Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76214.t1 | KEH44330.1 | 95.1 | 588 | 27 | 2 | 1 | 587 | 51 | 637 | 0.00E+00 | 1093.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76214.t1 | Q6F6B5 | 42.4 | 578 | 303 | 10 | 20 | 587 | 69 | 626 | 6.6e-112 | 406.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76214.t1 | A0A072W244 | 95.1 | 588 | 27 | 2 | 1 | 587 | 51 | 637 | 0.0e+00 | 1093.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049351 | MS.gene76214 | 0.855694 | 5.31E-62 | -1.69E-46 |
MS.gene049389 | MS.gene76214 | 0.807119 | 5.91E-50 | -1.69E-46 |
MS.gene049427 | MS.gene76214 | 0.803227 | 3.85E-49 | -1.69E-46 |
MS.gene049491 | MS.gene76214 | 0.828339 | 9.50E-55 | -1.69E-46 |
MS.gene049758 | MS.gene76214 | 0.832999 | 6.86E-56 | -1.69E-46 |
MS.gene050076 | MS.gene76214 | 0.806763 | 7.02E-50 | -1.69E-46 |
MS.gene050099 | MS.gene76214 | 0.864756 | 9.67E-65 | -1.69E-46 |
MS.gene050231 | MS.gene76214 | 0.812113 | 4.99E-51 | -1.69E-46 |
MS.gene050301 | MS.gene76214 | 0.889456 | 2.38E-73 | -1.69E-46 |
MS.gene050397 | MS.gene76214 | 0.84947 | 3.17E-60 | -1.69E-46 |
MS.gene050464 | MS.gene76214 | 0.843264 | 1.56E-58 | -1.69E-46 |
MS.gene050529 | MS.gene76214 | 0.818321 | 2.08E-52 | -1.69E-46 |
MS.gene050558 | MS.gene76214 | 0.807301 | 5.41E-50 | -1.69E-46 |
MS.gene05101 | MS.gene76214 | 0.878783 | 2.12E-69 | -1.69E-46 |
MS.gene051471 | MS.gene76214 | 0.834337 | 3.18E-56 | -1.69E-46 |
MS.gene051662 | MS.gene76214 | 0.804409 | 2.19E-49 | -1.69E-46 |
MS.gene051663 | MS.gene76214 | 0.833847 | 4.21E-56 | -1.69E-46 |
MS.gene051860 | MS.gene76214 | 0.831823 | 1.34E-55 | -1.69E-46 |
MS.gene052078 | MS.gene76214 | 0.864105 | 1.54E-64 | -1.69E-46 |
MS.gene052178 | MS.gene76214 | 0.825508 | 4.51E-54 | -1.69E-46 |
MS.gene052188 | MS.gene76214 | 0.82109 | 4.86E-53 | -1.69E-46 |
MS.gene052207 | MS.gene76214 | 0.804391 | 2.21E-49 | -1.69E-46 |
MS.gene052253 | MS.gene76214 | 0.818223 | 2.19E-52 | -1.69E-46 |
MS.gene052310 | MS.gene76214 | 0.838405 | 2.93E-57 | -1.69E-46 |
MS.gene052326 | MS.gene76214 | 0.845125 | 4.94E-59 | -1.69E-46 |
MS.gene052340 | MS.gene76214 | 0.812386 | 4.35E-51 | -1.69E-46 |
MS.gene052485 | MS.gene76214 | 0.808642 | 2.80E-50 | -1.69E-46 |
MS.gene053557 | MS.gene76214 | 0.807975 | 3.89E-50 | -1.69E-46 |
MS.gene053836 | MS.gene76214 | 0.866115 | 3.61E-65 | -1.69E-46 |
MS.gene054010 | MS.gene76214 | 0.805951 | 1.04E-49 | -1.69E-46 |
MS.gene054011 | MS.gene76214 | 0.820321 | 7.30E-53 | -1.69E-46 |
MS.gene054012 | MS.gene76214 | 0.814727 | 1.33E-51 | -1.69E-46 |
MS.gene054013 | MS.gene76214 | 0.814746 | 1.32E-51 | -1.69E-46 |
MS.gene054123 | MS.gene76214 | 0.83647 | 9.19E-57 | -1.69E-46 |
MS.gene054376 | MS.gene76214 | 0.805113 | 1.56E-49 | -1.69E-46 |
MS.gene054473 | MS.gene76214 | 0.803158 | 3.98E-49 | -1.69E-46 |
MS.gene05455 | MS.gene76214 | 0.877723 | 5.00E-69 | -1.69E-46 |
MS.gene054802 | MS.gene76214 | 0.832918 | 7.19E-56 | -1.69E-46 |
MS.gene054803 | MS.gene76214 | 0.831767 | 1.39E-55 | -1.69E-46 |
MS.gene054804 | MS.gene76214 | 0.833075 | 6.57E-56 | -1.69E-46 |
MS.gene055277 | MS.gene76214 | 0.862945 | 3.54E-64 | -1.69E-46 |
MS.gene055390 | MS.gene76214 | 0.866608 | 2.52E-65 | -1.69E-46 |
MS.gene055422 | MS.gene76214 | 0.883496 | 4.27E-71 | -1.69E-46 |
