Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07096.t1 | XP_003626026.1 | 94 | 265 | 16 | 0 | 1 | 265 | 1 | 265 | 9.60E-132 | 479.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07096.t1 | Q94K41 | 62.5 | 256 | 95 | 1 | 1 | 256 | 1 | 255 | 3.4e-85 | 316.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07096.t1 | G7KTR4 | 94.0 | 265 | 16 | 0 | 1 | 265 | 1 | 265 | 6.9e-132 | 479.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049346 | MS.gene07096 | 0.810609 | 1.06E-50 | -1.69E-46 |
MS.gene049351 | MS.gene07096 | 0.826621 | 2.45E-54 | -1.69E-46 |
MS.gene049356 | MS.gene07096 | 0.825797 | 3.85E-54 | -1.69E-46 |
MS.gene049427 | MS.gene07096 | 0.863671 | 2.11E-64 | -1.69E-46 |
MS.gene049491 | MS.gene07096 | 0.840955 | 6.37E-58 | -1.69E-46 |
MS.gene049661 | MS.gene07096 | 0.865082 | 7.64E-65 | -1.69E-46 |
MS.gene049662 | MS.gene07096 | 0.858281 | 9.18E-63 | -1.69E-46 |
MS.gene049758 | MS.gene07096 | 0.849953 | 2.32E-60 | -1.69E-46 |
MS.gene049760 | MS.gene07096 | 0.835078 | 2.07E-56 | -1.69E-46 |
MS.gene049805 | MS.gene07096 | 0.803911 | 2.78E-49 | -1.69E-46 |
MS.gene050076 | MS.gene07096 | 0.909108 | 8.20E-82 | -1.69E-46 |
MS.gene050301 | MS.gene07096 | 0.868167 | 7.98E-66 | -1.69E-46 |
MS.gene050397 | MS.gene07096 | 0.831951 | 1.25E-55 | -1.69E-46 |
MS.gene050432 | MS.gene07096 | 0.989328 | 1.19E-177 | -1.69E-46 |
MS.gene050520 | MS.gene07096 | 0.802148 | 6.44E-49 | -1.69E-46 |
MS.gene050529 | MS.gene07096 | 0.815396 | 9.44E-52 | -1.69E-46 |
MS.gene050593 | MS.gene07096 | 0.811298 | 7.51E-51 | -1.69E-46 |
MS.gene050670 | MS.gene07096 | 0.817581 | 3.06E-52 | -1.69E-46 |
MS.gene050767 | MS.gene07096 | 0.863428 | 2.51E-64 | -1.69E-46 |
MS.gene050770 | MS.gene07096 | 0.86502 | 7.99E-65 | -1.69E-46 |
MS.gene050783 | MS.gene07096 | 0.819939 | 8.92E-53 | -1.69E-46 |
MS.gene05101 | MS.gene07096 | 0.875478 | 2.98E-68 | -1.69E-46 |
MS.gene05105 | MS.gene07096 | 0.835899 | 1.28E-56 | -1.69E-46 |
MS.gene051228 | MS.gene07096 | 0.835656 | 1.48E-56 | -1.69E-46 |
MS.gene051255 | MS.gene07096 | 0.805616 | 1.23E-49 | -1.69E-46 |
MS.gene051360 | MS.gene07096 | 0.803013 | 4.27E-49 | -1.69E-46 |
MS.gene051387 | MS.gene07096 | 0.816874 | 4.42E-52 | -1.69E-46 |
MS.gene051471 | MS.gene07096 | 0.843572 | 1.29E-58 | -1.69E-46 |
MS.gene051582 | MS.gene07096 | 0.833592 | 4.88E-56 | -1.69E-46 |
MS.gene051666 | MS.gene07096 | 0.831033 | 2.10E-55 | -1.69E-46 |
MS.gene051692 | MS.gene07096 | 0.836138 | 1.12E-56 | -1.69E-46 |
MS.gene051877 | MS.gene07096 | 0.836076 | 1.16E-56 | -1.69E-46 |
MS.gene052078 | MS.gene07096 | 0.85997 | 2.86E-63 | -1.69E-46 |
MS.gene052188 | MS.gene07096 | 0.838788 | 2.34E-57 | -1.69E-46 |
MS.gene052253 | MS.gene07096 | 0.818798 | 1.62E-52 | -1.69E-46 |
MS.gene052271 | MS.gene07096 | 0.821268 | 4.42E-53 | -1.69E-46 |
MS.gene052287 | MS.gene07096 | 0.827712 | 1.34E-54 | -1.69E-46 |
MS.gene052290 | MS.gene07096 | 0.841886 | 3.62E-58 | -1.69E-46 |
MS.gene052310 | MS.gene07096 | 0.851868 | 6.70E-61 | -1.69E-46 |
MS.gene052322 | MS.gene07096 | 0.807587 | 4.70E-50 | -1.69E-46 |
MS.gene052326 | MS.gene07096 | 0.859029 | 5.49E-63 | -1.69E-46 |
MS.gene052340 | MS.gene07096 | 0.854379 | 1.28E-61 | -1.69E-46 |
MS.gene052379 | MS.gene07096 | 0.830783 | 2.42E-55 | -1.69E-46 |
MS.gene052481 | MS.gene07096 | 0.833806 | 4.32E-56 | -1.69E-46 |
MS.gene052484 | MS.gene07096 | 0.844973 | 5.43E-59 | -1.69E-46 |
MS.gene052485 | MS.gene07096 | 0.843429 | 1.41E-58 | -1.69E-46 |
MS.gene052508 | MS.gene07096 | 0.834983 | 2.19E-56 | -1.69E-46 |
MS.gene052510 | MS.gene07096 | 0.83021 | 3.34E-55 | -1.69E-46 |
MS.gene053009 | MS.gene07096 | 0.81856 | 1.84E-52 | -1.69E-46 |
MS.gene053103 | MS.gene07096 | 0.852976 | 3.24E-61 | -1.69E-46 |
MS.gene053104 | MS.gene07096 | 0.860067 | 2.67E-63 | -1.69E-46 |
MS.gene053107 | MS.gene07096 | 0.825675 | 4.12E-54 | -1.69E-46 |
MS.gene053207 | MS.gene07096 | 0.836619 | 8.42E-57 | -1.69E-46 |
MS.gene053209 | MS.gene07096 | 0.896935 | 2.29E-76 | -1.69E-46 |
MS.gene053322 | MS.gene07096 | 0.857086 | 2.07E-62 | -1.69E-46 |
