AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene07096


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07096.t1 MTR_7g110130 93.962 265 16 0 1 265 1 265 0.0 500
MS.gene07096.t1 MTR_2g090165 81.132 265 49 1 1 265 1 264 7.06e-157 437
MS.gene07096.t1 MTR_7g110160 79.767 257 33 1 1 257 1 238 5.21e-143 401
MS.gene07096.t1 MTR_7g110140 70.155 258 76 1 1 258 1 257 2.00e-129 367
MS.gene07096.t1 MTR_6g035395 61.538 260 86 2 3 262 2 247 1.98e-107 311
MS.gene07096.t1 MTR_6g023590 49.402 251 126 1 5 254 12 262 5.71e-83 249
MS.gene07096.t1 MTR_6g023950 50.598 251 123 1 5 254 12 262 3.55e-81 245
MS.gene07096.t1 MTR_4g052340 49.804 255 124 2 4 258 12 262 4.44e-79 240
MS.gene07096.t1 MTR_6g023610 49.600 250 125 1 5 253 12 261 9.03e-79 239
MS.gene07096.t1 MTR_7g105460 50.593 253 124 1 5 257 12 263 1.30e-78 239
MS.gene07096.t1 MTR_4g052320 49.042 261 128 3 2 260 4 261 7.31e-78 236
MS.gene07096.t1 MTR_4g052350 49.804 255 124 2 4 258 12 262 3.97e-77 235
MS.gene07096.t1 MTR_6g023910 48.617 253 129 1 2 253 9 261 6.71e-77 234
MS.gene07096.t1 MTR_6g023600 48.207 251 129 1 5 254 12 262 7.93e-77 234
MS.gene07096.t1 MTR_6g023990 47.104 259 132 2 1 254 5 263 1.38e-76 233
MS.gene07096.t1 MTR_7g071680 47.842 278 124 4 2 260 25 300 3.68e-76 233
MS.gene07096.t1 MTR_4g052300 48.659 261 128 3 2 260 4 260 4.79e-75 229
MS.gene07096.t1 MTR_6g023600 47.809 251 124 2 5 254 12 256 3.08e-73 224
MS.gene07096.t1 MTR_7g083870 46.840 269 134 6 4 265 33 299 1.89e-70 219
MS.gene07096.t1 MTR_7g107670 44.141 256 136 3 4 254 31 284 3.06e-70 218
MS.gene07096.t1 MTR_7g105580 45.525 257 120 3 4 259 6 243 2.65e-67 209
MS.gene07096.t1 MTR_4g078630 44.403 268 137 4 1 260 14 277 8.07e-66 206
MS.gene07096.t1 MTR_3g020670 47.510 261 129 3 4 257 14 273 1.14e-65 206
MS.gene07096.t1 MTR_7g105590 50.265 189 93 1 4 192 6 193 2.87e-57 182
MS.gene07096.t1 MTR_7g105570 39.464 261 102 4 2 258 13 221 3.54e-49 162
MS.gene07096.t1 MTR_3g113870 45.055 182 98 2 14 195 29 208 5.83e-48 159
MS.gene07096.t1 MTR_4g084800 50.360 139 69 0 4 142 11 149 3.06e-41 139
MS.gene07096.t1 MTR_4g058840 30.855 269 146 8 6 252 11 261 6.65e-24 97.8
MS.gene07096.t1 MTR_4g058820 30.855 269 146 8 6 252 11 261 6.65e-24 97.8
MS.gene07096.t1 MTR_4g058810 29.740 269 149 8 6 252 11 261 6.10e-20 87.0
MS.gene07096.t1 MTR_7g113650 27.925 265 170 8 5 258 39 293 6.96e-20 87.0