MS.gene055428 | MS.gene76214 | 0.848773 | 4.95E-60 | -1.69E-46 |
MS.gene055604 | MS.gene76214 | 0.816911 | 4.33E-52 | -1.69E-46 |
MS.gene055712 | MS.gene76214 | 0.830381 | 3.03E-55 | -1.69E-46 |
MS.gene055930 | MS.gene76214 | 0.802469 | 5.53E-49 | -1.69E-46 |
MS.gene056191 | MS.gene76214 | 0.813294 | 2.75E-51 | -1.69E-46 |
MS.gene056407 | MS.gene76214 | 0.822651 | 2.11E-53 | -1.69E-46 |
MS.gene056410 | MS.gene76214 | 0.825095 | 5.65E-54 | -1.69E-46 |
MS.gene056452 | MS.gene76214 | 0.819578 | 1.08E-52 | -1.69E-46 |
MS.gene056612 | MS.gene76214 | 0.84721 | 1.34E-59 | -1.69E-46 |
MS.gene056796 | MS.gene76214 | 0.814791 | 1.29E-51 | -1.69E-46 |
MS.gene05702 | MS.gene76214 | 0.839939 | 1.17E-57 | -1.69E-46 |
MS.gene057121 | MS.gene76214 | 0.842636 | 2.29E-58 | -1.69E-46 |
MS.gene057123 | MS.gene76214 | 0.800694 | 1.28E-48 | -1.69E-46 |
MS.gene057245 | MS.gene76214 | 0.826595 | 2.49E-54 | -1.69E-46 |
MS.gene057295 | MS.gene76214 | 0.805869 | 1.08E-49 | -1.69E-46 |
MS.gene05733 | MS.gene76214 | 0.80711 | 5.93E-50 | -1.69E-46 |
MS.gene057439 | MS.gene76214 | 0.842028 | 3.32E-58 | -1.69E-46 |
MS.gene057450 | MS.gene76214 | 0.801913 | 7.19E-49 | -1.69E-46 |
MS.gene058002 | MS.gene76214 | 0.85853 | 7.73E-63 | -1.69E-46 |
MS.gene05811 | MS.gene76214 | 0.881326 | 2.63E-70 | -1.69E-46 |
MS.gene058142 | MS.gene76214 | 0.815439 | 9.24E-52 | -1.69E-46 |
MS.gene058233 | MS.gene76214 | 0.805656 | 1.20E-49 | -1.69E-46 |
MS.gene058276 | MS.gene76214 | 0.811124 | 8.19E-51 | -1.69E-46 |
MS.gene058293 | MS.gene76214 | 0.808615 | 2.84E-50 | -1.69E-46 |
MS.gene05842 | MS.gene76214 | 0.84447 | 7.41E-59 | -1.69E-46 |
MS.gene058660 | MS.gene76214 | 0.881922 | 1.60E-70 | -1.69E-46 |
MS.gene058845 | MS.gene76214 | 0.80316 | 3.98E-49 | -1.69E-46 |
MS.gene05886 | MS.gene76214 | 0.821384 | 4.16E-53 | -1.69E-46 |
MS.gene05907 | MS.gene76214 | 0.890157 | 1.27E-73 | -1.69E-46 |
MS.gene059141 | MS.gene76214 | 0.803075 | 4.14E-49 | -1.69E-46 |
MS.gene059294 | MS.gene76214 | 0.807753 | 4.33E-50 | -1.69E-46 |
MS.gene059326 | MS.gene76214 | 0.836958 | 6.90E-57 | -1.69E-46 |
MS.gene059518 | MS.gene76214 | 0.852622 | 4.09E-61 | -1.69E-46 |
MS.gene059597 | MS.gene76214 | 0.847057 | 1.47E-59 | -1.69E-46 |
MS.gene05959 | MS.gene76214 | 0.804944 | 1.69E-49 | -1.69E-46 |
MS.gene059676 | MS.gene76214 | 0.843502 | 1.35E-58 | -1.69E-46 |
MS.gene059688 | MS.gene76214 | 0.807863 | 4.11E-50 | -1.69E-46 |
MS.gene059692 | MS.gene76214 | 0.817741 | 2.82E-52 | -1.69E-46 |
MS.gene059695 | MS.gene76214 | 0.815737 | 7.93E-52 | -1.69E-46 |
MS.gene05984 | MS.gene76214 | 0.84133 | 5.07E-58 | -1.69E-46 |
MS.gene059894 | MS.gene76214 | 0.836904 | 7.12E-57 | -1.69E-46 |
MS.gene06037 | MS.gene76214 | 0.840902 | 6.57E-58 | -1.69E-46 |
MS.gene060407 | MS.gene76214 | 0.800616 | 1.33E-48 | -1.69E-46 |
MS.gene06090 | MS.gene76214 | 0.807969 | 3.90E-50 | -1.69E-46 |
MS.gene061049 | MS.gene76214 | 0.845639 | 3.58E-59 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76214.t1 | MTR_1g112280 | 95.839 | 697 | 27 | 2 | 1 | 696 | 51 | 746 | 0.0 | 1356 |
MS.gene76214.t1 | MTR_1g112280 | 95.375 | 627 | 27 | 2 | 1 | 626 | 51 | 676 | 0.0 | 1202 |
MS.gene76214.t1 | MTR_8g080340 | 32.090 | 134 | 91 | 0 | 560 | 693 | 16 | 149 | 5.76e-19 | 85.1 |