MS.gene053557 | MS.gene07096 | 0.812125 | 4.96E-51 | -1.69E-46 |
MS.gene053813 | MS.gene07096 | 0.825167 | 5.43E-54 | -1.69E-46 |
MS.gene053836 | MS.gene07096 | 0.845055 | 5.16E-59 | -1.69E-46 |
MS.gene054123 | MS.gene07096 | 0.822072 | 2.88E-53 | -1.69E-46 |
MS.gene054327 | MS.gene07096 | 0.803695 | 3.08E-49 | -1.69E-46 |
MS.gene054376 | MS.gene07096 | 0.870975 | 9.72E-67 | -1.69E-46 |
MS.gene054473 | MS.gene07096 | 0.818044 | 2.41E-52 | -1.69E-46 |
MS.gene05455 | MS.gene07096 | 0.831633 | 1.49E-55 | -1.69E-46 |
MS.gene054802 | MS.gene07096 | 0.848592 | 5.56E-60 | -1.69E-46 |
MS.gene054803 | MS.gene07096 | 0.848556 | 5.68E-60 | -1.69E-46 |
MS.gene054804 | MS.gene07096 | 0.851372 | 9.26E-61 | -1.69E-46 |
MS.gene054955 | MS.gene07096 | 0.806616 | 7.54E-50 | -1.69E-46 |
MS.gene05505 | MS.gene07096 | 0.813283 | 2.77E-51 | -1.69E-46 |
MS.gene055116 | MS.gene07096 | 0.857187 | 1.94E-62 | -1.69E-46 |
MS.gene055206 | MS.gene07096 | 0.809131 | 2.20E-50 | -1.69E-46 |
MS.gene055254 | MS.gene07096 | 0.857176 | 1.95E-62 | -1.69E-46 |
MS.gene055277 | MS.gene07096 | 0.898475 | 5.11E-77 | -1.69E-46 |
MS.gene055289 | MS.gene07096 | 0.808558 | 2.92E-50 | -1.69E-46 |
MS.gene055390 | MS.gene07096 | 0.865113 | 7.47E-65 | -1.69E-46 |
MS.gene055397 | MS.gene07096 | 0.850649 | 1.48E-60 | -1.69E-46 |
MS.gene055412 | MS.gene07096 | 0.827057 | 1.93E-54 | -1.69E-46 |
MS.gene055422 | MS.gene07096 | 0.851895 | 6.59E-61 | -1.69E-46 |
MS.gene055428 | MS.gene07096 | 0.870859 | 1.06E-66 | -1.69E-46 |
MS.gene055499 | MS.gene07096 | 0.829567 | 4.79E-55 | -1.69E-46 |
MS.gene055633 | MS.gene07096 | 0.810573 | 1.08E-50 | -1.69E-46 |
MS.gene055647 | MS.gene07096 | 0.839792 | 1.28E-57 | -1.69E-46 |
MS.gene055712 | MS.gene07096 | 0.800974 | 1.12E-48 | -1.69E-46 |
MS.gene055722 | MS.gene07096 | 0.830127 | 3.50E-55 | -1.69E-46 |
MS.gene055859 | MS.gene07096 | 0.813266 | 2.79E-51 | -1.69E-46 |
MS.gene055896 | MS.gene07096 | 0.832579 | 8.72E-56 | -1.69E-46 |
MS.gene05592 | MS.gene07096 | 0.853878 | 1.79E-61 | -1.69E-46 |
MS.gene056191 | MS.gene07096 | 0.833577 | 4.92E-56 | -1.69E-46 |
MS.gene056374 | MS.gene07096 | 0.817769 | 2.78E-52 | -1.69E-46 |
MS.gene056407 | MS.gene07096 | 0.866069 | 3.73E-65 | -1.69E-46 |
MS.gene056410 | MS.gene07096 | 0.842748 | 2.14E-58 | -1.69E-46 |
MS.gene056511 | MS.gene07096 | 0.827911 | 1.20E-54 | -1.69E-46 |
MS.gene056609 | MS.gene07096 | 0.859698 | 3.45E-63 | -1.69E-46 |
MS.gene056612 | MS.gene07096 | 0.839816 | 1.26E-57 | -1.69E-46 |
MS.gene056897 | MS.gene07096 | 0.819012 | 1.45E-52 | -1.69E-46 |
MS.gene056931 | MS.gene07096 | 0.802983 | 4.33E-49 | -1.69E-46 |
MS.gene056933 | MS.gene07096 | 0.801624 | 8.25E-49 | -1.69E-46 |
MS.gene057011 | MS.gene07096 | 0.865543 | 5.47E-65 | -1.69E-46 |
MS.gene05702 | MS.gene07096 | 0.846444 | 2.16E-59 | -1.69E-46 |
MS.gene057123 | MS.gene07096 | 0.816372 | 5.72E-52 | -1.69E-46 |
MS.gene057124 | MS.gene07096 | 0.824471 | 7.93E-54 | -1.69E-46 |
MS.gene057129 | MS.gene07096 | 0.871206 | 8.15E-67 | -1.69E-46 |
MS.gene057146 | MS.gene07096 | 0.839883 | 1.21E-57 | -1.69E-46 |
MS.gene057295 | MS.gene07096 | 0.82714 | 1.84E-54 | -1.69E-46 |
MS.gene057331 | MS.gene07096 | 0.831075 | 2.05E-55 | -1.69E-46 |
MS.gene05733 | MS.gene07096 | 0.815426 | 9.30E-52 | -1.69E-46 |
MS.gene05735 | MS.gene07096 | 0.848077 | 7.71E-60 | -1.69E-46 |
MS.gene057416 | MS.gene07096 | 0.822761 | 1.99E-53 | -1.69E-46 |
MS.gene057448 | MS.gene07096 | 0.851552 | 8.24E-61 | -1.69E-46 |
MS.gene057449 | MS.gene07096 | 0.846347 | 2.30E-59 | -1.69E-46 |
MS.gene057450 | MS.gene07096 | 0.859439 | 4.13E-63 | -1.69E-46 |
MS.gene057749 | MS.gene07096 | 0.81554 | 8.77E-52 | -1.69E-46 |
MS.gene057823 | MS.gene07096 | 0.811255 | 7.67E-51 | -1.69E-46 |
MS.gene057927 | MS.gene07096 | 0.819376 | 1.20E-52 | -1.69E-46 |
MS.gene058002 | MS.gene07096 | 0.861536 | 9.58E-64 | -1.69E-46 |
MS.gene058006 | MS.gene07096 | 0.812426 | 4.26E-51 | -1.69E-46 |
MS.gene058019 | MS.gene07096 | 0.813894 | 2.03E-51 | -1.69E-46 |
MS.gene058082 | MS.gene07096 | 0.831284 | 1.82E-55 | -1.69E-46 |
