Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84568.t1 | XP_013449039.1 | 95.8 | 569 | 10 | 1 | 4 | 558 | 3 | 571 | 0.00E+00 | 1132.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84568.t1 | Q9LFD1 | 53.9 | 560 | 236 | 8 | 14 | 558 | 16 | 568 | 6.7e-176 | 618.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84568.t1 | A0A072U0V9 | 95.8 | 569 | 10 | 1 | 4 | 558 | 3 | 571 | 0.0e+00 | 1132.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049147 | MS.gene84568 | 0.810164 | 1.32E-50 | -1.69E-46 |
MS.gene049611 | MS.gene84568 | 0.820837 | 5.55E-53 | -1.69E-46 |
MS.gene049634 | MS.gene84568 | 0.837348 | 5.48E-57 | -1.69E-46 |
MS.gene050095 | MS.gene84568 | 0.802901 | 4.50E-49 | -1.69E-46 |
MS.gene050216 | MS.gene84568 | -0.8008 | 1.22E-48 | -1.69E-46 |
MS.gene050380 | MS.gene84568 | 0.869994 | 2.04E-66 | -1.69E-46 |
MS.gene050381 | MS.gene84568 | 0.872746 | 2.51E-67 | -1.69E-46 |
MS.gene050809 | MS.gene84568 | 0.815069 | 1.12E-51 | -1.69E-46 |
MS.gene05104 | MS.gene84568 | 0.822399 | 2.42E-53 | -1.69E-46 |
MS.gene051127 | MS.gene84568 | 0.824536 | 7.66E-54 | -1.69E-46 |
MS.gene051385 | MS.gene84568 | 0.814753 | 1.31E-51 | -1.69E-46 |
MS.gene051632 | MS.gene84568 | 0.815003 | 1.15E-51 | -1.69E-46 |
MS.gene051946 | MS.gene84568 | 0.800612 | 1.33E-48 | -1.69E-46 |
MS.gene053406 | MS.gene84568 | 0.831082 | 2.04E-55 | -1.69E-46 |
MS.gene053420 | MS.gene84568 | 0.820779 | 5.73E-53 | -1.69E-46 |
MS.gene053488 | MS.gene84568 | 0.825462 | 4.63E-54 | -1.69E-46 |
MS.gene053561 | MS.gene84568 | 0.8331 | 6.48E-56 | -1.69E-46 |
MS.gene054290 | MS.gene84568 | 0.810694 | 1.01E-50 | -1.69E-46 |
MS.gene054708 | MS.gene84568 | 0.817878 | 2.62E-52 | -1.69E-46 |
MS.gene054742 | MS.gene84568 | 0.800314 | 1.53E-48 | -1.69E-46 |
MS.gene055124 | MS.gene84568 | 0.905955 | 2.48E-80 | -1.69E-46 |
MS.gene055154 | MS.gene84568 | 0.847951 | 8.36E-60 | -1.69E-46 |
MS.gene055202 | MS.gene84568 | 0.837293 | 5.66E-57 | -1.69E-46 |
MS.gene055959 | MS.gene84568 | 0.830433 | 2.94E-55 | -1.69E-46 |
MS.gene056313 | MS.gene84568 | 0.847637 | 1.02E-59 | -1.69E-46 |
MS.gene056942 | MS.gene84568 | -0.810928 | 9.03E-51 | -1.69E-46 |
MS.gene058093 | MS.gene84568 | 0.855871 | 4.72E-62 | -1.69E-46 |
MS.gene058099 | MS.gene84568 | 0.826395 | 2.78E-54 | -1.69E-46 |
MS.gene058108 | MS.gene84568 | 0.857841 | 1.24E-62 | -1.69E-46 |
MS.gene058109 | MS.gene84568 | 0.829441 | 5.14E-55 | -1.69E-46 |
MS.gene058170 | MS.gene84568 | 0.801604 | 8.32E-49 | -1.69E-46 |
MS.gene058171 | MS.gene84568 | 0.868583 | 5.86E-66 | -1.69E-46 |
MS.gene058173 | MS.gene84568 | 0.862363 | 5.34E-64 | -1.69E-46 |
MS.gene058174 | MS.gene84568 | 0.806228 | 9.11E-50 | -1.69E-46 |
MS.gene058175 | MS.gene84568 | 0.868819 | 4.92E-66 | -1.69E-46 |
MS.gene058176 | MS.gene84568 | 0.855636 | 5.53E-62 | -1.69E-46 |
MS.gene058177 | MS.gene84568 | 0.818152 | 2.28E-52 | -1.69E-46 |
MS.gene058179 | MS.gene84568 | 0.87031 | 1.61E-66 | -1.69E-46 |
MS.gene058180 | MS.gene84568 | 0.861866 | 7.59E-64 | -1.69E-46 |
MS.gene058840 | MS.gene84568 | 0.877473 | 6.11E-69 | -1.69E-46 |
MS.gene059037 | MS.gene84568 | 0.866848 | 2.11E-65 | -1.69E-46 |
MS.gene059038 | MS.gene84568 | 0.829177 | 5.95E-55 | -1.69E-46 |
MS.gene059044 | MS.gene84568 | 0.848941 | 4.45E-60 | -1.69E-46 |
MS.gene059045 | MS.gene84568 | 0.837436 | 5.21E-57 | -1.69E-46 |
MS.gene059223 | MS.gene84568 | 0.805991 | 1.02E-49 | -1.69E-46 |
MS.gene059367 | MS.gene84568 | -0.813827 | 2.10E-51 | -1.69E-46 |
MS.gene059690 | MS.gene84568 | 0.808412 | 3.14E-50 | -1.69E-46 |
MS.gene059691 | MS.gene84568 | 0.819431 | 1.17E-52 | -1.69E-46 |
MS.gene059694 | MS.gene84568 | 0.828434 | 9.01E-55 | -1.69E-46 |
MS.gene059697 | MS.gene84568 | 0.830668 | 2.58E-55 | -1.69E-46 |
MS.gene059944 | MS.gene84568 | 0.821627 | 3.65E-53 | -1.69E-46 |
MS.gene060205 | MS.gene84568 | 0.818432 | 1.97E-52 | -1.69E-46 |
MS.gene060482 | MS.gene84568 | -0.810512 | 1.11E-50 | -1.69E-46 |
MS.gene060578 | MS.gene84568 | 0.810447 | 1.15E-50 | -1.69E-46 |
MS.gene06074 | MS.gene84568 | 0.828579 | 8.31E-55 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84568.t1 | MTR_7g065980 | 95.782 | 569 | 10 | 1 | 4 | 558 | 3 | 571 | 0.0 | 1121 |
MS.gene84568.t1 | MTR_7g065970 | 62.218 | 577 | 192 | 6 | 1 | 558 | 1 | 570 | 0.0 | 697 |
MS.gene84568.t1 | MTR_4g019225 | 54.912 | 570 | 229 | 10 | 10 | 558 | 10 | 572 | 0.0 | 627 |
MS.gene84568.t1 | MTR_5g073210 | 44.599 | 574 | 281 | 9 | 5 | 558 | 4 | 560 | 5.99e-175 | 506 |
MS.gene84568.t1 | MTR_5g083360 | 44.561 | 570 | 277 | 10 | 14 | 558 | 12 | 567 | 9.81e-175 | 506 |
MS.gene84568.t1 | MTR_7g062250 | 44.894 | 568 | 281 | 10 | 13 | 558 | 21 | 578 | 1.23e-168 | 491 |
MS.gene84568.t1 | MTR_5g020620 | 45.293 | 563 | 273 | 13 | 12 | 558 | 18 | 561 | 2.77e-166 | 484 |
MS.gene84568.t1 | MTR_7g058690 | 43.761 | 585 | 288 | 12 | 6 | 558 | 5 | 580 | 1.13e-164 | 481 |
MS.gene84568.t1 | MTR_5g069680 | 43.728 | 574 | 288 | 10 | 1 | 558 | 4 | 558 | 1.79e-164 | 479 |
MS.gene84568.t1 | MTR_7g060460 | 43.351 | 579 | 291 | 11 | 8 | 558 | 12 | 581 | 4.71e-163 | 476 |
MS.gene84568.t1 | MTR_7g458880 | 43.262 | 564 | 287 | 9 | 19 | 558 | 26 | 580 | 1.29e-162 | 475 |
MS.gene84568.t1 | MTR_2g008330 | 43.627 | 557 | 285 | 8 | 21 | 558 | 33 | 579 | 3.91e-162 | 474 |
MS.gene84568.t1 | MTR_4g015120 | 44.954 | 545 | 269 | 9 | 30 | 558 | 28 | 557 | 2.67e-161 | 471 |
MS.gene84568.t1 | MTR_3g101640 | 46.299 | 581 | 274 | 15 | 2 | 558 | 5 | 571 | 2.39e-160 | 469 |
MS.gene84568.t1 | MTR_3g101635 | 45.863 | 556 | 270 | 10 | 13 | 548 | 12 | 556 | 3.90e-160 | 469 |