MS.gene07096.t1 MTR_1g051165 28.253 269 168 7 4 255 12 272 4.70e-19 84.7
MS.gene07096.t1 MTR_3g085740 26.616 263 163 10 4 253 73 318 5.17e-19 85.1
MS.gene07096.t1 MTR_4g131740 28.185 259 167 8 5 252 39 289 1.02e-18 84.0
MS.gene07096.t1 MTR_1196s0010 30.709 254 160 8 4 253 272 513 4.63e-18 83.6
MS.gene07096.t1 MTR_4g132850 29.804 255 165 7 4 254 5 249 4.80e-18 81.3
MS.gene07096.t1 MTR_1g082760 28.253 269 162 9 5 257 39 292 5.55e-18 82.0
MS.gene07096.t1 MTR_7g105560 66.071 56 19 0 4 59 11 66 1.94e-16 74.7
MS.gene07096.t1 MTR_4g064887 26.923 260 175 8 2 255 11 261 9.19e-15 72.4
MS.gene07096.t1 MTR_3g068070 28.462 260 171 9 2 255 11 261 9.22e-15 72.4
MS.gene07096.t1 MTR_8g442750 28.295 258 169 9 6 253 14 265 1.60e-13 69.3
MS.gene07096.t1 MTR_3g068175 29.008 262 169 8 1 255 12 263 1.79e-13 68.9
MS.gene07096.t1 MTR_7g094520 27.843 255 171 6 6 253 11 259 2.24e-13 68.6
MS.gene07096.t1 MTR_3g068155 28.077 260 172 9 3 256 16 266 2.65e-13 68.6
MS.gene07096.t1 MTR_3g068065 26.772 254 173 7 6 254 17 262 6.54e-13 67.4
MS.gene07096.t1 MTR_3g068085 26.378 254 176 6 6 255 15 261 1.80e-12 66.2
MS.gene07096.t1 MTR_4g064887 28.856 201 131 6 2 196 11 205 3.37e-12 64.7
MS.gene07096.t1 MTR_4g086400 27.488 211 124 5 8 198 6 207 3.44e-12 66.6
MS.gene07096.t1 MTR_4g097510 26.842 190 134 4 7 195 3 188 5.46e-12 64.7
MS.gene07096.t1 MTR_4g086410 28.910 211 121 5 8 198 6 207 6.58e-12 65.5
MS.gene07096.t1 MTR_7g076660 39.560 91 51 2 9 95 8 98 4.26e-11 62.4
MS.gene07096.t1 MTR_7g076660 38.462 91 52 2 9 95 7 97 8.16e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene07096.t1 AT2G47140 62.500 256 95 1 1 256 1 255 1.43e-112 324
MS.gene07096.t1 AT3G29250 57.588 257 108 1 1 257 1 256 1.77e-100 294
MS.gene07096.t1 AT3G29250 57.588 257 108 1 1 257 37 292 3.31e-100 295
MS.gene07096.t1 AT3G29250 57.255 255 108 1 3 257 41 294 1.74e-99 293
MS.gene07096.t1 AT2G47130 56.589 258 110 2 1 258 1 256 5.58e-99 290
MS.gene07096.t1 AT3G29260 57.364 258 106 3 1 257 1 255 2.45e-97 286
MS.gene07096.t1 AT2G47120 55.000 260 110 4 1 258 1 255 9.80e-96 282
MS.gene07096.t1 AT2G47120 55.294 255 107 4 5 257 6 255 4.14e-95 280
MS.gene07096.t1 AT3G51680 48.897 272 124 3 4 260 30 301 1.92e-73 227
MS.gene07096.t1 AT1G52340 45.455 264 133 3 4 257 16 278 6.14e-67 209
MS.gene07096.t1 AT3G26760 41.509 265 145 4 2 258 32 294 9.84e-66 207
MS.gene07096.t1 AT4G03140 42.692 260 142 3 4 258 76 333 8.08e-65 206