MS.gene05811 | MS.gene07096 | 0.841133 | 5.71E-58 | -1.69E-46 |
MS.gene058233 | MS.gene07096 | 0.826851 | 2.16E-54 | -1.69E-46 |
MS.gene058293 | MS.gene07096 | 0.886978 | 2.14E-72 | -1.69E-46 |
MS.gene058323 | MS.gene07096 | 0.818308 | 2.10E-52 | -1.69E-46 |
MS.gene058365 | MS.gene07096 | 0.850025 | 2.22E-60 | -1.69E-46 |
MS.gene05842 | MS.gene07096 | 0.805574 | 1.25E-49 | -1.69E-46 |
MS.gene058660 | MS.gene07096 | 0.874153 | 8.44E-68 | -1.69E-46 |
MS.gene058787 | MS.gene07096 | 0.819712 | 1.01E-52 | -1.69E-46 |
MS.gene058928 | MS.gene07096 | 0.812522 | 4.06E-51 | -1.69E-46 |
MS.gene05907 | MS.gene07096 | 0.8471 | 1.43E-59 | -1.69E-46 |
MS.gene059326 | MS.gene07096 | 0.838454 | 2.85E-57 | -1.69E-46 |
MS.gene059366 | MS.gene07096 | 0.806614 | 7.55E-50 | -1.69E-46 |
MS.gene059518 | MS.gene07096 | 0.813006 | 3.18E-51 | -1.69E-46 |
MS.gene059536 | MS.gene07096 | 0.830609 | 2.67E-55 | -1.69E-46 |
MS.gene059597 | MS.gene07096 | 0.860053 | 2.70E-63 | -1.69E-46 |
MS.gene05959 | MS.gene07096 | 0.805081 | 1.59E-49 | -1.69E-46 |
MS.gene059676 | MS.gene07096 | 0.871736 | 5.45E-67 | -1.69E-46 |
MS.gene059688 | MS.gene07096 | 0.885836 | 5.77E-72 | -1.69E-46 |
MS.gene059692 | MS.gene07096 | 0.894801 | 1.75E-75 | -1.69E-46 |
MS.gene059695 | MS.gene07096 | 0.891336 | 4.36E-74 | -1.69E-46 |
MS.gene059708 | MS.gene07096 | 0.829528 | 4.89E-55 | -1.69E-46 |
MS.gene059711 | MS.gene07096 | 0.843619 | 1.25E-58 | -1.69E-46 |
MS.gene05984 | MS.gene07096 | 0.809773 | 1.60E-50 | -1.69E-46 |
MS.gene05986 | MS.gene07096 | 0.802756 | 4.82E-49 | -1.69E-46 |
MS.gene059894 | MS.gene07096 | 0.861025 | 1.37E-63 | -1.69E-46 |
MS.gene059960 | MS.gene07096 | 0.860735 | 1.68E-63 | -1.69E-46 |
MS.gene059974 | MS.gene07096 | 0.825664 | 4.14E-54 | -1.69E-46 |
MS.gene060005 | MS.gene07096 | 0.825128 | 5.55E-54 | -1.69E-46 |
MS.gene060193 | MS.gene07096 | 0.811534 | 6.67E-51 | -1.69E-46 |
MS.gene06037 | MS.gene07096 | 0.868716 | 5.31E-66 | -1.69E-46 |
MS.gene060403 | MS.gene07096 | 0.828847 | 7.16E-55 | -1.69E-46 |
MS.gene060407 | MS.gene07096 | 0.822535 | 2.25E-53 | -1.69E-46 |
MS.gene060569 | MS.gene07096 | 0.809869 | 1.53E-50 | -1.69E-46 |
MS.gene060804 | MS.gene07096 | 0.880394 | 5.69E-70 | -1.69E-46 |
MS.gene060818 | MS.gene07096 | 0.853062 | 3.06E-61 | -1.69E-46 |
MS.gene060837 | MS.gene07096 | 0.842556 | 2.41E-58 | -1.69E-46 |
MS.gene06092 | MS.gene07096 | 0.800091 | 1.70E-48 | -1.69E-46 |
MS.gene061041 | MS.gene07096 | 0.834792 | 2.44E-56 | -1.69E-46 |
MS.gene061049 | MS.gene07096 | 0.861161 | 1.25E-63 | -1.69E-46 |
MS.gene061051 | MS.gene07096 | -0.892602 | 1.36E-74 | -1.69E-46 |
MS.gene061112 | MS.gene07096 | 0.81521 | 1.04E-51 | -1.69E-46 |
MS.gene061200 | MS.gene07096 | 0.858963 | 5.74E-63 | -1.69E-46 |
MS.gene061265 | MS.gene07096 | 0.809224 | 2.10E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07096.t1 | MTR_7g110130 | 93.962 | 265 | 16 | 0 | 1 | 265 | 1 | 265 | 0.0 | 500 |
MS.gene07096.t1 | MTR_2g090165 | 81.132 | 265 | 49 | 1 | 1 | 265 | 1 | 264 | 7.06e-157 | 437 |
MS.gene07096.t1 | MTR_7g110160 | 79.767 | 257 | 33 | 1 | 1 | 257 | 1 | 238 | 5.21e-143 | 401 |
MS.gene07096.t1 | MTR_7g110140 | 70.155 | 258 | 76 | 1 | 1 | 258 | 1 | 257 | 2.00e-129 | 367 |
MS.gene07096.t1 | MTR_6g035395 | 61.538 | 260 | 86 | 2 | 3 | 262 | 2 | 247 | 1.98e-107 | 311 |
MS.gene07096.t1 | MTR_6g023590 | 49.402 | 251 | 126 | 1 | 5 | 254 | 12 | 262 | 5.71e-83 | 249 |
MS.gene07096.t1 | MTR_6g023950 | 50.598 | 251 | 123 | 1 | 5 | 254 | 12 | 262 | 3.55e-81 | 245 |
MS.gene07096.t1 | MTR_4g052340 | 49.804 | 255 | 124 | 2 | 4 | 258 | 12 | 262 | 4.44e-79 | 240 |
MS.gene07096.t1 | MTR_6g023610 | 49.600 | 250 | 125 | 1 | 5 | 253 | 12 | 261 | 9.03e-79 | 239 |
MS.gene07096.t1 | MTR_7g105460 | 50.593 | 253 | 124 | 1 | 5 | 257 | 12 | 263 | 1.30e-78 | 239 |
MS.gene07096.t1 | MTR_4g052320 | 49.042 | 261 | 128 | 3 | 2 | 260 | 4 | 261 | 7.31e-78 | 236 |
MS.gene07096.t1 | MTR_4g052350 | 49.804 | 255 | 124 | 2 | 4 | 258 | 12 | 262 | 3.97e-77 | 235 |
MS.gene07096.t1 | MTR_6g023910 | 48.617 | 253 | 129 | 1 | 2 | 253 | 9 | 261 | 6.71e-77 | 234 |
