Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78462.t1 | XP_003623222.2 | 86.7 | 498 | 11 | 1 | 1 | 443 | 1 | 498 | 6.80E-239 | 836.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78462.t1 | O80437 | 68.7 | 492 | 95 | 3 | 9 | 442 | 10 | 500 | 1.5e-189 | 663.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78462.t1 | G7L6J6 | 86.7 | 498 | 11 | 1 | 1 | 443 | 1 | 498 | 4.9e-239 | 836.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene78462 | 0.800319 | 1.52E-48 | -1.69E-46 |
| MS.gene049346 | MS.gene78462 | 0.802284 | 6.04E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene78462 | 0.832409 | 9.61E-56 | -1.69E-46 |
| MS.gene049491 | MS.gene78462 | 0.816806 | 4.57E-52 | -1.69E-46 |
| MS.gene049681 | MS.gene78462 | 0.851352 | 9.39E-61 | -1.69E-46 |
| MS.gene049758 | MS.gene78462 | 0.835053 | 2.10E-56 | -1.69E-46 |
| MS.gene050301 | MS.gene78462 | 0.838945 | 2.13E-57 | -1.69E-46 |
| MS.gene050397 | MS.gene78462 | 0.852674 | 3.95E-61 | -1.69E-46 |
| MS.gene050971 | MS.gene78462 | 0.826543 | 2.56E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene78462 | 0.822896 | 1.85E-53 | -1.69E-46 |
| MS.gene051255 | MS.gene78462 | 0.806219 | 9.15E-50 | -1.69E-46 |
| MS.gene051360 | MS.gene78462 | 0.8014 | 9.17E-49 | -1.69E-46 |
| MS.gene051663 | MS.gene78462 | 0.804287 | 2.32E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene78462 | 0.839755 | 1.31E-57 | -1.69E-46 |
| MS.gene052011 | MS.gene78462 | -0.824457 | 7.99E-54 | -1.69E-46 |
| MS.gene052178 | MS.gene78462 | 0.801919 | 7.17E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene78462 | 0.816753 | 4.70E-52 | -1.69E-46 |
| MS.gene052253 | MS.gene78462 | 0.835027 | 2.13E-56 | -1.69E-46 |
| MS.gene052310 | MS.gene78462 | 0.808345 | 3.24E-50 | -1.69E-46 |
| MS.gene052326 | MS.gene78462 | 0.80485 | 1.77E-49 | -1.69E-46 |
| MS.gene052340 | MS.gene78462 | 0.83407 | 3.71E-56 | -1.69E-46 |
| MS.gene052485 | MS.gene78462 | 0.832665 | 8.31E-56 | -1.69E-46 |
| MS.gene053758 | MS.gene78462 | 0.826173 | 3.14E-54 | -1.69E-46 |
| MS.gene053813 | MS.gene78462 | 0.832545 | 8.89E-56 | -1.69E-46 |
| MS.gene053836 | MS.gene78462 | 0.869961 | 2.09E-66 | -1.69E-46 |
| MS.gene054010 | MS.gene78462 | 0.84956 | 2.99E-60 | -1.69E-46 |
| MS.gene054011 | MS.gene78462 | 0.84079 | 7.03E-58 | -1.69E-46 |
| MS.gene054012 | MS.gene78462 | 0.849557 | 3.00E-60 | -1.69E-46 |
| MS.gene054013 | MS.gene78462 | 0.84946 | 3.19E-60 | -1.69E-46 |
| MS.gene054183 | MS.gene78462 | 0.809381 | 1.95E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene78462 | 0.828046 | 1.12E-54 | -1.69E-46 |
| MS.gene055116 | MS.gene78462 | 0.814281 | 1.67E-51 | -1.69E-46 |
| MS.gene055277 | MS.gene78462 | 0.874082 | 8.92E-68 | -1.69E-46 |
| MS.gene055390 | MS.gene78462 | 0.844509 | 7.23E-59 | -1.69E-46 |
| MS.gene055422 | MS.gene78462 | 0.844193 | 8.80E-59 | -1.69E-46 |
| MS.gene055428 | MS.gene78462 | 0.826473 | 2.66E-54 | -1.69E-46 |
| MS.gene055604 | MS.gene78462 | 0.850243 | 1.93E-60 | -1.69E-46 |
| MS.gene055666 | MS.gene78462 | 0.810526 | 1.10E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene78462 | 0.887748 | 1.09E-72 | -1.69E-46 |
| MS.gene056407 | MS.gene78462 | 0.814343 | 1.62E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene78462 | 0.819466 | 1.14E-52 | -1.69E-46 |
| MS.gene056612 | MS.gene78462 | 0.812944 | 3.28E-51 | -1.69E-46 |
| MS.gene056659 | MS.gene78462 | 0.817315 | 3.51E-52 | -1.69E-46 |
| MS.gene056723 | MS.gene78462 | 0.81024 | 1.27E-50 | -1.69E-46 |
| MS.gene056902 | MS.gene78462 | 0.807086 | 6.00E-50 | -1.69E-46 |
| MS.gene056931 | MS.gene78462 | 0.849525 | 3.06E-60 | -1.69E-46 |
| MS.gene056933 | MS.gene78462 | 0.84626 | 2.43E-59 | -1.69E-46 |
| MS.gene056935 | MS.gene78462 | 0.839546 | 1.49E-57 | -1.69E-46 |
| MS.gene05702 | MS.gene78462 | 0.839254 | 1.77E-57 | -1.69E-46 |
| MS.gene057121 | MS.gene78462 | 0.828841 | 7.18E-55 | -1.69E-46 |
| MS.gene057245 | MS.gene78462 | 0.804776 | 1.84E-49 | -1.69E-46 |
| MS.gene05733 | MS.gene78462 | 0.801889 | 7.28E-49 | -1.69E-46 |
| MS.gene057448 | MS.gene78462 | 0.813352 | 2.67E-51 | -1.69E-46 |
| MS.gene057449 | MS.gene78462 | 0.815791 | 7.72E-52 | -1.69E-46 |
| MS.gene057450 | MS.gene78462 | 0.8154 | 9.43E-52 | -1.69E-46 |
| MS.gene057469 | MS.gene78462 | 0.840571 | 8.03E-58 | -1.69E-46 |
| MS.gene057476 | MS.gene78462 | 0.802652 | 5.07E-49 | -1.69E-46 |
| MS.gene057749 | MS.gene78462 | 0.825649 | 4.18E-54 | -1.69E-46 |
| MS.gene057823 | MS.gene78462 | 0.813539 | 2.43E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene78462 | 0.843069 | 1.76E-58 | -1.69E-46 |
| MS.gene05811 | MS.gene78462 | 0.847689 | 9.87E-60 | -1.69E-46 |
| MS.gene05842 | MS.gene78462 | 0.833166 | 6.23E-56 | -1.69E-46 |
| MS.gene058660 | MS.gene78462 | 0.845842 | 3.16E-59 | -1.69E-46 |
| MS.gene05886 | MS.gene78462 | 0.826675 | 2.38E-54 | -1.69E-46 |
| MS.gene058928 | MS.gene78462 | 0.810761 | 9.81E-51 | -1.69E-46 |
| MS.gene058949 | MS.gene78462 | 0.80001 | 1.76E-48 | -1.69E-46 |
| MS.gene058995 | MS.gene78462 | 0.819841 | 9.40E-53 | -1.69E-46 |
