAATTGTTCGTAATGT+TGG | + | 51705:2644-2663 | MS.gene25674:CDS | 30.0% | |
TGTCAAAAGATTCTAGATTG+AGG | - | 51705:2322-2341 | None:intergenic | 30.0% | |
! | AGAATCTTTTGACAAAGTCA+TGG | + | 51705:2328-2347 | MS.gene25674:CDS | 30.0% |
! | TATAGGCATTGTTAAATCCA+TGG | + | 51705:2502-2521 | MS.gene25674:CDS | 30.0% |
AAAGGAGTAGGAATAGCAAA+AGG | - | 51705:2572-2591 | None:intergenic | 35.0% | |
AAGGCGATATACAATTGACT+CGG | - | 51705:2553-2572 | None:intergenic | 35.0% | |
AATGATGCTAGGTATATCAG+CGG | + | 51705:2731-2750 | MS.gene25674:CDS | 35.0% | |
ATACTCTGTATCCAAGTTTG+CGG | + | 51705:2478-2497 | MS.gene25674:CDS | 35.0% | |
CAAGAAACTGCAAAAGAACT+AGG | + | 51705:2149-2168 | MS.gene25674:CDS | 35.0% | |
CAAGTTATGAAGGTAGCATT+AGG | - | 51705:2176-2195 | None:intergenic | 35.0% | |
GTCATGGAAATAAATGTTCG+CGG | + | 51705:2344-2363 | MS.gene25674:CDS | 35.0% | |
TGCAGCATTAGCAATATCAT+CGG | - | 51705:2696-2715 | None:intergenic | 35.0% | |
!! | CTAGTTCTTTTGCAGTTTCT+TGG | - | 51705:2151-2170 | None:intergenic | 35.0% |
AATAAATGTTCGCGGCGTTA+TGG | + | 51705:2352-2371 | MS.gene25674:CDS | 40.0% | |
AATGCCTATAACCGCAAACT+TGG | - | 51705:2492-2511 | None:intergenic | 40.0% | |
ACCTAGCATCATTAGATGCA+AGG | - | 51705:2724-2743 | None:intergenic | 40.0% | |
ACCTTGCATCTAATGATGCT+AGG | + | 51705:2720-2739 | MS.gene25674:CDS | 40.0% | |
ATGATGCTAGGTATATCAGC+GGG | + | 51705:2732-2751 | MS.gene25674:CDS | 40.0% | |
CATAATTTGGTTGTGGATGG+AGG | + | 51705:2755-2774 | MS.gene25674:CDS | 40.0% | |
GCAGCATTAGCAATATCATC+GGG | - | 51705:2695-2714 | None:intergenic | 40.0% | |
GCTGATATCCAACAACAACT+TGG | + | 51705:2125-2144 | MS.gene25674:CDS | 40.0% | |
GTATATCAGCGGGCATAATT+TGG | + | 51705:2742-2761 | MS.gene25674:CDS | 40.0% | |
GTATCCAAGTTTGCGGTTAT+AGG | + | 51705:2485-2504 | MS.gene25674:CDS | 40.0% | |
TCCATTTCGCTCATGACAAA+AGG | - | 51705:2590-2609 | None:intergenic | 40.0% | |
TTTCTTGGCCAAGTTGTTGT+TGG | - | 51705:2136-2155 | None:intergenic | 40.0% | |
! | TCCTTTTGTCATGAGCGAAA+TGG | + | 51705:2586-2605 | MS.gene25674:CDS | 40.0% |
!! | ACAAGGTAGCACTGATAACT+GGG | + | 51705:2036-2055 | MS.gene25674:CDS | 40.0% |
AGATTGAGGTCAACAACGCT+TGG | - | 51705:2308-2327 | None:intergenic | 45.0% | |
GGGCATAATTTGGTTGTGGA+TGG | + | 51705:2752-2771 | MS.gene25674:CDS | 45.0% | |
GTTCACAATTCGCTCCTTTC+AGG | - | 51705:2673-2692 | None:intergenic | 45.0% | |
TAATGCACTTGATCTGGTGC+AGG | - | 51705:2809-2828 | None:intergenic | 45.0% | |
TACCTTGTCTTGTAGCTTCC+TGG | - | 51705:2024-2043 | None:intergenic | 45.0% | |
TCGCTCATGACAAAAGGAGT+AGG | - | 51705:2584-2603 | None:intergenic | 45.0% | |
TGTGACGTCGCAAGTTATGA+AGG | - | 51705:2186-2205 | None:intergenic | 45.0% | |