MS.gene84568.t1 | MTR_4g064530 | 44.102 | 551 | 279 | 9 | 13 | 544 | 31 | 571 | 5.65e-159 | 466 |
MS.gene84568.t1 | MTR_5g020600 | 43.950 | 562 | 281 | 12 | 14 | 558 | 22 | 566 | 2.57e-158 | 464 |
MS.gene84568.t1 | MTR_3g462760 | 43.670 | 545 | 273 | 11 | 30 | 558 | 30 | 556 | 4.82e-158 | 463 |
MS.gene84568.t1 | MTR_7g062310 | 42.934 | 559 | 287 | 9 | 23 | 558 | 44 | 593 | 5.89e-157 | 461 |
MS.gene84568.t1 | MTR_5g081810 | 45.370 | 540 | 261 | 12 | 35 | 558 | 8 | 529 | 4.68e-155 | 454 |
MS.gene84568.t1 | MTR_3g071890 | 45.627 | 526 | 244 | 13 | 14 | 514 | 18 | 526 | 1.70e-153 | 452 |
MS.gene84568.t1 | MTR_8g027375 | 41.065 | 582 | 304 | 11 | 1 | 558 | 5 | 571 | 2.63e-148 | 438 |
MS.gene84568.t1 | MTR_4g064530 | 43.371 | 528 | 268 | 10 | 13 | 519 | 31 | 548 | 6.19e-146 | 432 |
MS.gene84568.t1 | MTR_8g091390 | 29.764 | 551 | 312 | 16 | 41 | 549 | 49 | 566 | 4.15e-63 | 217 |
MS.gene84568.t1 | MTR_3g078700 | 28.648 | 562 | 331 | 16 | 1 | 536 | 1 | 518 | 3.17e-54 | 192 |
MS.gene84568.t1 | MTR_3g078740 | 28.811 | 597 | 334 | 23 | 1 | 536 | 1 | 567 | 3.87e-53 | 191 |
MS.gene84568.t1 | MTR_5g081790 | 39.194 | 273 | 149 | 7 | 244 | 516 | 165 | 420 | 2.56e-52 | 184 |
MS.gene84568.t1 | MTR_5g081790 | 47.468 | 158 | 74 | 3 | 12 | 160 | 9 | 166 | 3.31e-37 | 143 |
MS.gene84568.t1 | MTR_3g078730 | 26.821 | 563 | 336 | 15 | 1 | 536 | 4 | 517 | 1.45e-46 | 171 |
MS.gene84568.t1 | MTR_1g090707 | 26.072 | 583 | 341 | 19 | 13 | 558 | 7 | 536 | 3.94e-40 | 154 |
MS.gene84568.t1 | MTR_8g479380 | 26.545 | 550 | 319 | 19 | 12 | 531 | 10 | 504 | 1.12e-35 | 140 |
MS.gene84568.t1 | MTR_1g026410 | 28.884 | 502 | 292 | 20 | 40 | 523 | 43 | 497 | 4.57e-35 | 139 |
MS.gene84568.t1 | MTR_3g115050 | 28.713 | 505 | 289 | 21 | 40 | 523 | 44 | 498 | 4.71e-35 | 139 |
MS.gene84568.t1 | MTR_4g049390 | 26.008 | 496 | 304 | 16 | 40 | 518 | 41 | 490 | 1.66e-33 | 134 |
MS.gene84568.t1 | MTR_8g479390 | 25.819 | 519 | 323 | 15 | 29 | 531 | 34 | 506 | 3.84e-33 | 133 |
MS.gene84568.t1 | MTR_4g075690 | 27.218 | 496 | 297 | 19 | 40 | 518 | 44 | 492 | 2.21e-32 | 131 |
MS.gene84568.t1 | MTR_4g101650 | 27.972 | 572 | 350 | 20 | 12 | 558 | 15 | 549 | 4.32e-32 | 130 |
MS.gene84568.t1 | MTR_2g088080 | 25.775 | 516 | 302 | 15 | 29 | 518 | 33 | 493 | 7.78e-31 | 126 |
MS.gene84568.t1 | MTR_4g048350 | 25.806 | 496 | 304 | 19 | 40 | 518 | 41 | 489 | 1.86e-30 | 125 |
MS.gene84568.t1 | MTR_3g008580 | 26.224 | 572 | 360 | 18 | 13 | 558 | 16 | 551 | 1.09e-29 | 124 |
MS.gene84568.t1 | MTR_3g083430 | 26.208 | 538 | 323 | 18 | 29 | 540 | 28 | 517 | 1.87e-29 | 122 |
MS.gene84568.t1 | MTR_4g132320 | 25.984 | 508 | 289 | 19 | 40 | 518 | 45 | 494 | 4.35e-29 | 121 |
MS.gene84568.t1 | MTR_3g083450 | 26.208 | 538 | 323 | 19 | 29 | 540 | 29 | 518 | 6.59e-29 | 121 |
MS.gene84568.t1 | MTR_3g083400 | 26.022 | 538 | 324 | 18 | 29 | 540 | 28 | 517 | 1.59e-28 | 120 |
MS.gene84568.t1 | MTR_8g073840 | 40.223 | 179 | 70 | 5 | 21 | 191 | 25 | 174 | 1.76e-28 | 115 |
MS.gene84568.t1 | MTR_4g083210 | 26.248 | 541 | 338 | 17 | 11 | 531 | 5 | 504 | 2.32e-28 | 119 |
MS.gene84568.t1 | MTR_3g083440 | 25.836 | 538 | 325 | 18 | 29 | 540 | 28 | 517 | 2.55e-28 | 119 |
MS.gene84568.t1 | MTR_4g083190 | 25.953 | 551 | 291 | 21 | 44 | 548 | 45 | 524 | 2.71e-28 | 119 |
MS.gene84568.t1 | MTR_3g083390 | 25.836 | 538 | 325 | 18 | 29 | 540 | 28 | 517 | 8.54e-28 | 117 |
MS.gene84568.t1 | MTR_5g018270 | 25.237 | 527 | 313 | 17 | 29 | 531 | 34 | 503 | 1.33e-27 | 117 |
MS.gene84568.t1 | MTR_3g083410 | 25.577 | 520 | 313 | 18 | 47 | 540 | 10 | 481 | 3.51e-27 | 115 |
MS.gene84568.t1 | MTR_7g051440 | 27.048 | 525 | 321 | 16 | 32 | 532 | 35 | 521 | 5.20e-26 | 112 |
MS.gene84568.t1 | MTR_4g075690 | 26.444 | 450 | 268 | 18 | 40 | 472 | 44 | 447 | 5.15e-24 | 105 |
MS.gene84568.t1 | MTR_2g088080 | 24.625 | 467 | 271 | 15 | 78 | 518 | 1 | 412 | 2.60e-22 | 100 |
MS.gene84568.t1 | MTR_7g058670 | 46.753 | 77 | 39 | 2 | 83 | 157 | 13 | 89 | 6.18e-18 | 79.7 |
MS.gene84568.t1 | MTR_6g055200 | 63.043 | 46 | 16 | 1 | 466 | 511 | 1 | 45 | 4.32e-13 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84568.t1 | AT5G01050 | 53.737 | 562 | 238 | 8 | 12 | 558 | 14 | 568 | 0.0 | 608 |
MS.gene84568.t1 | AT5G01040 | 52.236 | 559 | 249 | 6 | 12 | 558 | 14 | 566 | 0.0 | 602 |
MS.gene84568.t1 | AT3G09220 | 53.188 | 549 | 230 | 9 | 11 | 541 | 11 | 550 | 0.0 | 581 |
MS.gene84568.t1 | AT5G05390 | 44.797 | 567 | 279 | 10 | 12 | 558 | 13 | 565 | 1.23e-171 | 498 |
MS.gene84568.t1 | AT2G40370 | 42.491 | 586 | 298 | 10 | 2 | 558 | 5 | 580 | 2.82e-171 | 498 |
MS.gene84568.t1 | AT2G30210 | 44.718 | 568 | 270 | 12 | 18 | 558 | 20 | 570 | 1.39e-170 | 495 |
MS.gene84568.t1 | AT5G07130 | 43.793 | 580 | 284 | 12 | 8 | 558 | 3 | 569 | 5.52e-167 | 486 |
MS.gene84568.t1 | AT2G29130 | 43.966 | 580 | 286 | 12 | 9 | 558 | 3 | 573 | 8.53e-167 | 486 |
MS.gene84568.t1 | AT3G09220 | 53.362 | 461 | 188 | 9 | 99 | 541 | 2 | 453 | 7.20e-165 | 477 |
MS.gene84568.t1 | AT5G60020 | 42.930 | 587 | 296 | 12 | 1 | 558 | 1 | 577 | 2.08e-161 | 472 |
MS.gene84568.t1 | AT5G03260 | 45.848 | 554 | 265 | 14 | 22 | 558 | 22 | 557 | 2.68e-161 | 471 |
MS.gene84568.t1 | AT5G60020 | 44.304 | 553 | 270 | 11 | 35 | 558 | 2 | 545 | 2.03e-160 | 469 |
MS.gene84568.t1 | AT2G38080 | 43.058 | 569 | 287 | 13 | 10 | 558 | 7 | 558 | 1.26e-159 | 467 |
MS.gene84568.t1 | AT5G58910 | 44.320 | 537 | 272 | 9 | 38 | 558 | 41 | 566 | 2.58e-159 | 466 |
MS.gene84568.t1 | AT5G58910 | 44.037 | 545 | 278 | 9 | 30 | 558 | 34 | 567 | 3.21e-159 | 466 |
MS.gene84568.t1 | AT5G09360 | 42.049 | 566 | 292 | 10 | 12 | 558 | 21 | 569 | 6.33e-158 | 463 |