| MS.gene05907 | MS.gene78462 | 0.881717 | 1.90E-70 | -1.69E-46 |
| MS.gene059082 | MS.gene78462 | 0.801494 | 8.77E-49 | -1.69E-46 |
| MS.gene059294 | MS.gene78462 | 0.843833 | 1.10E-58 | -1.69E-46 |
| MS.gene059420 | MS.gene78462 | 0.82723 | 1.76E-54 | -1.69E-46 |
| MS.gene059462 | MS.gene78462 | 0.814313 | 1.64E-51 | -1.69E-46 |
| MS.gene059518 | MS.gene78462 | 0.806707 | 7.22E-50 | -1.69E-46 |
| MS.gene059597 | MS.gene78462 | 0.802595 | 5.21E-49 | -1.69E-46 |
| MS.gene059676 | MS.gene78462 | 0.814422 | 1.55E-51 | -1.69E-46 |
| MS.gene059688 | MS.gene78462 | 0.818282 | 2.13E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene78462 | 0.814611 | 1.41E-51 | -1.69E-46 |
| MS.gene059695 | MS.gene78462 | 0.811878 | 5.62E-51 | -1.69E-46 |
| MS.gene05984 | MS.gene78462 | 0.847122 | 1.41E-59 | -1.69E-46 |
| MS.gene059894 | MS.gene78462 | 0.819056 | 1.42E-52 | -1.69E-46 |
| MS.gene059974 | MS.gene78462 | 0.826561 | 2.54E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene78462 | 0.823522 | 1.32E-53 | -1.69E-46 |
| MS.gene06037 | MS.gene78462 | 0.839407 | 1.61E-57 | -1.69E-46 |
| MS.gene060559 | MS.gene78462 | 0.854868 | 9.24E-62 | -1.69E-46 |
| MS.gene060986 | MS.gene78462 | 0.825763 | 3.93E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene78462 | 0.848317 | 6.62E-60 | -1.69E-46 |
| MS.gene061051 | MS.gene78462 | -0.815979 | 7.00E-52 | -1.69E-46 |
| MS.gene061071 | MS.gene78462 | 0.811305 | 7.48E-51 | -1.69E-46 |
| MS.gene061159 | MS.gene78462 | 0.813 | 3.19E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78462.t1 | MTR_7g067380 | 85.141 | 498 | 19 | 3 | 1 | 443 | 1 | 498 | 0.0 | 834 |
| MS.gene78462.t1 | MTR_4g415290 | 74.141 | 495 | 71 | 4 | 3 | 441 | 1 | 494 | 0.0 | 701 |
| MS.gene78462.t1 | MTR_8g030620 | 56.301 | 492 | 155 | 6 | 7 | 438 | 8 | 499 | 0.0 | 547 |
| MS.gene78462.t1 | MTR_1g040500 | 50.507 | 493 | 183 | 4 | 11 | 443 | 7 | 498 | 2.97e-169 | 487 |
| MS.gene78462.t1 | MTR_5g080360 | 47.257 | 474 | 186 | 4 | 24 | 436 | 2 | 472 | 2.43e-138 | 406 |
| MS.gene78462.t1 | MTR_3g448430 | 43.606 | 477 | 202 | 8 | 19 | 436 | 43 | 511 | 7.53e-127 | 377 |
| MS.gene78462.t1 | MTR_1g086650 | 38.508 | 496 | 232 | 11 | 9 | 441 | 49 | 534 | 7.91e-101 | 311 |
| MS.gene78462.t1 | MTR_3g048330 | 58.879 | 214 | 85 | 1 | 230 | 440 | 64 | 277 | 8.89e-86 | 264 |
| MS.gene78462.t1 | MTR_5g091660 | 60.870 | 207 | 80 | 1 | 230 | 436 | 324 | 529 | 2.33e-82 | 263 |
| MS.gene78462.t1 | MTR_5g091660 | 41.117 | 197 | 107 | 4 | 19 | 214 | 60 | 248 | 1.09e-37 | 144 |
| MS.gene78462.t1 | MTR_5g061520 | 56.281 | 199 | 86 | 1 | 244 | 441 | 288 | 486 | 4.93e-73 | 238 |
| MS.gene78462.t1 | MTR_5g061520 | 36.735 | 147 | 89 | 2 | 10 | 156 | 2 | 144 | 1.91e-21 | 97.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78462.t1 | AT2G38110 | 68.219 | 494 | 98 | 4 | 7 | 442 | 8 | 500 | 0.0 | 652 |
| MS.gene78462.t1 | AT4G00400 | 55.714 | 490 | 156 | 5 | 7 | 438 | 8 | 494 | 6.63e-180 | 512 |
| MS.gene78462.t1 | AT1G01610 | 55.419 | 489 | 156 | 6 | 9 | 438 | 10 | 495 | 1.90e-179 | 511 |
| MS.gene78462.t1 | AT3G11430 | 48.000 | 475 | 185 | 5 | 22 | 436 | 9 | 481 | 1.18e-138 | 407 |
| MS.gene78462.t1 | AT5G06090 | 44.676 | 479 | 203 | 4 | 18 | 436 | 3 | 479 | 8.16e-129 | 382 |
| MS.gene78462.t1 | AT3G11325 | 40.831 | 409 | 191 | 10 | 34 | 436 | 9 | 372 | 9.53e-88 | 273 |
| MS.gene78462.t1 | AT3G11325 | 40.831 | 409 | 191 | 10 | 34 | 436 | 6 | 369 | 1.66e-87 | 272 |
| MS.gene78462.t1 | AT1G06520 | 62.051 | 195 | 74 | 0 | 242 | 436 | 390 | 584 | 1.51e-81 | 263 |
| MS.gene78462.t1 | AT1G06520 | 36.726 | 226 | 120 | 9 | 18 | 226 | 98 | 317 | 9.48e-30 | 122 |
| MS.gene78462.t1 | AT1G02390 | 33.977 | 518 | 254 | 13 | 2 | 439 | 21 | 530 | 7.41e-81 | 259 |
| MS.gene78462.t1 | AT4G01950 | 55.959 | 193 | 83 | 2 | 246 | 436 | 325 | 517 | 8.12e-64 | 214 |
| MS.gene78462.t1 | AT4G01950 | 28.452 | 239 | 147 | 9 | 2 | 226 | 19 | 247 | 1.71e-17 | 85.1 |
| MS.gene78462.t1 | AT4G01950 | 55.959 | 193 | 83 | 2 | 246 | 436 | 353 | 545 | 1.84e-63 | 214 |
| MS.gene78462.t1 | AT4G01950 | 28.452 | 239 | 147 | 9 | 2 | 226 | 47 | 275 | 2.13e-17 | 85.1 |
Find 109 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGTCTAATTTGCCTGATT+TGG | 0.196119 | 7.1:+34232256 | MS.gene78462:CDS |
| TGGAATGTGTTCAATTCTTT+TGG | 0.207233 | 7.1:+34232047 | MS.gene78462:CDS |
| CCACTAACTGTAAGCTCTTT+AGG | 0.240056 | 7.1:-34235231 | None:intergenic |
| GGATTCATGAACACAAAATA+AGG | 0.242717 | 7.1:-34235171 | None:intergenic |
| CCCAGTTGCCCTTCCCGATT+TGG | 0.258883 | 7.1:-34232171 | None:intergenic |
| GAAAGTGCCACTGCTTTAAT+TGG | 0.262083 | 7.1:-34234934 | None:intergenic |
| AGTGGATCACATTTAATTCT+TGG | 0.268820 | 7.1:-34234550 | None:intergenic |
| CAGTCTAATTTGCCTGATTT+GGG | 0.282394 | 7.1:+34232257 | MS.gene78462:CDS |
| TCTTCTGCAGGAAGGGTATA+TGG | 0.292221 | 7.1:+34234525 | MS.gene78462:intron |
| AGGAGCCTGGTGTTCTTGTT+GGG | 0.300559 | 7.1:+34232201 | MS.gene78462:CDS |
| ACCAAATCGGGAAGGGCAAC+TGG | 0.300938 | 7.1:+34232170 | MS.gene78462:CDS |
| GAATTGTTGTACTTTGAAAT+TGG | 0.303441 | 7.1:-34231729 | None:intergenic |