MS.gene76214.t1 | MTR_5g459450 | 34.375 | 128 | 82 | 2 | 565 | 691 | 94 | 220 | 9.00e-14 | 75.5 |
MS.gene76214.t1 | MTR_1g050740 | 27.907 | 215 | 111 | 5 | 502 | 691 | 17 | 212 | 1.01e-13 | 75.1 |
MS.gene76214.t1 | MTR_8g080310 | 30.894 | 123 | 85 | 0 | 568 | 690 | 15 | 137 | 1.24e-13 | 69.7 |
MS.gene76214.t1 | MTR_3g073100 | 35.200 | 125 | 79 | 2 | 568 | 691 | 86 | 209 | 1.29e-13 | 74.7 |
MS.gene76214.t1 | MTR_8g095170 | 31.429 | 140 | 71 | 3 | 577 | 692 | 45 | 183 | 2.48e-12 | 70.5 |
MS.gene76214.t1 | MTR_1g062740 | 26.490 | 151 | 88 | 1 | 565 | 692 | 53 | 203 | 3.69e-12 | 70.1 |
MS.gene76214.t1 | MTR_8g095170 | 31.429 | 140 | 71 | 3 | 577 | 692 | 45 | 183 | 4.42e-12 | 69.7 |
MS.gene76214.t1 | MTR_7g451440 | 30.597 | 134 | 93 | 0 | 559 | 692 | 234 | 367 | 5.09e-12 | 68.9 |
MS.gene76214.t1 | MTR_8g007500 | 32.836 | 134 | 90 | 0 | 559 | 692 | 239 | 372 | 6.92e-12 | 68.6 |
MS.gene76214.t1 | MTR_8g007500 | 28.022 | 182 | 104 | 1 | 536 | 690 | 166 | 347 | 4.40e-11 | 66.2 |
MS.gene76214.t1 | MTR_8g088930 | 29.134 | 127 | 90 | 0 | 565 | 691 | 61 | 187 | 9.89e-12 | 68.9 |
MS.gene76214.t1 | MTR_8g088930 | 30.822 | 146 | 91 | 3 | 508 | 653 | 60 | 195 | 4.98e-11 | 66.6 |
MS.gene76214.t1 | MTR_8g088930 | 29.134 | 127 | 90 | 0 | 565 | 691 | 61 | 187 | 9.97e-12 | 68.9 |
MS.gene76214.t1 | MTR_8g088930 | 30.822 | 146 | 91 | 3 | 508 | 653 | 60 | 195 | 4.97e-11 | 66.6 |
MS.gene76214.t1 | MTR_4g107460 | 31.646 | 158 | 107 | 1 | 531 | 687 | 23 | 180 | 1.94e-11 | 66.6 |
MS.gene76214.t1 | MTR_8g039100 | 33.333 | 126 | 84 | 0 | 565 | 690 | 78 | 203 | 2.12e-11 | 67.8 |
MS.gene76214.t1 | MTR_7g089950 | 32.308 | 130 | 82 | 4 | 565 | 691 | 96 | 222 | 2.32e-11 | 67.8 |
MS.gene76214.t1 | MTR_8g088930 | 29.134 | 127 | 90 | 0 | 565 | 691 | 61 | 187 | 2.95e-11 | 67.4 |
MS.gene76214.t1 | MTR_8g088930 | 30.822 | 146 | 91 | 3 | 508 | 653 | 60 | 195 | 7.48e-11 | 65.9 |
MS.gene76214.t1 | MTR_8g088930 | 29.134 | 127 | 90 | 0 | 565 | 691 | 61 | 187 | 3.13e-11 | 67.0 |
MS.gene76214.t1 | MTR_8g088930 | 30.822 | 146 | 91 | 3 | 508 | 653 | 60 | 195 | 7.54e-11 | 65.9 |
MS.gene76214.t1 | MTR_3g097260 | 30.625 | 160 | 86 | 4 | 556 | 691 | 48 | 206 | 3.45e-11 | 67.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene76214.t1 | AT1G75010 | 47.612 | 691 | 332 | 10 | 20 | 700 | 69 | 739 | 0.0 | 629 |
MS.gene76214.t1 | AT1G60890 | 35.433 | 127 | 82 | 0 | 565 | 691 | 71 | 197 | 3.17e-16 | 83.6 |
MS.gene76214.t1 | AT1G60890 | 35.433 | 127 | 82 | 0 | 565 | 691 | 59 | 185 | 3.56e-16 | 83.2 |
MS.gene76214.t1 | AT2G26420 | 30.994 | 171 | 113 | 2 | 527 | 692 | 12 | 182 | 1.03e-14 | 78.6 |
MS.gene76214.t1 | AT2G26420 | 30.994 | 171 | 113 | 2 | 527 | 692 | 12 | 182 | 1.03e-14 | 78.6 |
MS.gene76214.t1 | AT2G26420 | 30.994 | 171 | 113 | 2 | 527 | 692 | 12 | 182 | 1.44e-14 | 77.8 |
MS.gene76214.t1 | AT1G21980 | 27.027 | 185 | 106 | 3 | 536 | 691 | 43 | 227 | 3.25e-14 | 77.0 |
MS.gene76214.t1 | AT3G07960 | 30.667 | 150 | 81 | 2 | 565 | 691 | 29 | 178 | 2.88e-13 | 73.9 |
MS.gene76214.t1 | AT1G77740 | 30.061 | 163 | 109 | 2 | 539 | 698 | 52 | 212 | 4.36e-13 | 73.2 |
MS.gene76214.t1 | AT1G77740 | 30.061 | 163 | 109 | 2 | 539 | 698 | 52 | 212 | 4.36e-13 | 73.2 |
MS.gene76214.t1 | AT4G17080 | 29.851 | 134 | 94 | 0 | 559 | 692 | 299 | 432 | 4.80e-13 | 72.8 |