MS.gene84568.t1 | AT1G18140 | 44.077 | 574 | 270 | 13 | 21 | 558 | 23 | 581 | 2.18e-156 | 459 |
MS.gene84568.t1 | AT5G01190 | 43.902 | 574 | 286 | 9 | 1 | 558 | 5 | 558 | 3.87e-156 | 458 |
MS.gene84568.t1 | AT5G58910 | 43.762 | 537 | 268 | 10 | 38 | 558 | 5 | 523 | 4.15e-154 | 452 |
MS.gene84568.t1 | AT2G46570 | 43.165 | 556 | 283 | 10 | 22 | 558 | 28 | 569 | 3.24e-149 | 441 |
MS.gene84568.t1 | AT5G01190 | 44.802 | 529 | 261 | 8 | 46 | 558 | 31 | 544 | 6.56e-149 | 439 |
MS.gene84568.t1 | AT5G48100 | 43.094 | 543 | 272 | 13 | 29 | 548 | 25 | 553 | 1.72e-142 | 423 |
MS.gene84568.t1 | AT5G60020 | 41.835 | 545 | 278 | 12 | 1 | 516 | 1 | 535 | 2.16e-140 | 417 |
MS.gene84568.t1 | AT5G07130 | 43.863 | 497 | 240 | 11 | 88 | 558 | 1 | 484 | 3.62e-139 | 412 |
MS.gene84568.t1 | AT5G07130 | 43.863 | 497 | 240 | 11 | 88 | 558 | 1 | 484 | 3.62e-139 | 412 |
MS.gene84568.t1 | AT2G46570 | 42.828 | 495 | 250 | 10 | 83 | 558 | 4 | 484 | 2.30e-127 | 382 |
MS.gene84568.t1 | AT4G39830 | 28.668 | 593 | 338 | 20 | 13 | 558 | 23 | 577 | 3.42e-63 | 218 |
MS.gene84568.t1 | AT5G21100 | 29.032 | 558 | 321 | 18 | 21 | 537 | 19 | 542 | 4.60e-61 | 211 |
MS.gene84568.t1 | AT5G21105 | 29.932 | 588 | 331 | 21 | 10 | 549 | 20 | 574 | 6.08e-61 | 211 |
MS.gene84568.t1 | AT5G21105 | 29.529 | 552 | 311 | 20 | 10 | 516 | 20 | 538 | 1.54e-52 | 188 |
MS.gene84568.t1 | AT4G39830 | 28.654 | 520 | 287 | 19 | 85 | 558 | 1 | 482 | 1.77e-47 | 173 |
MS.gene84568.t1 | AT4G39830 | 28.655 | 513 | 282 | 19 | 92 | 558 | 6 | 480 | 5.15e-46 | 169 |
MS.gene84568.t1 | AT4G39830 | 28.131 | 519 | 278 | 18 | 85 | 558 | 1 | 469 | 1.53e-44 | 164 |
MS.gene84568.t1 | AT1G41830 | 27.925 | 530 | 311 | 19 | 16 | 523 | 16 | 496 | 1.35e-36 | 143 |
MS.gene84568.t1 | AT1G76160 | 26.560 | 561 | 342 | 18 | 9 | 548 | 6 | 517 | 9.18e-36 | 141 |
MS.gene84568.t1 | AT4G37160 | 27.057 | 547 | 336 | 16 | 29 | 558 | 34 | 534 | 2.22e-35 | 140 |
MS.gene84568.t1 | AT5G66920 | 26.134 | 551 | 334 | 17 | 29 | 558 | 40 | 538 | 1.12e-34 | 138 |
MS.gene84568.t1 | AT5G21105 | 30.769 | 364 | 212 | 12 | 195 | 549 | 51 | 383 | 7.85e-34 | 133 |
MS.gene84568.t1 | AT2G23630 | 26.740 | 546 | 338 | 18 | 29 | 558 | 33 | 532 | 1.05e-33 | 135 |
MS.gene84568.t1 | AT5G51480 | 26.460 | 582 | 344 | 18 | 14 | 558 | 16 | 550 | 1.09e-33 | 135 |
MS.gene84568.t1 | AT2G23630 | 26.740 | 546 | 338 | 18 | 29 | 558 | 38 | 537 | 1.14e-33 | 135 |
MS.gene84568.t1 | AT5G48450 | 26.459 | 514 | 314 | 18 | 40 | 532 | 43 | 513 | 1.62e-33 | 135 |
MS.gene84568.t1 | AT1G21850 | 27.574 | 544 | 296 | 20 | 37 | 548 | 40 | 517 | 1.66e-33 | 134 |
MS.gene84568.t1 | AT5G48450 | 26.459 | 514 | 314 | 18 | 40 | 532 | 43 | 513 | 3.25e-33 | 134 |
MS.gene84568.t1 | AT1G21860 | 26.204 | 519 | 304 | 21 | 37 | 531 | 40 | 503 | 9.99e-33 | 132 |
MS.gene84568.t1 | AT1G75790 | 26.633 | 597 | 332 | 25 | 1 | 558 | 12 | 541 | 1.97e-32 | 131 |
MS.gene84568.t1 | AT4G22010 | 26.032 | 557 | 330 | 18 | 29 | 558 | 29 | 530 | 5.74e-32 | 130 |
MS.gene84568.t1 | AT4G12420 | 26.217 | 534 | 338 | 17 | 30 | 540 | 29 | 529 | 1.65e-31 | 129 |
MS.gene84568.t1 | AT4G12420 | 26.217 | 534 | 338 | 17 | 30 | 540 | 29 | 529 | 1.65e-31 | 129 |
MS.gene84568.t1 | AT4G25240 | 26.817 | 578 | 352 | 18 | 11 | 558 | 14 | 550 | 3.12e-31 | 128 |
MS.gene84568.t1 | AT4G25240 | 26.817 | 578 | 352 | 18 | 11 | 558 | 14 | 550 | 3.12e-31 | 128 |
MS.gene84568.t1 | AT1G55570 | 27.470 | 506 | 284 | 17 | 44 | 518 | 47 | 500 | 8.38e-30 | 124 |
MS.gene84568.t1 | AT4G28090 | 25.251 | 499 | 303 | 19 | 47 | 523 | 49 | 499 | 2.09e-28 | 119 |
MS.gene84568.t1 | AT4G37160 | 27.790 | 439 | 258 | 14 | 29 | 450 | 34 | 430 | 4.80e-27 | 114 |
MS.gene84568.t1 | AT3G13390 | 25.285 | 526 | 312 | 16 | 36 | 531 | 38 | 512 | 8.83e-27 | 114 |
MS.gene84568.t1 | AT4G38420 | 24.950 | 497 | 314 | 16 | 44 | 522 | 48 | 503 | 4.41e-26 | 112 |
MS.gene84568.t1 | AT3G13400 | 26.358 | 497 | 300 | 17 | 44 | 518 | 45 | 497 | 8.92e-25 | 108 |
MS.gene84568.t1 | AT3G13400 | 26.358 | 497 | 300 | 17 | 44 | 518 | 45 | 497 | 8.92e-25 | 108 |
MS.gene84568.t1 | AT1G55560 | 25.100 | 498 | 305 | 18 | 44 | 518 | 44 | 496 | 1.45e-22 | 102 |
MS.gene84568.t1 | AT4G38420 | 24.587 | 484 | 306 | 16 | 37 | 502 | 41 | 483 | 2.18e-22 | 100 |
MS.gene84568.t1 | AT4G38420 | 28.295 | 258 | 159 | 6 | 37 | 277 | 41 | 289 | 3.48e-20 | 94.0 |
Find 117 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACCTCAATATGAAGATTT+TGG | 0.185047 | 7.3:-40180436 | None:intergenic |
CAAGTGATTGTTACAGTTAA+TGG | 0.188106 | 7.3:-40179719 | MS.gene84568:CDS |
TACAGTTGAACGCACTTTCT+TGG | 0.249775 | 7.3:-40180355 | MS.gene84568:intron |
CCTGTACATTTAGCATTTAC+AGG | 0.258852 | 7.3:+40178089 | None:intergenic |
CGATAAACTCAAGTATAATT+TGG | 0.260597 | 7.3:-40177712 | MS.gene84568:CDS |
GGACATTGTGTTATATATTC+TGG | 0.264970 | 7.3:+40179012 | None:intergenic |
ACAGCATTCATAGTTGAAAA+TGG | 0.311293 | 7.3:-40177426 | MS.gene84568:CDS |
GACGATTATATCGGTGGTAT+AGG | 0.322464 | 7.3:+40178448 | None:intergenic |
TTCACTATCAACGGCTTTCC+TGG | 0.323167 | 7.3:-40178733 | MS.gene84568:CDS |
TGCTTCACCTTAGTCGATTT+CGG | 0.324244 | 7.3:+40177870 | None:intergenic |
GGTACTTCCTTGTAGGGTTT+AGG | 0.325375 | 7.3:+40178844 | None:intergenic |
TATTATTGGTACTTCCTTGT+AGG | 0.335846 | 7.3:+40178837 | None:intergenic |
AGTGGGACAGGGACCCAATT+AGG | 0.336834 | 7.3:+40178164 | None:intergenic |
TTGCTGTGCCGGTGGGAGGA+TGG | 0.341412 | 7.3:-40177665 | MS.gene84568:CDS |
CAAATTATACTTGAGTTTAT+CGG | 0.350950 | 7.3:+40177713 | None:intergenic |
CAGTGAATTGTTATATTGTA+AGG | 0.354013 | 7.3:+40179626 | None:intergenic |
TATATAGCCAATTAACATTT+AGG | 0.357318 | 7.3:+40177360 | None:intergenic |