MS.gene07096.t1 | MTR_6g023600 | 48.207 | 251 | 129 | 1 | 5 | 254 | 12 | 262 | 7.93e-77 | 234 |
MS.gene07096.t1 | MTR_6g023990 | 47.104 | 259 | 132 | 2 | 1 | 254 | 5 | 263 | 1.38e-76 | 233 |
MS.gene07096.t1 | MTR_7g071680 | 47.842 | 278 | 124 | 4 | 2 | 260 | 25 | 300 | 3.68e-76 | 233 |
MS.gene07096.t1 | MTR_4g052300 | 48.659 | 261 | 128 | 3 | 2 | 260 | 4 | 260 | 4.79e-75 | 229 |
MS.gene07096.t1 | MTR_6g023600 | 47.809 | 251 | 124 | 2 | 5 | 254 | 12 | 256 | 3.08e-73 | 224 |
MS.gene07096.t1 | MTR_7g083870 | 46.840 | 269 | 134 | 6 | 4 | 265 | 33 | 299 | 1.89e-70 | 219 |
MS.gene07096.t1 | MTR_7g107670 | 44.141 | 256 | 136 | 3 | 4 | 254 | 31 | 284 | 3.06e-70 | 218 |
MS.gene07096.t1 | MTR_7g105580 | 45.525 | 257 | 120 | 3 | 4 | 259 | 6 | 243 | 2.65e-67 | 209 |
MS.gene07096.t1 | MTR_4g078630 | 44.403 | 268 | 137 | 4 | 1 | 260 | 14 | 277 | 8.07e-66 | 206 |
MS.gene07096.t1 | MTR_3g020670 | 47.510 | 261 | 129 | 3 | 4 | 257 | 14 | 273 | 1.14e-65 | 206 |
MS.gene07096.t1 | MTR_7g105590 | 50.265 | 189 | 93 | 1 | 4 | 192 | 6 | 193 | 2.87e-57 | 182 |
MS.gene07096.t1 | MTR_7g105570 | 39.464 | 261 | 102 | 4 | 2 | 258 | 13 | 221 | 3.54e-49 | 162 |
MS.gene07096.t1 | MTR_3g113870 | 45.055 | 182 | 98 | 2 | 14 | 195 | 29 | 208 | 5.83e-48 | 159 |
MS.gene07096.t1 | MTR_4g084800 | 50.360 | 139 | 69 | 0 | 4 | 142 | 11 | 149 | 3.06e-41 | 139 |
MS.gene07096.t1 | MTR_4g058840 | 30.855 | 269 | 146 | 8 | 6 | 252 | 11 | 261 | 6.65e-24 | 97.8 |
MS.gene07096.t1 | MTR_4g058820 | 30.855 | 269 | 146 | 8 | 6 | 252 | 11 | 261 | 6.65e-24 | 97.8 |
MS.gene07096.t1 | MTR_4g058810 | 29.740 | 269 | 149 | 8 | 6 | 252 | 11 | 261 | 6.10e-20 | 87.0 |
MS.gene07096.t1 | MTR_7g113650 | 27.925 | 265 | 170 | 8 | 5 | 258 | 39 | 293 | 6.96e-20 | 87.0 |
MS.gene07096.t1 | MTR_1g051165 | 28.253 | 269 | 168 | 7 | 4 | 255 | 12 | 272 | 4.70e-19 | 84.7 |
MS.gene07096.t1 | MTR_3g085740 | 26.616 | 263 | 163 | 10 | 4 | 253 | 73 | 318 | 5.17e-19 | 85.1 |
MS.gene07096.t1 | MTR_4g131740 | 28.185 | 259 | 167 | 8 | 5 | 252 | 39 | 289 | 1.02e-18 | 84.0 |
MS.gene07096.t1 | MTR_1196s0010 | 30.709 | 254 | 160 | 8 | 4 | 253 | 272 | 513 | 4.63e-18 | 83.6 |
MS.gene07096.t1 | MTR_4g132850 | 29.804 | 255 | 165 | 7 | 4 | 254 | 5 | 249 | 4.80e-18 | 81.3 |
MS.gene07096.t1 | MTR_1g082760 | 28.253 | 269 | 162 | 9 | 5 | 257 | 39 | 292 | 5.55e-18 | 82.0 |
MS.gene07096.t1 | MTR_7g105560 | 66.071 | 56 | 19 | 0 | 4 | 59 | 11 | 66 | 1.94e-16 | 74.7 |
MS.gene07096.t1 | MTR_4g064887 | 26.923 | 260 | 175 | 8 | 2 | 255 | 11 | 261 | 9.19e-15 | 72.4 |
MS.gene07096.t1 | MTR_3g068070 | 28.462 | 260 | 171 | 9 | 2 | 255 | 11 | 261 | 9.22e-15 | 72.4 |
MS.gene07096.t1 | MTR_8g442750 | 28.295 | 258 | 169 | 9 | 6 | 253 | 14 | 265 | 1.60e-13 | 69.3 |
MS.gene07096.t1 | MTR_3g068175 | 29.008 | 262 | 169 | 8 | 1 | 255 | 12 | 263 | 1.79e-13 | 68.9 |
MS.gene07096.t1 | MTR_7g094520 | 27.843 | 255 | 171 | 6 | 6 | 253 | 11 | 259 | 2.24e-13 | 68.6 |
MS.gene07096.t1 | MTR_3g068155 | 28.077 | 260 | 172 | 9 | 3 | 256 | 16 | 266 | 2.65e-13 | 68.6 |
MS.gene07096.t1 | MTR_3g068065 | 26.772 | 254 | 173 | 7 | 6 | 254 | 17 | 262 | 6.54e-13 | 67.4 |
MS.gene07096.t1 | MTR_3g068085 | 26.378 | 254 | 176 | 6 | 6 | 255 | 15 | 261 | 1.80e-12 | 66.2 |
MS.gene07096.t1 | MTR_4g064887 | 28.856 | 201 | 131 | 6 | 2 | 196 | 11 | 205 | 3.37e-12 | 64.7 |
MS.gene07096.t1 | MTR_4g086400 | 27.488 | 211 | 124 | 5 | 8 | 198 | 6 | 207 | 3.44e-12 | 66.6 |
MS.gene07096.t1 | MTR_4g097510 | 26.842 | 190 | 134 | 4 | 7 | 195 | 3 | 188 | 5.46e-12 | 64.7 |
MS.gene07096.t1 | MTR_4g086410 | 28.910 | 211 | 121 | 5 | 8 | 198 | 6 | 207 | 6.58e-12 | 65.5 |
MS.gene07096.t1 | MTR_7g076660 | 39.560 | 91 | 51 | 2 | 9 | 95 | 8 | 98 | 4.26e-11 | 62.4 |
MS.gene07096.t1 | MTR_7g076660 | 38.462 | 91 | 52 | 2 | 9 | 95 | 7 | 97 | 8.16e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07096.t1 | AT2G47140 | 62.500 | 256 | 95 | 1 | 1 | 256 | 1 | 255 | 1.43e-112 | 324 |
MS.gene07096.t1 | AT3G29250 | 57.588 | 257 | 108 | 1 | 1 | 257 | 1 | 256 | 1.77e-100 | 294 |
MS.gene07096.t1 | AT3G29250 | 57.588 | 257 | 108 | 1 | 1 | 257 | 37 | 292 | 3.31e-100 | 295 |