MS.gene76214.t1 | AT4G17080 | 30.400 | 125 | 87 | 0 | 566 | 690 | 283 | 407 | 6.33e-11 | 65.9 |
MS.gene76214.t1 | AT3G07960 | 30.667 | 150 | 81 | 2 | 565 | 691 | 29 | 178 | 5.84e-13 | 72.8 |
MS.gene76214.t1 | AT3G07960 | 30.667 | 150 | 81 | 2 | 565 | 691 | 29 | 178 | 6.92e-13 | 72.4 |
MS.gene76214.t1 | AT3G07960 | 30.667 | 150 | 81 | 2 | 565 | 691 | 29 | 178 | 6.92e-13 | 72.4 |
MS.gene76214.t1 | AT1G10900 | 30.709 | 127 | 88 | 0 | 565 | 691 | 59 | 185 | 7.06e-13 | 72.4 |
MS.gene76214.t1 | AT1G10900 | 30.709 | 127 | 88 | 0 | 565 | 691 | 59 | 185 | 7.06e-13 | 72.4 |
MS.gene76214.t1 | AT1G10900 | 30.709 | 127 | 88 | 0 | 565 | 691 | 59 | 185 | 7.06e-13 | 72.4 |
MS.gene76214.t1 | AT2G35170 | 29.851 | 134 | 94 | 0 | 559 | 692 | 268 | 401 | 4.09e-12 | 69.7 |
Find 166 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATCATCAGCTTCCCTTTCT+TGG | 0.160785 | 1.1:-79367605 | None:intergenic |
TGAATAGGTACACTGAAATT+TGG | 0.182648 | 1.1:+79370350 | MS.gene76214:intron |
TATATTTGATTGTCCTTTCC+TGG | 0.194395 | 1.1:+79365523 | MS.gene76214:CDS |
GAGAATACTAATTTACTTAT+TGG | 0.199862 | 1.1:+79363834 | MS.gene76214:CDS |
GAAATATCTATGATGGTTTA+TGG | 0.235774 | 1.1:+79368456 | MS.gene76214:CDS |
ATGCATATGACTGCACTATT+TGG | 0.239687 | 1.1:-79365808 | None:intergenic |
AGGAAAATGCAGGGCAAGTT+TGG | 0.247568 | 1.1:-79367015 | None:intergenic |
TTTAATAATTTCTGAATTGC+AGG | 0.270512 | 1.1:-79365300 | None:intergenic |
GACAGAACACCGTGCTTCTT+TGG | 0.282395 | 1.1:-79367810 | None:intergenic |
CTTAACCCTTCAAAGCTAAA+AGG | 0.285883 | 1.1:-79363475 | None:intergenic |
AAATCTGTCATCTATAATAC+TGG | 0.287616 | 1.1:-79367162 | None:intergenic |
ATCGGTGGTTTGCAAACTTC+TGG | 0.294923 | 1.1:+79368855 | MS.gene76214:CDS |
AGCTGTCTTCTCTGCGCTTT+TGG | 0.295123 | 1.1:+79362551 | MS.gene76214:CDS |
AAAATTACCTTCTTCATTAA+CGG | 0.298913 | 1.1:-79367405 | None:intergenic |
AAGAAGCCAGAATTGGATTT+GGG | 0.299412 | 1.1:+79365465 | MS.gene76214:CDS |
AACCAGGGGCGTCTTGTTCT+TGG | 0.303924 | 1.1:+79368428 | MS.gene76214:intron |
AAGTCTGGTGATGCCTTCTT+TGG | 0.305312 | 1.1:+79368914 | MS.gene76214:CDS |
AAAGAAGCCAGAATTGGATT+TGG | 0.312541 | 1.1:+79365464 | MS.gene76214:CDS |
AGTGGGGCTTTGACAATTCC+TGG | 0.315719 | 1.1:-79362963 | None:intergenic |
TTTCCTGGGTGTTTCTTTGA+AGG | 0.320867 | 1.1:+79365538 | MS.gene76214:CDS |
CGCAGAGAAGACAGCTGAAA+TGG | 0.336689 | 1.1:-79362544 | None:intergenic |
ATCATCAGCTTCCCTTTCTT+GGG | 0.346872 | 1.1:-79367604 | None:intergenic |
TTCTTGAAATAGAATGTTCC+TGG | 0.349806 | 1.1:-79368500 | None:intergenic |
GCAGCTTGGAAACTGGAATC+TGG | 0.352297 | 1.1:+79367551 | MS.gene76214:CDS |
TGTTGTGGAAATACAATATA+GGG | 0.352525 | 1.1:+79368239 | MS.gene76214:CDS |
CTAGGGAGCAGCTTGGAAAC+TGG | 0.352578 | 1.1:+79367544 | MS.gene76214:CDS |
AGCAGCCCCAAATCCAATTC+TGG | 0.372964 | 1.1:-79365471 | None:intergenic |
CTGTTGTGGAAATACAATAT+AGG | 0.375868 | 1.1:+79368238 | MS.gene76214:CDS |
TTCTCAGGTAAAAGCTTTGA+TGG | 0.377982 | 1.1:+79363800 | MS.gene76214:intron |
TCTTCATTAACGGATTCATA+AGG | 0.378330 | 1.1:-79367395 | None:intergenic |
GCTCAAAGTTGTCTGCTTCA+AGG | 0.379579 | 1.1:+79367228 | MS.gene76214:CDS |
GCTAAAAGGCTTCAAAACTA+TGG | 0.380131 | 1.1:-79363461 | None:intergenic |
AGTCAGCAACAAACTGTCTC+TGG | 0.381755 | 1.1:+79367065 | MS.gene76214:CDS |
TGTTATAAAGAAGCCAGAAT+TGG | 0.388043 | 1.1:+79365458 | MS.gene76214:CDS |