| GGACTTAGAAGTTTAGTTCT+TGG | 0.323980 | 7.1:-34234574 | None:intergenic |
| ATTCCCTTACTACATGCTTA+TGG | 0.355427 | 7.1:+34231818 | MS.gene78462:CDS |
| CCTAAAGAGCTTACAGTTAG+TGG | 0.359503 | 7.1:+34235231 | MS.gene78462:CDS |
| TATATTCAAAGGGTTCTTGC+TGG | 0.360292 | 7.1:+34235282 | MS.gene78462:CDS |
| TTGGGAGGTGATAAGGTGAT+TGG | 0.362715 | 7.1:+34232131 | MS.gene78462:CDS |
| AGGAATCAAAGTAATTGTTA+AGG | 0.363357 | 7.1:+34234756 | MS.gene78462:intron |
| TCCCTACAAGTCGTTCCTTC+CGG | 0.364576 | 7.1:-34235024 | None:intergenic |
| GTGGTTACAGCAGTTGCATT+AGG | 0.369985 | 7.1:+34234856 | MS.gene78462:CDS |
| CGATGGTTTCTGAGACAAAA+AGG | 0.373974 | 7.1:-34231911 | None:intergenic |
| ACGTCCTCAGCGTAGAATTT+CGG | 0.374562 | 7.1:-34232011 | None:intergenic |
| GCACCAAGAAAAGGTCAAAA+AGG | 0.382407 | 7.1:+34234793 | MS.gene78462:CDS |
| GATAAGTATGCTATGCTTGC+TGG | 0.385223 | 7.1:+34235342 | MS.gene78462:CDS |
| ATTAACCGATAGGATTGTTC+CGG | 0.386364 | 7.1:+34235083 | MS.gene78462:CDS |
| AAGGAGCCTGGTGTTCTTGT+TGG | 0.388349 | 7.1:+34232200 | MS.gene78462:CDS |
| GTAAGAGGATGATTCCTCTT+AGG | 0.390189 | 7.1:-34231860 | None:intergenic |
| GGAATCAAAGTAATTGTTAA+GGG | 0.391051 | 7.1:+34234757 | MS.gene78462:intron |
| GAATTTGTTGGGAGGTGATA+AGG | 0.394560 | 7.1:+34232124 | MS.gene78462:CDS |
| AAGGGCAACTGGGTTTGTTA+AGG | 0.407100 | 7.1:+34232181 | MS.gene78462:CDS |
| CCCAACAAATTCTTAACAAA+TGG | 0.410137 | 7.1:-34232113 | None:intergenic |
| TCTTAGGAAACTACCGGCTT+CGG | 0.414793 | 7.1:-34231844 | None:intergenic |
| AGGGTTCTTGCTGGAACACT+TGG | 0.417445 | 7.1:+34235291 | MS.gene78462:CDS |
| ATAAATACTAACCTTGCAAA+TGG | 0.421413 | 7.1:-34232315 | None:intergenic |
| CCATTTGTTAAGAATTTGTT+GGG | 0.427000 | 7.1:+34232113 | MS.gene78462:CDS |
| TGAACTTGAGGTGACCAAAT+CGG | 0.429869 | 7.1:+34232157 | MS.gene78462:CDS |
| CTATCTCCCAGTCCCAAATC+AGG | 0.435448 | 7.1:-34232269 | None:intergenic |
| AGAAGTTTAGTTCTTGGTAG+TGG | 0.438170 | 7.1:-34234568 | None:intergenic |
| GAACTTGAGGTGACCAAATC+GGG | 0.438703 | 7.1:+34232158 | MS.gene78462:CDS |
| TAATTTGCCTGATTTGGGAC+TGG | 0.444415 | 7.1:+34232262 | MS.gene78462:CDS |
| ACTGGGTTTGTTAAGGAGCC+TGG | 0.448681 | 7.1:+34232188 | MS.gene78462:CDS |
| GCCATTTGTTAAGAATTTGT+TGG | 0.451477 | 7.1:+34232112 | MS.gene78462:CDS |
| AATTTGCCTGATTTGGGACT+GGG | 0.452524 | 7.1:+34232263 | MS.gene78462:CDS |
| TGTTTCGTGTTAATTGCAAC+CGG | 0.459361 | 7.1:-34235102 | None:intergenic |
| CAGTGGCACTTTCAAGAGAA+AGG | 0.461557 | 7.1:+34234944 | MS.gene78462:CDS |
| TGAAAGGGACGGGGAGTAAG+AGG | 0.462225 | 7.1:-34231875 | None:intergenic |
| TGGGAGGTGATAAGGTGATT+GGG | 0.468031 | 7.1:+34232132 | MS.gene78462:CDS |
| GCGCTGAATCGTAGAAGAAA+TGG | 0.469194 | 7.1:-34235048 | None:intergenic |
| TTGAACACATTCCACGTCTC+AGG | 0.473991 | 7.1:-34232038 | None:intergenic |
| GTCCGGAAGGAACGACTTGT+AGG | 0.474603 | 7.1:+34235022 | MS.gene78462:CDS |
| GATTCATGAACACAAAATAA+GGG | 0.476303 | 7.1:-34235170 | None:intergenic |
| ATGCTTATGGCTACCGAAGC+CGG | 0.481581 | 7.1:+34231831 | MS.gene78462:CDS |
| GTGAAATATATGAAAGGGAC+GGG | 0.485153 | 7.1:-34231885 | None:intergenic |
| CACGGCTAGTCCAAGGTTGA+TGG | 0.489858 | 7.1:+34232085 | MS.gene78462:CDS |
| CTAAGTCAGATGCAACGGTT+TGG | 0.489913 | 7.1:-34231767 | None:intergenic |
| ACTTTGAAATTGGTTTGAAA+TGG | 0.491494 | 7.1:-34231719 | None:intergenic |
| ACCGTTGCATCTGACTTAGA+TGG | 0.496852 | 7.1:+34231771 | MS.gene78462:CDS |
| TGCTTGCTGGTACAGATGGT+AGG | 0.502496 | 7.1:+34235355 | MS.gene78462:CDS |
| AGTTGCAAATTATATTCAAA+GGG | 0.504087 | 7.1:+34235272 | MS.gene78462:CDS |
| AAGTTGCAAATTATATTCAA+AGG | 0.504845 | 7.1:+34235271 | MS.gene78462:CDS |
| GGAGCCTGGTGTTCTTGTTG+GGG | 0.507561 | 7.1:+34232202 | MS.gene78462:CDS |
| AATGGCTCCACCATCAACCT+TGG | 0.511121 | 7.1:-34232095 | None:intergenic |
| ATAAGGAAATTACTTGAAGA+AGG | 0.512819 | 7.1:+34234985 | MS.gene78462:CDS |
| TTGATCTTCATAACCTTCGC+AGG | 0.513177 | 7.1:+34231945 | MS.gene78462:CDS |
| CCTCCACCAGCACCAAGAAA+AGG | 0.520944 | 7.1:+34234784 | MS.gene78462:CDS |
| ACGTTGTCACGGCTAGTCCA+AGG | 0.524082 | 7.1:+34232078 | MS.gene78462:CDS |
| TGACTTTATGTCCATTTGCA+AGG | 0.526303 | 7.1:+34232304 | MS.gene78462:CDS |
| GGTACGTGAAATATATGAAA+GGG | 0.527101 | 7.1:-34231890 | None:intergenic |
| GTGATCTCATAAGTAGGCAC+TGG | 0.528002 | 7.1:-34235192 | None:intergenic |
| GCTTGCTGGTACAGATGGTA+GGG | 0.533473 | 7.1:+34235356 | MS.gene78462:CDS |
| ATGACGTGGAGATGGTTTCA+AGG | 0.541289 | 7.1:+34231979 | MS.gene78462:CDS |
| AGTGGCACTTTCAAGAGAAA+GGG | 0.541416 | 7.1:+34234945 | MS.gene78462:CDS |
| AAGAATGTGATCTCATAAGT+AGG | 0.541733 | 7.1:-34235198 | None:intergenic |
| TCCGGAAGGAACGACTTGTA+GGG | 0.542140 | 7.1:+34235023 | MS.gene78462:CDS |
| GTAGCCATAAGCATGTAGTA+AGG | 0.544461 | 7.1:-34231822 | None:intergenic |
| GCTATGCTTGCTGGTACAGA+TGG | 0.544625 | 7.1:+34235351 | MS.gene78462:CDS |
| TGGTAGGGTTCCATCTAAGA+AGG | 0.546476 | 7.1:+34235371 | MS.gene78462:CDS |
| GATTCCTCTTAGGAAACTAC+CGG | 0.549927 | 7.1:-34231850 | None:intergenic |
| GAAGATCAATGACGTGGAGA+TGG | 0.550046 | 7.1:+34231971 | MS.gene78462:CDS |