CTGTAACAATCACTTGTTCA+TGG | 0.365502 | 7.3:+40179726 | None:intergenic |
TGCTGTGCCGGTGGGAGGAT+GGG | 0.368851 | 7.3:-40177664 | MS.gene84568:CDS |
TCCTTGTAGGGTTTAGGAAA+TGG | 0.378132 | 7.3:+40178850 | None:intergenic |
CCATCCCTGACTTCCAGCTT+TGG | 0.378346 | 7.3:+40179683 | None:intergenic |
TTCGGTGTAAATGTAACATT+AGG | 0.379226 | 7.3:+40177888 | None:intergenic |
ATGTGGATGATCATAATCTA+TGG | 0.380123 | 7.3:-40177458 | MS.gene84568:CDS |
ATTATTGGTACTTCCTTGTA+GGG | 0.396984 | 7.3:+40178838 | None:intergenic |
CGAGTGCAGCGTTGACCATT+CGG | 0.404878 | 7.3:+40178543 | None:intergenic |
CAGGTCCAAAGCTGGAAGTC+AGG | 0.405362 | 7.3:-40179688 | MS.gene84568:CDS |
TCGCAACACGGTTGCTGTGC+CGG | 0.420527 | 7.3:-40177676 | MS.gene84568:CDS |
ACGATTATATCGGTGGTATA+GGG | 0.426862 | 7.3:+40178449 | None:intergenic |
CTGACTTCCAGCTTTGGACC+TGG | 0.430307 | 7.3:+40179689 | None:intergenic |
GTTGTACGTGCAACAGTTCA+TGG | 0.431433 | 7.3:-40178907 | MS.gene84568:CDS |
CACAACAAGAAGGAACATTA+TGG | 0.433064 | 7.3:-40178948 | MS.gene84568:CDS |
CTCGGTGTATGCGGCGTCCA+TGG | 0.436546 | 7.3:+40178472 | None:intergenic |
GCAACATAACTGGTCTTGTA+GGG | 0.442902 | 7.3:-40178190 | MS.gene84568:CDS |
GGAACGAGGTTGAATGATAA+TGG | 0.449727 | 7.3:+40178882 | None:intergenic |
AGTCATCCCATGCATCTTCA+TGG | 0.452974 | 7.3:-40177786 | MS.gene84568:CDS |
GCCATGTAGTATGAACCTTT+TGG | 0.463483 | 7.3:+40178380 | None:intergenic |
ACATACCAGGATTGTCAGTT+CGG | 0.465483 | 7.3:+40177628 | None:intergenic |
GCAACCGTGTTGCGAATTGA+AGG | 0.469608 | 7.3:+40177684 | None:intergenic |
CCTGTAAATGCTAAATGTAC+AGG | 0.471155 | 7.3:-40178089 | MS.gene84568:CDS |
TACTTGAGTTTATCGGTAGT+AGG | 0.471637 | 7.3:+40177720 | None:intergenic |
GCTGCATCACCTTATGTTGT+TGG | 0.473113 | 7.3:-40178359 | MS.gene84568:CDS |
CCAACACCTTCAACTTCACT+TGG | 0.476302 | 7.3:-40177402 | MS.gene84568:CDS |
GTTGACCATTCGGAACAAAT+AGG | 0.478262 | 7.3:+40178553 | None:intergenic |
AAAGACGACGGCACGAGTTG+TGG | 0.481369 | 7.3:+40178310 | None:intergenic |
TGACTTCCAGCTTTGGACCT+GGG | 0.483976 | 7.3:+40179690 | None:intergenic |
GTCTGCTGTGAAAAGTATAT+CGG | 0.485158 | 7.3:+40178406 | None:intergenic |
CTGACCATGCACTATATAGC+TGG | 0.487286 | 7.3:+40179040 | None:intergenic |
TGCTGCAATGACGATTATAT+CGG | 0.491384 | 7.3:+40178439 | None:intergenic |
TGGAAAAGGATATTCCATAA+TGG | 0.491498 | 7.3:-40178009 | MS.gene84568:CDS |
ATTTACACCGAAATCGACTA+AGG | 0.491745 | 7.3:-40177877 | MS.gene84568:CDS |
AGCAACATAACTGGTCTTGT+AGG | 0.494287 | 7.3:-40178191 | MS.gene84568:CDS |
GATATAATCGTCATTGCAGC+AGG | 0.499394 | 7.3:-40178437 | MS.gene84568:CDS |
TCCATTTCCTAAACCCTACA+AGG | 0.509307 | 7.3:-40178851 | MS.gene84568:CDS |
ACTGGTTCACCAACAACATA+AGG | 0.513560 | 7.3:+40178350 | None:intergenic |
TCATCCACTTCAAGTGGGAC+AGG | 0.515815 | 7.3:+40178152 | None:intergenic |
TGTGGATGATCATAATCTAT+GGG | 0.516377 | 7.3:-40177457 | MS.gene84568:CDS |
TTCACAGCAGACCAACCAAA+AGG | 0.519262 | 7.3:-40178395 | MS.gene84568:CDS |
CATTTAGCATTTACAGGACA+AGG | 0.523265 | 7.3:+40178095 | None:intergenic |
CAACACGGTTGCTGTGCCGG+TGG | 0.525329 | 7.3:-40177673 | MS.gene84568:CDS |
ACTTTACCCAGGTCCAAAGC+TGG | 0.536979 | 7.3:-40179696 | MS.gene84568:CDS |
TTCATACCATGAAGATGCAT+GGG | 0.538306 | 7.3:+40177780 | None:intergenic |
ATTCATACCATGAAGATGCA+TGG | 0.538422 | 7.3:+40177779 | None:intergenic |
TGAAAAGTATATCGGCACTT+TGG | 0.539755 | 7.3:+40178414 | None:intergenic |
ATTATCATTCAACCTCGTTC+CGG | 0.545898 | 7.3:-40178880 | MS.gene84568:CDS |
ACATATAGTACCTTTGATGC+CGG | 0.551649 | 7.3:-40178258 | MS.gene84568:CDS |
CAAATACAATTCAACGGTGG+AGG | 0.551874 | 7.3:-40177844 | MS.gene84568:CDS |
AGTGGTAATGCCGGCATCAA+AGG | 0.554962 | 7.3:+40178248 | None:intergenic |
GAACAATTGAAGAGATCACC+AGG | 0.557756 | 7.3:+40178715 | None:intergenic |
TAACATTTAGGCAAATCAGC+AGG | 0.558427 | 7.3:+40177372 | None:intergenic |
GAATTGTCGAAGAGTCCTAC+TGG | 0.559246 | 7.3:+40178332 | None:intergenic |
AGATTCCGAACTGACAATCC+TGG | 0.559455 | 7.3:-40177633 | MS.gene84568:intron |
TTAGGCAAATCAGCAGGTGG+TGG | 0.560545 | 7.3:+40177378 | None:intergenic |
GGTCCCTGTCCCACTTGAAG+TGG | 0.563821 | 7.3:-40178156 | MS.gene84568:CDS |
AGGTCCAAAGCTGGAAGTCA+GGG | 0.569821 | 7.3:-40179687 | MS.gene84568:CDS |
AACACGGTTGCTGTGCCGGT+GGG | 0.573459 | 7.3:-40177672 | MS.gene84568:CDS |
CTTACAATATAACAATTCAC+TGG | 0.574181 | 7.3:-40179625 | MS.gene84568:intron |
TATATCGGTGGTATAGGGCT+CGG | 0.574475 | 7.3:+40178454 | None:intergenic |
AAAGACCTATTTGTTCCGAA+TGG | 0.575759 | 7.3:-40178558 | MS.gene84568:CDS |
GCTAAATGTACAGGTCCACT+TGG | 0.578008 | 7.3:-40178080 | MS.gene84568:CDS |
TTTAGGAAATGGAAATCGAC+CGG | 0.579716 | 7.3:+40178861 | None:intergenic |
ACCAAAAGGTTCATACTACA+TGG | 0.591334 | 7.3:-40178381 | MS.gene84568:CDS |
TATGTATATCACAATTAACA+TGG | 0.591646 | 7.3:-40178126 | MS.gene84568:CDS |
ACGGTTGCTGTGCCGGTGGG+AGG | 0.595198 | 7.3:-40177669 | MS.gene84568:CDS |
CTATATAGTGCATGGTCAGA+CGG | 0.595622 | 7.3:-40179036 | MS.gene84568:CDS |
CAAATTCACAGTGGTAGCCA+TGG | 0.597951 | 7.3:-40178489 | MS.gene84568:CDS |
TTTAATGTGACACAACAAGA+AGG | 0.597981 | 7.3:-40178958 | MS.gene84568:CDS |
GAATCCTTCAATTCGCAACA+CGG | 0.600436 | 7.3:-40177688 | MS.gene84568:CDS |
ATAGCAGCCCATCCTCCCAC+CGG | 0.601570 | 7.3:+40177657 | None:intergenic |
TTGATAGTGAACGCATCAGA+TGG | 0.603628 | 7.3:+40178745 | None:intergenic |
TTTGGTGTTATGGCAAACAT+GGG | 0.609087 | 7.3:-40180418 | MS.gene84568:CDS |
CATCCACTTCAAGTGGGACA+GGG | 0.612302 | 7.3:+40178153 | None:intergenic |
GCAATTCAAATACAATTCAA+CGG | 0.613563 | 7.3:-40177850 | MS.gene84568:CDS |
TTGTTGTGAAGTGGTAATGC+CGG | 0.616115 | 7.3:+40178239 | None:intergenic |