MS.gene07096.t1 AT3G26770 43.939 264 132 6 4 257 39 296 2.68e-62 198
MS.gene07096.t1 AT3G42960 46.415 265 123 7 2 254 4 261 3.62e-57 184
MS.gene07096.t1 AT2G47150 33.456 272 87 6 6 257 1 198 2.90e-35 125
MS.gene07096.t1 AT1G07450 30.233 258 170 7 1 255 3 253 6.30e-20 86.7
MS.gene07096.t1 AT3G55290 29.231 260 162 8 6 252 18 268 6.56e-20 87.0
MS.gene07096.t1 AT3G55290 29.231 260 162 8 6 252 17 267 6.86e-20 87.0
MS.gene07096.t1 AT2G29310 28.682 258 171 7 3 255 4 253 1.45e-19 85.9
MS.gene07096.t1 AT1G62610 29.231 260 163 6 6 252 15 266 2.19e-19 85.5
MS.gene07096.t1 AT1G62610 29.231 260 163 6 6 252 14 265 2.24e-19 85.5
MS.gene07096.t1 AT1G62610 29.231 260 163 6 6 252 13 264 2.74e-19 85.1
MS.gene07096.t1 AT1G62610 29.231 260 163 6 6 252 19 270 2.90e-19 85.5
MS.gene07096.t1 AT2G29340 28.846 260 168 7 3 255 4 253 8.24e-19 83.6
MS.gene07096.t1 AT2G29340 28.462 260 169 7 3 255 4 253 1.15e-18 84.0
MS.gene07096.t1 AT1G63380 29.434 265 156 9 6 252 15 266 7.33e-18 81.3
MS.gene07096.t1 AT1G63380 29.104 268 159 9 6 255 19 273 7.36e-18 81.6
MS.gene07096.t1 AT1G63380 29.104 268 159 9 6 255 17 271 8.33e-18 81.3
MS.gene07096.t1 AT2G29150 30.534 262 162 9 2 255 12 261 8.92e-18 80.9
MS.gene07096.t1 AT3G55310 28.846 260 163 8 6 252 17 267 9.02e-18 81.3
MS.gene07096.t1 AT1G63380 29.434 265 156 9 6 252 22 273 9.62e-18 81.3
MS.gene07096.t1 AT2G29360 28.839 267 159 9 3 255 13 262 2.41e-17 79.7
MS.gene07096.t1 AT2G29290 29.963 267 156 7 3 255 4 253 3.51e-17 79.3
MS.gene07096.t1 AT2G17845 27.985 268 166 8 6 256 47 304 6.34e-17 79.3
MS.gene07096.t1 AT3G46170 27.907 258 168 7 6 252 26 276 4.57e-16 76.6
MS.gene07096.t1 AT1G24360 25.969 258 175 8 4 255 72 319 5.38e-16 76.6
MS.gene07096.t1 AT2G30670 27.132 258 175 6 3 255 4 253 4.86e-15 73.2
MS.gene07096.t1 AT2G29350 28.358 268 160 10 2 255 11 260 4.98e-15 73.6
MS.gene07096.t1 AT2G29340 28.641 206 133 5 3 201 4 202 6.08e-15 72.0
MS.gene07096.t1 AT2G29340 28.641 206 133 5 3 201 4 202 6.08e-15 72.0
MS.gene07096.t1 AT1G54870 26.415 265 174 8 5 258 83 337 8.44e-15 73.6
MS.gene07096.t1 AT1G54870 26.415 265 174 8 5 258 81 335 9.17e-15 73.6
MS.gene07096.t1 AT5G06060 30.038 263 161 9 3 255 6 255 2.78e-14 71.2
MS.gene07096.t1 AT1G07440 27.715 267 161 9 3 255 9 257 2.87e-14 71.2
MS.gene07096.t1 AT4G05530 31.008 258 158 8 4 254 7 251 4.36e-14 70.5
MS.gene07096.t1 AT1G49670 29.524 210 119 5 7 196 5 205 5.02e-14 72.0