TAAGAATTTACCTTCCCTTC+AGG | 0.388358 | 1.1:-79368297 | None:intergenic |
TGCTATATCACTATCATTGA+TGG | 0.389779 | 1.1:-79365848 | None:intergenic |
GAATAGGTACACTGAAATTT+GGG | 0.392508 | 1.1:+79370351 | MS.gene76214:intron |
TGCAATGACTTCAACCAAAT+CGG | 0.396115 | 1.1:-79362476 | None:intergenic |
TCGTGTATTCTGTTGTTTGA+CGG | 0.402618 | 1.1:-79365888 | None:intergenic |
AGCTTTGATGGGGAAACTTA+AGG | 0.404513 | 1.1:+79363812 | MS.gene76214:CDS |
AGAAGAAGCGAAATCCGATT+TGG | 0.405146 | 1.1:+79362462 | MS.gene76214:CDS |
ATATTTGATTGTCCTTTCCT+GGG | 0.406458 | 1.1:+79365524 | MS.gene76214:CDS |
CTTCCTTAGGTGGCTAGTGC+AGG | 0.407971 | 1.1:+79363367 | MS.gene76214:intron |
TTGGTTGAAGTCATTGCAAT+TGG | 0.411903 | 1.1:+79362481 | MS.gene76214:CDS |
CTTCATTAACGGATTCATAA+GGG | 0.412878 | 1.1:-79367394 | None:intergenic |
GAGCTGTTATTGCTCGTGTT+TGG | 0.413127 | 1.1:-79367209 | None:intergenic |
GAGATCTTATAACGTTGATA+AGG | 0.414385 | 1.1:+79367121 | MS.gene76214:CDS |
GGAACATTCTATTTCAAGAA+TGG | 0.415848 | 1.1:+79368503 | MS.gene76214:CDS |
AGTAGGTTGGGCTCGACATC+AGG | 0.417739 | 1.1:-79365940 | None:intergenic |
AGATCTTATAACGTTGATAA+GGG | 0.421092 | 1.1:+79367122 | MS.gene76214:CDS |
CTATATTGTATTTCCACAAC+AGG | 0.424847 | 1.1:-79368237 | None:intergenic |
TCGGAAGGCCTCACACCAAC+AGG | 0.431900 | 1.1:-79367663 | None:intergenic |
AAGAATGGAGATATGTTTCA+AGG | 0.440013 | 1.1:+79368518 | MS.gene76214:CDS |
TAGGTGGCTAGTGCAGGATA+TGG | 0.445358 | 1.1:+79363373 | MS.gene76214:intron |
GTCTTTGAAATTGCCAAAGA+AGG | 0.449174 | 1.1:-79368927 | None:intergenic |
CAAAAGAGTGGGCCCAAGAA+AGG | 0.452782 | 1.1:+79367592 | MS.gene76214:CDS |
TTCTGGAAGGGAAAGGCAAA+TGG | 0.454145 | 1.1:+79368872 | MS.gene76214:CDS |
TAAACAGTCTTTCGACTCTT+CGG | 0.455530 | 1.1:-79367682 | None:intergenic |
TGGCACAGCGGCAAGAGATC+AGG | 0.458775 | 1.1:+79368476 | MS.gene76214:CDS |
CAGTTTCCAAGCTGCTCCCT+AGG | 0.460619 | 1.1:-79367543 | None:intergenic |
ATAAGGGATAGGACAATTAG+AGG | 0.460878 | 1.1:-79367378 | None:intergenic |
GGCAATTGTGAGTCCGTTTG+TGG | 0.465780 | 1.1:-79363440 | None:intergenic |
AAGATACTTACCTAAGTGTA+AGG | 0.466797 | 1.1:-79365975 | None:intergenic |
GAGCACGACTTCATAAATAG+TGG | 0.468451 | 1.1:-79362981 | None:intergenic |
GGGCGTCTTGTTCTTGGAGA+TGG | 0.473196 | 1.1:+79368434 | MS.gene76214:CDS |
AGCATATTCCACCTTCCTGT+TGG | 0.473885 | 1.1:+79367648 | MS.gene76214:CDS |
GGAGATGGAAATATCTATGA+TGG | 0.474755 | 1.1:+79368449 | MS.gene76214:CDS |
TACAGCGGCGGAATTGATAT+CGG | 0.484499 | 1.1:+79362439 | MS.gene76214:CDS |
CAGGAAGGTGGAATATGCTT+AGG | 0.487208 | 1.1:-79367644 | None:intergenic |
TATGAATCCGTTAATGAAGA+AGG | 0.494377 | 1.1:+79367398 | MS.gene76214:CDS |
GACAGTCGTGATCAGTAGGT+TGG | 0.494454 | 1.1:-79365953 | None:intergenic |
CATTGCAATTGGCGGTAGAA+AGG | 0.494720 | 1.1:+79362492 | MS.gene76214:CDS |
GCTTTGACAATTCCTGGGCA+AGG | 0.495426 | 1.1:-79362957 | None:intergenic |
TCTCAGGTAAAAGCTTTGAT+GGG | 0.495980 | 1.1:+79363801 | MS.gene76214:intron |
TTCTTTGGCAATTTCAAAGA+CGG | 0.496112 | 1.1:+79368929 | MS.gene76214:CDS |
CAGCTTGGAAACTGGAATCT+GGG | 0.497400 | 1.1:+79367552 | MS.gene76214:CDS |
ACAAACTGTCTCTGGGAAAG+AGG | 0.503277 | 1.1:+79367073 | MS.gene76214:CDS |
GGAAACTGGAATCTGGGCCC+TGG | 0.507776 | 1.1:+79367558 | MS.gene76214:CDS |
