AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene99043

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99043.t1 MTR_4g024630 98.912 735 8 0 1 735 1 735 0.0 1503
MS.gene99043.t1 MTR_5g059410 87.758 678 83 0 57 734 57 734 0.0 1250
MS.gene99043.t1 MTR_1g116120 87.758 678 83 0 57 734 57 734 0.0 1250
MS.gene99043.t1 MTR_4g024630 99.483 580 3 0 156 735 2 581 0.0 1191
MS.gene99043.t1 MTR_0776s0010 47.333 750 360 13 3 725 840 1581 0.0 624
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene99043.t1 AT2G45290 79.324 740 143 3 5 735 3 741 0.0 1221
MS.gene99043.t1 AT2G45290 79.324 740 143 3 5 735 3 741 0.0 1221
MS.gene99043.t1 AT3G60750 78.514 740 149 2 5 735 3 741 0.0 1204
MS.gene99043.t1 AT3G60750 78.514 740 148 3 5 735 3 740 0.0 1201

Find 223 sgRNAs with CRISPR-Local

Find 388 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTTGGGTGGCATGTTATT+TGG 0.165907 4.1:+74135332 MS.gene99043:CDS
TTAAACCAAAACGGATTCTT+TGG 0.234233 4.1:-74132989 None:intergenic
TCTTGTGGCATCAACTTCTT+TGG 0.239047 4.1:-74136016 None:intergenic
GGATTGAGAGAGGTGGGTGG+TGG 0.239471 4.1:-74132759 None:intergenic
TTGAGAGAGGTGGGTGGTGG+GGG 0.256953 4.1:-74132756 None:intergenic
TTCTATAGGTATTGTATATT+GGG 0.257909 4.1:+74135151 MS.gene99043:intron
TTTCTATAGGTATTGTATAT+TGG 0.260478 4.1:+74135150 MS.gene99043:intron
GAGTTGTTTCCTTTGTTTCT+TGG 0.277523 4.1:+74137160 MS.gene99043:CDS
TATGCTTTGCTTCATCTTGC+TGG 0.279540 4.1:+74133058 MS.gene99043:CDS
ATTGAGAGAGGTGGGTGGTG+GGG 0.297131 4.1:-74132757 None:intergenic
CTGTAGGAGTTGGATTTATT+CGG 0.309810 4.1:-74135970 None:intergenic
AGTTGTTTCCTTTGTTTCTT+GGG 0.312843 4.1:+74137161 MS.gene99043:CDS
ACTCTCAGTGAACGCGATTT+CGG 0.313774 4.1:-74135290 None:intergenic
ACTTGGGTGGCATGTTATTT+GGG 0.323384 4.1:+74135333 MS.gene99043:CDS
GGATGTGAGGCGCGTGAGAT+TGG 0.324515 4.1:-74132672 None:intergenic
CCGTTTCCTTGCGGTTGATT+CGG 0.326554 4.1:+74132877 MS.gene99043:CDS
ACAAAGTTGCGGTGCTTAAC+AGG 0.328102 4.1:+74136932 MS.gene99043:CDS
CCAGGAGTTTCAAAATTCTC+AGG 0.328165 4.1:-74134749 None:intergenic
GCAATCGGCATTGATCGTTT+TGG 0.329334 4.1:+74137309 MS.gene99043:CDS
GGGCGGAGCATCAAGATATT+TGG 0.330195 4.1:-74136880 None:intergenic
AATGAAGCTTGCTCACTTGC+AGG 0.330765 4.1:+74135202 MS.gene99043:CDS
TAGAGCACCTGGCAAGCTTC+CGG 0.331331 4.1:+74136851 MS.gene99043:CDS
GTTGCATCGGCAGGGATCTC+TGG 0.332471 4.1:-74136466 None:intergenic
GAACATTCGCAAGGGCATTA+AGG 0.334104 4.1:-74136510 None:intergenic
TCGCAGTTCACAACAACTAT+TGG 0.337717 4.1:+74135937 MS.gene99043:intron
TGAAATTCGTGCTGCCATTA+AGG 0.343448 4.1:+74135381 MS.gene99043:CDS
GATCGGAACCGGTTCCGAAT+TGG 0.348733 4.1:+74137086 MS.gene99043:CDS
GATGTGAGGCGCGTGAGATT+GGG 0.358641 4.1:-74132671 None:intergenic
GCCCTTGCGAATGTTCTTCC+CGG 0.361812 4.1:+74136517 MS.gene99043:CDS
CGGTTGAGGGTGATGGTGGA+TGG 0.367254 4.1:-74132725 None:intergenic
TGCAATTTCCAATTCGGAAC+CGG 0.369729 4.1:-74137094 None:intergenic
TTCACAACAACTATTGGTTA+TGG 0.371247 4.1:+74135943 MS.gene99043:CDS
TGGTGTGCGGTTGAGGGTGA+TGG 0.372867 4.1:-74132732 None:intergenic
GATTGAGAGAGGTGGGTGGT+GGG 0.374933 4.1:-74132758 None:intergenic
ACCTATGGGTTGTGCTCCAA+TGG 0.375675 4.1:+74132931 MS.gene99043:CDS
TTTGTATGCAATTTCCAATT+CGG 0.377921 4.1:-74137100 None:intergenic
TTCTATTGAAGGAGTTGAAA+AGG 0.389406 4.1:+74137011 MS.gene99043:CDS
GCATTGCCCGGAAGCTTGCC+AGG 0.390101 4.1:-74136858 None:intergenic
TCAAAATTCTCAGGGTGTCC+AGG 0.392747 4.1:-74134740 None:intergenic
ATAATCCAAAGAATCCGTTT+TGG 0.393724 4.1:+74132984 MS.gene99043:CDS
AATGTTCTTCCCGGTCTGAT+TGG 0.393930 4.1:+74136526 MS.gene99043:CDS
GGATGGCGGTGTGGCGGAGA+TGG 0.394882 4.1:-74132784 None:intergenic
GGGTCATCCTGGTTTACCTA+TGG 0.396435 4.1:+74132916 MS.gene99043:CDS
GGAACAATATACAAAGAGTT+TGG 0.397042 4.1:+74137348 MS.gene99043:CDS
AACTCCTTCAATAGAAGTTC+CGG 0.404053 4.1:-74137004 None:intergenic
AGAGCACCTGGCAAGCTTCC+GGG 0.404549 4.1:+74136852 MS.gene99043:CDS
TGGCGATTTACCTGCTGGTT+GGG 0.404773 4.1:+74136295 MS.gene99043:CDS
ATTGTCGGGCTTGTTAAATC+TGG 0.405666 4.1:-74135020 None:intergenic
GCAGAGCGTAACGTTAGATT+TGG 0.407664 4.1:+74136622 MS.gene99043:CDS
CATGTTATTTGGGTAAAGAA+TGG 0.408155 4.1:+74135343 MS.gene99043:CDS
CCTGTTGTGACTTCAATTCC+AGG 0.410667 4.1:-74134767 None:intergenic
AGGTTTCGGGTTGCATCGGC+AGG 0.411643 4.1:-74136475 None:intergenic
GTTGGTGAGAGAGAGGGAAG+TGG 0.411984 4.1:-74132648 None:intergenic
ATTTGAAGCAATTTCGTCAA+TGG 0.412981 4.1:+74134705 MS.gene99043:CDS
CTCCCACCCGAATGTTGATC+CGG 0.413707 4.1:-74137262 None:intergenic
CTTGCAGGACACTGGGGACT+AGG 0.424166 4.1:+74135217 MS.gene99043:CDS
CCCTACTGCTGTTACGGCTA+GGG 0.425285 4.1:+74137227 MS.gene99043:CDS
GACATATATAACACCGGCTT+CGG 0.430122 4.1:-74136776 None:intergenic
AAGAGAGGCGCGTGGTGGAT+GGG 0.430849 4.1:-74132697 None:intergenic
TTTGAAGCAATTTCGTCAAT+GGG 0.431071 4.1:+74134706 MS.gene99043:CDS
ATTGAGGCCGGATCAACATT+CGG 0.433032 4.1:+74137255 MS.gene99043:CDS
TGGCGGTGTGGCGGAGATGG+TGG 0.434765 4.1:-74132781 None:intergenic
TGGTTGGGAGAAAGCACTTC+CGG 0.437142 4.1:+74136310 MS.gene99043:CDS
TCTAGAAAGGGCAAGGATAG+AGG 0.439993 4.1:-74136962 None:intergenic
TAAACCAGGATGACCCGAAT+TGG 0.441726 4.1:-74132909 None:intergenic
AGAGAGGCGCGTGGTGGATG+GGG 0.442811 4.1:-74132696 None:intergenic
AAGCTTGCCAGGTGCTCTAT+AGG 0.443449 4.1:-74136847 None:intergenic
CCGAATCAACCGCAAGGAAA+CGG 0.444909 4.1:-74132877 None:intergenic
TATAACACCGGCTTCGGATA+GGG 0.445320 4.1:-74136770 None:intergenic
GGCACGTGGAAAGGCTCATA+TGG 0.445479 4.1:-74136054 None:intergenic
GACAATCACATTTCTATTGA+CGG 0.446265 4.1:+74135262 MS.gene99043:CDS
TGCTGGATATGACAGTGTTC+AGG 0.446747 4.1:+74133075 MS.gene99043:CDS
GGTCATCCTGGTTTACCTAT+GGG 0.448870 4.1:+74132917 MS.gene99043:CDS
TTCGGGTGGGAGAAAATTGT+TGG 0.449505 4.1:+74137273 MS.gene99043:CDS
AATCTAACGTTACGCTCTGC+TGG 0.452620 4.1:-74136619 None:intergenic
ACTACATGCGTGGTGCCATT+AGG 0.453398 4.1:+74136740 MS.gene99043:CDS
TCCCTACTGCTGTTACGGCT+AGG 0.455024 4.1:+74137226 MS.gene99043:CDS
ATAGAAGTTCCGGCAAGGTT+AGG 0.455709 4.1:-74136994 None:intergenic
CAGCTAAGTGCTTCTCTGCA+AGG 0.457975 4.1:-74134997 None:intergenic
ATATAACACCGGCTTCGGAT+AGG 0.459608 4.1:-74136771 None:intergenic