| AGGTGACCTAGTGATTTGTC+CGG | 0.552254 | 7.1:+34235005 | MS.gene78462:CDS |
| AGGTACGTGAAATATATGAA+AGG | 0.567264 | 7.1:-34231891 | None:intergenic |
| AGCTCCCCAACAAGAACACC+AGG | 0.567606 | 7.1:-34232206 | None:intergenic |
| AATGCAACTGCTGTAACCAC+AGG | 0.568227 | 7.1:-34234853 | None:intergenic |
| GGTCCGCGGACACAAAGTAT+TGG | 0.584467 | 7.1:+34235146 | MS.gene78462:CDS |
| TGGAAAGCGTTACGTTGTCA+CGG | 0.586333 | 7.1:+34232067 | MS.gene78462:CDS |
| CCAAATCGGGAAGGGCAACT+GGG | 0.587982 | 7.1:+34232171 | MS.gene78462:CDS |
| TGAGGTGACCAAATCGGGAA+GGG | 0.590584 | 7.1:+34232163 | MS.gene78462:CDS |
| AGGACGTGCGTCCTGAGACG+TGG | 0.599900 | 7.1:+34232027 | MS.gene78462:CDS |
| GGCTAGTCCAAGGTTGATGG+TGG | 0.602655 | 7.1:+34232088 | MS.gene78462:CDS |
| GCCATCTAAGTCAGATGCAA+CGG | 0.603277 | 7.1:-34231772 | None:intergenic |
| GAAGCCGGTAGTTTCCTAAG+AGG | 0.606044 | 7.1:+34231846 | MS.gene78462:CDS |
| TAGCCATAAGCATGTAGTAA+GGG | 0.612096 | 7.1:-34231821 | None:intergenic |
| TGCAACCGGAACAATCCTAT+CGG | 0.612877 | 7.1:-34235088 | None:intergenic |
| ATTGATCTTCAGACCTGCGA+AGG | 0.614008 | 7.1:-34231958 | None:intergenic |
| AATTTCACCAATTAAAGCAG+TGG | 0.621079 | 7.1:+34234927 | MS.gene78462:CDS |
| TTGAGGTGACCAAATCGGGA+AGG | 0.622614 | 7.1:+34232162 | MS.gene78462:CDS |
| TTGAATGTACTAATTTAACA+AGG | 0.629478 | 7.1:+34235316 | MS.gene78462:CDS |
| TTTGTTAAGAATTTGTTGGG+AGG | 0.632297 | 7.1:+34232116 | MS.gene78462:CDS |
| CGTGAAATATATGAAAGGGA+CGG | 0.639326 | 7.1:-34231886 | None:intergenic |
| TTCCTTCCGGACAAATCACT+AGG | 0.648813 | 7.1:-34235011 | None:intergenic |
| AAAGAGCTTACAGTTAGTGG+AGG | 0.649872 | 7.1:+34235234 | MS.gene78462:CDS |
| GGTCCAATACTTTGTGTCCG+CGG | 0.653361 | 7.1:-34235149 | None:intergenic |
| ATGCAACTGCTGTAACCACA+GGG | 0.660790 | 7.1:-34234852 | None:intergenic |
| CAGGGTCTAAAATTGTGCGA+TGG | 0.669842 | 7.1:-34234834 | None:intergenic |
| GACCTAGTGATTTGTCCGGA+AGG | 0.669947 | 7.1:+34235009 | MS.gene78462:CDS |
| GGTGATTGGGACTGAACTTG+AGG | 0.678672 | 7.1:+34232145 | MS.gene78462:CDS |
| TGAAATATATGAAAGGGACG+GGG | 0.702382 | 7.1:-34231884 | None:intergenic |
| AGGTCTGAAGATCAATGACG+TGG | 0.721416 | 7.1:+34231965 | MS.gene78462:CDS |
| GTTGCCGAAATTCTACGCTG+AGG | 0.727019 | 7.1:+34232007 | MS.gene78462:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTATATAATTTTAAATTT+TGG | + | chr7.1:34232956-34232975 | MS.gene78462:intron | 0.0% |
| !! | CAACATTATAAATTTAATTA+AGG | + | chr7.1:34234252-34234271 | MS.gene78462:intron | 10.0% |
| !! | CTAAATTTAGAAATTAAATT+TGG | - | chr7.1:34233632-34233651 | None:intergenic | 10.0% |
| !! | CTTAATTAAATTTATAATGT+TGG | - | chr7.1:34234254-34234273 | None:intergenic | 10.0% |
| !!! | CAAATTTAATTTCTAAATTT+AGG | + | chr7.1:34233630-34233649 | MS.gene78462:intron | 10.0% |
| !! | AAAAAAGAATAATACAATAG+AGG | - | chr7.1:34233424-34233443 | None:intergenic | 15.0% |
| !! | AAAAAGAATAATACAATAGA+GGG | - | chr7.1:34233423-34233442 | None:intergenic | 15.0% |
| !! | AAATTTGTAAACATTAAGTT+GGG | - | chr7.1:34234041-34234060 | None:intergenic | 15.0% |
| !! | AATATATTTGAAGAAAAGTT+AGG | - | chr7.1:34232371-34232390 | None:intergenic | 15.0% |
| !! | TAAACAATTATCAAAATGAA+TGG | + | chr7.1:34233978-34233997 | MS.gene78462:intron | 15.0% |
| !! | TAAATTTGTAAACATTAAGT+TGG | - | chr7.1:34234042-34234061 | None:intergenic | 15.0% |
| !! | TATTAATTCCTTAATACTTT+AGG | + | chr7.1:34232991-34233010 | MS.gene78462:intron | 15.0% |
| !! | TCTAAATTTAAATTGATGTT+TGG | + | chr7.1:34233295-34233314 | MS.gene78462:intron | 15.0% |
| !! | TGTTTAGTTATATATGTATA+TGG | - | chr7.1:34232885-34232904 | None:intergenic | 15.0% |
| !! | TTAATATATTTGTGTCTAAA+TGG | - | chr7.1:34232507-34232526 | None:intergenic | 15.0% |
| !!! | ATTTTCCATATGTATATATA+AGG | - | chr7.1:34232669-34232688 | None:intergenic | 15.0% |
| !!! | CATATGACTAATTTATTTTT+TGG | + | chr7.1:34234109-34234128 | MS.gene78462:intron | 15.0% |
| !!! | TCTTATAAATTTGTTTTGAA+AGG | + | chr7.1:34233813-34233832 | MS.gene78462:intron | 15.0% |
| !!! | TTCAACTTAATTTCTATTTT+CGG | + | chr7.1:34233192-34233211 | MS.gene78462:intron | 15.0% |
| !!! | TTTTCCATATGTATATATAA+GGG | - | chr7.1:34232668-34232687 | None:intergenic | 15.0% |
| !! | AAAAGAATAATACAATAGAG+GGG | - | chr7.1:34233422-34233441 | None:intergenic | 20.0% |
| !! | AAGTTGCAAATTATATTCAA+AGG | + | chr7.1:34235271-34235290 | MS.gene78462:CDS | 20.0% |
| !! | ACTTATAACTCACAATAATT+AGG | - | chr7.1:34233599-34233618 | None:intergenic | 20.0% |
| !! | AGTTGCAAATTATATTCAAA+GGG | + | chr7.1:34235272-34235291 | MS.gene78462:CDS | 20.0% |
| !! | ATCACAACAAATGAAATAAA+TGG | + | chr7.1:34233120-34233139 | MS.gene78462:intron | 20.0% |
| !! | CAATTAAGTTATATGATGAT+AGG | - | chr7.1:34233897-34233916 | None:intergenic | 20.0% |
| !! | CTAAAGTCTCAAATTTAAAT+AGG | + | chr7.1:34234405-34234424 | MS.gene78462:intron | 20.0% |
| !! | CTTATAACTCACAATAATTA+GGG | - | chr7.1:34233598-34233617 | None:intergenic | 20.0% |
| !! | TGGTACAATTATAAACTATT+AGG | + | chr7.1:34234736-34234755 | MS.gene78462:intron | 20.0% |