CCAAGTGAAGTTGAAGGTGT+TGG | 0.618280 | 7.3:+40177402 | None:intergenic |
TCTGATGCGTTCACTATCAA+CGG | 0.619571 | 7.3:-40178742 | MS.gene84568:CDS |
TGCAATGACGATTATATCGG+TGG | 0.620768 | 7.3:+40178442 | None:intergenic |
TATGTTGTTGGTGAACCAGT+AGG | 0.621180 | 7.3:-40178347 | MS.gene84568:CDS |
ATATGTTCATCCACTTCAAG+TGG | 0.622032 | 7.3:+40178146 | None:intergenic |
ATGTATATCACAATTAACAT+GGG | 0.622921 | 7.3:-40178125 | MS.gene84568:CDS |
ACAGTTAATGGACTTTACCC+AGG | 0.628423 | 7.3:-40179707 | MS.gene84568:CDS |
TGTTCCAGCTATATAGTGCA+TGG | 0.629241 | 7.3:-40179044 | MS.gene84568:CDS |
CAACATAACTGGTCTTGTAG+GGG | 0.631983 | 7.3:-40178189 | MS.gene84568:CDS |
ATTGGTGTATTGTTGTGAAG+TGG | 0.636346 | 7.3:+40178230 | None:intergenic |
GGTATAGGGCTCGGTGTATG+CGG | 0.637849 | 7.3:+40178463 | None:intergenic |
TATAAGCTGAAAGTGAAGCA+AGG | 0.638942 | 7.3:-40178581 | MS.gene84568:CDS |
AATGGAAATCGACCGGAACG+AGG | 0.643895 | 7.3:+40178868 | None:intergenic |
TACCACTGTGAATTTGTGAT+CGG | 0.646281 | 7.3:+40178496 | None:intergenic |
CCAAAGCTGGAAGTCAGGGA+TGG | 0.647318 | 7.3:-40179683 | MS.gene84568:CDS |
GGTGGACCAAGTGAAGTTGA+AGG | 0.647739 | 7.3:+40177396 | None:intergenic |
CATTTAGGCAAATCAGCAGG+TGG | 0.649176 | 7.3:+40177375 | None:intergenic |
AACATAACTGGTCTTGTAGG+GGG | 0.652841 | 7.3:-40178188 | MS.gene84568:CDS |
TATGTTCATCCACTTCAAGT+GGG | 0.681147 | 7.3:+40178147 | None:intergenic |
GTGGATGATCATAATCTATG+GGG | 0.686953 | 7.3:-40177456 | MS.gene84568:CDS |
AACAAGAAGGAACATTATGG+TGG | 0.690252 | 7.3:-40178945 | MS.gene84568:CDS |
GTGACCCTCGTAAAAGACGA+CGG | 0.694689 | 7.3:+40178298 | None:intergenic |
ATTCAAATACAATTCAACGG+TGG | 0.707341 | 7.3:-40177847 | MS.gene84568:CDS |
TGCCGATCACAAATTCACAG+TGG | 0.784044 | 7.3:-40178498 | MS.gene84568:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTCTTGATTGTTTATTT+TGG | - | chr7.3:40180292-40180311 | MS.gene84568:intron | 15.0% |
!!! | ACATTATTTTTAACTTTCTT+TGG | - | chr7.3:40178341-40178360 | MS.gene84568:CDS | 15.0% |
!!! | GATAATCTTTTTAGAATAAT+AGG | + | chr7.3:40177761-40177780 | None:intergenic | 15.0% |
!!! | TCTAATTTTATCTTCATTTA+TGG | - | chr7.3:40177409-40177428 | MS.gene84568:CDS | 15.0% |
!!! | TTGTATGTAAATTTATTTTC+AGG | + | chr7.3:40178818-40178837 | None:intergenic | 15.0% |
!! | AAAAAAAAAATGCCTTCAAT+TGG | + | chr7.3:40178255-40178274 | None:intergenic | 20.0% |
!! | ATAAAATACTTATACATACC+AGG | + | chr7.3:40180185-40180204 | None:intergenic | 20.0% |
!! | ATGATTGCAATTAGTTATAT+TGG | + | chr7.3:40177567-40177586 | None:intergenic | 20.0% |
!! | ATGTATATCACAATTAACAT+GGG | - | chr7.3:40179672-40179691 | MS.gene84568:CDS | 20.0% |
!! | ATGTATCTATTCTAATACTT+GGG | + | chr7.3:40178563-40178582 | None:intergenic | 20.0% |
!! | ATTATCAAAACTCTATAGAA+AGG | - | chr7.3:40177775-40177794 | MS.gene84568:CDS | 20.0% |
!! | CAAATTATACTTGAGTTTAT+CGG | + | chr7.3:40180087-40180106 | None:intergenic | 20.0% |
!! | TATGTATATCACAATTAACA+TGG | - | chr7.3:40179671-40179690 | MS.gene84568:CDS | 20.0% |
!! | TGATTGCAATTAGTTATATT+GGG | + | chr7.3:40177566-40177585 | None:intergenic | 20.0% |
!! | TTACAACTTAATGAAATAGT+TGG | + | chr7.3:40178588-40178607 | None:intergenic | 20.0% |
!! | TTATAAATCTCACTTTCTTA+TGG | + | chr7.3:40177635-40177654 | None:intergenic | 20.0% |
!!! | AAAATCGTATGTTTCTATTT+CGG | - | chr7.3:40179107-40179126 | MS.gene84568:intron | 20.0% |
!!! | AAATTTTTTAGCAACATAAC+TGG | - | chr7.3:40179597-40179616 | MS.gene84568:intron | 20.0% |
!!! | CATTTTTTTTTTGCCAAATT+TGG | - | chr7.3:40178263-40178282 | MS.gene84568:CDS | 20.0% |
!!! | GATTTCACTATATTTTCTTT+TGG | - | chr7.3:40177918-40177937 | MS.gene84568:CDS | 20.0% |
!!! | TGAATTTTTGAACTATGTAA+AGG | - | chr7.3:40178723-40178742 | MS.gene84568:CDS | 20.0% |
!!! | TTAGGATCCAAAAATATTTT+CGG | + | chr7.3:40179894-40179913 | None:intergenic | 20.0% |
!!! | TTATTTTTAACTTTCTTTGG+TGG | - | chr7.3:40178344-40178363 | MS.gene84568:CDS | 20.0% |
! | AAAAATAATGTCTCATCTCA+TGG | + | chr7.3:40178332-40178351 | None:intergenic | 25.0% |
! | AGACATCGTATTATATATAC+AGG | + | chr7.3:40178426-40178445 | None:intergenic | 25.0% |
! | CAGTGAATTGTTATATTGTA+AGG | + | chr7.3:40178174-40178193 | None:intergenic | 25.0% |
! | CATGTATCTATTCTAATACT+TGG | + | chr7.3:40178564-40178583 | None:intergenic | 25.0% |
! | CGATAAACTCAAGTATAATT+TGG | - | chr7.3:40180085-40180104 | MS.gene84568:intron | 25.0% |
! | CTAAAAAATTTGTGAGCTAT+TGG | + | chr7.3:40179588-40179607 | None:intergenic | 25.0% |
! | CTTACAATATAACAATTCAC+TGG | - | chr7.3:40178172-40178191 | MS.gene84568:CDS | 25.0% |
! | GACATCGTATTATATATACA+GGG | + | chr7.3:40178425-40178444 | None:intergenic | 25.0% |
! | GCAATTCAAATACAATTCAA+CGG | - | chr7.3:40179947-40179966 | MS.gene84568:intron | 25.0% |
! | GTAAAAATATGCTTCCATTA+TGG | + | chr7.3:40179805-40179824 | None:intergenic | 25.0% |
! | TTATATATGAGTTCTTTCTC+TGG | + | chr7.3:40178638-40178657 | None:intergenic | 25.0% |
!! | CTATGACATAAATTTTTGCA+AGG | - | chr7.3:40177604-40177623 | MS.gene84568:intron | 25.0% |
!! | TAGGATCCAAAAATATTTTC+GGG | + | chr7.3:40179893-40179912 | None:intergenic | 25.0% |
!! | TGGTATGAATTTTCATGTTT+TGG | - | chr7.3:40180031-40180050 | MS.gene84568:intron | 25.0% |
!! | TTTACGAAGTCGAAAAATTT+TGG | + | chr7.3:40179870-40179889 | None:intergenic | 25.0% |
!!! | AATTTATTTTCAGGACGAAT+TGG | + | chr7.3:40178809-40178828 | None:intergenic | 25.0% |
!!! | GACTAATTAAATTCGCTTTT+TGG | + | chr7.3:40178495-40178514 | None:intergenic | 25.0% |
!!! | TTGGCTTCTAATGTTTTTTT+TGG | - | chr7.3:40177955-40177974 | MS.gene84568:CDS | 25.0% |
ACAGCATTCATAGTTGAAAA+TGG | - | chr7.3:40180371-40180390 | MS.gene84568:CDS | 30.0% | |