GCTGTTTCGTTACCATCAGC+GGG 0.459617 4.1:-74136901 None:intergenic
TGTTCTCCCTACTGCTGTTA+CGG 0.460415 4.1:+74137221 MS.gene99043:CDS
TTGAGGCCGGATCAACATTC+GGG 0.463847 4.1:+74137256 MS.gene99043:CDS
ATCGTCTCTGACAACTCAAC+AGG 0.465225 4.1:+74137042 MS.gene99043:CDS
TCTTTGTATATTGTTCCTGC+AGG 0.467549 4.1:-74137342 None:intergenic
TGCACTGCCGCCAATCAGAC+CGG 0.471254 4.1:-74136536 None:intergenic
TGCTCTATAGGCTGGTGGGT+TGG 0.475899 4.1:-74136835 None:intergenic
CCTATGGGTTGTGCTCCAAT+GGG 0.477027 4.1:+74132932 MS.gene99043:CDS
ATTGGGTGATGGTTGTCAAA+TGG 0.477289 4.1:+74135168 MS.gene99043:CDS
ATCAGTGGCGATTTACCTGC+TGG 0.477834 4.1:+74136290 MS.gene99043:CDS
CTTGCTCACTTGCAGGACAC+TGG 0.478425 4.1:+74135209 MS.gene99043:CDS
CAGGGCATTGCCAATGCTGT+TGG 0.481434 4.1:+74134968 MS.gene99043:CDS
GAAGAGAGGCGCGTGGTGGA+TGG 0.482024 4.1:-74132698 None:intergenic
GAGCAGCACCCTCACGGATG+TGG 0.483979 4.1:-74136190 None:intergenic
CTTGCCGGAACTTCTATTGA+AGG 0.488516 4.1:+74137000 MS.gene99043:CDS
GGCGGTGTGGCGGAGATGGT+GGG 0.488869 4.1:-74132780 None:intergenic
CAAAATTCTCAGGGTGTCCA+GGG 0.491690 4.1:-74134739 None:intergenic
GATTGGGGTTGGTGAGAGAG+AGG 0.492896 4.1:-74132655 None:intergenic
CCAGGTGCTCTATAGGCTGG+TGG 0.494759 4.1:-74136840 None:intergenic
TCTATTGAAGGAGTTGAAAA+GGG 0.494796 4.1:+74137012 MS.gene99043:CDS
TTGCTCACTTGCAGGACACT+GGG 0.494803 4.1:+74135210 MS.gene99043:CDS
GGTTGAGGGTGATGGTGGAT+GGG 0.495802 4.1:-74132724 None:intergenic
TCAAGATATTTGGCATTGCC+CGG 0.496204 4.1:-74136870 None:intergenic
TGAACAATCACAAGCTTACA+AGG 0.497028 4.1:+74137194 MS.gene99043:CDS
GTTCCGATCAAAATGACATC+AGG 0.497616 4.1:-74137072 None:intergenic
AGCTGTTTCGTTACCATCAG+CGG 0.500541 4.1:-74136902 None:intergenic
AAAGCCAATTCGGGTCATCC+TGG 0.501100 4.1:+74132905 MS.gene99043:CDS
TTGCAGGACACTGGGGACTA+GGG 0.502548 4.1:+74135218 MS.gene99043:CDS
GATGAGTCTGTGGTGGTTGA+CGG 0.502862 4.1:-74132827 None:intergenic
GATGCCACAAGAAACAATCT+TGG 0.505359 4.1:+74136027 MS.gene99043:CDS
CCTGGAATTGAAGTCACAAC+AGG 0.506192 4.1:+74134767 MS.gene99043:CDS
GTGGCGATTTACCTGCTGGT+TGG 0.506566 4.1:+74136294 MS.gene99043:CDS
GTTCTTCCCGGTCTGATTGG+CGG 0.506753 4.1:+74136529 MS.gene99043:CDS
GGATAGGGCGGAAAGCCTAA+TGG 0.509150 4.1:-74136755 None:intergenic
TTGCCAGGTGCTCTATAGGC+TGG 0.512357 4.1:-74136843 None:intergenic
GCTCTGCTGGAGAATCACTT+TGG 0.513151 4.1:-74136606 None:intergenic
GAGGCGCGTGGTGGATGGGG+AGG 0.514640 4.1:-74132693 None:intergenic
ACATCCTCGGGCACGTGGAA+AGG 0.514742 4.1:-74136063 None:intergenic
CAGGAGTTTCAAAATTCTCA+GGG 0.514921 4.1:-74134748 None:intergenic
TGGTGTTAGAGAACATGGAA+TGG 0.515232 4.1:+74136642 MS.gene99043:CDS
CCATCCAAGATTGTTTCTTG+TGG 0.515955 4.1:-74136031 None:intergenic
TCCATGCACACTGTAGGAGT+TGG 0.516035 4.1:-74135980 None:intergenic
TCAATAGGACTTGGAGAGGA+TGG 0.517033 4.1:+74136811 MS.gene99043:CDS
GCTGATGGTAACGAAACAGC+TGG 0.517357 4.1:+74136904 MS.gene99043:CDS
AAACTAACCTTGATCAATGT+GGG 0.518234 4.1:-74135427 None:intergenic
CGATAGGTTTCGGGTTGCAT+CGG 0.518470 4.1:-74136479 None:intergenic
GTCATGACTCACGATTCAAT+AGG 0.519509 4.1:+74136796 MS.gene99043:CDS
TGCTGAGACGGATGCATGGA+TGG 0.523063 4.1:-74132801 None:intergenic
AGATTTGGTGTTAGAGAACA+TGG 0.524137 4.1:+74136637 MS.gene99043:CDS
TTGATGCTCCGCCCCGCTGA+TGG 0.525377 4.1:+74136889 MS.gene99043:CDS
GGTGAGGATCTAAGAAAAGA+AGG 0.525397 4.1:+74137126 MS.gene99043:CDS
GGTGTTAGAGAACATGGAAT+GGG 0.527853 4.1:+74136643 MS.gene99043:CDS
GGAAGCAAAGGAAAAGCAAT+CGG 0.531510 4.1:+74137294 MS.gene99043:CDS
CAGGTGCTCTATAGGCTGGT+GGG 0.534576 4.1:-74136839 None:intergenic
CAACACGATCCGTTTCCTTG+CGG 0.535478 4.1:+74132868 MS.gene99043:CDS
ATTGGGGTTGGTGAGAGAGA+GGG 0.536610 4.1:-74132654 None:intergenic
ACCCTAGCCGTAACAGCAGT+AGG 0.537823 4.1:-74137228 None:intergenic
CAATGGGAGAGCAGAACCCC+TGG 0.538408 4.1:+74134722 MS.gene99043:CDS
ATGATCGACGATCTCATTGT+CGG 0.538486 4.1:-74135035 None:intergenic
GGGTGATGGTTGTCAAATGG+AGG 0.538756 4.1:+74135171 MS.gene99043:CDS
AGCTAAGTGCTTCTCTGCAA+GGG 0.538991 4.1:-74134996 None:intergenic
TGATCGACGATCTCATTGTC+GGG 0.540061 4.1:-74135034 None:intergenic
TTTCCAGGTCCTCTTGGTCA+GGG 0.542477 4.1:+74134950 MS.gene99043:intron
TTGGAAATTGCATACAAAGC+TGG 0.542667 4.1:+74137105 MS.gene99043:CDS
TGTGCGGTTGAGGGTGATGG+TGG 0.544885 4.1:-74132729 None:intergenic
CCACCAGCCTATAGAGCACC+TGG 0.545054 4.1:+74136840 MS.gene99043:CDS
TCCAACTCCTACAGTGTGCA+TGG 0.548707 4.1:+74135979 MS.gene99043:CDS
CGATCACGGTTAAACCAAAA+CGG 0.549172 4.1:-74132998 None:intergenic
CTGATGGTAACGAAACAGCT+GGG 0.549365 4.1:+74136905 MS.gene99043:CDS
ATGGTGGGATTGAGAGAGGT+GGG 0.549623 4.1:-74132765 None:intergenic
TCATAAAGCACATGACCCAT+TGG 0.550537 4.1:-74132947 None:intergenic
AGTGCTTTCTCCCAACCAGC+AGG 0.552628 4.1:-74136305 None:intergenic
AGACAGACCCACATTGATCA+AGG 0.553564 4.1:+74135420 MS.gene99043:CDS
GTGGGATTGAGAGAGGTGGG+TGG 0.558444 4.1:-74132762 None:intergenic
ATTGAAGGAGTTGAAAAGGG+TGG 0.558611 4.1:+74137015 MS.gene99043:CDS
GAGAAAATTGTTGGAAGCAA+AGG 0.558787 4.1:+74137282 MS.gene99043:CDS
CTTTCCGCCCTATCCGAAGC+CGG 0.562775 4.1:+74136763 MS.gene99043:CDS
GATGGTGGGATTGAGAGAGG+TGG 0.566012 4.1:-74132766 None:intergenic
GCACTGCCGCCAATCAGACC+GGG 0.567223 4.1:-74136535 None:intergenic
CTAGAAAGGGCAAGGATAGA+GGG 0.568237 4.1:-74136961 None:intergenic
AAAACTAACCTTGATCAATG+TGG 0.568500 4.1:-74135428 None:intergenic
GGCATCGCTCTTCACAGCCG+TGG 0.571825 4.1:+74136679 MS.gene99043:CDS
GGAGATGGTGGGATTGAGAG+AGG 0.572397 4.1:-74132769 None:intergenic
TGGTGGATGGGGAGGATGTG+AGG 0.572558 4.1:-74132685 None:intergenic
ATGCATGGATGGCGGTGTGG+CGG 0.580470 4.1:-74132790 None:intergenic
TACGGCTAGGGTTAGCATTG+AGG 0.580836 4.1:+74137239 MS.gene99043:CDS
TTTGGAGCTAGTGCTCCTGC+AGG 0.584179 4.1:+74137327 MS.gene99043:CDS
AGGTATTGTATATTGGGTGA+TGG 0.586628 4.1:+74135157 MS.gene99043:intron
AGTGTGCATGGAAGTGCACT+TGG 0.588131 4.1:+74135991 MS.gene99043:CDS
CCCTAGCCGTAACAGCAGTA+GGG 0.588657 4.1:-74137227 None:intergenic
AAGGGCTAAACCAACAGCAT+TGG 0.589425 4.1:-74134978 None:intergenic
ATGTGAGGCGCGTGAGATTG+GGG 0.593576 4.1:-74132670 None:intergenic
GGTTGACGGTGGTGCTGAGA+CGG 0.597066 4.1:-74132813 None:intergenic