TGACAAACACTGCGCAGAGT+TGG | 0.508108 | 1.1:+79367184 | MS.gene76214:CDS |
GCCAAGGTGGTCTGCCTGAA+GGG | 0.513027 | 1.1:+79368283 | MS.gene76214:CDS |
GGCAGGTGTGGAAGCAGTGA+TGG | 0.515489 | 1.1:+79367740 | MS.gene76214:CDS |
ATGCTTAGGTTATCCACCAT+TGG | 0.516196 | 1.1:-79367630 | None:intergenic |
AGCACGACTTCATAAATAGT+GGG | 0.518051 | 1.1:-79362980 | None:intergenic |
ACAGTCGTGATCAGTAGGTT+GGG | 0.522663 | 1.1:-79365952 | None:intergenic |
GTTGAAGTCATTGCAATTGG+CGG | 0.525641 | 1.1:+79362484 | MS.gene76214:CDS |
GCATGAGCCGGAGGCAGGTG+TGG | 0.529807 | 1.1:+79367728 | MS.gene76214:CDS |
AAGGGAAAGGCAAATGGAGA+GGG | 0.532264 | 1.1:+79368878 | MS.gene76214:CDS |
ACTGCTTCCACACCTGCCTC+CGG | 0.534605 | 1.1:-79367735 | None:intergenic |
AAAAGAGTGGGCCCAAGAAA+GGG | 0.535989 | 1.1:+79367593 | MS.gene76214:CDS |
AGGGAAAGGCAAATGGAGAG+GGG | 0.536953 | 1.1:+79368879 | MS.gene76214:CDS |
TGGATAGTATACCACCACTC+TGG | 0.537473 | 1.1:-79366995 | None:intergenic |
TGTTCGTGCAGCATCTATGC+TGG | 0.537748 | 1.1:+79367833 | MS.gene76214:CDS |
AATTCCGCCGCTGTAACCGT+TGG | 0.540596 | 1.1:-79362431 | None:intergenic |
TTAACGGATTCATAAGGGAT+AGG | 0.544925 | 1.1:-79367389 | None:intergenic |
TCCACCTTCCTGTTGGTGTG+AGG | 0.546047 | 1.1:+79367655 | MS.gene76214:CDS |
GTCAGCAACAAACTGTCTCT+GGG | 0.548258 | 1.1:+79367066 | MS.gene76214:CDS |
TGCCAAGGTGGTCTGCCTGA+AGG | 0.548874 | 1.1:+79368282 | MS.gene76214:CDS |
GAAACTGTAAGGTCCACAAA+CGG | 0.552096 | 1.1:+79363427 | MS.gene76214:CDS |
TCTGCTGCAGAACCTTGCCC+AGG | 0.554275 | 1.1:+79362945 | MS.gene76214:intron |
CAACAAAGGTCTACTAAGCA+AGG | 0.556946 | 1.1:+79362694 | MS.gene76214:CDS |
GGATAGTATACCACCACTCT+GGG | 0.558036 | 1.1:-79366994 | None:intergenic |
AGGTGGTCTGCCTGAAGGGA+AGG | 0.558342 | 1.1:+79368287 | MS.gene76214:CDS |
TTCAAAGACGGATGGCGGCA+TGG | 0.564291 | 1.1:+79368941 | MS.gene76214:CDS |
GCTATATCACTATCATTGAT+GGG | 0.564613 | 1.1:-79365847 | None:intergenic |
CCGCTGTAACCGTTGGACAA+TGG | 0.565682 | 1.1:-79362424 | None:intergenic |
GTGGGGCTTTGACAATTCCT+GGG | 0.566289 | 1.1:-79362962 | None:intergenic |
TGGTTTGCAAACTTCTGGAA+GGG | 0.569915 | 1.1:+79368860 | MS.gene76214:CDS |
TTGGCAATTTCAAAGACGGA+TGG | 0.570378 | 1.1:+79368933 | MS.gene76214:CDS |
TACACTGAAATTTGGGATCA+CGG | 0.572724 | 1.1:+79370358 | MS.gene76214:CDS |
GCAATTTCAAAGACGGATGG+CGG | 0.577985 | 1.1:+79368936 | MS.gene76214:CDS |
ACTCTGGGAAGGTTGTTGTA+CGG | 0.578741 | 1.1:-79366979 | None:intergenic |
TGCAAACTTCTGGAAGGGAA+AGG | 0.579004 | 1.1:+79368865 | MS.gene76214:CDS |
CAGTCTTTCGACTCTTCGGA+AGG | 0.581994 | 1.1:-79367678 | None:intergenic |
TAAGGACAGTCGTGATCAGT+AGG | 0.582500 | 1.1:-79365957 | None:intergenic |
GTGGTTTGCAAACTTCTGGA+AGG | 0.583196 | 1.1:+79368859 | MS.gene76214:CDS |
AGCTGATGATACACCAATGG+TGG | 0.587823 | 1.1:+79367617 | MS.gene76214:CDS |
CTCAGGTAAAAGCTTTGATG+GGG | 0.588289 | 1.1:+79363802 | MS.gene76214:intron |
TCACGACTGTCCTTACACTT+AGG | 0.588645 | 1.1:+79365965 | MS.gene76214:CDS |
AACAAAGTGGAGTCCTGTTG+TGG | 0.594201 | 1.1:+79368224 | MS.gene76214:CDS |
TCCCTTCAGGCAGACCACCT+TGG | 0.595487 | 1.1:-79368284 | None:intergenic |
ATCTTATAACGTTGATAAGG+GGG | 0.598467 | 1.1:+79367124 | MS.gene76214:CDS |
AGATACAAGGGACGATGCCA+AGG | 0.599966 | 1.1:+79368267 | MS.gene76214:CDS |
GAGATATGTTTCAAGGATCG+TGG | 0.601230 | 1.1:+79368525 | MS.gene76214:CDS |