MS.gene07096.t1 | AT3G29250 | 57.255 | 255 | 108 | 1 | 3 | 257 | 41 | 294 | 1.74e-99 | 293 |
MS.gene07096.t1 | AT2G47130 | 56.589 | 258 | 110 | 2 | 1 | 258 | 1 | 256 | 5.58e-99 | 290 |
MS.gene07096.t1 | AT3G29260 | 57.364 | 258 | 106 | 3 | 1 | 257 | 1 | 255 | 2.45e-97 | 286 |
MS.gene07096.t1 | AT2G47120 | 55.000 | 260 | 110 | 4 | 1 | 258 | 1 | 255 | 9.80e-96 | 282 |
MS.gene07096.t1 | AT2G47120 | 55.294 | 255 | 107 | 4 | 5 | 257 | 6 | 255 | 4.14e-95 | 280 |
MS.gene07096.t1 | AT3G51680 | 48.897 | 272 | 124 | 3 | 4 | 260 | 30 | 301 | 1.92e-73 | 227 |
MS.gene07096.t1 | AT1G52340 | 45.455 | 264 | 133 | 3 | 4 | 257 | 16 | 278 | 6.14e-67 | 209 |
MS.gene07096.t1 | AT3G26760 | 41.509 | 265 | 145 | 4 | 2 | 258 | 32 | 294 | 9.84e-66 | 207 |
MS.gene07096.t1 | AT4G03140 | 42.692 | 260 | 142 | 3 | 4 | 258 | 76 | 333 | 8.08e-65 | 206 |
MS.gene07096.t1 | AT3G26770 | 43.939 | 264 | 132 | 6 | 4 | 257 | 39 | 296 | 2.68e-62 | 198 |
MS.gene07096.t1 | AT3G42960 | 46.415 | 265 | 123 | 7 | 2 | 254 | 4 | 261 | 3.62e-57 | 184 |
MS.gene07096.t1 | AT2G47150 | 33.456 | 272 | 87 | 6 | 6 | 257 | 1 | 198 | 2.90e-35 | 125 |
MS.gene07096.t1 | AT1G07450 | 30.233 | 258 | 170 | 7 | 1 | 255 | 3 | 253 | 6.30e-20 | 86.7 |
MS.gene07096.t1 | AT3G55290 | 29.231 | 260 | 162 | 8 | 6 | 252 | 18 | 268 | 6.56e-20 | 87.0 |
MS.gene07096.t1 | AT3G55290 | 29.231 | 260 | 162 | 8 | 6 | 252 | 17 | 267 | 6.86e-20 | 87.0 |
MS.gene07096.t1 | AT2G29310 | 28.682 | 258 | 171 | 7 | 3 | 255 | 4 | 253 | 1.45e-19 | 85.9 |
MS.gene07096.t1 | AT1G62610 | 29.231 | 260 | 163 | 6 | 6 | 252 | 15 | 266 | 2.19e-19 | 85.5 |
MS.gene07096.t1 | AT1G62610 | 29.231 | 260 | 163 | 6 | 6 | 252 | 14 | 265 | 2.24e-19 | 85.5 |
MS.gene07096.t1 | AT1G62610 | 29.231 | 260 | 163 | 6 | 6 | 252 | 13 | 264 | 2.74e-19 | 85.1 |
MS.gene07096.t1 | AT1G62610 | 29.231 | 260 | 163 | 6 | 6 | 252 | 19 | 270 | 2.90e-19 | 85.5 |
MS.gene07096.t1 | AT2G29340 | 28.846 | 260 | 168 | 7 | 3 | 255 | 4 | 253 | 8.24e-19 | 83.6 |
MS.gene07096.t1 | AT2G29340 | 28.462 | 260 | 169 | 7 | 3 | 255 | 4 | 253 | 1.15e-18 | 84.0 |
MS.gene07096.t1 | AT1G63380 | 29.434 | 265 | 156 | 9 | 6 | 252 | 15 | 266 | 7.33e-18 | 81.3 |
MS.gene07096.t1 | AT1G63380 | 29.104 | 268 | 159 | 9 | 6 | 255 | 19 | 273 | 7.36e-18 | 81.6 |
MS.gene07096.t1 | AT1G63380 | 29.104 | 268 | 159 | 9 | 6 | 255 | 17 | 271 | 8.33e-18 | 81.3 |
MS.gene07096.t1 | AT2G29150 | 30.534 | 262 | 162 | 9 | 2 | 255 | 12 | 261 | 8.92e-18 | 80.9 |
MS.gene07096.t1 | AT3G55310 | 28.846 | 260 | 163 | 8 | 6 | 252 | 17 | 267 | 9.02e-18 | 81.3 |
MS.gene07096.t1 | AT1G63380 | 29.434 | 265 | 156 | 9 | 6 | 252 | 22 | 273 | 9.62e-18 | 81.3 |
MS.gene07096.t1 | AT2G29360 | 28.839 | 267 | 159 | 9 | 3 | 255 | 13 | 262 | 2.41e-17 | 79.7 |
MS.gene07096.t1 | AT2G29290 | 29.963 | 267 | 156 | 7 | 3 | 255 | 4 | 253 | 3.51e-17 | 79.3 |
MS.gene07096.t1 | AT2G17845 | 27.985 | 268 | 166 | 8 | 6 | 256 | 47 | 304 | 6.34e-17 | 79.3 |
MS.gene07096.t1 | AT3G46170 | 27.907 | 258 | 168 | 7 | 6 | 252 | 26 | 276 | 4.57e-16 | 76.6 |
MS.gene07096.t1 | AT1G24360 | 25.969 | 258 | 175 | 8 | 4 | 255 | 72 | 319 | 5.38e-16 | 76.6 |
MS.gene07096.t1 | AT2G30670 | 27.132 | 258 | 175 | 6 | 3 | 255 | 4 | 253 | 4.86e-15 | 73.2 |
MS.gene07096.t1 | AT2G29350 | 28.358 | 268 | 160 | 10 | 2 | 255 | 11 | 260 | 4.98e-15 | 73.6 |
MS.gene07096.t1 | AT2G29340 | 28.641 | 206 | 133 | 5 | 3 | 201 | 4 | 202 | 6.08e-15 | 72.0 |
MS.gene07096.t1 | AT2G29340 | 28.641 | 206 | 133 | 5 | 3 | 201 | 4 | 202 | 6.08e-15 | 72.0 |
MS.gene07096.t1 | AT1G54870 | 26.415 | 265 | 174 | 8 | 5 | 258 | 83 | 337 | 8.44e-15 | 73.6 |
MS.gene07096.t1 | AT1G54870 | 26.415 | 265 | 174 | 8 | 5 | 258 | 81 | 335 | 9.17e-15 | 73.6 |
MS.gene07096.t1 | AT5G06060 | 30.038 | 263 | 161 | 9 | 3 | 255 | 6 | 255 | 2.78e-14 | 71.2 |
MS.gene07096.t1 | AT1G07440 | 27.715 | 267 | 161 | 9 | 3 | 255 | 9 | 257 | 2.87e-14 | 71.2 |
MS.gene07096.t1 | AT4G05530 | 31.008 | 258 | 158 | 8 | 4 | 254 | 7 | 251 | 4.36e-14 | 70.5 |
MS.gene07096.t1 | AT1G49670 | 29.524 | 210 | 119 | 5 | 7 | 196 | 5 | 205 | 5.02e-14 | 72.0 |