TGGGTAAAGAATGGAAACAC+TGG 0.598152 4.1:+74135352 MS.gene99043:CDS
GACCGGGAAGAACATTCGCA+AGG 0.598309 4.1:-74136519 None:intergenic
ACTGATGATAGATTTCAAAA+CGG 0.601423 4.1:-74136273 None:intergenic
ACTCACGATTCAATAGGACT+TGG 0.606593 4.1:+74136802 MS.gene99043:CDS
GTGGTGCTGAGACGGATGCA+TGG 0.608888 4.1:-74132805 None:intergenic
CCACAAGAAACAATCTTGGA+TGG 0.609450 4.1:+74136031 MS.gene99043:CDS
GGTGATGGTTGTCAAATGGA+GGG 0.610444 4.1:+74135172 MS.gene99043:CDS
TGGAGTCGCCACATCCGTGA+GGG 0.615343 4.1:+74136182 MS.gene99043:CDS
AGGCCGGATCAACATTCGGG+TGG 0.615366 4.1:+74137259 MS.gene99043:CDS
AATGGCACCACGCATGTAGT+CGG 0.615519 4.1:-74136737 None:intergenic
CAGACAAAACAAACCGATCA+CGG 0.616101 4.1:-74133012 None:intergenic
TGAGCCTTTCCACGTGCCCG+AGG 0.617304 4.1:+74136059 MS.gene99043:CDS
CACAGTATGGAATAAGTCCA+CGG 0.620236 4.1:-74136696 None:intergenic
ATTCAAGAGCAGCACCCTCA+CGG 0.624321 4.1:-74136196 None:intergenic
GCTAGGGTTAGCATTGAGGC+CGG 0.626913 4.1:+74137243 MS.gene99043:CDS
ACCGGGAAGAACATTCGCAA+GGG 0.627406 4.1:-74136518 None:intergenic
CGGATGCATGGATGGCGGTG+TGG 0.628503 4.1:-74132793 None:intergenic
TTGGCAATGCCCTGACCAAG+AGG 0.629391 4.1:-74134959 None:intergenic
GAGGCGCGTGAGATTGGGGT+TGG 0.629937 4.1:-74132666 None:intergenic
GCACAACCCATAGGTAAACC+AGG 0.634013 4.1:-74132923 None:intergenic
CGATTCAATAGGACTTGGAG+AGG 0.636047 4.1:+74136807 MS.gene99043:CDS
GGATCTAAGAAAAGAAGGAA+AGG 0.637691 4.1:+74137131 MS.gene99043:CDS
TGAATATGAAAAGAAGTACA+AGG 0.638110 4.1:+74136241 MS.gene99043:CDS
GGCCGGATCAACATTCGGGT+GGG 0.638758 4.1:+74137260 MS.gene99043:CDS
GGTTTCGGGTTGCATCGGCA+GGG 0.640091 4.1:-74136474 None:intergenic
AGCTGGGGCATACAAAGTTG+CGG 0.643142 4.1:+74136921 MS.gene99043:CDS
TTGGAGTCGCCACATCCGTG+AGG 0.643540 4.1:+74136181 MS.gene99043:CDS
GTGCTGCTCTTGAATCTGAG+TGG 0.643988 4.1:+74136204 MS.gene99043:CDS
CCCATTGGAGCACAACCCAT+AGG 0.646724 4.1:-74132932 None:intergenic
GGAATGGGAGCAATCAGCAA+TGG 0.647795 4.1:+74136658 MS.gene99043:CDS
AACACCGGCTTCGGATAGGG+CGG 0.647980 4.1:-74136767 None:intergenic
AATTGCATACAAAGCTGGTG+AGG 0.649789 4.1:+74137110 MS.gene99043:CDS
TGCTCACTTGCAGGACACTG+GGG 0.650590 4.1:+74135211 MS.gene99043:CDS
CTTCAATAGAAGTTCCGGCA+AGG 0.650965 4.1:-74136999 None:intergenic
GAGAGAAGAGAGGCGCGTGG+TGG 0.652623 4.1:-74132702 None:intergenic
AAAATTCTCAGGGTGTCCAG+GGG 0.654764 4.1:-74134738 None:intergenic
TTTCGTTACCATCAGCGGGG+CGG 0.659491 4.1:-74136897 None:intergenic
TGGTGGATGGGAGAGAAGAG+AGG 0.660150 4.1:-74132712 None:intergenic
TGGGAGAGAAGAGAGGCGCG+TGG 0.663504 4.1:-74132705 None:intergenic
CTCAACGAGAGATGAGTCTG+TGG 0.664640 4.1:-74132837 None:intergenic
TTTCAACCGAATCAACCGCA+AGG 0.664664 4.1:-74132883 None:intergenic
GGGTCATGTGCTTTATGATG+AGG 0.665011 4.1:+74132952 MS.gene99043:CDS
TGCACTTCCATGCACACTGT+AGG 0.666970 4.1:-74135986 None:intergenic
TGATGGTAACGAAACAGCTG+GGG 0.671680 4.1:+74136906 MS.gene99043:CDS
AACGAGAGATGAGTCTGTGG+TGG 0.691080 4.1:-74132834 None:intergenic
GAGTCTGTGGTGGTTGACGG+TGG 0.699864 4.1:-74132824 None:intergenic
AGTCATGACATATATAACAC+CGG 0.699940 4.1:-74136782 None:intergenic
TGAGACGGATGCATGGATGG+CGG 0.717394 4.1:-74132798 None:intergenic
CTGTTTCGTTACCATCAGCG+GGG 0.726225 4.1:-74136900 None:intergenic
ATATGAAAAGAAGTACAAGG+AGG 0.782536 4.1:+74136244 MS.gene99043:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TACTAAAACAATATTTATTT+TGG - chr4.1:74135536-74135555 None:intergenic 10.0%
!! TTAAATAAGTCAAGTAATAT+GGG + chr4.1:74134260-74134279 MS.gene99043:intron 15.0%
!! TTTAAATAAGTCAAGTAATA+TGG + chr4.1:74134259-74134278 MS.gene99043:intron 15.0%
!!! TATTTTCTATTTTCATGATT+AGG + chr4.1:74134846-74134865 MS.gene99043:intron 15.0%
!!! TTAAGTTTAAAATTGTACAT+TGG - chr4.1:74134084-74134103 None:intergenic 15.0%
!!! TTTTTAATAATCTTTACATG+TGG + chr4.1:74136357-74136376 MS.gene99043:intron 15.0%
!! ACTAAAATGAAACTCATAAA+AGG - chr4.1:74134819-74134838 None:intergenic 20.0%
!! CATTAATTTAGGAGTAAAAT+TGG - chr4.1:74135603-74135622 None:intergenic 20.0%
!! GTAAGACAAAAAAATTATCT+GGG + chr4.1:74133097-74133116 MS.gene99043:intron 20.0%
!! TTCAGTAAAATAAATCACAT+TGG - chr4.1:74135791-74135810 None:intergenic 20.0%
!!! AATATTTATTTTGGAACTGA+GGG - chr4.1:74135527-74135546 None:intergenic 20.0%
!!! ACTTTTGTGTTTTTTGTTAT+TGG + chr4.1:74133147-74133166 MS.gene99043:intron 20.0%
!!! ATTTTAGATTGAATTTGTGT+CGG + chr4.1:74133651-74133670 MS.gene99043:intron 20.0%
!!! GAAACATTATTTCTTAAAGT+AGG - chr4.1:74134306-74134325 None:intergenic 20.0%
!!! GTTTTTGATCTTTGATTTAT+GGG + chr4.1:74134588-74134607 MS.gene99043:intron 20.0%
!!! TATTTATTTGCCTTTTCTTT+TGG + chr4.1:74134622-74134641 MS.gene99043:intron 20.0%
!!! TGTTTTTGATCTTTGATTTA+TGG + chr4.1:74134587-74134606 MS.gene99043:intron 20.0%
!!! TTACAATACTTGTTTTCTAT+AGG + chr4.1:74135137-74135156 MS.gene99043:intron 20.0%
!!! TTCTATAGGTATTGTATATT+GGG + chr4.1:74135151-74135170 MS.gene99043:intron 20.0%
!!! TTTCTATAGGTATTGTATAT+TGG + chr4.1:74135150-74135169 MS.gene99043:intron 20.0%
!!! TTTGTTTTGGTTTGAATTTT+AGG + chr4.1:74134676-74134695 MS.gene99043:intron 20.0%
!!! TTTTTGCTGTTTTAGTTTTT+TGG + chr4.1:74133178-74133197 MS.gene99043:intron 20.0%
! AAGTTTCATATTAATCAGTG+TGG - chr4.1:74136132-74136151 None:intergenic 25.0%
! AATAAGAAGTGAGAAAAACA+AGG - chr4.1:74133812-74133831 None:intergenic 25.0%
! ACAAAAAAATTATCTGGGTT+GGG + chr4.1:74133102-74133121 MS.gene99043:intron 25.0%
! ACTGATGATAGATTTCAAAA+CGG - chr4.1:74136276-74136295 None:intergenic 25.0%
! GGTAAGACAAAAAAATTATC+TGG + chr4.1:74133096-74133115 MS.gene99043:intron 25.0%
! TTCTTATTGGTCAAAAACAA+TGG + chr4.1:74133824-74133843 MS.gene99043:intron 25.0%
! TTTCATCTTCTCGAAAATAA+TGG + chr4.1:74135092-74135111 MS.gene99043:intron 25.0%
! TTTGTATGCAATTTCCAATT+CGG - chr4.1:74137103-74137122 None:intergenic 25.0%
! TTTGTTTCATGTAGTCTATT+TGG + chr4.1:74134890-74134909 MS.gene99043:intron 25.0%
!! AAATAATGTTTCTGTTGTTG+TGG + chr4.1:74134314-74134333 MS.gene99043:intron 25.0%
!! AACAAGTATTGTAAGCAAAA+CGG - chr4.1:74135131-74135150 None:intergenic 25.0%
!! AATAATGTTTCTGTTGTTGT+GGG + chr4.1:74134315-74134334 MS.gene99043:intron 25.0%