GATCTTATAACGTTGATAAG+GGG | 0.602409 | 1.1:+79367123 | MS.gene76214:CDS |
AGCGGCAAGAGATCAGGTCC+AGG | 0.603757 | 1.1:+79368482 | MS.gene76214:CDS |
GATTTGAAGTGGCAAAAGAG+TGG | 0.603772 | 1.1:+79367580 | MS.gene76214:CDS |
TTCAAAGAAACACCCAGGAA+AGG | 0.604072 | 1.1:-79365536 | None:intergenic |
GAAGGGAAAGGCAAATGGAG+AGG | 0.613049 | 1.1:+79368877 | MS.gene76214:CDS |
ATTTGAAGTGGCAAAAGAGT+GGG | 0.615548 | 1.1:+79367581 | MS.gene76214:CDS |
ATATAGGGGAGGAAGATACA+AGG | 0.618509 | 1.1:+79368254 | MS.gene76214:CDS |
TCTGGGCCCTGGATTTGAAG+TGG | 0.618907 | 1.1:+79367569 | MS.gene76214:CDS |
GGATGATGTCATGCACGGCA+AGG | 0.621090 | 1.1:+79368550 | MS.gene76214:CDS |
AAGAAGCACAATTACAACAA+AGG | 0.624935 | 1.1:+79362680 | MS.gene76214:CDS |
AACGTGATTTGTCAACAAAG+TGG | 0.625546 | 1.1:+79368211 | MS.gene76214:CDS |
GTGTGAATGCAAATGGAGAG+AGG | 0.626401 | 1.1:+79368975 | MS.gene76214:CDS |
GCCTCACACCAACAGGAAGG+TGG | 0.629056 | 1.1:-79367656 | None:intergenic |
AATCTGTCATCTATAATACT+GGG | 0.629535 | 1.1:-79367161 | None:intergenic |
AGAAGCCAGAATTGGATTTG+GGG | 0.631126 | 1.1:+79365466 | MS.gene76214:CDS |
TGGAGGGATGATGTCATGCA+CGG | 0.631513 | 1.1:+79368545 | MS.gene76214:CDS |
GACAAACTTCCATTGTCCAA+CGG | 0.632152 | 1.1:+79362415 | MS.gene76214:CDS |
TTGTCCAACGGTTACAGCGG+CGG | 0.635320 | 1.1:+79362427 | MS.gene76214:CDS |
GTTGTGGAAATACAATATAG+GGG | 0.640990 | 1.1:+79368240 | MS.gene76214:CDS |
AGTATACCACCACTCTGGGA+AGG | 0.644388 | 1.1:-79366990 | None:intergenic |
AGACTTGTTGACTCTAGATG+AGG | 0.648376 | 1.1:+79365078 | MS.gene76214:CDS |
TATGTTTCAAGGATCGTGGA+GGG | 0.652467 | 1.1:+79368529 | MS.gene76214:CDS |
CCATTGTCCAACGGTTACAG+CGG | 0.654863 | 1.1:+79362424 | MS.gene76214:CDS |
GGAAGCTGATGATACACCAA+TGG | 0.657220 | 1.1:+79367614 | MS.gene76214:CDS |
AGTAACAAACCAAAGAAGCA+CGG | 0.658630 | 1.1:+79367801 | MS.gene76214:CDS |
TCTACACATCACAATGTGCA+CGG | 0.659684 | 1.1:+79362390 | None:intergenic |
AGGGTTAAGACGAAAAGATG+AGG | 0.662671 | 1.1:+79363489 | MS.gene76214:CDS |
GAATGTACAAACAAGGACAA+TGG | 0.663850 | 1.1:-79363009 | None:intergenic |
AAGGCCTCACACCAACAGGA+AGG | 0.668342 | 1.1:-79367659 | None:intergenic |
GTGGAAATACAATATAGGGG+AGG | 0.668898 | 1.1:+79368243 | MS.gene76214:CDS |
AAATATCAAAAGCGACAGTG+TGG | 0.674008 | 1.1:-79363402 | None:intergenic |
GTCAAACAACAGAATACACG+AGG | 0.682365 | 1.1:+79365890 | MS.gene76214:CDS |
GCACGACTTCATAAATAGTG+GGG | 0.684283 | 1.1:-79362979 | None:intergenic |
CAACAACCTTCCCAGAGTGG+TGG | 0.686943 | 1.1:+79366984 | MS.gene76214:CDS |
ATATGTTTCAAGGATCGTGG+AGG | 0.691184 | 1.1:+79368528 | MS.gene76214:CDS |
TACAAGGGACGATGCCAAGG+TGG | 0.695745 | 1.1:+79368270 | MS.gene76214:CDS |
GAAAGGCAAATGGAGAGGGG+CGG | 0.715092 | 1.1:+79368882 | MS.gene76214:CDS |
TATAGGGGAGGAAGATACAA+GGG | 0.718321 | 1.1:+79368255 | MS.gene76214:CDS |
GTACAACAACCTTCCCAGAG+TGG | 0.725672 | 1.1:+79366981 | MS.gene76214:CDS |
ATACCTTCAAAGAAACACCC+AGG | 0.745843 | 1.1:-79365541 | None:intergenic |
TATGATGGTTTATGGCACAG+CGG | 0.781523 | 1.1:+79368464 | MS.gene76214:CDS |
ACACATCACAATGTGCACGG+AGG | 0.784389 | 1.1:+79362393 | None:intergenic |
TCAAACAACAGAATACACGA+GGG | 0.791232 | 1.1:+79365891 | MS.gene76214:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 79362403 | 79370414 | 79362403 | ID=MS.gene76214 |