ATGTGGATGATCATAATCTA+TGG | - | chr7.3:40180339-40180358 | MS.gene84568:intron | 30.0% | |
ATTATTGGTACTTCCTTGTA+GGG | + | chr7.3:40178962-40178981 | None:intergenic | 30.0% | |
ATTCAAATACAATTCAACGG+TGG | - | chr7.3:40179950-40179969 | MS.gene84568:intron | 30.0% | |
ATTGAAATTGAATGAGTTGC+AGG | - | chr7.3:40178020-40178039 | MS.gene84568:CDS | 30.0% | |
CAAGTGATTGTTACAGTTAA+TGG | - | chr7.3:40178078-40178097 | MS.gene84568:CDS | 30.0% | |
CGTATTATATATACAGGGTT+CGG | + | chr7.3:40178420-40178439 | None:intergenic | 30.0% | |
CTAATTGCAATCATTTCTCA+CGG | - | chr7.3:40177573-40177592 | MS.gene84568:intron | 30.0% | |
GGACATTGTGTTATATATTC+TGG | + | chr7.3:40178788-40178807 | None:intergenic | 30.0% | |
GTATTATATATACAGGGTTC+GGG | + | chr7.3:40178419-40178438 | None:intergenic | 30.0% | |
TACCAATAATACTAGGTGAT+TGG | - | chr7.3:40178972-40178991 | MS.gene84568:CDS | 30.0% | |
TACCAATCACCTAGTATTAT+TGG | + | chr7.3:40178977-40178996 | None:intergenic | 30.0% | |
TATTATTGGTACTTCCTTGT+AGG | + | chr7.3:40178963-40178982 | None:intergenic | 30.0% | |
TGGAAAAGGATATTCCATAA+TGG | - | chr7.3:40179788-40179807 | MS.gene84568:intron | 30.0% | |
TGTGGATGATCATAATCTAT+GGG | - | chr7.3:40180340-40180359 | MS.gene84568:intron | 30.0% | |
TTTAATGTGACACAACAAGA+AGG | - | chr7.3:40178839-40178858 | MS.gene84568:intron | 30.0% | |
! | CATTAGAAGCCAATTTTACT+TGG | + | chr7.3:40177948-40177967 | None:intergenic | 30.0% |
! | CGTAAACCCGAAAATATTTT+TGG | - | chr7.3:40179884-40179903 | MS.gene84568:intron | 30.0% |
! | GACATAAATTTTTGCAAGGT+CGG | - | chr7.3:40177608-40177627 | MS.gene84568:intron | 30.0% |
! | GTTCTTTCTCTGGATTTTAA+TGG | + | chr7.3:40178628-40178647 | None:intergenic | 30.0% |
! | TTCGGTGTAAATGTAACATT+AGG | + | chr7.3:40179912-40179931 | None:intergenic | 30.0% |
! | TTCTCTTTATCTTTTTGCGA+AGG | - | chr7.3:40177822-40177841 | MS.gene84568:CDS | 30.0% |
! | TTTTGAACTATGTAAAGGCA+TGG | - | chr7.3:40178728-40178747 | MS.gene84568:CDS | 30.0% |
!! | AAAAATTTTGGAGGGTTATC+TGG | + | chr7.3:40179858-40179877 | None:intergenic | 30.0% |
!! | AAGGAAGTACCAATAATACT+AGG | - | chr7.3:40178965-40178984 | MS.gene84568:CDS | 30.0% |
!! | GCATATTTTTACAATGTGAG+TGG | - | chr7.3:40179813-40179832 | MS.gene84568:intron | 30.0% |
!!! | CTTGATTGTTTATTTTGGCA+GGG | - | chr7.3:40180297-40180316 | MS.gene84568:intron | 30.0% |
!!! | TCTTGATTGTTTATTTTGGC+AGG | - | chr7.3:40180296-40180315 | MS.gene84568:intron | 30.0% |
!!! | TTGATTGTTTATTTTGGCAG+GGG | - | chr7.3:40180298-40180317 | MS.gene84568:intron | 30.0% |
AAAGACCTATTTGTTCCGAA+TGG | - | chr7.3:40179239-40179258 | MS.gene84568:intron | 35.0% | |
AAATGCCTTCAATTGGTGAA+AGG | + | chr7.3:40178248-40178267 | None:intergenic | 35.0% | |
AACAAGAAGGAACATTATGG+TGG | - | chr7.3:40178852-40178871 | MS.gene84568:CDS | 35.0% | |
AACCCTGATCATTTACAACT+TGG | + | chr7.3:40177732-40177751 | None:intergenic | 35.0% | |
ACATATAGTACCTTTGATGC+CGG | - | chr7.3:40179539-40179558 | MS.gene84568:intron | 35.0% | |
ACCAAAAGGTTCATACTACA+TGG | - | chr7.3:40179416-40179435 | MS.gene84568:intron | 35.0% | |
ACGATTATATCGGTGGTATA+GGG | + | chr7.3:40179351-40179370 | None:intergenic | 35.0% | |
ATACTAGGTGATTGGTATGA+TGG | - | chr7.3:40178980-40178999 | MS.gene84568:CDS | 35.0% | |
ATATGTTCATCCACTTCAAG+TGG | + | chr7.3:40179654-40179673 | None:intergenic | 35.0% | |
ATCCAAAAAGAACTCGAAAC+AGG | - | chr7.3:40179019-40179038 | MS.gene84568:CDS | 35.0% | |
ATCGCTTGAGATGAATAAAC+GGG | - | chr7.3:40178377-40178396 | MS.gene84568:CDS | 35.0% | |
ATTATCATTCAACCTCGTTC+CGG | - | chr7.3:40178917-40178936 | MS.gene84568:CDS | 35.0% | |
ATTCATACCATGAAGATGCA+TGG | + | chr7.3:40180021-40180040 | None:intergenic | 35.0% | |
ATTGGTGTATTGTTGTGAAG+TGG | + | chr7.3:40179570-40179589 | None:intergenic | 35.0% | |
ATTTACACCGAAATCGACTA+AGG | - | chr7.3:40179920-40179939 | MS.gene84568:intron | 35.0% | |
CAATTGTGACGAACCAAATT+TGG | + | chr7.3:40178279-40178298 | None:intergenic | 35.0% | |
CACAACAAGAAGGAACATTA+TGG | - | chr7.3:40178849-40178868 | MS.gene84568:CDS | 35.0% | |
CATCGCTTGAGATGAATAAA+CGG | - | chr7.3:40178376-40178395 | MS.gene84568:CDS | 35.0% | |
CATTTAGCATTTACAGGACA+AGG | + | chr7.3:40179705-40179724 | None:intergenic | 35.0% | |
CCTGTAAATGCTAAATGTAC+AGG | - | chr7.3:40179708-40179727 | MS.gene84568:CDS | 35.0% | |
CCTGTACATTTAGCATTTAC+AGG | + | chr7.3:40179711-40179730 | None:intergenic | 35.0% | |
CTGTAACAATCACTTGTTCA+TGG | + | chr7.3:40178074-40178093 | None:intergenic | 35.0% | |
GTCCAAGTTGTAAATGATCA+GGG | - | chr7.3:40177727-40177746 | MS.gene84568:CDS | 35.0% | |
GTGGATGATCATAATCTATG+GGG | - | chr7.3:40180341-40180360 | MS.gene84568:intron | 35.0% | |
GTTATATTGGGTAAGCTAAG+TGG | + | chr7.3:40177554-40177573 | None:intergenic | 35.0% | |
TAACATTTAGGCAAATCAGC+AGG | + | chr7.3:40180428-40180447 | None:intergenic | 35.0% | |
TACCACTGTGAATTTGTGAT+CGG | + | chr7.3:40179304-40179323 | None:intergenic | 35.0% | |
TACTTGAGTTTATCGGTAGT+AGG | + | chr7.3:40180080-40180099 | None:intergenic | 35.0% | |
TATAAGCTGAAAGTGAAGCA+AGG | - | chr7.3:40179216-40179235 | MS.gene84568:intron | 35.0% | |
TATAGTGAAATCCACGTGTT+AGG | + | chr7.3:40177910-40177929 | None:intergenic | 35.0% | |
TATGTTCATCCACTTCAAGT+GGG | + | chr7.3:40179653-40179672 | None:intergenic | 35.0% | |
TCAAACCTTTCACCAATTGA+AGG | - | chr7.3:40178240-40178259 | MS.gene84568:CDS | 35.0% | |
TGCTGCAATGACGATTATAT+CGG | + | chr7.3:40179361-40179380 | None:intergenic | 35.0% | |
TGTCCAAGTTGTAAATGATC+AGG | - | chr7.3:40177726-40177745 | MS.gene84568:CDS | 35.0% | |
TTCATACCATGAAGATGCAT+GGG | + | chr7.3:40180020-40180039 | None:intergenic | 35.0% | |