| !! | TTAAGAAAAGTTACTAAGAT+AGG | - | chr7.1:34233246-34233265 | None:intergenic | 20.0% |
| !! | TTGAATGTACTAATTTAACA+AGG | + | chr7.1:34235316-34235335 | MS.gene78462:CDS | 20.0% |
| !!! | AATAGTTGGCAAATTTTAAT+TGG | + | chr7.1:34232729-34232748 | MS.gene78462:intron | 20.0% |
| !!! | AGAATTTTTCAAGAAATAGT+TGG | + | chr7.1:34232715-34232734 | MS.gene78462:intron | 20.0% |
| !!! | ATAAATAAGAGTATAGAGTA+TGG | - | chr7.1:34233477-34233496 | None:intergenic | 20.0% |
| !!! | ATACTCTATACTCTTATTTA+TGG | + | chr7.1:34233476-34233495 | MS.gene78462:intron | 20.0% |
| !!! | CAATTCATATGACAAATTTT+CGG | + | chr7.1:34234134-34234153 | MS.gene78462:intron | 20.0% |
| ! | AAAAAGATGCAGCAAATATA+AGG | + | chr7.1:34234968-34234987 | MS.gene78462:CDS | 25.0% |
| ! | AATGATAATAAGGCAACAAT+AGG | - | chr7.1:34234640-34234659 | None:intergenic | 25.0% |
| ! | AGGAATCAAAGTAATTGTTA+AGG | + | chr7.1:34234756-34234775 | MS.gene78462:intron | 25.0% |
| ! | ATAAATACTAACCTTGCAAA+TGG | - | chr7.1:34232318-34232337 | None:intergenic | 25.0% |
| ! | ATAAGGAAATTACTTGAAGA+AGG | + | chr7.1:34234985-34235004 | MS.gene78462:CDS | 25.0% |
| ! | ATAGAAACAAAATATGGAAG+TGG | - | chr7.1:34233375-34233394 | None:intergenic | 25.0% |
| ! | ATTTAAATAGGTGAGAATAG+AGG | + | chr7.1:34234417-34234436 | MS.gene78462:intron | 25.0% |
| ! | CATAATACTTTCCATCTTAA+GGG | + | chr7.1:34234678-34234697 | MS.gene78462:intron | 25.0% |
| ! | GAAAAGTTAGGAACATATAT+AGG | - | chr7.1:34232359-34232378 | None:intergenic | 25.0% |
| ! | GAAGAAAATAGTTAATGACT+TGG | - | chr7.1:34234510-34234529 | None:intergenic | 25.0% |
| ! | GAGAGAATAGAAACAAAATA+TGG | - | chr7.1:34233381-34233400 | None:intergenic | 25.0% |
| ! | GATTCATGAACACAAAATAA+GGG | - | chr7.1:34235173-34235192 | None:intergenic | 25.0% |
| ! | GGAATCAAAGTAATTGTTAA+GGG | + | chr7.1:34234757-34234776 | MS.gene78462:intron | 25.0% |
| ! | GTTTCCCTTATATATACATA+TGG | + | chr7.1:34232661-34232680 | MS.gene78462:intron | 25.0% |
| !! | AAGTCCAATAATTTTTCATG+AGG | + | chr7.1:34234591-34234610 | MS.gene78462:intron | 25.0% |
| !! | AGTCCAATAATTTTTCATGA+GGG | + | chr7.1:34234592-34234611 | MS.gene78462:intron | 25.0% |
| !! | ATTGGATTTTATGTTCAAAG+TGG | - | chr7.1:34233690-34233709 | None:intergenic | 25.0% |
| !! | CCATTTGTTAAGAATTTGTT+GGG | + | chr7.1:34232113-34232132 | MS.gene78462:CDS | 25.0% |
| !! | TAATTGAGCTAGTTTCTAAT+TGG | - | chr7.1:34234207-34234226 | None:intergenic | 25.0% |
| !! | TAATTTCTATTTTCGGAAGA+AGG | + | chr7.1:34233199-34233218 | MS.gene78462:intron | 25.0% |
| !! | TATGAAGATCAACATTTTGA+TGG | - | chr7.1:34231937-34231956 | None:intergenic | 25.0% |
| !! | TTGGATTTTATGTTCAAAGT+GGG | - | chr7.1:34233689-34233708 | None:intergenic | 25.0% |
| !!! | ACTTTGAAATTGGTTTGAAA+TGG | - | chr7.1:34231722-34231741 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTCTATTCTCTCA+CGG | + | chr7.1:34233382-34233401 | MS.gene78462:intron | 25.0% |
| !!! | CATTGAGCTTTAAATTTGTA+CGG | - | chr7.1:34233940-34233959 | None:intergenic | 25.0% |
| !!! | GAATTGTTGTACTTTGAAAT+TGG | - | chr7.1:34231732-34231751 | None:intergenic | 25.0% |
| !!! | TTATAATGTTGGTTCAACTT+CGG | - | chr7.1:34234243-34234262 | None:intergenic | 25.0% |
| AAGAATGTGATCTCATAAGT+AGG | - | chr7.1:34235201-34235220 | None:intergenic | 30.0% | |
| AATACAGAGTGGCATATAAA+AGG | - | chr7.1:34233519-34233538 | None:intergenic | 30.0% | |
| AATTTCACCAATTAAAGCAG+TGG | + | chr7.1:34234927-34234946 | MS.gene78462:CDS | 30.0% | |
| AGAAAAGTTACTAAGATAGG+TGG | - | chr7.1:34233243-34233262 | None:intergenic | 30.0% | |
| AGGTACGTGAAATATATGAA+AGG | - | chr7.1:34231894-34231913 | None:intergenic | 30.0% | |
| AGTGGATCACATTTAATTCT+TGG | - | chr7.1:34234553-34234572 | None:intergenic | 30.0% | |
| AGTTATATGATGATAGGCTA+TGG | - | chr7.1:34233891-34233910 | None:intergenic | 30.0% | |
| ATTTATATAGTTGTGCATGC+TGG | + | chr7.1:34234057-34234076 | MS.gene78462:intron | 30.0% | |
| CCCAACAAATTCTTAACAAA+TGG | - | chr7.1:34232116-34232135 | None:intergenic | 30.0% | |
| CTACCCTCATGAAAAATTAT+TGG | - | chr7.1:34234598-34234617 | None:intergenic | 30.0% | |
| GCATAATACTTTCCATCTTA+AGG | + | chr7.1:34234677-34234696 | MS.gene78462:intron | 30.0% | |
| GGATTCATGAACACAAAATA+AGG | - | chr7.1:34235174-34235193 | None:intergenic | 30.0% | |
| GGTACGTGAAATATATGAAA+GGG | - | chr7.1:34231893-34231912 | None:intergenic | 30.0% | |
| TAGCCATAGGAATGATAATA+AGG | - | chr7.1:34234650-34234669 | None:intergenic | 30.0% | |
| TAGGGTTTGAAAGTAGTTAA+GGG | - | chr7.1:34233580-34233599 | None:intergenic | 30.0% | |
| TGAATGTTTCTCTTACTAGA+AGG | - | chr7.1:34234091-34234110 | None:intergenic | 30.0% | |
| TGTTGTGATCTTAAAAACCA+TGG | - | chr7.1:34233109-34233128 | None:intergenic | 30.0% | |
| TTAGGGTTTGAAAGTAGTTA+AGG | - | chr7.1:34233581-34233600 | None:intergenic | 30.0% | |
| TTCAACTTCGGAAAATATGA+TGG | - | chr7.1:34234231-34234250 | None:intergenic | 30.0% | |
| ! | AAGTGTGTTTTATGGTACAA+CGG | + | chr7.1:34235125-34235144 | MS.gene78462:CDS | 30.0% |
| ! | ACGAAACAAAGTGTGTTTTA+TGG | + | chr7.1:34235117-34235136 | MS.gene78462:CDS | 30.0% |