chr1.1 | mRNA | 79362403 | 79370414 | 79362403 | ID=MS.gene76214.t1;Parent=MS.gene76214 |
chr1.1 | exon | 79362403 | 79362572 | 79362403 | ID=MS.gene76214.t1.exon1;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79362403 | 79362572 | 79362403 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79362657 | 79362715 | 79362657 | ID=MS.gene76214.t1.exon2;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79362657 | 79362715 | 79362657 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79362955 | 79363019 | 79362955 | ID=MS.gene76214.t1.exon3;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79362955 | 79363019 | 79362955 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79363376 | 79363510 | 79363376 | ID=MS.gene76214.t1.exon4;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79363376 | 79363510 | 79363376 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79363807 | 79363855 | 79363807 | ID=MS.gene76214.t1.exon5;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79363807 | 79363855 | 79363807 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79365050 | 79365162 | 79365050 | ID=MS.gene76214.t1.exon6;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79365050 | 79365162 | 79365050 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79365251 | 79365322 | 79365251 | ID=MS.gene76214.t1.exon7;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79365251 | 79365322 | 79365251 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79365449 | 79365559 | 79365449 | ID=MS.gene76214.t1.exon8;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79365449 | 79365559 | 79365449 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79365805 | 79365986 | 79365805 | ID=MS.gene76214.t1.exon9;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79365805 | 79365986 | 79365805 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79366971 | 79367249 | 79366971 | ID=MS.gene76214.t1.exon10;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79366971 | 79367249 | 79366971 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79367346 | 79367419 | 79367346 | ID=MS.gene76214.t1.exon11;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79367346 | 79367419 | 79367346 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79367529 | 79367854 | 79367529 | ID=MS.gene76214.t1.exon12;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79367529 | 79367854 | 79367529 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79368204 | 79368308 | 79368204 | ID=MS.gene76214.t1.exon13;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79368204 | 79368308 | 79368204 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79368434 | 79368571 | 79368434 | ID=MS.gene76214.t1.exon14;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79368434 | 79368571 | 79368434 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79368830 | 79368996 | 79368830 | ID=MS.gene76214.t1.exon15;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79368830 | 79368996 | 79368830 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
chr1.1 | exon | 79370357 | 79370414 | 79370357 | ID=MS.gene76214.t1.exon16;Parent=MS.gene76214.t1 |
chr1.1 | CDS | 79370357 | 79370414 | 79370357 | ID=cds.MS.gene76214.t1;Parent=MS.gene76214.t1 |
Gene Sequence |
Protein sequence |