TTTAGGAAATGGAAATCGAC+CGG | + | chr7.3:40178939-40178958 | None:intergenic | 35.0% | |
TTTGGACAGCCAAGTAAAAT+TGG | - | chr7.3:40177936-40177955 | MS.gene84568:CDS | 35.0% | |
! | ACGAAGTCGAAAAATTTTGG+AGG | + | chr7.3:40179867-40179886 | None:intergenic | 35.0% |
! | ATACTTGGGTTTACTAGTCT+TGG | + | chr7.3:40178549-40178568 | None:intergenic | 35.0% |
! | ATGGAATATCCTTTTCCAAC+AGG | + | chr7.3:40179786-40179805 | None:intergenic | 35.0% |
! | ATGGTTTTTGCATTGTCATG+TGG | - | chr7.3:40180322-40180341 | MS.gene84568:intron | 35.0% |
! | CGAAGTCGAAAAATTTTGGA+GGG | + | chr7.3:40179866-40179885 | None:intergenic | 35.0% |
! | CTTTATCTTTTTGCGAAGGT+GGG | - | chr7.3:40177826-40177845 | MS.gene84568:CDS | 35.0% |
! | GATGCAAATTTTTGTCCAAG+TGG | + | chr7.3:40179735-40179754 | None:intergenic | 35.0% |
! | GTCTGCTGTGAAAAGTATAT+CGG | + | chr7.3:40179394-40179413 | None:intergenic | 35.0% |
! | TCTTTATCTTTTTGCGAAGG+TGG | - | chr7.3:40177825-40177844 | MS.gene84568:CDS | 35.0% |
! | TGAAAAGTATATCGGCACTT+TGG | + | chr7.3:40179386-40179405 | None:intergenic | 35.0% |
! | TGTAGTATGAACCTTTTGGT+TGG | + | chr7.3:40179416-40179435 | None:intergenic | 35.0% |
! | TTGGTATGATGGAAATGTTG+AGG | - | chr7.3:40178991-40179010 | MS.gene84568:CDS | 35.0% |
! | TTTTTGCTTCCTGTTGGAAA+AGG | - | chr7.3:40179774-40179793 | MS.gene84568:intron | 35.0% |
!! | CTTTCTCTGGATTTTAATGG+TGG | + | chr7.3:40178625-40178644 | None:intergenic | 35.0% |
!! | TTTGGTGTTATGGCAAACAT+GGG | - | chr7.3:40177379-40177398 | MS.gene84568:CDS | 35.0% |
!!! | TTTTGGTGTTATGGCAAACA+TGG | - | chr7.3:40177378-40177397 | MS.gene84568:CDS | 35.0% |
ACATACCAGGATTGTCAGTT+CGG | + | chr7.3:40180172-40180191 | None:intergenic | 40.0% | |
CAAATACAATTCAACGGTGG+AGG | - | chr7.3:40179953-40179972 | MS.gene84568:intron | 40.0% | |
CTATATAGTGCATGGTCAGA+CGG | - | chr7.3:40178761-40178780 | MS.gene84568:CDS | 40.0% | |
GAACAATTGAAGAGATCACC+AGG | + | chr7.3:40179085-40179104 | None:intergenic | 40.0% | |
GAATCCTTCAATTCGCAACA+CGG | - | chr7.3:40180109-40180128 | MS.gene84568:intron | 40.0% | |
GACGATTATATCGGTGGTAT+AGG | + | chr7.3:40179352-40179371 | None:intergenic | 40.0% | |
GATATAATCGTCATTGCAGC+AGG | - | chr7.3:40179360-40179379 | MS.gene84568:intron | 40.0% | |
GGAACGAGGTTGAATGATAA+TGG | + | chr7.3:40178918-40178937 | None:intergenic | 40.0% | |
GTTGACCATTCGGAACAAAT+AGG | + | chr7.3:40179247-40179266 | None:intergenic | 40.0% | |
TACAGTTGAACGCACTTTCT+TGG | - | chr7.3:40177442-40177461 | MS.gene84568:CDS | 40.0% | |
TCCATTTCCTAAACCCTACA+AGG | - | chr7.3:40178946-40178965 | MS.gene84568:CDS | 40.0% | |
TCCTTGTAGGGTTTAGGAAA+TGG | + | chr7.3:40178950-40178969 | None:intergenic | 40.0% | |
TCGATCTCTTGAGCATAACT+CGG | + | chr7.3:40178456-40178475 | None:intergenic | 40.0% | |
TCTGATGCGTTCACTATCAA+CGG | - | chr7.3:40179055-40179074 | MS.gene84568:CDS | 40.0% | |
TGCAATGACGATTATATCGG+TGG | + | chr7.3:40179358-40179377 | None:intergenic | 40.0% | |
TGTTCCAGCTATATAGTGCA+TGG | - | chr7.3:40178753-40178772 | MS.gene84568:CDS | 40.0% | |
! | ACTGGTTCACCAACAACATA+AGG | + | chr7.3:40179450-40179469 | None:intergenic | 40.0% |
! | GCCATGTAGTATGAACCTTT+TGG | + | chr7.3:40179420-40179439 | None:intergenic | 40.0% |
! | TATGTTGTTGGTGAACCAGT+AGG | - | chr7.3:40179450-40179469 | MS.gene84568:intron | 40.0% |
! | TGCTTCACCTTAGTCGATTT+CGG | + | chr7.3:40179930-40179949 | None:intergenic | 40.0% |
! | TTGTTGTGAAGTGGTAATGC+CGG | + | chr7.3:40179561-40179580 | None:intergenic | 40.0% |
!! | AACATAACTGGTCTTGTAGG+GGG | - | chr7.3:40179609-40179628 | MS.gene84568:intron | 40.0% |
!! | ACAGTTAATGGACTTTACCC+AGG | - | chr7.3:40178090-40178109 | MS.gene84568:CDS | 40.0% |
!! | AGCAACATAACTGGTCTTGT+AGG | - | chr7.3:40179606-40179625 | MS.gene84568:intron | 40.0% |
!! | CAACATAACTGGTCTTGTAG+GGG | - | chr7.3:40179608-40179627 | MS.gene84568:intron | 40.0% |
!! | GCAACATAACTGGTCTTGTA+GGG | - | chr7.3:40179607-40179626 | MS.gene84568:intron | 40.0% |
!! | TTGATAGTGAACGCATCAGA+TGG | + | chr7.3:40179055-40179074 | None:intergenic | 40.0% |
!!! | ATGTTTTGGCTCAAGACTTC+GGG | - | chr7.3:40180045-40180064 | MS.gene84568:intron | 40.0% |
!!! | CATGTTTTGGCTCAAGACTT+CGG | - | chr7.3:40180044-40180063 | MS.gene84568:intron | 40.0% |
!!! | GAGTCATTTTTGCTTCCTGT+TGG | - | chr7.3:40179768-40179787 | MS.gene84568:intron | 40.0% |
!!! | TGTTTATTTTGGCAGGGGTA+TGG | - | chr7.3:40180303-40180322 | MS.gene84568:intron | 40.0% |
AGATTCCGAACTGACAATCC+TGG | - | chr7.3:40180164-40180183 | MS.gene84568:intron | 45.0% | |
AGTCATCCCATGCATCTTCA+TGG | - | chr7.3:40180011-40180030 | MS.gene84568:intron | 45.0% | |
CAAATTCACAGTGGTAGCCA+TGG | - | chr7.3:40179308-40179327 | MS.gene84568:intron | 45.0% | |
CATTTAGGCAAATCAGCAGG+TGG | + | chr7.3:40180425-40180444 | None:intergenic | 45.0% | |
CCAACACCTTCAACTTCACT+TGG | - | chr7.3:40180395-40180414 | MS.gene84568:CDS | 45.0% | |
CTGACCATGCACTATATAGC+TGG | + | chr7.3:40178760-40178779 | None:intergenic | 45.0% | |
GAATTGTCGAAGAGTCCTAC+TGG | + | chr7.3:40179468-40179487 | None:intergenic | 45.0% | |
GCTAAATGTACAGGTCCACT+TGG | - | chr7.3:40179717-40179736 | MS.gene84568:CDS | 45.0% | |
GCTGCATCACCTTATGTTGT+TGG | - | chr7.3:40179438-40179457 | MS.gene84568:intron | 45.0% | |
GGTACTTCCTTGTAGGGTTT+AGG | + | chr7.3:40178956-40178975 | None:intergenic | 45.0% | |
GTGAAATCCACGTGTTAGGT+CGG | + | chr7.3:40177906-40177925 | None:intergenic | 45.0% | |
GTTGTACGTGCAACAGTTCA+TGG | - | chr7.3:40178890-40178909 | MS.gene84568:CDS | 45.0% | |
TATATCGGTGGTATAGGGCT+CGG | + | chr7.3:40179346-40179365 | None:intergenic | 45.0% | |