!! TATGAAAAGAGTGTAGTATT+AGG + chr4.1:74134557-74134576 MS.gene99043:intron 25.0%
!! TGAATATGAAAAGAAGTACA+AGG + chr4.1:74136241-74136260 MS.gene99043:CDS 25.0%
!! TTACTCTTTTTAACACTCAA+TGG + chr4.1:74134456-74134475 MS.gene99043:intron 25.0%
!! TTTTAGATTGAATTTGTGTC+GGG + chr4.1:74133652-74133671 MS.gene99043:intron 25.0%
!!! CAATATTTATTTTGGAACTG+AGG - chr4.1:74135528-74135547 None:intergenic 25.0%
!!! GAAGTGTTGTTATTTTGTTT+TGG + chr4.1:74134663-74134682 MS.gene99043:intron 25.0%
!!! TGATCAAGGTTAGTTTTAAA+CGG + chr4.1:74135434-74135453 MS.gene99043:intron 25.0%
!!! TTATTTTCGAGAAGATGAAA+AGG - chr4.1:74135092-74135111 None:intergenic 25.0%
!!! TTGTTTTTCTCACTTCTTAT+TGG + chr4.1:74133811-74133830 MS.gene99043:intron 25.0%
!!! TTTTTTTGGAATTTACTCAC+CGG - chr4.1:74136332-74136351 None:intergenic 25.0%
AAAAAGTTCCCAAGAAACAA+AGG - chr4.1:74137172-74137191 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr4.1:74133837-74133856 MS.gene99043:intron 30.0%
AAAACTAACCTTGATCAATG+TGG - chr4.1:74135431-74135450 None:intergenic 30.0%
AAAAGGAGAAATACAAGAGT+TGG - chr4.1:74135075-74135094 None:intergenic 30.0%
AAACTAACCTTGATCAATGT+GGG - chr4.1:74135430-74135449 None:intergenic 30.0%
AAGAAGTAAACTTGATCAGA+CGG - chr4.1:74133481-74133500 None:intergenic 30.0%
AATAACAACACTTCAGTCTA+TGG - chr4.1:74134657-74134676 None:intergenic 30.0%
AGTCATGACATATATAACAC+CGG - chr4.1:74136785-74136804 None:intergenic 30.0%
ATAAGTCAAGTAATATGGGA+CGG + chr4.1:74134264-74134283 MS.gene99043:intron 30.0%
ATGATTAGGACATTATGACT+TGG + chr4.1:74134860-74134879 MS.gene99043:intron 30.0%
CATCAGATTCTTGATCAATT+TGG - chr4.1:74136395-74136414 None:intergenic 30.0%
GACAAAAAAATTATCTGGGT+TGG + chr4.1:74133101-74133120 MS.gene99043:intron 30.0%
GACAATCACATTTCTATTGA+CGG + chr4.1:74135262-74135281 MS.gene99043:CDS 30.0%
GACATGTATATATGTTGTGT+GGG - chr4.1:74133258-74133277 None:intergenic 30.0%
GGAACAATATACAAAGAGTT+TGG + chr4.1:74137348-74137367 MS.gene99043:CDS 30.0%
GTATAATCACATCAACATGT+TGG - chr4.1:74135503-74135522 None:intergenic 30.0%
GTTAACAAGTCCAAAAGAAA+AGG - chr4.1:74134635-74134654 None:intergenic 30.0%
TCAACAAAGTTGTCATCAAA+TGG - chr4.1:74133786-74133805 None:intergenic 30.0%
TCAACTAGGTCAAGTAATAT+GGG - chr4.1:74134047-74134066 None:intergenic 30.0%
TCTATTGAAGGAGTTGAAAA+GGG + chr4.1:74137012-74137031 MS.gene99043:CDS 30.0%
TGACATGTATATATGTTGTG+TGG - chr4.1:74133259-74133278 None:intergenic 30.0%
TTCTATTGAAGGAGTTGAAA+AGG + chr4.1:74137011-74137030 MS.gene99043:CDS 30.0%
TTTAATTAAGTGCAGTCTGT+TGG + chr4.1:74135893-74135912 MS.gene99043:intron 30.0%
! AATATTGACCTTTTAAGCGA+TGG + chr4.1:74134521-74134540 MS.gene99043:intron 30.0%
! AGGCAATTTTTGTCTAGAAA+GGG - chr4.1:74136977-74136996 None:intergenic 30.0%
! AGTCTGAAATCAAATTGGAA+CGG - chr4.1:74136440-74136459 None:intergenic 30.0%
! AGTTGTTTCCTTTGTTTCTT+GGG + chr4.1:74137161-74137180 MS.gene99043:CDS 30.0%
! ATAATCCAAAGAATCCGTTT+TGG + chr4.1:74132984-74133003 MS.gene99043:CDS 30.0%
! ATATGAAAAGAAGTACAAGG+AGG + chr4.1:74136244-74136263 MS.gene99043:CDS 30.0%
! ATCTTTGATTTATGGGAACT+TGG + chr4.1:74134595-74134614 MS.gene99043:intron 30.0%
! ATTTGAAGCAATTTCGTCAA+TGG + chr4.1:74134705-74134724 MS.gene99043:CDS 30.0%
! CATGTTATTTGGGTAAAGAA+TGG + chr4.1:74135343-74135362 MS.gene99043:CDS 30.0%
! CCAAAAAAAAGTGCAGTTTA+AGG - chr4.1:74135742-74135761 None:intergenic 30.0%
! CTTTTCATATTCAGCAAACT+TGG - chr4.1:74136234-74136253 None:intergenic 30.0%
! GTGTAAGTCTGAAATCAAAT+TGG - chr4.1:74136445-74136464 None:intergenic 30.0%
! TAGGCAATTTTTGTCTAGAA+AGG - chr4.1:74136978-74136997 None:intergenic 30.0%
! TCTTTGATTTATGGGAACTT+GGG + chr4.1:74134596-74134615 MS.gene99043:intron 30.0%
! TCTTTTCTTGCAAATTTTCC+AGG + chr4.1:74134935-74134954 MS.gene99043:intron 30.0%
! TGGTGTCTGTGTTTTATATT+TGG + chr4.1:74133988-74134007 MS.gene99043:intron 30.0%
! TTAAACCAAAACGGATTCTT+TGG - chr4.1:74132992-74133011 None:intergenic 30.0%
! TTCACAACAACTATTGGTTA+TGG + chr4.1:74135943-74135962 MS.gene99043:CDS 30.0%
! TTTGAAGCAATTTCGTCAAT+GGG + chr4.1:74134706-74134725 MS.gene99043:CDS 30.0%
!! ACTAGTTTCATTGTTTTGTC+TGG + chr4.1:74133968-74133987 MS.gene99043:intron 30.0%
!! AGTGTTGAAAAACGTTTTGA+GGG + chr4.1:74135310-74135329 MS.gene99043:CDS 30.0%
!!! AAACCTGATGTCATTTTGAT+CGG + chr4.1:74137069-74137088 MS.gene99043:CDS 30.0%
!!! AACCACTTTTTGACAACTTT+TGG - chr4.1:74133909-74133928 None:intergenic 30.0%
!!! AGAATTGCTTTTTTGTTTGC+AGG + chr4.1:74136156-74136175 MS.gene99043:intron 30.0%
!!! CCTTAAACTGCACTTTTTTT+TGG + chr4.1:74135739-74135758 MS.gene99043:intron 30.0%
!!! GTTTTGAAATCTATCATCAG+TGG + chr4.1:74136275-74136294 MS.gene99043:CDS 30.0%
AACTCCTTCAATAGAAGTTC+CGG - chr4.1:74137007-74137026 None:intergenic 35.0%
ACAAAAAAGGTTGCACAGTA+TGG - chr4.1:74136712-74136731 None:intergenic 35.0%
ACAGAACTCAAGAATATGCA+AGG - chr4.1:74134365-74134384 None:intergenic 35.0%
ACTGACACATGTATTTGCAT+AGG + chr4.1:74133725-74133744 MS.gene99043:intron 35.0%
ATGACCTTGCTGAAAAAGTT+TGG + chr4.1:74136577-74136596 MS.gene99043:CDS 35.0%
ATTCACTTGCCATACATAGT+GGG - chr4.1:74135655-74135674 None:intergenic 35.0%
CAGGAGTTTCAAAATTCTCA+GGG - chr4.1:74134751-74134770 None:intergenic 35.0%
CTATGTATGGCAAGTGAATA+AGG + chr4.1:74135656-74135675 MS.gene99043:intron 35.0%
CTGCACTTAATTAAACTGCT+AGG - chr4.1:74135888-74135907 None:intergenic 35.0%
CTGTAGGAGTTGGATTTATT+CGG - chr4.1:74135973-74135992 None:intergenic 35.0%
GACGCACACATCATTAATTT+AGG - chr4.1:74135614-74135633 None:intergenic 35.0%
GAGAAAATTGTTGGAAGCAA+AGG + chr4.1:74137282-74137301 MS.gene99043:CDS 35.0%
GATACAAACTGACACAAACA+TGG - chr4.1:74133342-74133361 None:intergenic 35.0%
GGATCTAAGAAAAGAAGGAA+AGG + chr4.1:74137131-74137150 MS.gene99043:CDS 35.0%
GTAGTCGGTGAAAACAAAAA+AGG - chr4.1:74136725-74136744 None:intergenic 35.0%
GTCAACTAGGTCAAGTAATA+TGG - chr4.1:74134048-74134067 None:intergenic 35.0%
GTCCAAAAGTTGTCAAAAAG+TGG + chr4.1:74133904-74133923 MS.gene99043:intron 35.0%
GTGATTTGATGTGACTGTTT+GGG + chr4.1:74133399-74133418 MS.gene99043:intron 35.0%
TATGAATCGTCCAATCTTGA+CGG + chr4.1:74133530-74133549 MS.gene99043:intron 35.0%
TATTCACTTGCCATACATAG+TGG - chr4.1:74135656-74135675 None:intergenic 35.0%