| ! | AGGGTTGCAATTTTTAATCA+TGG | + | chr7.1:34234272-34234291 | MS.gene78462:intron | 30.0% |
| ! | ATAAGAGTATAGAGTATGGA+TGG | - | chr7.1:34233473-34233492 | None:intergenic | 30.0% |
| ! | CATTAACTATTTTCTTCTGC+AGG | + | chr7.1:34234513-34234532 | MS.gene78462:intron | 30.0% |
| ! | GCCATTTGTTAAGAATTTGT+TGG | + | chr7.1:34232112-34232131 | MS.gene78462:CDS | 30.0% |
| ! | TGGAATGTGTTCAATTCTTT+TGG | + | chr7.1:34232047-34232066 | MS.gene78462:CDS | 30.0% |
| ! | TGTGATGTCCTAAAGTATTA+AGG | - | chr7.1:34233002-34233021 | None:intergenic | 30.0% |
| ! | TTGCCTTATTATCATTCCTA+TGG | + | chr7.1:34234644-34234663 | MS.gene78462:intron | 30.0% |
| ! | TTGTCCAAGATTTTCTTTGA+GGG | + | chr7.1:34232449-34232468 | MS.gene78462:intron | 30.0% |
| ! | TTTGTCCAAGATTTTCTTTG+AGG | + | chr7.1:34232448-34232467 | MS.gene78462:intron | 30.0% |
| !! | ATGGAAAGTATTATGCCAAT+TGG | - | chr7.1:34234673-34234692 | None:intergenic | 30.0% |
| !! | TTTGTTAAGAATTTGTTGGG+AGG | + | chr7.1:34232116-34232135 | MS.gene78462:CDS | 30.0% |
| !!! | CAAGCAATTTTTTCTGGTAA+GGG | - | chr7.1:34234718-34234737 | None:intergenic | 30.0% |
| !!! | TTGTACCAAGCAATTTTTTC+TGG | - | chr7.1:34234724-34234743 | None:intergenic | 30.0% |
| AAAATATGGAAGTGGAAGAG+AGG | - | chr7.1:34233367-34233386 | None:intergenic | 35.0% | |
| AACACCCTCAAAGAAAATCT+TGG | - | chr7.1:34232456-34232475 | None:intergenic | 35.0% | |
| AACATGGGCAACAAAATACA+AGG | - | chr7.1:34233713-34233732 | None:intergenic | 35.0% | |
| AATAAGGCAACAATAGGTGT+TGG | - | chr7.1:34234634-34234653 | None:intergenic | 35.0% | |
| AATATTTACCACCATGCATG+TGG | + | chr7.1:34233446-34233465 | MS.gene78462:intron | 35.0% | |
| ACACCCTTGTATCTTTAACA+TGG | - | chr7.1:34233729-34233748 | None:intergenic | 35.0% | |
| ACGTTGAATGAGATTTAGTG+GGG | + | chr7.1:34233780-34233799 | MS.gene78462:intron | 35.0% | |
| ATATGATGATAGGCTATGGT+GGG | - | chr7.1:34233887-34233906 | None:intergenic | 35.0% | |
| ATCTTAACGTTGTACAGTTG+TGG | + | chr7.1:34233082-34233101 | MS.gene78462:intron | 35.0% | |
| ATTAACCGATAGGATTGTTC+CGG | + | chr7.1:34235083-34235102 | MS.gene78462:CDS | 35.0% | |
| ATTCCCTTACTACATGCTTA+TGG | + | chr7.1:34231818-34231837 | MS.gene78462:CDS | 35.0% | |
| CACCCTTGTATCTTTAACAT+GGG | - | chr7.1:34233728-34233747 | None:intergenic | 35.0% | |
| CACGTTGAATGAGATTTAGT+GGG | + | chr7.1:34233779-34233798 | MS.gene78462:intron | 35.0% | |
| CCTTACCAGAAAAAATTGCT+TGG | + | chr7.1:34234716-34234735 | MS.gene78462:intron | 35.0% | |
| CGTGAAATATATGAAAGGGA+CGG | - | chr7.1:34231889-34231908 | None:intergenic | 35.0% | |
| GTGAAATATATGAAAGGGAC+GGG | - | chr7.1:34231888-34231907 | None:intergenic | 35.0% | |
| GTTTAGGTATACCCTTAAGA+TGG | - | chr7.1:34234692-34234711 | None:intergenic | 35.0% | |
| TACTCAACTGAAATACAGAG+TGG | - | chr7.1:34233530-34233549 | None:intergenic | 35.0% | |
| TAGCCATAAGCATGTAGTAA+GGG | - | chr7.1:34231824-34231843 | None:intergenic | 35.0% | |
| TATATGATGATAGGCTATGG+TGG | - | chr7.1:34233888-34233907 | None:intergenic | 35.0% | |
| TATATTCAAAGGGTTCTTGC+TGG | + | chr7.1:34235282-34235301 | MS.gene78462:CDS | 35.0% | |
| TCACGTTGAATGAGATTTAG+TGG | + | chr7.1:34233778-34233797 | MS.gene78462:intron | 35.0% | |
| TGAAATATATGAAAGGGACG+GGG | - | chr7.1:34231887-34231906 | None:intergenic | 35.0% | |
| TGACTTTATGTCCATTTGCA+AGG | + | chr7.1:34232304-34232323 | MS.gene78462:CDS | 35.0% | |
| TGAGATCTTCCTATACTCAA+CGG | + | chr7.1:34234002-34234021 | MS.gene78462:intron | 35.0% | |
| TGCCCATGTTAAAGATACAA+GGG | + | chr7.1:34233723-34233742 | MS.gene78462:intron | 35.0% | |
| TGTTTCGTGTTAATTGCAAC+CGG | - | chr7.1:34235105-34235124 | None:intergenic | 35.0% | |
| TTGCCCATGTTAAAGATACA+AGG | + | chr7.1:34233722-34233741 | MS.gene78462:intron | 35.0% | |
| ! | AACTATTTTCTTCTGCAGGA+AGG | + | chr7.1:34234517-34234536 | MS.gene78462:intron | 35.0% |
| ! | ACACCTTTTTGACCTTTTCT+TGG | - | chr7.1:34234799-34234818 | None:intergenic | 35.0% |
| ! | ACTATTTTCTTCTGCAGGAA+GGG | + | chr7.1:34234518-34234537 | MS.gene78462:intron | 35.0% |
| ! | CAGTCTAATTTGCCTGATTT+GGG | + | chr7.1:34232257-34232276 | MS.gene78462:CDS | 35.0% |
| ! | TCAGTCTAATTTGCCTGATT+TGG | + | chr7.1:34232256-34232275 | MS.gene78462:CDS | 35.0% |
| ! | TTTCTGGTAAGGGAATGTTT+AGG | - | chr7.1:34234708-34234727 | None:intergenic | 35.0% |
| ! | TTTTCGCTGAATTAACCGAT+AGG | + | chr7.1:34235073-34235092 | MS.gene78462:CDS | 35.0% |
| !! | AGAAGTTTAGTTCTTGGTAG+TGG | - | chr7.1:34234571-34234590 | None:intergenic | 35.0% |
| !! | CAAGCTTTTTCCTTCTTAGA+TGG | - | chr7.1:34235384-34235403 | None:intergenic | 35.0% |
| !! | GACTATGACATGTTTGCTAT+TGG | + | chr7.1:34233331-34233350 | MS.gene78462:intron | 35.0% |
| !! | GGACTTAGAAGTTTAGTTCT+TGG | - | chr7.1:34234577-34234596 | None:intergenic | 35.0% |
| !! | GTAAACATTAAGTTGGGACA+TGG | - | chr7.1:34234035-34234054 | None:intergenic | 35.0% |
| !! | TAGGTGGATTGAGTCATAAT+TGG | - | chr7.1:34233227-34233246 | None:intergenic | 35.0% |
| !!! | CCAAGCAATTTTTTCTGGTA+AGG | - | chr7.1:34234719-34234738 | None:intergenic | 35.0% |