MS.gene07096.t1 AT2G29300 28.352 261 169 10 3 255 4 254 5.46e-14 70.5
MS.gene07096.t1 AT1G49670 29.524 210 119 5 7 196 5 205 5.80e-14 72.0
MS.gene07096.t1 AT2G29300 27.444 266 175 10 3 260 4 259 7.23e-14 70.5
MS.gene07096.t1 AT3G05260 26.336 262 172 8 5 255 36 287 1.27e-13 69.7
MS.gene07096.t1 AT2G29290 29.954 217 132 6 42 255 37 236 1.48e-13 68.9
MS.gene07096.t1 AT4G13180 28.679 265 160 7 6 255 13 263 7.75e-13 67.0
MS.gene07096.t1 AT5G18210 28.839 267 156 8 6 253 8 259 1.72e-12 66.2
MS.gene07096.t1 AT2G29350 27.570 214 134 8 45 255 27 222 4.15e-11 61.6

Find 57 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGAAAGGAATTACATTAA+AGG 0.203968 7.2:+6336283 MS.gene07096:CDS
GACTGATCCACGAACATTAA+TGG 0.261085 7.2:-6335976 None:intergenic
AGCAGATATCAATGATGAAT+TGG 0.283540 7.2:+6335746 MS.gene07096:CDS
AATCATCAATGTCGAGAAAA+AGG 0.290314 7.2:+6335419 None:intergenic
AGTGTAGCTGCTTCTGTTGC+TGG 0.306606 7.2:+6336068 MS.gene07096:CDS
GTGAAGACATTCGTGGAAAA+TGG 0.309291 7.2:+6335708 MS.gene07096:CDS
ACATCCAAACATGGTCTCTT+AGG 0.311178 7.2:+6336113 MS.gene07096:CDS
TTATATTAGTGGACACAATT+TGG 0.312298 7.2:+6336355 MS.gene07096:CDS
CACCAAGTTGCTACAACAAT+TGG 0.313612 7.2:+6335771 MS.gene07096:CDS
TACACTGGCAGTACAAATTA+TGG 0.348031 7.2:-6336051 None:intergenic
GTTGCTAAACATAATGTCTA+AGG 0.368211 7.2:-6335883 None:intergenic
GCTGCTTCTGTTGCTGGAAC+TGG 0.384524 7.2:+6336074 MS.gene07096:CDS
TTATCATAGGTTGGAGGGTA+AGG 0.422520 7.2:+6335641 MS.gene07096:intron
GAAGAATCAGCTTATATTAG+TGG 0.431042 7.2:+6336344 MS.gene07096:CDS
TGCGGTGAGCTTGGAGCTTA+CGG 0.431271 7.2:+6336152 MS.gene07096:CDS
CGTTCAACGTGCGGTGAGCT+TGG 0.449623 7.2:+6336143 MS.gene07096:CDS
GCAGATATCAATGATGAATT+GGG 0.463215 7.2:+6335747 MS.gene07096:CDS
AAGTCCTAAGAGACCATGTT+TGG 0.467093 7.2:-6336117 None:intergenic
ACCCAATTGTTGTAGCAACT+TGG 0.467514 7.2:-6335773 None:intergenic
TTTAGCAACGCTGGAATTGA+AGG 0.468853 7.2:+6335897 MS.gene07096:CDS
AATGATTCTGCTAATTTGAA+AGG 0.470724 7.2:+6336269 MS.gene07096:CDS
CACGAATGTCTTCACTGTCT+CGG 0.471132 7.2:-6335700 None:intergenic
AGCTGCTCTCTTTCTTGCAT+CGG 0.473087 7.2:+6336322 MS.gene07096:CDS
ACCAAGTTGCTACAACAATT+GGG 0.482213 7.2:+6335772 MS.gene07096:CDS
CAAGCACGCTGCACGTATCA+TGG 0.486933 7.2:+6336007 MS.gene07096:CDS
GACATTATGTTTAGCAACGC+TGG 0.491704 7.2:+6335888 MS.gene07096:CDS
GGTAAGGTTGCTATAGTGAC+TGG 0.496701 7.2:+6335657 MS.gene07096:CDS