TCACTATATCCCACTATGTA+TGG + chr4.1:74135643-74135662 MS.gene99043:intron 35.0%
TCTTTGTATATTGTTCCTGC+AGG - chr4.1:74137345-74137364 None:intergenic 35.0%
TGAACAATCACAAGCTTACA+AGG + chr4.1:74137194-74137213 MS.gene99043:CDS 35.0%
TGTGATTTGATGTGACTGTT+TGG + chr4.1:74133398-74133417 MS.gene99043:intron 35.0%
TTCGGTTGAAAAAGCCAATT+CGG + chr4.1:74132895-74132914 MS.gene99043:CDS 35.0%
TTGGAAATTGCATACAAAGC+TGG + chr4.1:74137105-74137124 MS.gene99043:CDS 35.0%
TTTCTGTTGTTGTGGGTAAT+GGG + chr4.1:74134322-74134341 MS.gene99043:intron 35.0%
! ACAACAGGTTGGATACAATT+TGG + chr4.1:74134782-74134801 MS.gene99043:intron 35.0%
! AGGTATTGTATATTGGGTGA+TGG + chr4.1:74135157-74135176 MS.gene99043:intron 35.0%
! ATTTTTGTCTAGAAAGGGCA+AGG - chr4.1:74136972-74136991 None:intergenic 35.0%
! GAGTTGTTTCCTTTGTTTCT+TGG + chr4.1:74137160-74137179 MS.gene99043:CDS 35.0%
!! AGATTTGGTGTTAGAGAACA+TGG + chr4.1:74136637-74136656 MS.gene99043:CDS 35.0%
!! TATTTAGCTTTCAGCTTCTC+AGG - chr4.1:74135830-74135849 None:intergenic 35.0%
!! TCCATACTTTTTGACATCCT+CGG - chr4.1:74136079-74136098 None:intergenic 35.0%
!!! AAAAACGTTTTGAGGGACTT+GGG + chr4.1:74135317-74135336 MS.gene99043:CDS 35.0%
!!! ATCACCAAACTTTTTCAGCA+AGG - chr4.1:74136584-74136603 None:intergenic 35.0%
!!! CTTTTTCAGCAAGGTCATAT+TGG - chr4.1:74136575-74136594 None:intergenic 35.0%
!!! GAGTGTTGAAAAACGTTTTG+AGG + chr4.1:74135309-74135328 MS.gene99043:CDS 35.0%
!!! GCACTTTTTTTTGGAACTGA+GGG + chr4.1:74135748-74135767 MS.gene99043:intron 35.0%
!!! TGCACTTTTTTTTGGAACTG+AGG + chr4.1:74135747-74135766 MS.gene99043:intron 35.0%
AAGCACTAATGACACGAACA+TGG - chr4.1:74133371-74133390 None:intergenic 40.0%
AATTGCATACAAAGCTGGTG+AGG + chr4.1:74137110-74137129 MS.gene99043:CDS 40.0%
ACTCACGATTCAATAGGACT+TGG + chr4.1:74136802-74136821 MS.gene99043:CDS 40.0%
AGAGAGAAAAAGGAAGAGAG+AGG + chr4.1:74133847-74133866 MS.gene99043:intron 40.0%
AGCAAAACGGAAGACAACTA+AGG - chr4.1:74135118-74135137 None:intergenic 40.0%
AGTTGTTGTGAACTGCGAAA+TGG - chr4.1:74135935-74135954 None:intergenic 40.0%
ATGATCGACGATCTCATTGT+CGG - chr4.1:74135038-74135057 None:intergenic 40.0%
ATTGAAGGAGTTGAAAAGGG+TGG + chr4.1:74137015-74137034 MS.gene99043:CDS 40.0%
CAAAAATTGCCTAACCTTGC+CGG + chr4.1:74136985-74137004 MS.gene99043:CDS 40.0%
CACAGTATGGAATAAGTCCA+CGG - chr4.1:74136699-74136718 None:intergenic 40.0%
CAGACAAAACAAACCGATCA+CGG - chr4.1:74133015-74133034 None:intergenic 40.0%
CCACAAGAAACAATCTTGGA+TGG + chr4.1:74136031-74136050 MS.gene99043:CDS 40.0%
CCAGGAGTTTCAAAATTCTC+AGG - chr4.1:74134752-74134771 None:intergenic 40.0%
CGATCACGGTTAAACCAAAA+CGG - chr4.1:74133001-74133020 None:intergenic 40.0%
CTAGGTCAAGTAATATGGGA+CGG - chr4.1:74134043-74134062 None:intergenic 40.0%
GAATTGAAGTCACAACAGGT+TGG + chr4.1:74134771-74134790 MS.gene99043:intron 40.0%
GATGCCACAAGAAACAATCT+TGG + chr4.1:74136027-74136046 MS.gene99043:CDS 40.0%
GGAAGCAAAGGAAAAGCAAT+CGG + chr4.1:74137294-74137313 MS.gene99043:CDS 40.0%
GGTGAGGATCTAAGAAAAGA+AGG + chr4.1:74137126-74137145 MS.gene99043:CDS 40.0%
GGTGTTAGAGAACATGGAAT+GGG + chr4.1:74136643-74136662 MS.gene99043:CDS 40.0%
GTCAAAGTGATCAGGCATTT+GGG + chr4.1:74133445-74133464 MS.gene99043:intron 40.0%
GTCATGACTCACGATTCAAT+AGG + chr4.1:74136796-74136815 MS.gene99043:CDS 40.0%
GTTCCGATCAAAATGACATC+AGG - chr4.1:74137075-74137094 None:intergenic 40.0%
GTTTCTGTTGTTGTGGGTAA+TGG + chr4.1:74134321-74134340 MS.gene99043:intron 40.0%
TATGCTTTGCTTCATCTTGC+TGG + chr4.1:74133058-74133077 MS.gene99043:CDS 40.0%
TCAAGATATTTGGCATTGCC+CGG - chr4.1:74136873-74136892 None:intergenic 40.0%
TCATAAAGCACATGACCCAT+TGG - chr4.1:74132950-74132969 None:intergenic 40.0%
TCGCAGTTCACAACAACTAT+TGG + chr4.1:74135937-74135956 MS.gene99043:intron 40.0%
TCGGTTGAAAAAGCCAATTC+GGG + chr4.1:74132896-74132915 MS.gene99043:CDS 40.0%
TCTTCACTGTCAAAGTGATC+AGG + chr4.1:74133437-74133456 MS.gene99043:intron 40.0%
TCTTGTGGCATCAACTTCTT+TGG - chr4.1:74136019-74136038 None:intergenic 40.0%
TGAAATTCGTGCTGCCATTA+AGG + chr4.1:74135381-74135400 MS.gene99043:CDS 40.0%
TGCAATTTCCAATTCGGAAC+CGG - chr4.1:74137097-74137116 None:intergenic 40.0%
TGGGTAAAGAATGGAAACAC+TGG + chr4.1:74135352-74135371 MS.gene99043:CDS 40.0%
TGTCAAAGTGATCAGGCATT+TGG + chr4.1:74133444-74133463 MS.gene99043:intron 40.0%
! ACCTTTTAAGCGATGGTTAG+TGG + chr4.1:74134528-74134547 MS.gene99043:intron 40.0%
! ACTGTTTGGGTTTAGGAGAT+TGG + chr4.1:74133412-74133431 MS.gene99043:intron 40.0%
! ACTTGGGTGGCATGTTATTT+GGG + chr4.1:74135333-74135352 MS.gene99043:CDS 40.0%
! ATTGGGTGATGGTTGTCAAA+TGG + chr4.1:74135168-74135187 MS.gene99043:CDS 40.0%
! CATTAAGGTTTTGCTGCGAT+AGG - chr4.1:74136498-74136517 None:intergenic 40.0%
! CCATCCAAGATTGTTTCTTG+TGG - chr4.1:74136034-74136053 None:intergenic 40.0%
! CCTTTTAAGCGATGGTTAGT+GGG + chr4.1:74134529-74134548 MS.gene99043:intron 40.0%
! GACAGCTTTTGCTTCCTTAA+TGG - chr4.1:74135398-74135417 None:intergenic 40.0%
! TCGTGTCATTAGTGCTTCAT+AGG + chr4.1:74133374-74133393 MS.gene99043:intron 40.0%
! TGATGTGACTGTTTGGGTTT+AGG + chr4.1:74133405-74133424 MS.gene99043:intron 40.0%
! TGGTGTTAGAGAACATGGAA+TGG + chr4.1:74136642-74136661 MS.gene99043:CDS 40.0%
!! AAAAGGTGTCTATGTCGTCT+TGG - chr4.1:74133696-74133715 None:intergenic 40.0%
!! ATTGTCGGGCTTGTTAAATC+TGG - chr4.1:74135023-74135042 None:intergenic 40.0%
!! CCATACTTTTTGACATCCTC+GGG - chr4.1:74136078-74136097 None:intergenic 40.0%
!! GACATATATAACACCGGCTT+CGG - chr4.1:74136779-74136798 None:intergenic 40.0%
!!! CCTGAGAATTTTGAAACTCC+TGG + chr4.1:74134749-74134768 MS.gene99043:CDS 40.0%
!!! CGTTTTGGTTTAACCGTGAT+CGG + chr4.1:74132999-74133018 MS.gene99043:CDS 40.0%
!!! GAAAAACGTTTTGAGGGACT+TGG + chr4.1:74135316-74135335 MS.gene99043:CDS 40.0%
!!! GATGTCATTTTGATCGGAAC+CGG + chr4.1:74137075-74137094 MS.gene99043:CDS 40.0%
!!! GCTTTTTTGTTTGCAGGCAT+TGG + chr4.1:74136162-74136181 MS.gene99043:intron 40.0%
!!! TTTGTTTTGTCTGCTGGTCA+TGG + chr4.1:74133022-74133041 MS.gene99043:CDS 40.0%
AAGGGCTAAACCAACAGCAT+TGG - chr4.1:74134981-74135000 None:intergenic 45.0%
AATGTTCTTCCCGGTCTGAT+TGG + chr4.1:74136526-74136545 MS.gene99043:CDS 45.0%