! | AACGCTTGGAGGAGTTTTAC+AGG | - | 51705:2294-2313 | None:intergenic | 45.0% |
! | ACGCTTGGAGGAGTTTTACA+GGG | - | 51705:2293-2312 | None:intergenic | 45.0% |
! | CGTAATGTTGGTGTCCTGAA+AGG | + | 51705:2656-2675 | MS.gene25674:CDS | 45.0% |
!! | AAGGTAGCACTGATAACTGG+GGG | + | 51705:2038-2057 | MS.gene25674:CDS | 45.0% |
!! | CAAGGTAGCACTGATAACTG+GGG | + | 51705:2037-2056 | MS.gene25674:CDS | 45.0% |
!! | GACAAGGTAGCACTGATAAC+TGG | + | 51705:2035-2054 | MS.gene25674:CDS | 45.0% |
AGAATGGATCCAGTTCCACG+CGG | - | 51705:2410-2429 | None:intergenic | 50.0% | |
AGTCGCTGCAAGTCAAGATG+TGG | - | 51705:2623-2642 | None:intergenic | 50.0% | |
CAGCGGGCATAATTTGGTTG+TGG | + | 51705:2748-2767 | MS.gene25674:CDS | 50.0% | |
GTCCAGGAAGCTACAAGACA+AGG | + | 51705:2019-2038 | MS.gene25674:CDS | 50.0% | |
TTGAGGTCAACAACGCTTGG+AGG | - | 51705:2305-2324 | None:intergenic | 50.0% | |
!! | ATTGACTCGGATTCCATGCC+TGG | - | 51705:2540-2559 | None:intergenic | 50.0% |
AATGTTCGCGGCGTTATGGC+TGG | + | 51705:2356-2375 | MS.gene25674:CDS | 55.0% | |
ACTGGGGGAGCTAGTGGAAT+AGG | + | 51705:2053-2072 | MS.gene25674:CDS | 55.0% | |
AGCGTCACTGGTGTGATTGG+AGG | + | 51705:2440-2459 | MS.gene25674:CDS | 55.0% | |
CACTGGTGTGATTGGAGGGA+TGG | + | 51705:2445-2464 | MS.gene25674:CDS | 55.0% | |
CCATGGCTTCAGAGCTATCC+AGG | + | 51705:2519-2538 | MS.gene25674:CDS | 55.0% | |
CTGATAACTGGGGGAGCTAG+TGG | + | 51705:2047-2066 | MS.gene25674:CDS | 55.0% | |
GAATGGATCCAGTTCCACGC+GGG | - | 51705:2409-2428 | None:intergenic | 55.0% | |
GACGCTGGCAGTGCATAGAA+TGG | - | 51705:2426-2445 | None:intergenic | 55.0% | |
GCGTCACTGGTGTGATTGGA+GGG | + | 51705:2441-2460 | MS.gene25674:CDS | 55.0% | |
GCTTCAGAGCTATCCAGGCA+TGG | + | 51705:2524-2543 | MS.gene25674:CDS | 55.0% | |
GTAATGATCCCGCGTGGAAC+TGG | + | 51705:2398-2417 | MS.gene25674:CDS | 55.0% | |
TCCAATCACACCAGTGACGC+TGG | - | 51705:2441-2460 | None:intergenic | 55.0% | |
!! | CCTGGATAGCTCTGAAGCCA+TGG | - | 51705:2522-2541 | None:intergenic | 55.0% |
CTATGCACTGCCAGCGTCAC+TGG | + | 51705:2428-2447 | MS.gene25674:CDS | 60.0% | |
GCCAGCGTCACTGGTGTGAT+TGG | + | 51705:2437-2456 | MS.gene25674:CDS | 60.0% | |
GCGCGTGTAATGATCCCGCG+TGG | + | 51705:2392-2411 | MS.gene25674:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
51705 | gene | 2011 | 2829 | 2011 | ID=MS.gene25674 |
51705 | mRNA | 2011 | 2829 | 2011 | ID=MS.gene25674.t1;Parent=MS.gene25674 |
51705 | exon | 2011 | 2829 | 2011 | ID=MS.gene25674.t1.exon1;Parent=MS.gene25674.t1 |
51705 | CDS | 2011 | 2829 | 2011 | ID=cds.MS.gene25674.t1;Parent=MS.gene25674.t1 |
Gene Sequence |
Protein sequence |