AACATGGCCATTAATGTTCG+TGG 0.507255 7.2:+6335969 MS.gene07096:CDS
CACAATTTGGTGGTCGATGG+AGG 0.510608 7.2:+6336368 MS.gene07096:CDS
GTGAGTGAAGTTGAAGCTAT+GGG 0.510902 7.2:+6336245 MS.gene07096:CDS
CACGCTGCACGTATCATGGT+GGG 0.533620 7.2:+6336011 MS.gene07096:CDS
AGAGGCGTGGCAACAGCATA+CGG 0.535077 7.2:-6336197 None:intergenic
AGCAACAGAAGCAGCTACAC+TGG 0.548413 7.2:-6336066 None:intergenic
GCTTCTGTTGCTGGAACTGG+TGG 0.550638 7.2:+6336077 MS.gene07096:CDS
AGTTGCTACAACAATTGGGT+TGG 0.551015 7.2:+6335776 MS.gene07096:CDS
GGTGAGTGAAGTTGAAGCTA+TGG 0.560707 7.2:+6336244 MS.gene07096:CDS
TATTAGTGGACACAATTTGG+TGG 0.561555 7.2:+6336358 MS.gene07096:CDS
GGACACAATTTGGTGGTCGA+TGG 0.563116 7.2:+6336365 MS.gene07096:CDS
CGAGACAGTGAAGACATTCG+TGG 0.564162 7.2:+6335701 MS.gene07096:CDS
GGAAACAGTAGCTTTCGCAT+TGG 0.572052 7.2:+6335848 MS.gene07096:CDS
TGCATGTAGAGCACTGAACA+TGG 0.590712 7.2:+6336220 MS.gene07096:CDS
GTAAGGTTGCTATAGTGACT+GGG 0.597391 7.2:+6335658 MS.gene07096:CDS
TTCAGTGCTCTACATGCAAG+AGG 0.603585 7.2:-6336215 None:intergenic
GATTATGTCACATCCAAACA+TGG 0.609752 7.2:+6336104 MS.gene07096:CDS
TGCTCTACATGCAAGAGGCG+TGG 0.617171 7.2:-6336210 None:intergenic
CATCTCTCACATCACAATGG+TGG 0.624448 7.2:-6335812 None:intergenic
GCACGCTGCACGTATCATGG+TGG 0.626246 7.2:+6336010 MS.gene07096:CDS
TTTCATCTCTCACATCACAA+TGG 0.636508 7.2:-6335815 None:intergenic
AGCAACGCTGGAATTGAAGG+TGG 0.637971 7.2:+6335900 MS.gene07096:CDS
GGACTTGTACGTTCAACGTG+CGG 0.641327 7.2:+6336134 MS.gene07096:CDS
CAGTACAAATTATGGATCCG+CGG 0.653793 7.2:-6336043 None:intergenic
TGAGTGAAGTTGAAGCTATG+GGG 0.654036 7.2:+6336246 MS.gene07096:CDS
GAATGAATTTGACAACAACA+TGG 0.663292 7.2:+6335953 MS.gene07096:CDS
TAAGGTTGCTATAGTGACTG+GGG 0.680742 7.2:+6335659 MS.gene07096:CDS
ACGCTGCACGTATCATGGTG+GGG 0.693738 7.2:+6336012 MS.gene07096:CDS
AAGGTTGCTATAGTGACTGG+GGG 0.716926 7.2:+6335660 MS.gene07096:CDS
ATGTAGAGCACTGAACATGG+AGG 0.811309 7.2:+6336223 MS.gene07096:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTTAATTAATTTTATCAT+AGG + chr7.2:6335628-6335647 MS.gene07096:intron 10.0%
!!! TAATTAATTTTATCATAGGT+TGG + chr7.2:6335632-6335651 MS.gene07096:intron 15.0%
!! TTATTAGGATATATTCATGT+GGG - chr7.2:6335548-6335567 None:intergenic 20.0%
!! TTTGAAAGGAATTACATTAA+AGG + chr7.2:6336283-6336302 MS.gene07096:CDS 20.0%
!!! GATTTAACCTTTTTGAAAAT+TGG + chr7.2:6335502-6335521 MS.gene07096:intron 20.0%