ACAAAGTTGCGGTGCTTAAC+AGG + chr4.1:74136932-74136951 MS.gene99043:CDS 45.0%
ACGGCTACTAATGTCACGAA+AGG + chr4.1:74133554-74133573 MS.gene99043:intron 45.0%
ACTACCAGAACCCAAAGATC+AGG - chr4.1:74133602-74133621 None:intergenic 45.0%
ACTCTCAGTGAACGCGATTT+CGG - chr4.1:74135293-74135312 None:intergenic 45.0%
AGACAGACCCACATTGATCA+AGG + chr4.1:74135420-74135439 MS.gene99043:CDS 45.0%
AGCTAAGTGCTTCTCTGCAA+GGG - chr4.1:74134999-74135018 None:intergenic 45.0%
AGTCAAGTAATATGGGACGG+AGG + chr4.1:74134267-74134286 MS.gene99043:intron 45.0%
ATAGAAGTTCCGGCAAGGTT+AGG - chr4.1:74136997-74137016 None:intergenic 45.0%
ATCGTCCAATCTTGACGGAA+CGG + chr4.1:74133535-74133554 MS.gene99043:intron 45.0%
ATCGTCTCTGACAACTCAAC+AGG + chr4.1:74137042-74137061 MS.gene99043:CDS 45.0%
ATTGAGGCCGGATCAACATT+CGG + chr4.1:74137255-74137274 MS.gene99043:CDS 45.0%
CATACGTGACAGAGTCAACT+AGG - chr4.1:74134061-74134080 None:intergenic 45.0%
CCCACTAACCATCGCTTAAA+AGG - chr4.1:74134532-74134551 None:intergenic 45.0%
CCCGAGGATGTCAAAAAGTA+TGG + chr4.1:74136075-74136094 MS.gene99043:intron 45.0%
CCTGGAATTGAAGTCACAAC+AGG + chr4.1:74134767-74134786 MS.gene99043:CDS 45.0%
CCTGTTGTGACTTCAATTCC+AGG - chr4.1:74134770-74134789 None:intergenic 45.0%
CGATTCAATAGGACTTGGAG+AGG + chr4.1:74136807-74136826 MS.gene99043:CDS 45.0%
CTAGAAAGGGCAAGGATAGA+GGG - chr4.1:74136964-74136983 None:intergenic 45.0%
CTTCAATAGAAGTTCCGGCA+AGG - chr4.1:74137002-74137021 None:intergenic 45.0%
CTTGCCGGAACTTCTATTGA+AGG + chr4.1:74137000-74137019 MS.gene99043:CDS 45.0%
GACTTGGGTGGCATGTTATT+TGG + chr4.1:74135332-74135351 MS.gene99043:CDS 45.0%
GGGTCATGTGCTTTATGATG+AGG + chr4.1:74132952-74132971 MS.gene99043:CDS 45.0%
GGTCATCCTGGTTTACCTAT+GGG + chr4.1:74132917-74132936 MS.gene99043:CDS 45.0%
GTCAAGTAATATGGGACGGA+GGG + chr4.1:74134268-74134287 MS.gene99043:intron 45.0%
GTCAAGTAATATGGGACGGA+GGG - chr4.1:74134287-74134268 None:intergenic 45.0%
GTGTCGGGTATGACACATAT+TGG + chr4.1:74133667-74133686 MS.gene99043:intron 45.0%
TAAACCAGGATGACCCGAAT+TGG - chr4.1:74132912-74132931 None:intergenic 45.0%
TCAATAGGACTTGGAGAGGA+TGG + chr4.1:74136811-74136830 MS.gene99043:CDS 45.0%
TCTAGAAAGGGCAAGGATAG+AGG - chr4.1:74136965-74136984 None:intergenic 45.0%
TGATCGACGATCTCATTGTC+GGG - chr4.1:74135037-74135056 None:intergenic 45.0%
TGCTGGATATGACAGTGTTC+AGG + chr4.1:74133075-74133094 MS.gene99043:CDS 45.0%
TGTTCTCCCTACTGCTGTTA+CGG + chr4.1:74137221-74137240 MS.gene99043:CDS 45.0%
TTCGGGTGGGAGAAAATTGT+TGG + chr4.1:74137273-74137292 MS.gene99043:CDS 45.0%
TTTCAACCGAATCAACCGCA+AGG - chr4.1:74132886-74132905 None:intergenic 45.0%
! AAAATTCTCAGGGTGTCCAG+GGG - chr4.1:74134741-74134760 None:intergenic 45.0%
! AATGAAGCTTGCTCACTTGC+AGG + chr4.1:74135202-74135221 MS.gene99043:CDS 45.0%
! AGCTGTTTCGTTACCATCAG+CGG - chr4.1:74136905-74136924 None:intergenic 45.0%
! CAAAATTCTCAGGGTGTCCA+GGG - chr4.1:74134742-74134761 None:intergenic 45.0%
! CTGATGGTAACGAAACAGCT+GGG + chr4.1:74136905-74136924 MS.gene99043:CDS 45.0%
! GATCTTTGGGTTCTGGTAGT+GGG + chr4.1:74133602-74133621 MS.gene99043:intron 45.0%
! GCAAATTTTCCAGGTCCTCT+TGG + chr4.1:74134944-74134963 MS.gene99043:intron 45.0%
! GGTGATGGTTGTCAAATGGA+GGG + chr4.1:74135172-74135191 MS.gene99043:CDS 45.0%
! GGTTTTGCTGCGATAGGTTT+CGG - chr4.1:74136492-74136511 None:intergenic 45.0%
! GTGTCAGTGTCGAACACAAA+AGG - chr4.1:74133713-74133732 None:intergenic 45.0%
! GTTTTGCTGCGATAGGTTTC+GGG - chr4.1:74136491-74136510 None:intergenic 45.0%
! TCAAAATTCTCAGGGTGTCC+AGG - chr4.1:74134743-74134762 None:intergenic 45.0%
! TGATCAGGCATTTGGGACAT+TGG + chr4.1:74133452-74133471 MS.gene99043:intron 45.0%
! TGATCTTTGGGTTCTGGTAG+TGG + chr4.1:74133601-74133620 MS.gene99043:intron 45.0%
! TGATGGTAACGAAACAGCTG+GGG + chr4.1:74136906-74136925 MS.gene99043:CDS 45.0%
!! ATATAACACCGGCTTCGGAT+AGG - chr4.1:74136774-74136793 None:intergenic 45.0%
!! GAACATTCGCAAGGGCATTA+AGG - chr4.1:74136513-74136532 None:intergenic 45.0%
!! TATAACACCGGCTTCGGATA+GGG - chr4.1:74136773-74136792 None:intergenic 45.0%
!!! GATCGGTTTGTTTTGTCTGC+TGG + chr4.1:74133016-74133035 MS.gene99043:CDS 45.0%
!!! GCAATCGGCATTGATCGTTT+TGG + chr4.1:74137309-74137328 MS.gene99043:CDS 45.0%
!! AATAAATTAATTTATTTAAC+AGG - chr4.1:74134494-74134513 None:intergenic 5.0%
!!! TATTAAAAAAGATTTTTTTT+TGG - chr4.1:74136346-74136365 None:intergenic 5.0%
AAAGCCAATTCGGGTCATCC+TGG + chr4.1:74132905-74132924 MS.gene99043:CDS 50.0%
AACGAGAGATGAGTCTGTGG+TGG - chr4.1:74132837-74132856 None:intergenic 50.0%
AAGCTTGCCAGGTGCTCTAT+AGG - chr4.1:74136850-74136869 None:intergenic 50.0%
AATGGCACCACGCATGTAGT+CGG - chr4.1:74136740-74136759 None:intergenic 50.0%
ACCAGAACCCAAAGATCAGG+TGG - chr4.1:74133599-74133618 None:intergenic 50.0%
ACCGGGAAGAACATTCGCAA+GGG - chr4.1:74136521-74136540 None:intergenic 50.0%
ACGAAAGGAAGTCTGACTGC+CGG + chr4.1:74133569-74133588 MS.gene99043:intron 50.0%
AGCTGGGGCATACAAAGTTG+CGG + chr4.1:74136921-74136940 MS.gene99043:CDS 50.0%
AGTAGCCGTTCCGTCAAGAT+TGG - chr4.1:74133543-74133562 None:intergenic 50.0%
ATCAGTGGCGATTTACCTGC+TGG + chr4.1:74136290-74136309 MS.gene99043:CDS 50.0%
ATTCAAGAGCAGCACCCTCA+CGG - chr4.1:74136199-74136218 None:intergenic 50.0%
CAACACGATCCGTTTCCTTG+CGG + chr4.1:74132868-74132887 MS.gene99043:CDS 50.0%
CAGCTAAGTGCTTCTCTGCA+AGG - chr4.1:74135000-74135019 None:intergenic 50.0%
CCGAATCAACCGCAAGGAAA+CGG - chr4.1:74132880-74132899 None:intergenic 50.0%
CCGTTTCCTTGCGGTTGATT+CGG + chr4.1:74132877-74132896 MS.gene99043:CDS 50.0%
CTCAACGAGAGATGAGTCTG+TGG - chr4.1:74132840-74132859 None:intergenic 50.0%
CTGTTTCGTTACCATCAGCG+GGG - chr4.1:74136903-74136922 None:intergenic 50.0%
GATGAGTCTGTGGTGGTTGA+CGG - chr4.1:74132830-74132849 None:intergenic 50.0%
GCACAACCCATAGGTAAACC+AGG - chr4.1:74132926-74132945 None:intergenic 50.0%
GCTCTGCTGGAGAATCACTT+TGG - chr4.1:74136609-74136628 None:intergenic 50.0%
GGAATGGGAGCAATCAGCAA+TGG + chr4.1:74136658-74136677 MS.gene99043:CDS 50.0%
GGGTCATCCTGGTTTACCTA+TGG + chr4.1:74132916-74132935 MS.gene99043:CDS 50.0%
GGTCAAGTAATATGGGACGG+AGG - chr4.1:74134040-74134059 None:intergenic 50.0%
TCCAACTCCTACAGTGTGCA+TGG + chr4.1:74135979-74135998 MS.gene99043:CDS 50.0%