TCTTGTAGGGGGTCCTAATT+GGG | - | chr7.3:40179620-40179639 | MS.gene84568:intron | 45.0% | |
TGAAATCCACGTGTTAGGTC+GGG | + | chr7.3:40177905-40177924 | None:intergenic | 45.0% | |
TGCCGATCACAAATTCACAG+TGG | - | chr7.3:40179299-40179318 | MS.gene84568:intron | 45.0% | |
TTCACAGCAGACCAACCAAA+AGG | - | chr7.3:40179402-40179421 | MS.gene84568:intron | 45.0% | |
TTCACTATCAACGGCTTTCC+TGG | - | chr7.3:40179064-40179083 | MS.gene84568:intron | 45.0% | |
! | ACAGGGTTCGGGTTTAAACT+CGG | + | chr7.3:40178408-40178427 | None:intergenic | 45.0% |
! | ATCTTTTTGCGAAGGTGGGT+TGG | - | chr7.3:40177830-40177849 | MS.gene84568:CDS | 45.0% |
! | CCAAGTGAAGTTGAAGGTGT+TGG | + | chr7.3:40180398-40180417 | None:intergenic | 45.0% |
!! | TCTTTTTGCGAAGGTGGGTT+GGG | - | chr7.3:40177831-40177850 | MS.gene84568:CDS | 45.0% |
!!! | CGCCTGTTTCGAGTTCTTTT+TGG | + | chr7.3:40179024-40179043 | None:intergenic | 45.0% |
AATGGAAATCGACCGGAACG+AGG | + | chr7.3:40178932-40178951 | None:intergenic | 50.0% | |
AATTTCCCCGACCTAACACG+TGG | - | chr7.3:40177896-40177915 | MS.gene84568:CDS | 50.0% | |
ACGTGTTAGGTCGGGGAAAT+TGG | + | chr7.3:40177897-40177916 | None:intergenic | 50.0% | |
ACTTTACCCAGGTCCAAAGC+TGG | - | chr7.3:40178101-40178120 | MS.gene84568:CDS | 50.0% | |
AGGTCCAAAGCTGGAAGTCA+GGG | - | chr7.3:40178110-40178129 | MS.gene84568:CDS | 50.0% | |
CATCCACTTCAAGTGGGACA+GGG | + | chr7.3:40179647-40179666 | None:intergenic | 50.0% | |
GAAATCCACGTGTTAGGTCG+GGG | + | chr7.3:40177904-40177923 | None:intergenic | 50.0% | |
GCAACCGTGTTGCGAATTGA+AGG | + | chr7.3:40180116-40180135 | None:intergenic | 50.0% | |
GGTGGACCAAGTGAAGTTGA+AGG | + | chr7.3:40180404-40180423 | None:intergenic | 50.0% | |
GTCTTGTAGGGGGTCCTAAT+TGG | - | chr7.3:40179619-40179638 | MS.gene84568:intron | 50.0% | |
GTGACCCTCGTAAAAGACGA+CGG | + | chr7.3:40179502-40179521 | None:intergenic | 50.0% | |
TCATCCACTTCAAGTGGGAC+AGG | + | chr7.3:40179648-40179667 | None:intergenic | 50.0% | |
TTAGGCAAATCAGCAGGTGG+TGG | + | chr7.3:40180422-40180441 | None:intergenic | 50.0% | |
! | AGTGGTAATGCCGGCATCAA+AGG | + | chr7.3:40179552-40179571 | None:intergenic | 50.0% |
! | CAGGGTTCGGGTTTAAACTC+GGG | + | chr7.3:40178407-40178426 | None:intergenic | 50.0% |
!! | TGACTTCCAGCTTTGGACCT+GGG | + | chr7.3:40178110-40178129 | None:intergenic | 50.0% |
!!! | CTTTTTGCGAAGGTGGGTTG+GGG | - | chr7.3:40177832-40177851 | MS.gene84568:CDS | 50.0% |
AAAGACGACGGCACGAGTTG+TGG | + | chr7.3:40179490-40179509 | None:intergenic | 55.0% | |
AGTGGGACAGGGACCCAATT+AGG | + | chr7.3:40179636-40179655 | None:intergenic | 55.0% | |
CAGGTCCAAAGCTGGAAGTC+AGG | - | chr7.3:40178109-40178128 | MS.gene84568:CDS | 55.0% | |
CCAAAGCTGGAAGTCAGGGA+TGG | - | chr7.3:40178114-40178133 | MS.gene84568:CDS | 55.0% | |
CCATCCCTGACTTCCAGCTT+TGG | + | chr7.3:40178117-40178136 | None:intergenic | 55.0% | |
! | CGTGCCGTCGTCTTTTACGA+GGG | - | chr7.3:40179495-40179514 | MS.gene84568:intron | 55.0% |
! | TCGTGCCGTCGTCTTTTACG+AGG | - | chr7.3:40179494-40179513 | MS.gene84568:intron | 55.0% |
!! | CGAGTGCAGCGTTGACCATT+CGG | + | chr7.3:40179257-40179276 | None:intergenic | 55.0% |
!! | CTGACTTCCAGCTTTGGACC+TGG | + | chr7.3:40178111-40178130 | None:intergenic | 55.0% |
!! | GGTATAGGGCTCGGTGTATG+CGG | + | chr7.3:40179337-40179356 | None:intergenic | 55.0% |
ATAGCAGCCCATCCTCCCAC+CGG | + | chr7.3:40180143-40180162 | None:intergenic | 60.0% | |
GGTCCCTGTCCCACTTGAAG+TGG | - | chr7.3:40179641-40179660 | MS.gene84568:CDS | 60.0% | |
TCGCAACACGGTTGCTGTGC+CGG | - | chr7.3:40180121-40180140 | MS.gene84568:intron | 60.0% | |
! | AACACGGTTGCTGTGCCGGT+GGG | - | chr7.3:40180125-40180144 | MS.gene84568:intron | 60.0% |
!! | CGAAGGTGGGTTGGGGAAAC+TGG | - | chr7.3:40177839-40177858 | MS.gene84568:CDS | 60.0% |
CAACACGGTTGCTGTGCCGG+TGG | - | chr7.3:40180124-40180143 | MS.gene84568:intron | 65.0% | |
! | CTCGGTGTATGCGGCGTCCA+TGG | + | chr7.3:40179328-40179347 | None:intergenic | 65.0% |
! | TGCTGTGCCGGTGGGAGGAT+GGG | - | chr7.3:40180133-40180152 | MS.gene84568:intron | 65.0% |
! | TTGCTGTGCCGGTGGGAGGA+TGG | - | chr7.3:40180132-40180151 | MS.gene84568:intron | 65.0% |
! | ACGGTTGCTGTGCCGGTGGG+AGG | - | chr7.3:40180128-40180147 | MS.gene84568:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 40177371 | 40180448 | 40177371 | ID=MS.gene84568 |
chr7.3 | mRNA | 40177371 | 40180448 | 40177371 | ID=MS.gene84568.t1;Parent=MS.gene84568 |
chr7.3 | exon | 40180356 | 40180448 | 40180356 | ID=MS.gene84568.t1.exon1;Parent=MS.gene84568.t1 |
chr7.3 | CDS | 40180356 | 40180448 | 40180356 | ID=cds.MS.gene84568.t1;Parent=MS.gene84568.t1 |
chr7.3 | exon | 40179626 | 40179777 | 40179626 | ID=MS.gene84568.t1.exon2;Parent=MS.gene84568.t1 |
chr7.3 | CDS | 40179626 | 40179777 | 40179626 | ID=cds.MS.gene84568.t1;Parent=MS.gene84568.t1 |
chr7.3 | exon | 40178849 | 40179074 | 40178849 | ID=MS.gene84568.t1.exon3;Parent=MS.gene84568.t1 |
chr7.3 | CDS | 40178849 | 40179074 | 40178849 | ID=cds.MS.gene84568.t1;Parent=MS.gene84568.t1 |
chr7.3 | exon | 40178707 | 40178806 | 40178707 | ID=MS.gene84568.t1.exon4;Parent=MS.gene84568.t1 |
chr7.3 | CDS | 40178707 | 40178806 | 40178707 | ID=cds.MS.gene84568.t1;Parent=MS.gene84568.t1 |
chr7.3 | exon | 40177634 | 40178608 | 40177634 | ID=MS.gene84568.t1.exon5;Parent=MS.gene84568.t1 |
chr7.3 | CDS | 40177634 | 40178608 | 40177634 | ID=cds.MS.gene84568.t1;Parent=MS.gene84568.t1 |
chr7.3 | exon | 40177371 | 40177501 | 40177371 | ID=MS.gene84568.t1.exon6;Parent=MS.gene84568.t1 |
chr7.3 | CDS | 40177371 | 40177501 | 40177371 | ID=cds.MS.gene84568.t1;Parent=MS.gene84568.t1 |
Gene Sequence |
Protein sequence |