MS.gene07096.t1 | AT2G29300 | 28.352 | 261 | 169 | 10 | 3 | 255 | 4 | 254 | 5.46e-14 | 70.5 |
MS.gene07096.t1 | AT1G49670 | 29.524 | 210 | 119 | 5 | 7 | 196 | 5 | 205 | 5.80e-14 | 72.0 |
MS.gene07096.t1 | AT2G29300 | 27.444 | 266 | 175 | 10 | 3 | 260 | 4 | 259 | 7.23e-14 | 70.5 |
MS.gene07096.t1 | AT3G05260 | 26.336 | 262 | 172 | 8 | 5 | 255 | 36 | 287 | 1.27e-13 | 69.7 |
MS.gene07096.t1 | AT2G29290 | 29.954 | 217 | 132 | 6 | 42 | 255 | 37 | 236 | 1.48e-13 | 68.9 |
MS.gene07096.t1 | AT4G13180 | 28.679 | 265 | 160 | 7 | 6 | 255 | 13 | 263 | 7.75e-13 | 67.0 |
MS.gene07096.t1 | AT5G18210 | 28.839 | 267 | 156 | 8 | 6 | 253 | 8 | 259 | 1.72e-12 | 66.2 |
MS.gene07096.t1 | AT2G29350 | 27.570 | 214 | 134 | 8 | 45 | 255 | 27 | 222 | 4.15e-11 | 61.6 |
Find 57 sgRNAs with CRISPR-Local
Find 76 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTGAAAGGAATTACATTAA+AGG | 0.203968 | 7.2:+6336283 | MS.gene07096:CDS |
GACTGATCCACGAACATTAA+TGG | 0.261085 | 7.2:-6335976 | None:intergenic |
AGCAGATATCAATGATGAAT+TGG | 0.283540 | 7.2:+6335746 | MS.gene07096:CDS |
AATCATCAATGTCGAGAAAA+AGG | 0.290314 | 7.2:+6335419 | None:intergenic |
AGTGTAGCTGCTTCTGTTGC+TGG | 0.306606 | 7.2:+6336068 | MS.gene07096:CDS |
GTGAAGACATTCGTGGAAAA+TGG | 0.309291 | 7.2:+6335708 | MS.gene07096:CDS |
ACATCCAAACATGGTCTCTT+AGG | 0.311178 | 7.2:+6336113 | MS.gene07096:CDS |
TTATATTAGTGGACACAATT+TGG | 0.312298 | 7.2:+6336355 | MS.gene07096:CDS |
CACCAAGTTGCTACAACAAT+TGG | 0.313612 | 7.2:+6335771 | MS.gene07096:CDS |
TACACTGGCAGTACAAATTA+TGG | 0.348031 | 7.2:-6336051 | None:intergenic |
GTTGCTAAACATAATGTCTA+AGG | 0.368211 | 7.2:-6335883 | None:intergenic |
GCTGCTTCTGTTGCTGGAAC+TGG | 0.384524 | 7.2:+6336074 | MS.gene07096:CDS |
TTATCATAGGTTGGAGGGTA+AGG | 0.422520 | 7.2:+6335641 | MS.gene07096:intron |
GAAGAATCAGCTTATATTAG+TGG | 0.431042 | 7.2:+6336344 | MS.gene07096:CDS |
TGCGGTGAGCTTGGAGCTTA+CGG | 0.431271 | 7.2:+6336152 | MS.gene07096:CDS |
CGTTCAACGTGCGGTGAGCT+TGG | 0.449623 | 7.2:+6336143 | MS.gene07096:CDS |
GCAGATATCAATGATGAATT+GGG | 0.463215 | 7.2:+6335747 | MS.gene07096:CDS |
AAGTCCTAAGAGACCATGTT+TGG | 0.467093 | 7.2:-6336117 | None:intergenic |
ACCCAATTGTTGTAGCAACT+TGG | 0.467514 | 7.2:-6335773 | None:intergenic |
TTTAGCAACGCTGGAATTGA+AGG | 0.468853 | 7.2:+6335897 | MS.gene07096:CDS |
AATGATTCTGCTAATTTGAA+AGG | 0.470724 | 7.2:+6336269 | MS.gene07096:CDS |
CACGAATGTCTTCACTGTCT+CGG | 0.471132 | 7.2:-6335700 | None:intergenic |
AGCTGCTCTCTTTCTTGCAT+CGG | 0.473087 | 7.2:+6336322 | MS.gene07096:CDS |
ACCAAGTTGCTACAACAATT+GGG | 0.482213 | 7.2:+6335772 | MS.gene07096:CDS |
CAAGCACGCTGCACGTATCA+TGG | 0.486933 | 7.2:+6336007 | MS.gene07096:CDS |
GACATTATGTTTAGCAACGC+TGG | 0.491704 | 7.2:+6335888 | MS.gene07096:CDS |
GGTAAGGTTGCTATAGTGAC+TGG | 0.496701 | 7.2:+6335657 | MS.gene07096:CDS |
AACATGGCCATTAATGTTCG+TGG | 0.507255 | 7.2:+6335969 | MS.gene07096:CDS |
CACAATTTGGTGGTCGATGG+AGG | 0.510608 | 7.2:+6336368 | MS.gene07096:CDS |
GTGAGTGAAGTTGAAGCTAT+GGG | 0.510902 | 7.2:+6336245 | MS.gene07096:CDS |
CACGCTGCACGTATCATGGT+GGG | 0.533620 | 7.2:+6336011 | MS.gene07096:CDS |
AGAGGCGTGGCAACAGCATA+CGG | 0.535077 | 7.2:-6336197 | None:intergenic |
AGCAACAGAAGCAGCTACAC+TGG | 0.548413 | 7.2:-6336066 | None:intergenic |
GCTTCTGTTGCTGGAACTGG+TGG | 0.550638 | 7.2:+6336077 | MS.gene07096:CDS |
AGTTGCTACAACAATTGGGT+TGG | 0.551015 | 7.2:+6335776 | MS.gene07096:CDS |
GGTGAGTGAAGTTGAAGCTA+TGG | 0.560707 | 7.2:+6336244 | MS.gene07096:CDS |
TATTAGTGGACACAATTTGG+TGG | 0.561555 | 7.2:+6336358 | MS.gene07096:CDS |
GGACACAATTTGGTGGTCGA+TGG | 0.563116 | 7.2:+6336365 | MS.gene07096:CDS |
CGAGACAGTGAAGACATTCG+TGG | 0.564162 | 7.2:+6335701 | MS.gene07096:CDS |
GGAAACAGTAGCTTTCGCAT+TGG | 0.572052 | 7.2:+6335848 | MS.gene07096:CDS |
TGCATGTAGAGCACTGAACA+TGG | 0.590712 | 7.2:+6336220 | MS.gene07096:CDS |
GTAAGGTTGCTATAGTGACT+GGG | 0.597391 | 7.2:+6335658 | MS.gene07096:CDS |
TTCAGTGCTCTACATGCAAG+AGG | 0.603585 | 7.2:-6336215 | None:intergenic |
GATTATGTCACATCCAAACA+TGG | 0.609752 | 7.2:+6336104 | MS.gene07096:CDS |