TCCATGCACACTGTAGGAGT+TGG - chr4.1:74135983-74136002 None:intergenic 50.0%
TGCACTTCCATGCACACTGT+AGG - chr4.1:74135989-74136008 None:intergenic 50.0%
TTGAGGCCGGATCAACATTC+GGG + chr4.1:74137256-74137275 MS.gene99043:CDS 50.0%
TTGCTCACTTGCAGGACACT+GGG + chr4.1:74135210-74135229 MS.gene99043:CDS 50.0%
TTTCCAGGTCCTCTTGGTCA+GGG + chr4.1:74134950-74134969 MS.gene99043:intron 50.0%
! ACCTATGGGTTGTGCTCCAA+TGG + chr4.1:74132931-74132950 MS.gene99043:CDS 50.0%
! AGTGTGCATGGAAGTGCACT+TGG + chr4.1:74135991-74136010 MS.gene99043:CDS 50.0%
! ATGGTGGGATTGAGAGAGGT+GGG - chr4.1:74132768-74132787 None:intergenic 50.0%
! CCTATGGGTTGTGCTCCAAT+GGG + chr4.1:74132932-74132951 MS.gene99043:CDS 50.0%
! GCTGATGGTAACGAAACAGC+TGG + chr4.1:74136904-74136923 MS.gene99043:CDS 50.0%
! GCTGTTTCGTTACCATCAGC+GGG - chr4.1:74136904-74136923 None:intergenic 50.0%
! GGGCGGAGCATCAAGATATT+TGG - chr4.1:74136883-74136902 None:intergenic 50.0%
! GGGTGATGGTTGTCAAATGG+AGG + chr4.1:74135171-74135190 MS.gene99043:CDS 50.0%
! GTGCTGCTCTTGAATCTGAG+TGG + chr4.1:74136204-74136223 MS.gene99043:CDS 50.0%
! TACGGCTAGGGTTAGCATTG+AGG + chr4.1:74137239-74137258 MS.gene99043:CDS 50.0%
! TGGCGATTTACCTGCTGGTT+GGG + chr4.1:74136295-74136314 MS.gene99043:CDS 50.0%
! TTTTCCAGGTCCTCTTGGTC+AGG + chr4.1:74134949-74134968 MS.gene99043:intron 50.0%
!! ACTACATGCGTGGTGCCATT+AGG + chr4.1:74136740-74136759 MS.gene99043:CDS 50.0%
!! ATTGGGGTTGGTGAGAGAGA+GGG - chr4.1:74132657-74132676 None:intergenic 50.0%
!! CGATAGGTTTCGGGTTGCAT+CGG - chr4.1:74136482-74136501 None:intergenic 50.0%
!! GTTTTCACCGACTACATGCG+TGG + chr4.1:74136730-74136749 MS.gene99043:CDS 50.0%
!! TGGTTGGGAGAAAGCACTTC+CGG + chr4.1:74136310-74136329 MS.gene99043:CDS 50.0%
!!! AACGTTTTGAGGGACTTGGG+TGG + chr4.1:74135320-74135339 MS.gene99043:CDS 50.0%
ACCCTAGCCGTAACAGCAGT+AGG - chr4.1:74137231-74137250 None:intergenic 55.0%
AGTGCTTTCTCCCAACCAGC+AGG - chr4.1:74136308-74136327 None:intergenic 55.0%
ATGTGAGGCGCGTGAGATTG+GGG - chr4.1:74132673-74132692 None:intergenic 55.0%
ATTGAGAGAGGTGGGTGGTG+GGG - chr4.1:74132760-74132779 None:intergenic 55.0%
CAGGTGCTCTATAGGCTGGT+GGG - chr4.1:74136842-74136861 None:intergenic 55.0%
CCAAAGATCAGGTGGCTTCC+CGG - chr4.1:74133591-74133610 None:intergenic 55.0%
CCCATTGGAGCACAACCCAT+AGG - chr4.1:74132935-74132954 None:intergenic 55.0%
CCCTACTGCTGTTACGGCTA+GGG + chr4.1:74137227-74137246 MS.gene99043:CDS 55.0%
CCCTAGCCGTAACAGCAGTA+GGG - chr4.1:74137230-74137249 None:intergenic 55.0%
CGAAAGGAAGTCTGACTGCC+GGG + chr4.1:74133570-74133589 MS.gene99043:intron 55.0%
CGGGAAGCCACCTGATCTTT+GGG + chr4.1:74133589-74133608 MS.gene99043:intron 55.0%
CTCCCACCCGAATGTTGATC+CGG - chr4.1:74137265-74137284 None:intergenic 55.0%
CTTGCTCACTTGCAGGACAC+TGG + chr4.1:74135209-74135228 MS.gene99043:CDS 55.0%
GACCGGGAAGAACATTCGCA+AGG - chr4.1:74136522-74136541 None:intergenic 55.0%
GATGTGAGGCGCGTGAGATT+GGG - chr4.1:74132674-74132693 None:intergenic 55.0%
GATTGAGAGAGGTGGGTGGT+GGG - chr4.1:74132761-74132780 None:intergenic 55.0%
GCCCTTGCGAATGTTCTTCC+CGG + chr4.1:74136517-74136536 MS.gene99043:CDS 55.0%
GGATAGGGCGGAAAGCCTAA+TGG - chr4.1:74136758-74136777 None:intergenic 55.0%
GGCACGTGGAAAGGCTCATA+TGG - chr4.1:74136057-74136076 None:intergenic 55.0%
GTGGCGATTTACCTGCTGGT+TGG + chr4.1:74136294-74136313 MS.gene99043:CDS 55.0%
GTTCTTCCCGGTCTGATTGG+CGG + chr4.1:74136529-74136548 MS.gene99043:CDS 55.0%
TCCCTACTGCTGTTACGGCT+AGG + chr4.1:74137226-74137245 MS.gene99043:CDS 55.0%
TGAGACGGATGCATGGATGG+CGG - chr4.1:74132801-74132820 None:intergenic 55.0%
TGCTCACTTGCAGGACACTG+GGG + chr4.1:74135211-74135230 MS.gene99043:CDS 55.0%
TGCTGAGACGGATGCATGGA+TGG - chr4.1:74132804-74132823 None:intergenic 55.0%
TTGCAGGACACTGGGGACTA+GGG + chr4.1:74135218-74135237 MS.gene99043:CDS 55.0%
TTGCCAGGTGCTCTATAGGC+TGG - chr4.1:74136846-74136865 None:intergenic 55.0%
TTGGCAATGCCCTGACCAAG+AGG - chr4.1:74134962-74134981 None:intergenic 55.0%
TTTCGTTACCATCAGCGGGG+CGG - chr4.1:74136900-74136919 None:intergenic 55.0%
! GATCGGAACCGGTTCCGAAT+TGG + chr4.1:74137086-74137105 MS.gene99043:CDS 55.0%
! GCCACCTGATCTTTGGGTTC+TGG + chr4.1:74133595-74133614 MS.gene99043:intron 55.0%
! GCTAGGGTTAGCATTGAGGC+CGG + chr4.1:74137243-74137262 MS.gene99043:CDS 55.0%
! GTTGGTGAGAGAGAGGGAAG+TGG - chr4.1:74132651-74132670 None:intergenic 55.0%
! TAGAGCACCTGGCAAGCTTC+CGG + chr4.1:74136851-74136870 MS.gene99043:CDS 55.0%
! TGCTCTATAGGCTGGTGGGT+TGG - chr4.1:74136838-74136857 None:intergenic 55.0%
! TGGTGGATGGGAGAGAAGAG+AGG - chr4.1:74132715-74132734 None:intergenic 55.0%
! TTTGGAGCTAGTGCTCCTGC+AGG + chr4.1:74137327-74137346 MS.gene99043:CDS 55.0%
! TTTTGACATCCTCGGGCACG+TGG - chr4.1:74136071-74136090 None:intergenic 55.0%
!! CAGGGCATTGCCAATGCTGT+TGG + chr4.1:74134968-74134987 MS.gene99043:CDS 55.0%
!! GATGGTGGGATTGAGAGAGG+TGG - chr4.1:74132769-74132788 None:intergenic 55.0%
!! GATTGGGGTTGGTGAGAGAG+AGG - chr4.1:74132658-74132677 None:intergenic 55.0%
!! GGAGATGGTGGGATTGAGAG+AGG - chr4.1:74132772-74132791 None:intergenic 55.0%
!! GGTTGAGGGTGATGGTGGAT+GGG - chr4.1:74132727-74132746 None:intergenic 55.0%
ACATCCTCGGGCACGTGGAA+AGG - chr4.1:74136066-74136085 None:intergenic 60.0%
AGGCCGGATCAACATTCGGG+TGG + chr4.1:74137259-74137278 MS.gene99043:CDS 60.0%
ATGCCCTGACCAAGAGGACC+TGG - chr4.1:74134956-74134975 None:intergenic 60.0%
CAATGGGAGAGCAGAACCCC+TGG + chr4.1:74134722-74134741 MS.gene99043:CDS 60.0%
CCAGGTGCTCTATAGGCTGG+TGG - chr4.1:74136843-74136862 None:intergenic 60.0%
CCGGGAAGCCACCTGATCTT+TGG + chr4.1:74133588-74133607 MS.gene99043:intron 60.0%
CTTGCAGGACACTGGGGACT+AGG + chr4.1:74135217-74135236 MS.gene99043:CDS 60.0%
CTTTCCGCCCTATCCGAAGC+CGG + chr4.1:74136763-74136782 MS.gene99043:CDS 60.0%
GAGTCTGTGGTGGTTGACGG+TGG - chr4.1:74132827-74132846 None:intergenic 60.0%
GGATGTGAGGCGCGTGAGAT+TGG - chr4.1:74132675-74132694 None:intergenic 60.0%
GGATTGAGAGAGGTGGGTGG+TGG - chr4.1:74132762-74132781 None:intergenic 60.0%
GGCCGGATCAACATTCGGGT+GGG + chr4.1:74137260-74137279 MS.gene99043:CDS 60.0%
GTGGGATTGAGAGAGGTGGG+TGG - chr4.1:74132765-74132784 None:intergenic 60.0%