| AAAGAGCTTACAGTTAGTGG+AGG | + | chr7.1:34235234-34235253 | MS.gene78462:CDS | 40.0% | |
| AGTGGCACTTTCAAGAGAAA+GGG | + | chr7.1:34234945-34234964 | MS.gene78462:CDS | 40.0% | |
| ATCTTCCTATACTCAACGGA+GGG | + | chr7.1:34234006-34234025 | MS.gene78462:intron | 40.0% | |
| CCACTAACTGTAAGCTCTTT+AGG | - | chr7.1:34235234-34235253 | None:intergenic | 40.0% | |
| CCTAAAGAGCTTACAGTTAG+TGG | + | chr7.1:34235231-34235250 | MS.gene78462:CDS | 40.0% | |
| CTATTTGCCACAATTCAAGG+AGG | - | chr7.1:34232791-34232810 | None:intergenic | 40.0% | |
| GATAAGTATGCTATGCTTGC+TGG | + | chr7.1:34235342-34235361 | MS.gene78462:CDS | 40.0% | |
| GATTCCTCTTAGGAAACTAC+CGG | - | chr7.1:34231853-34231872 | None:intergenic | 40.0% | |
| GCACCAAGAAAAGGTCAAAA+AGG | + | chr7.1:34234793-34234812 | MS.gene78462:CDS | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | - | chr7.1:34232794-34232813 | None:intergenic | 40.0% | |
| GGCAAATAGTGCATTGTGAT+TGG | + | chr7.1:34232802-34232821 | MS.gene78462:intron | 40.0% | |
| GGGCAACAAAATACAAGGAT+TGG | - | chr7.1:34233708-34233727 | None:intergenic | 40.0% | |
| GTAAGAGGATGATTCCTCTT+AGG | - | chr7.1:34231863-34231882 | None:intergenic | 40.0% | |
| GTAGCCATAAGCATGTAGTA+AGG | - | chr7.1:34231825-34231844 | None:intergenic | 40.0% | |
| TCATTCCTATGGCTACCAAT+TGG | + | chr7.1:34234655-34234674 | MS.gene78462:intron | 40.0% | |
| TGAACTTGAGGTGACCAAAT+CGG | + | chr7.1:34232157-34232176 | MS.gene78462:CDS | 40.0% | |
| TGTGGCTGAAAAATAGGAAG+TGG | - | chr7.1:34232768-34232787 | None:intergenic | 40.0% | |
| TTGATCTTCATAACCTTCGC+AGG | + | chr7.1:34231945-34231964 | MS.gene78462:CDS | 40.0% | |
| ! | TTATGCCAATTGGTAGCCAT+AGG | - | chr7.1:34234663-34234682 | None:intergenic | 40.0% |
| !! | AATTTGCCTGATTTGGGACT+GGG | + | chr7.1:34232263-34232282 | MS.gene78462:CDS | 40.0% |
| !! | CGATGGTTTCTGAGACAAAA+AGG | - | chr7.1:34231914-34231933 | None:intergenic | 40.0% |
| !! | GAAAGTGCCACTGCTTTAAT+TGG | - | chr7.1:34234937-34234956 | None:intergenic | 40.0% |
| !! | GAATTTGTTGGGAGGTGATA+AGG | + | chr7.1:34232124-34232143 | MS.gene78462:CDS | 40.0% |
| !! | TAATTTGCCTGATTTGGGAC+TGG | + | chr7.1:34232262-34232281 | MS.gene78462:CDS | 40.0% |
| !! | TTTTGACCTTTTCTTGGTGC+TGG | - | chr7.1:34234793-34234812 | None:intergenic | 40.0% |
| !!! | GATCAACATTTTGATGGCGA+TGG | - | chr7.1:34231931-34231950 | None:intergenic | 40.0% |
| AATGCAACTGCTGTAACCAC+AGG | - | chr7.1:34234856-34234875 | None:intergenic | 45.0% | |
| ACCGTTGCATCTGACTTAGA+TGG | + | chr7.1:34231771-34231790 | MS.gene78462:CDS | 45.0% | |
| ACGTCCTCAGCGTAGAATTT+CGG | - | chr7.1:34232014-34232033 | None:intergenic | 45.0% | |
| AGGTCTGAAGATCAATGACG+TGG | + | chr7.1:34231965-34231984 | MS.gene78462:CDS | 45.0% | |
| AGTGGAAGAGAGGCTCATTA+TGG | - | chr7.1:34233357-34233376 | None:intergenic | 45.0% | |
| ATGACGTGGAGATGGTTTCA+AGG | + | chr7.1:34231979-34231998 | MS.gene78462:CDS | 45.0% | |
| ATGCAACTGCTGTAACCACA+GGG | - | chr7.1:34234855-34234874 | None:intergenic | 45.0% | |
| ATTGATCTTCAGACCTGCGA+AGG | - | chr7.1:34231961-34231980 | None:intergenic | 45.0% | |
| CAGTGGCACTTTCAAGAGAA+AGG | + | chr7.1:34234944-34234963 | MS.gene78462:CDS | 45.0% | |
| CTAAGTCAGATGCAACGGTT+TGG | - | chr7.1:34231770-34231789 | None:intergenic | 45.0% | |
| GAACTTGAGGTGACCAAATC+GGG | + | chr7.1:34232158-34232177 | MS.gene78462:CDS | 45.0% | |
| GAAGATCAATGACGTGGAGA+TGG | + | chr7.1:34231971-34231990 | MS.gene78462:CDS | 45.0% | |
| GATCTTCCTATACTCAACGG+AGG | + | chr7.1:34234005-34234024 | MS.gene78462:intron | 45.0% | |
| GCCATCTAAGTCAGATGCAA+CGG | - | chr7.1:34231775-34231794 | None:intergenic | 45.0% | |
| GCGCTGAATCGTAGAAGAAA+TGG | - | chr7.1:34235051-34235070 | None:intergenic | 45.0% | |
| GTGATCTCATAAGTAGGCAC+TGG | - | chr7.1:34235195-34235214 | None:intergenic | 45.0% | |
| GTGGTTACAGCAGTTGCATT+AGG | + | chr7.1:34234856-34234875 | MS.gene78462:CDS | 45.0% | |
| TGCAACCGGAACAATCCTAT+CGG | - | chr7.1:34235091-34235110 | None:intergenic | 45.0% | |
| TGGGAGGTGATAAGGTGATT+GGG | + | chr7.1:34232132-34232151 | MS.gene78462:CDS | 45.0% | |
| TGGTAGGGTTCCATCTAAGA+AGG | + | chr7.1:34235371-34235390 | MS.gene78462:CDS | 45.0% | |
| TTCCTTCCGGACAAATCACT+AGG | - | chr7.1:34235014-34235033 | None:intergenic | 45.0% | |
| TTGAACACATTCCACGTCTC+AGG | - | chr7.1:34232041-34232060 | None:intergenic | 45.0% | |
| TTGGGAGGTGATAAGGTGAT+TGG | + | chr7.1:34232131-34232150 | MS.gene78462:CDS | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | - | chr7.1:34232774-34232793 | None:intergenic | 45.0% |
| ! | AGGTGACCTAGTGATTTGTC+CGG | + | chr7.1:34235005-34235024 | MS.gene78462:CDS | 45.0% |
| ! | CAGGGTCTAAAATTGTGCGA+TGG | - | chr7.1:34234837-34234856 | None:intergenic | 45.0% |
| ! | TCGCACAATTTTAGACCCTG+TGG | + | chr7.1:34234837-34234856 | MS.gene78462:CDS | 45.0% |
| ! | TCTTCTGCAGGAAGGGTATA+TGG | + | chr7.1:34234525-34234544 | MS.gene78462:intron | 45.0% |
| ! | TTTTATGGTACAACGGTCCG+CGG | + | chr7.1:34235132-34235151 | MS.gene78462:CDS | 45.0% |
| !! | AAGGGCAACTGGGTTTGTTA+AGG | + | chr7.1:34232181-34232200 | MS.gene78462:CDS | 45.0% |