TGCTCTACATGCAAGAGGCG+TGG | 0.617171 | 7.2:-6336210 | None:intergenic |
CATCTCTCACATCACAATGG+TGG | 0.624448 | 7.2:-6335812 | None:intergenic |
GCACGCTGCACGTATCATGG+TGG | 0.626246 | 7.2:+6336010 | MS.gene07096:CDS |
TTTCATCTCTCACATCACAA+TGG | 0.636508 | 7.2:-6335815 | None:intergenic |
AGCAACGCTGGAATTGAAGG+TGG | 0.637971 | 7.2:+6335900 | MS.gene07096:CDS |
GGACTTGTACGTTCAACGTG+CGG | 0.641327 | 7.2:+6336134 | MS.gene07096:CDS |
CAGTACAAATTATGGATCCG+CGG | 0.653793 | 7.2:-6336043 | None:intergenic |
TGAGTGAAGTTGAAGCTATG+GGG | 0.654036 | 7.2:+6336246 | MS.gene07096:CDS |
GAATGAATTTGACAACAACA+TGG | 0.663292 | 7.2:+6335953 | MS.gene07096:CDS |
TAAGGTTGCTATAGTGACTG+GGG | 0.680742 | 7.2:+6335659 | MS.gene07096:CDS |
ACGCTGCACGTATCATGGTG+GGG | 0.693738 | 7.2:+6336012 | MS.gene07096:CDS |
AAGGTTGCTATAGTGACTGG+GGG | 0.716926 | 7.2:+6335660 | MS.gene07096:CDS |
ATGTAGAGCACTGAACATGG+AGG | 0.811309 | 7.2:+6336223 | MS.gene07096:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATCTTAATTAATTTTATCAT+AGG | + | chr7.2:6335628-6335647 | MS.gene07096:intron | 10.0% |
!!! | TAATTAATTTTATCATAGGT+TGG | + | chr7.2:6335632-6335651 | MS.gene07096:intron | 15.0% |
!! | TTATTAGGATATATTCATGT+GGG | - | chr7.2:6335548-6335567 | None:intergenic | 20.0% |
!! | TTTGAAAGGAATTACATTAA+AGG | + | chr7.2:6336283-6336302 | MS.gene07096:CDS | 20.0% |
!!! | GATTTAACCTTTTTGAAAAT+TGG | + | chr7.2:6335502-6335521 | MS.gene07096:intron | 20.0% |
! | AATGATTCTGCTAATTTGAA+AGG | + | chr7.2:6336269-6336288 | MS.gene07096:CDS | 25.0% |
! | CAAAATTTCACCTAATAAGA+TGG | - | chr7.2:6335480-6335499 | None:intergenic | 25.0% |
! | CATGTAGTAATGTTCTTATT+AGG | - | chr7.2:6335563-6335582 | None:intergenic | 25.0% |
! | CTTATTAGGATATATTCATG+TGG | - | chr7.2:6335549-6335568 | None:intergenic | 25.0% |
! | TGTATTCATGCAACATAAAT+AGG | - | chr7.2:6335598-6335617 | None:intergenic | 25.0% |
!! | TTATATTAGTGGACACAATT+TGG | + | chr7.2:6336355-6336374 | MS.gene07096:CDS | 25.0% |
!!! | TAATTTTATCATAGGTTGGA+GGG | + | chr7.2:6335636-6335655 | MS.gene07096:intron | 25.0% |
!!! | TTAATTTTATCATAGGTTGG+AGG | + | chr7.2:6335635-6335654 | MS.gene07096:intron | 25.0% |
AGCAGATATCAATGATGAAT+TGG | + | chr7.2:6335746-6335765 | MS.gene07096:CDS | 30.0% | |
GAAGAATCAGCTTATATTAG+TGG | + | chr7.2:6336344-6336363 | MS.gene07096:CDS | 30.0% | |
GAATGAATTTGACAACAACA+TGG | + | chr7.2:6335953-6335972 | MS.gene07096:CDS | 30.0% | |
GCAGATATCAATGATGAATT+GGG | + | chr7.2:6335747-6335766 | MS.gene07096:CDS | 30.0% | |
GTTGCTAAACATAATGTCTA+AGG | - | chr7.2:6335886-6335905 | None:intergenic | 30.0% | |
ACCAAGTTGCTACAACAATT+GGG | + | chr7.2:6335772-6335791 | MS.gene07096:CDS | 35.0% | |
CTAACACTCACCATCTTATT+AGG | + | chr7.2:6335467-6335486 | MS.gene07096:intron | 35.0% | |
GAGAGATGAAAAACAAGTTG+AGG | + | chr7.2:6335827-6335846 | MS.gene07096:CDS | 35.0% | |
GATTATGTCACATCCAAACA+TGG | + | chr7.2:6336104-6336123 | MS.gene07096:CDS | 35.0% | |
GCTTTCGCATTGGAAAAATA+TGG | + | chr7.2:6335858-6335877 | MS.gene07096:CDS | 35.0% | |
TACACTGGCAGTACAAATTA+TGG | - | chr7.2:6336054-6336073 | None:intergenic | 35.0% | |
TTTCATCTCTCACATCACAA+TGG | - | chr7.2:6335818-6335837 | None:intergenic | 35.0% | |
! | TATTAGTGGACACAATTTGG+TGG | + | chr7.2:6336358-6336377 | MS.gene07096:CDS | 35.0% |
! | TGTGAGGCCAATTTTCAAAA+AGG | - | chr7.2:6335512-6335531 | None:intergenic | 35.0% |
AACATGGCCATTAATGTTCG+TGG | + | chr7.2:6335969-6335988 | MS.gene07096:CDS | 40.0% | |
AAGTCCTAAGAGACCATGTT+TGG | - | chr7.2:6336120-6336139 | None:intergenic | 40.0% | |
ACATCCAAACATGGTCTCTT+AGG | + | chr7.2:6336113-6336132 | MS.gene07096:CDS | 40.0% | |
ACCCAATTGTTGTAGCAACT+TGG | - | chr7.2:6335776-6335795 | None:intergenic | 40.0% | |
AGTTGCTACAACAATTGGGT+TGG | + | chr7.2:6335776-6335795 | MS.gene07096:CDS | 40.0% | |
CACCAAGTTGCTACAACAAT+TGG | + | chr7.2:6335771-6335790 | MS.gene07096:CDS | 40.0% | |
CAGTACAAATTATGGATCCG+CGG | - | chr7.2:6336046-6336065 | None:intergenic | 40.0% | |
GACATTATGTTTAGCAACGC+TGG | + | chr7.2:6335888-6335907 | MS.gene07096:CDS | 40.0% | |
GACTGATCCACGAACATTAA+TGG | - | chr7.2:6335979-6335998 | None:intergenic | 40.0% | |