! AATGATTCTGCTAATTTGAA+AGG + chr7.2:6336269-6336288 MS.gene07096:CDS 25.0%
! CAAAATTTCACCTAATAAGA+TGG - chr7.2:6335480-6335499 None:intergenic 25.0%
! CATGTAGTAATGTTCTTATT+AGG - chr7.2:6335563-6335582 None:intergenic 25.0%
! CTTATTAGGATATATTCATG+TGG - chr7.2:6335549-6335568 None:intergenic 25.0%
! TGTATTCATGCAACATAAAT+AGG - chr7.2:6335598-6335617 None:intergenic 25.0%
!! TTATATTAGTGGACACAATT+TGG + chr7.2:6336355-6336374 MS.gene07096:CDS 25.0%
!!! TAATTTTATCATAGGTTGGA+GGG + chr7.2:6335636-6335655 MS.gene07096:intron 25.0%
!!! TTAATTTTATCATAGGTTGG+AGG + chr7.2:6335635-6335654 MS.gene07096:intron 25.0%
AGCAGATATCAATGATGAAT+TGG + chr7.2:6335746-6335765 MS.gene07096:CDS 30.0%
GAAGAATCAGCTTATATTAG+TGG + chr7.2:6336344-6336363 MS.gene07096:CDS 30.0%
GAATGAATTTGACAACAACA+TGG + chr7.2:6335953-6335972 MS.gene07096:CDS 30.0%
GCAGATATCAATGATGAATT+GGG + chr7.2:6335747-6335766 MS.gene07096:CDS 30.0%
GTTGCTAAACATAATGTCTA+AGG - chr7.2:6335886-6335905 None:intergenic 30.0%
ACCAAGTTGCTACAACAATT+GGG + chr7.2:6335772-6335791 MS.gene07096:CDS 35.0%
CTAACACTCACCATCTTATT+AGG + chr7.2:6335467-6335486 MS.gene07096:intron 35.0%
GAGAGATGAAAAACAAGTTG+AGG + chr7.2:6335827-6335846 MS.gene07096:CDS 35.0%
GATTATGTCACATCCAAACA+TGG + chr7.2:6336104-6336123 MS.gene07096:CDS 35.0%
GCTTTCGCATTGGAAAAATA+TGG + chr7.2:6335858-6335877 MS.gene07096:CDS 35.0%
TACACTGGCAGTACAAATTA+TGG - chr7.2:6336054-6336073 None:intergenic 35.0%
TTTCATCTCTCACATCACAA+TGG - chr7.2:6335818-6335837 None:intergenic 35.0%
! TATTAGTGGACACAATTTGG+TGG + chr7.2:6336358-6336377 MS.gene07096:CDS 35.0%
! TGTGAGGCCAATTTTCAAAA+AGG - chr7.2:6335512-6335531 None:intergenic 35.0%
AACATGGCCATTAATGTTCG+TGG + chr7.2:6335969-6335988 MS.gene07096:CDS 40.0%
AAGTCCTAAGAGACCATGTT+TGG - chr7.2:6336120-6336139 None:intergenic 40.0%
ACATCCAAACATGGTCTCTT+AGG + chr7.2:6336113-6336132 MS.gene07096:CDS 40.0%
ACCCAATTGTTGTAGCAACT+TGG - chr7.2:6335776-6335795 None:intergenic 40.0%
AGTTGCTACAACAATTGGGT+TGG + chr7.2:6335776-6335795 MS.gene07096:CDS 40.0%
CACCAAGTTGCTACAACAAT+TGG + chr7.2:6335771-6335790 MS.gene07096:CDS 40.0%
CAGTACAAATTATGGATCCG+CGG - chr7.2:6336046-6336065 None:intergenic 40.0%
GACATTATGTTTAGCAACGC+TGG + chr7.2:6335888-6335907 MS.gene07096:CDS 40.0%
GACTGATCCACGAACATTAA+TGG - chr7.2:6335979-6335998 None:intergenic 40.0%
GGGTTTCACACTATTATGTG+AGG - chr7.2:6335528-6335547 None:intergenic 40.0%