| !! | TCTTAGGAAACTACCGGCTT+CGG | - | chr7.1:34231847-34231866 | None:intergenic | 45.0% |
| !! | TGGAAAGCGTTACGTTGTCA+CGG | + | chr7.1:34232067-34232086 | MS.gene78462:CDS | 45.0% |
| !! | AACATTATAAATTTAATTAA+GGG | + | chr7.1:34234253-34234272 | MS.gene78462:intron | 5.0% |
| !!! | AAATTTAATTTCTAAATTTA+GGG | + | chr7.1:34233631-34233650 | MS.gene78462:intron | 5.0% |
| AAGGAGCCTGGTGTTCTTGT+TGG | + | chr7.1:34232200-34232219 | MS.gene78462:CDS | 50.0% | |
| AATGGCTCCACCATCAACCT+TGG | - | chr7.1:34232098-34232117 | None:intergenic | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | + | chr7.1:34232781-34232800 | MS.gene78462:intron | 50.0% | |
| AGGAGCCTGGTGTTCTTGTT+GGG | + | chr7.1:34232201-34232220 | MS.gene78462:CDS | 50.0% | |
| AGGGTTCTTGCTGGAACACT+TGG | + | chr7.1:34235291-34235310 | MS.gene78462:CDS | 50.0% | |
| ATGCTTATGGCTACCGAAGC+CGG | + | chr7.1:34231831-34231850 | MS.gene78462:CDS | 50.0% | |
| CGTTGTACAGTTGTGGACCA+TGG | + | chr7.1:34233089-34233108 | MS.gene78462:intron | 50.0% | |
| CTATCTCCCAGTCCCAAATC+AGG | - | chr7.1:34232272-34232291 | None:intergenic | 50.0% | |
| GAAGCCGGTAGTTTCCTAAG+AGG | + | chr7.1:34231846-34231865 | MS.gene78462:CDS | 50.0% | |
| GGATTCCCTCCGTTGAGTAT+AGG | - | chr7.1:34234014-34234033 | None:intergenic | 50.0% | |
| GGTCCAATACTTTGTGTCCG+CGG | - | chr7.1:34235152-34235171 | None:intergenic | 50.0% | |
| GGTGATTGGGACTGAACTTG+AGG | + | chr7.1:34232145-34232164 | MS.gene78462:CDS | 50.0% | |
| GTATGGATGGACCACATGCA+TGG | - | chr7.1:34233460-34233479 | None:intergenic | 50.0% | |
| GTTGCCGAAATTCTACGCTG+AGG | + | chr7.1:34232007-34232026 | MS.gene78462:CDS | 50.0% | |
| TCCCTACAAGTCGTTCCTTC+CGG | - | chr7.1:34235027-34235046 | None:intergenic | 50.0% | |
| TCCGGAAGGAACGACTTGTA+GGG | + | chr7.1:34235023-34235042 | MS.gene78462:CDS | 50.0% | |
| TGAGGTGACCAAATCGGGAA+GGG | + | chr7.1:34232163-34232182 | MS.gene78462:CDS | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | - | chr7.1:34232786-34232805 | None:intergenic | 50.0% | |
| TTGAGGTGACCAAATCGGGA+AGG | + | chr7.1:34232162-34232181 | MS.gene78462:CDS | 50.0% | |
| ! | GACCTAGTGATTTGTCCGGA+AGG | + | chr7.1:34235009-34235028 | MS.gene78462:CDS | 50.0% |
| ! | GCTATGCTTGCTGGTACAGA+TGG | + | chr7.1:34235351-34235370 | MS.gene78462:CDS | 50.0% |
| ! | GCTTGCTGGTACAGATGGTA+GGG | + | chr7.1:34235356-34235375 | MS.gene78462:CDS | 50.0% |
| ! | TGCTTGCTGGTACAGATGGT+AGG | + | chr7.1:34235355-34235374 | MS.gene78462:CDS | 50.0% |
| !! | ACTGGGTTTGTTAAGGAGCC+TGG | + | chr7.1:34232188-34232207 | MS.gene78462:CDS | 50.0% |
| !!! | CTTTTCTTGGTGCTGGTGGA+GGG | - | chr7.1:34234786-34234805 | None:intergenic | 50.0% |
| !!! | TGACCTTTTCTTGGTGCTGG+TGG | - | chr7.1:34234790-34234809 | None:intergenic | 50.0% |
| !!! | TTTTCTTGGTGCTGGTGGAG+GGG | - | chr7.1:34234785-34234804 | None:intergenic | 50.0% |
| ACCAAATCGGGAAGGGCAAC+TGG | + | chr7.1:34232170-34232189 | MS.gene78462:CDS | 55.0% | |
| AGCTCCCCAACAAGAACACC+AGG | - | chr7.1:34232209-34232228 | None:intergenic | 55.0% | |
| CCAAATCGGGAAGGGCAACT+GGG | + | chr7.1:34232171-34232190 | MS.gene78462:CDS | 55.0% | |
| CCTCCACCAGCACCAAGAAA+AGG | + | chr7.1:34234784-34234803 | MS.gene78462:CDS | 55.0% | |
| GGAGCCTGGTGTTCTTGTTG+GGG | + | chr7.1:34232202-34232221 | MS.gene78462:CDS | 55.0% | |
| GGTCCGCGGACACAAAGTAT+TGG | + | chr7.1:34235146-34235165 | MS.gene78462:CDS | 55.0% | |
| GTCCGGAAGGAACGACTTGT+AGG | + | chr7.1:34235022-34235041 | MS.gene78462:CDS | 55.0% | |
| TGAAAGGGACGGGGAGTAAG+AGG | - | chr7.1:34231878-34231897 | None:intergenic | 55.0% | |
| TGGATGGACCACATGCATGG+TGG | - | chr7.1:34233457-34233476 | None:intergenic | 55.0% | |
| ! | ACGTTGTCACGGCTAGTCCA+AGG | + | chr7.1:34232078-34232097 | MS.gene78462:CDS | 55.0% |
| ! | CACGGCTAGTCCAAGGTTGA+TGG | + | chr7.1:34232085-34232104 | MS.gene78462:CDS | 55.0% |
| !! | GGCTAGTCCAAGGTTGATGG+TGG | + | chr7.1:34232088-34232107 | MS.gene78462:CDS | 55.0% |
| !!! | CCTTTTCTTGGTGCTGGTGG+AGG | - | chr7.1:34234787-34234806 | None:intergenic | 55.0% |
| CCCAGTTGCCCTTCCCGATT+TGG | - | chr7.1:34232174-34232193 | None:intergenic | 60.0% | |
| AGGACGTGCGTCCTGAGACG+TGG | + | chr7.1:34232027-34232046 | MS.gene78462:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 34231699 | 34235404 | 34231699 | ID=MS.gene78462 |
| chr7.1 | mRNA | 34231699 | 34235404 | 34231699 | ID=MS.gene78462.t1;Parent=MS.gene78462 |
| chr7.1 | exon | 34231699 | 34232325 | 34231699 | ID=MS.gene78462.t1.exon1;Parent=MS.gene78462.t1 |
| chr7.1 | CDS | 34231699 | 34232325 | 34231699 | ID=cds.MS.gene78462.t1;Parent=MS.gene78462.t1 |
| chr7.1 | exon | 34234535 | 34234592 | 34234535 | ID=MS.gene78462.t1.exon2;Parent=MS.gene78462.t1 |
| chr7.1 | CDS | 34234535 | 34234592 | 34234535 | ID=cds.MS.gene78462.t1;Parent=MS.gene78462.t1 |
| chr7.1 | exon | 34234758 | 34235404 | 34234758 | ID=MS.gene78462.t1.exon3;Parent=MS.gene78462.t1 |
| chr7.1 | CDS | 34234758 | 34235404 | 34234758 | ID=cds.MS.gene78462.t1;Parent=MS.gene78462.t1 |
| Gene Sequence |
| Protein sequence |