GGGTTTCACACTATTATGTG+AGG | - | chr7.2:6335528-6335547 | None:intergenic | 40.0% | |
GTAAGGTTGCTATAGTGACT+GGG | + | chr7.2:6335658-6335677 | MS.gene07096:CDS | 40.0% | |
GTGAAGACATTCGTGGAAAA+TGG | + | chr7.2:6335708-6335727 | MS.gene07096:CDS | 40.0% | |
GTGAGTGAAGTTGAAGCTAT+GGG | + | chr7.2:6336245-6336264 | MS.gene07096:CDS | 40.0% | |
TAAGGTTGCTATAGTGACTG+GGG | + | chr7.2:6335659-6335678 | MS.gene07096:CDS | 40.0% | |
TGAGTGAAGTTGAAGCTATG+GGG | + | chr7.2:6336246-6336265 | MS.gene07096:CDS | 40.0% | |
TTTAGCAACGCTGGAATTGA+AGG | + | chr7.2:6335897-6335916 | MS.gene07096:CDS | 40.0% | |
! | TTATCATAGGTTGGAGGGTA+AGG | + | chr7.2:6335641-6335660 | MS.gene07096:intron | 40.0% |
AAGGTTGCTATAGTGACTGG+GGG | + | chr7.2:6335660-6335679 | MS.gene07096:CDS | 45.0% | |
AGCTGCTCTCTTTCTTGCAT+CGG | + | chr7.2:6336322-6336341 | MS.gene07096:CDS | 45.0% | |
CACGAATGTCTTCACTGTCT+CGG | - | chr7.2:6335703-6335722 | None:intergenic | 45.0% | |
CATCTCTCACATCACAATGG+TGG | - | chr7.2:6335815-6335834 | None:intergenic | 45.0% | |
GGAAACAGTAGCTTTCGCAT+TGG | + | chr7.2:6335848-6335867 | MS.gene07096:CDS | 45.0% | |
GGTAAGGTTGCTATAGTGAC+TGG | + | chr7.2:6335657-6335676 | MS.gene07096:CDS | 45.0% | |
GGTGAGTGAAGTTGAAGCTA+TGG | + | chr7.2:6336244-6336263 | MS.gene07096:CDS | 45.0% | |
TTCAGTGCTCTACATGCAAG+AGG | - | chr7.2:6336218-6336237 | None:intergenic | 45.0% | |
!! | ATGTAGAGCACTGAACATGG+AGG | + | chr7.2:6336223-6336242 | MS.gene07096:CDS | 45.0% |
!! | TGCATGTAGAGCACTGAACA+TGG | + | chr7.2:6336220-6336239 | MS.gene07096:CDS | 45.0% |
AGATGGTGAGTGTTAGACGC+AGG | - | chr7.2:6335463-6335482 | None:intergenic | 50.0% | |
AGCAACAGAAGCAGCTACAC+TGG | - | chr7.2:6336069-6336088 | None:intergenic | 50.0% | |
AGCAACGCTGGAATTGAAGG+TGG | + | chr7.2:6335900-6335919 | MS.gene07096:CDS | 50.0% | |
AGTGTAGCTGCTTCTGTTGC+TGG | + | chr7.2:6336068-6336087 | MS.gene07096:CDS | 50.0% | |
CGAGACAGTGAAGACATTCG+TGG | + | chr7.2:6335701-6335720 | MS.gene07096:CDS | 50.0% | |
GAGTGTTAGACGCAGGAGTA+AGG | - | chr7.2:6335456-6335475 | None:intergenic | 50.0% | |
GGACTTGTACGTTCAACGTG+CGG | + | chr7.2:6336134-6336153 | MS.gene07096:CDS | 50.0% | |
! | ATGGTGGGGAGAAAAATCCG+CGG | + | chr7.2:6336026-6336045 | MS.gene07096:CDS | 50.0% |
! | CACAATTTGGTGGTCGATGG+AGG | + | chr7.2:6336368-6336387 | MS.gene07096:CDS | 50.0% |
! | GGACACAATTTGGTGGTCGA+TGG | + | chr7.2:6336365-6336384 | MS.gene07096:CDS | 50.0% |
ACGCTGCACGTATCATGGTG+GGG | + | chr7.2:6336012-6336031 | MS.gene07096:CDS | 55.0% | |
ATAGTGACTGGGGGAGCAAG+CGG | + | chr7.2:6335669-6335688 | MS.gene07096:CDS | 55.0% | |
CAAGCACGCTGCACGTATCA+TGG | + | chr7.2:6336007-6336026 | MS.gene07096:CDS | 55.0% | |
CACGCTGCACGTATCATGGT+GGG | + | chr7.2:6336011-6336030 | MS.gene07096:CDS | 55.0% | |
GCTGCTTCTGTTGCTGGAAC+TGG | + | chr7.2:6336074-6336093 | MS.gene07096:CDS | 55.0% | |
GCTTCTGTTGCTGGAACTGG+TGG | + | chr7.2:6336077-6336096 | MS.gene07096:CDS | 55.0% | |
TGCGGTGAGCTTGGAGCTTA+CGG | + | chr7.2:6336152-6336171 | MS.gene07096:CDS | 55.0% | |
TGCTCTACATGCAAGAGGCG+TGG | - | chr7.2:6336213-6336232 | None:intergenic | 55.0% | |
! | AGAGGCGTGGCAACAGCATA+CGG | - | chr7.2:6336200-6336219 | None:intergenic | 55.0% |
ACTGGGGGAGCAAGCGGAAT+AGG | + | chr7.2:6335675-6335694 | MS.gene07096:CDS | 60.0% | |
CGTTCAACGTGCGGTGAGCT+TGG | + | chr7.2:6336143-6336162 | MS.gene07096:CDS | 60.0% | |
GCACGCTGCACGTATCATGG+TGG | + | chr7.2:6336010-6336029 | MS.gene07096:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 6335427 | 6336433 | 6335427 | ID=MS.gene07096 |
chr7.2 | mRNA | 6335427 | 6336433 | 6335427 | ID=MS.gene07096.t1;Parent=MS.gene07096 |
chr7.2 | exon | 6335427 | 6335440 | 6335427 | ID=MS.gene07096.t1.exon1;Parent=MS.gene07096.t1 |
chr7.2 | CDS | 6335427 | 6335440 | 6335427 | ID=cds.MS.gene07096.t1;Parent=MS.gene07096.t1 |
chr7.2 | exon | 6335650 | 6336433 | 6335650 | ID=MS.gene07096.t1.exon2;Parent=MS.gene07096.t1 |
chr7.2 | CDS | 6335650 | 6336433 | 6335650 | ID=cds.MS.gene07096.t1;Parent=MS.gene07096.t1 |
Gene Sequence |
Protein sequence |