GTAAGGTTGCTATAGTGACT+GGG + chr7.2:6335658-6335677 MS.gene07096:CDS 40.0%
GTGAAGACATTCGTGGAAAA+TGG + chr7.2:6335708-6335727 MS.gene07096:CDS 40.0%
GTGAGTGAAGTTGAAGCTAT+GGG + chr7.2:6336245-6336264 MS.gene07096:CDS 40.0%
TAAGGTTGCTATAGTGACTG+GGG + chr7.2:6335659-6335678 MS.gene07096:CDS 40.0%
TGAGTGAAGTTGAAGCTATG+GGG + chr7.2:6336246-6336265 MS.gene07096:CDS 40.0%
TTTAGCAACGCTGGAATTGA+AGG + chr7.2:6335897-6335916 MS.gene07096:CDS 40.0%
! TTATCATAGGTTGGAGGGTA+AGG + chr7.2:6335641-6335660 MS.gene07096:intron 40.0%
AAGGTTGCTATAGTGACTGG+GGG + chr7.2:6335660-6335679 MS.gene07096:CDS 45.0%
AGCTGCTCTCTTTCTTGCAT+CGG + chr7.2:6336322-6336341 MS.gene07096:CDS 45.0%
CACGAATGTCTTCACTGTCT+CGG - chr7.2:6335703-6335722 None:intergenic 45.0%
CATCTCTCACATCACAATGG+TGG - chr7.2:6335815-6335834 None:intergenic 45.0%
GGAAACAGTAGCTTTCGCAT+TGG + chr7.2:6335848-6335867 MS.gene07096:CDS 45.0%
GGTAAGGTTGCTATAGTGAC+TGG + chr7.2:6335657-6335676 MS.gene07096:CDS 45.0%
GGTGAGTGAAGTTGAAGCTA+TGG + chr7.2:6336244-6336263 MS.gene07096:CDS 45.0%
TTCAGTGCTCTACATGCAAG+AGG - chr7.2:6336218-6336237 None:intergenic 45.0%
!! ATGTAGAGCACTGAACATGG+AGG + chr7.2:6336223-6336242 MS.gene07096:CDS 45.0%
!! TGCATGTAGAGCACTGAACA+TGG + chr7.2:6336220-6336239 MS.gene07096:CDS 45.0%
AGATGGTGAGTGTTAGACGC+AGG - chr7.2:6335463-6335482 None:intergenic 50.0%
AGCAACAGAAGCAGCTACAC+TGG - chr7.2:6336069-6336088 None:intergenic 50.0%
AGCAACGCTGGAATTGAAGG+TGG + chr7.2:6335900-6335919 MS.gene07096:CDS 50.0%
AGTGTAGCTGCTTCTGTTGC+TGG + chr7.2:6336068-6336087 MS.gene07096:CDS 50.0%
CGAGACAGTGAAGACATTCG+TGG + chr7.2:6335701-6335720 MS.gene07096:CDS 50.0%
GAGTGTTAGACGCAGGAGTA+AGG - chr7.2:6335456-6335475 None:intergenic 50.0%
GGACTTGTACGTTCAACGTG+CGG + chr7.2:6336134-6336153 MS.gene07096:CDS 50.0%
! ATGGTGGGGAGAAAAATCCG+CGG + chr7.2:6336026-6336045 MS.gene07096:CDS 50.0%
! CACAATTTGGTGGTCGATGG+AGG + chr7.2:6336368-6336387 MS.gene07096:CDS 50.0%
! GGACACAATTTGGTGGTCGA+TGG + chr7.2:6336365-6336384 MS.gene07096:CDS 50.0%
ACGCTGCACGTATCATGGTG+GGG + chr7.2:6336012-6336031 MS.gene07096:CDS 55.0%
ATAGTGACTGGGGGAGCAAG+CGG + chr7.2:6335669-6335688 MS.gene07096:CDS 55.0%
CAAGCACGCTGCACGTATCA+TGG + chr7.2:6336007-6336026 MS.gene07096:CDS 55.0%
CACGCTGCACGTATCATGGT+GGG + chr7.2:6336011-6336030 MS.gene07096:CDS 55.0%
GCTGCTTCTGTTGCTGGAAC+TGG + chr7.2:6336074-6336093 MS.gene07096:CDS 55.0%
GCTTCTGTTGCTGGAACTGG+TGG + chr7.2:6336077-6336096 MS.gene07096:CDS 55.0%
TGCGGTGAGCTTGGAGCTTA+CGG + chr7.2:6336152-6336171 MS.gene07096:CDS 55.0%
TGCTCTACATGCAAGAGGCG+TGG - chr7.2:6336213-6336232 None:intergenic 55.0%
! AGAGGCGTGGCAACAGCATA+CGG - chr7.2:6336200-6336219 None:intergenic 55.0%
ACTGGGGGAGCAAGCGGAAT+AGG + chr7.2:6335675-6335694 MS.gene07096:CDS 60.0%
CGTTCAACGTGCGGTGAGCT+TGG + chr7.2:6336143-6336162 MS.gene07096:CDS 60.0%
GCACGCTGCACGTATCATGG+TGG + chr7.2:6336010-6336029 MS.gene07096:CDS 60.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 6335427 6336433 6335427 ID=MS.gene07096
chr7.2 mRNA 6335427 6336433 6335427 ID=MS.gene07096.t1;Parent=MS.gene07096
chr7.2 exon 6335427 6335440 6335427 ID=MS.gene07096.t1.exon1;Parent=MS.gene07096.t1
chr7.2 CDS 6335427 6335440 6335427 ID=cds.MS.gene07096.t1;Parent=MS.gene07096.t1
chr7.2 exon 6335650 6336433 6335650 ID=MS.gene07096.t1.exon2;Parent=MS.gene07096.t1
chr7.2 CDS 6335650 6336433 6335650 ID=cds.MS.gene07096.t1;Parent=MS.gene07096.t1
Gene Sequence

>MS.gene07096

ATGTCGAGAAAAAGGTACTACATATTCCTTACTCCTGCGTCTAACACTCACCATCTTATTAGGTGAAATTTTGTCGATTTAACCTTTTTGAAAATTGGCCTCACATAATAGTGTGAAACCCACATGAATATATCCTAATAAGAACATTACTACATGAATTTATTTTATCCTATTTATGTTGCATGAATACATGATGAATCAATCTTAATTAATTTTATCATAGGTTGGAGGGTAAGGTTGCTATAGTGACTGGGGGAGCAAGCGGAATAGGAGCCGAGACAGTGAAGACATTCGTGGAAAATGGAGCATTTGTAGTCATAGCAGATATCAATGATGAATTGGGTCACCAAGTTGCTACAACAATTGGGTTGGACAAAGTGAGTTACCACCATTGTGATGTGAGAGATGAAAAACAAGTTGAGGAAACAGTAGCTTTCGCATTGGAAAAATATGGAACCTTAGACATTATGTTTAGCAACGCTGGAATTGAAGGTGGTATGTGTAGCAGCATACTAGAATTTGATCTGAATGAATTTGACAACAACATGGCCATTAATGTTCGTGGATCAGTCGCAGCTATCAAGCACGCTGCACGTATCATGGTGGGGAGAAAAATCCGCGGATCCATAATTTGTACTGCCAGTGTAGCTGCTTCTGTTGCTGGAACTGGTGGTCATGATTATGTCACATCCAAACATGGTCTCTTAGGACTTGTACGTTCAACGTGCGGTGAGCTTGGAGCTTACGGAATTAGAGTCAATTCAATCTCACCGTATGCTGTTGCCACGCCTCTTGCATGTAGAGCACTGAACATGGAGGTGAGTGAAGTTGAAGCTATGGGGAATGATTCTGCTAATTTGAAAGGAATTACATTAAAGGCTACTCATATTGCAGAAGCTGCTCTCTTTCTTGCATCGGAAGAATCAGCTTATATTAGTGGACACAATTTGGTGGTCGATGGAGGCTTTTCTGTTATTAATAGTTGTGTTCCTACTACTAAAAAATAA

Protein sequence

>MS.gene07096.t1

MSRKRLEGKVAIVTGGASGIGAETVKTFVENGAFVVIADINDELGHQVATTIGLDKVSYHHCDVRDEKQVEETVAFALEKYGTLDIMFSNAGIEGGMCSSILEFDLNEFDNNMAINVRGSVAAIKHAARIMVGRKIRGSIICTASVAASVAGTGGHDYVTSKHGLLGLVRSTCGELGAYGIRVNSISPYAVATPLACRALNMEVSEVEAMGNDSANLKGITLKATHIAEAALFLASEESAYISGHNLVVDGGFSVINSCVPTTKK