TGCACTGCCGCCAATCAGAC+CGG - chr4.1:74136539-74136558 None:intergenic 60.0%
TGGAGTCGCCACATCCGTGA+GGG + chr4.1:74136182-74136201 MS.gene99043:CDS 60.0%
TGGTGTGCGGTTGAGGGTGA+TGG - chr4.1:74132735-74132754 None:intergenic 60.0%
TTGGAGTCGCCACATCCGTG+AGG + chr4.1:74136181-74136200 MS.gene99043:CDS 60.0%
! AGAGCACCTGGCAAGCTTCC+GGG + chr4.1:74136852-74136871 MS.gene99043:CDS 60.0%
! ATGCATGGATGGCGGTGTGG+CGG - chr4.1:74132793-74132812 None:intergenic 60.0%
! CCACCAGCCTATAGAGCACC+TGG + chr4.1:74136840-74136859 MS.gene99043:CDS 60.0%
! GGTTGACGGTGGTGCTGAGA+CGG - chr4.1:74132816-74132835 None:intergenic 60.0%
! GTGGTGCTGAGACGGATGCA+TGG - chr4.1:74132808-74132827 None:intergenic 60.0%
! GTTGCATCGGCAGGGATCTC+TGG - chr4.1:74136469-74136488 None:intergenic 60.0%
! TGGTGGATGGGGAGGATGTG+AGG - chr4.1:74132688-74132707 None:intergenic 60.0%
! TGTGCGGTTGAGGGTGATGG+TGG - chr4.1:74132732-74132751 None:intergenic 60.0%
! TTGAGAGAGGTGGGTGGTGG+GGG - chr4.1:74132759-74132778 None:intergenic 60.0%
!! AACACCGGCTTCGGATAGGG+CGG - chr4.1:74136770-74136789 None:intergenic 60.0%
!! AAGAGAGGCGCGTGGTGGAT+GGG - chr4.1:74132700-74132719 None:intergenic 60.0%
!! AGGTTTCGGGTTGCATCGGC+AGG - chr4.1:74136478-74136497 None:intergenic 60.0%
!! CGGTTGAGGGTGATGGTGGA+TGG - chr4.1:74132728-74132747 None:intergenic 60.0%
!! GGTTTCGGGTTGCATCGGCA+GGG - chr4.1:74136477-74136496 None:intergenic 60.0%
GAGCAGCACCCTCACGGATG+TGG - chr4.1:74136193-74136212 None:intergenic 65.0%
GAGGCGCGTGAGATTGGGGT+TGG - chr4.1:74132669-74132688 None:intergenic 65.0%
GCACTGCCGCCAATCAGACC+GGG - chr4.1:74136538-74136557 None:intergenic 65.0%
GCATTGCCCGGAAGCTTGCC+AGG - chr4.1:74136861-74136880 None:intergenic 65.0%
GGCATCGCTCTTCACAGCCG+TGG + chr4.1:74136679-74136698 MS.gene99043:CDS 65.0%
TGAGCCTTTCCACGTGCCCG+AGG + chr4.1:74136059-74136078 MS.gene99043:CDS 65.0%
TTGATGCTCCGCCCCGCTGA+TGG + chr4.1:74136889-74136908 MS.gene99043:CDS 65.0%
! CGGATGCATGGATGGCGGTG+TGG - chr4.1:74132796-74132815 None:intergenic 65.0%
! GAAGAGAGGCGCGTGGTGGA+TGG - chr4.1:74132701-74132720 None:intergenic 65.0%
! GAGAGAAGAGAGGCGCGTGG+TGG - chr4.1:74132705-74132724 None:intergenic 65.0%
! TGGGAGAGAAGAGAGGCGCG+TGG - chr4.1:74132708-74132727 None:intergenic 65.0%
!! AGAGAGGCGCGTGGTGGATG+GGG - chr4.1:74132699-74132718 None:intergenic 65.0%
!! GGGGGTTGGTGTGCGGTTGA+GGG - chr4.1:74132741-74132760 None:intergenic 65.0%
!! TGGGGGTTGGTGTGCGGTTG+AGG - chr4.1:74132742-74132761 None:intergenic 65.0%
! GGATGGCGGTGTGGCGGAGA+TGG - chr4.1:74132787-74132806 None:intergenic 70.0%
! GGCGGTGTGGCGGAGATGGT+GGG - chr4.1:74132783-74132802 None:intergenic 70.0%
! TGGCGGTGTGGCGGAGATGG+TGG - chr4.1:74132784-74132803 None:intergenic 70.0%
!! GAGAGGTGGGTGGTGGGGGT+TGG - chr4.1:74132755-74132774 None:intergenic 70.0%
!! GGGTGGTGGGGGTTGGTGTG+CGG - chr4.1:74132748-74132767 None:intergenic 70.0%
!! GAGGCGCGTGGTGGATGGGG+AGG - chr4.1:74132696-74132715 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 74132632 74137416 74132632 ID=MS.gene99043
chr4.1 mRNA 74132632 74137416 74132632 ID=MS.gene99043.t1;Parent=MS.gene99043
chr4.1 exon 74132632 74133096 74132632 ID=MS.gene99043.t1.exon1;Parent=MS.gene99043.t1
chr4.1 CDS 74132632 74133096 74132632 ID=cds.MS.gene99043.t1;Parent=MS.gene99043.t1
chr4.1 exon 74134698 74134788 74134698 ID=MS.gene99043.t1.exon2;Parent=MS.gene99043.t1
chr4.1 CDS 74134698 74134788 74134698 ID=cds.MS.gene99043.t1;Parent=MS.gene99043.t1
chr4.1 exon 74134957 74135062 74134957 ID=MS.gene99043.t1.exon3;Parent=MS.gene99043.t1
chr4.1 CDS 74134957 74135062 74134957 ID=cds.MS.gene99043.t1;Parent=MS.gene99043.t1
chr4.1 exon 74135159 74135441 74135159 ID=MS.gene99043.t1.exon4;Parent=MS.gene99043.t1
chr4.1 CDS 74135159 74135441 74135159 ID=cds.MS.gene99043.t1;Parent=MS.gene99043.t1
chr4.1 exon 74135943 74136091 74135943 ID=MS.gene99043.t1.exon5;Parent=MS.gene99043.t1
chr4.1 CDS 74135943 74136091 74135943 ID=cds.MS.gene99043.t1;Parent=MS.gene99043.t1
chr4.1 exon 74136178 74136331 74136178 ID=MS.gene99043.t1.exon6;Parent=MS.gene99043.t1
chr4.1 CDS 74136178 74136331 74136178 ID=cds.MS.gene99043.t1;Parent=MS.gene99043.t1
chr4.1 exon 74136457 74137416 74136457 ID=MS.gene99043.t1.exon7;Parent=MS.gene99043.t1
chr4.1 CDS 74136457 74137416 74136457 ID=cds.MS.gene99043.t1;Parent=MS.gene99043.t1
Gene Sequence

>MS.gene99043

ATGTCTTCATTTTCTTCCACTTCCCTCTCTCTCACCAACCCCAATCTCACGCGCCTCACATCCTCCCCATCCACCACGCGCCTCTCTTCTCTCCCATCCACCATCACCCTCAACCGCACACCAACCCCCACCACCCACCTCTCTCAATCCCACCATCTCCGCCACACCGCCATCCATGCATCCGTCTCAGCACCACCGTCAACCACCACAGACTCATCTCTCGTTGAGAAATCAGTCAACACGATCCGTTTCCTTGCGGTTGATTCGGTTGAAAAAGCCAATTCGGGTCATCCTGGTTTACCTATGGGTTGTGCTCCAATGGGTCATGTGCTTTATGATGAGGTTATGAGATATAATCCAAAGAATCCGTTTTGGTTTAACCGTGATCGGTTTGTTTTGTCTGCTGGTCATGGTTGTATGCTTCAGTATGCTTTGCTTCATCTTGCTGGATATGACAGTGTTCAGGTAAGACAAAAAAATTATCTGGGTTGGGTTGATTTGTTGAAAAGTTTCGAACTTTTGTGTTTTTTGTTATTGGTTTGAGAATTTTTGCTGTTTTAGTTTTTTGGTGTGTTGTGATCTTTCTAGCACTGTCATTTTAGATCAAAAGTGTGTTTCACTGTCCCACACAACATATATACATGTCATTATTTGTAATGACTTTATTTTCTAAGAAGTGTCTGTGTTGTGTTGTATGTATCTGATGTCCATGTTTGTGTCAGTTTGTATCTGATGTCCATGTTCGTGTCATTAGTGCTTCATAGGTTGTGATTTGATGTGACTGTTTGGGTTTAGGAGATTGGATTCTTCACTGTCAAAGTGATCAGGCATTTGGGACATTGGTGACCGTCTGATCAAGTTTACTTCTTATTTTAATTTTTAAAATACTGAATTTGAATATGAATCGTCCAATCTTGACGGAACGGCTACTAATGTCACGAAAGGAAGTCTGACTGCCGGGAAGCCACCTGATCTTTGGGTTCTGGTAGTGGGTATGATGTGATCGATGTAGCGCTGATATTTTAGATTGAATTTGTGTCGGGTATGACACATATTGGTATCCAAGACGACATAGACACCTTTTGTGTTCGACACTGACACATGTATTTGCATAGGATCACTTTATTTTTTGAGTAATGATATTTTGACATCCATTTGATGACAACTTTGTTGACAACCTTGTTTTTCTCACTTCTTATTGGTCAAAAACAATGGAGAGAGAAAAAGGAAGAGAGAGGATAACAACATCATGTGAGTATGAGAGAGAAAGTTGTCCAAAAGTTGTCAAAAAGTGGTTGTCAAAATATCATTTCTCTTCTTTTTTATAATTATTATCACTAGTTTCATTGTTTTGTCTGGTGTCTGTGTTTTATATTTGGTCTGAAGTTTTTGTTATGATCTACTCCCTCCGTCCCATATTACTTGACCTAGTTGACTCTGTCACGTATGCCAATGTACAATTTTAAACTTAAATTTCTTTAATAATCTAGTAGAAAAAATTACGAAAATTTGATATTTTGAAAATATTAATCGAGACGAATCTAACAACATCTTATATGCTATATTTTGTTTTTATATATTAGTAGAAAAATAGAGTCAAAGCATGATACATGAATAGTGCAAATATTTTAAATAAGTCAAGTAATATGGGACGGAGGGAGTAGTAAGTATCCTACTTTAAGAAATAATGTTTCTGTTGTTGTGGGTAATGGGCATGTGAGTGTTTGTTTCCTTGCATATTCTTGAGTTCTGTTTGTTGATGATGAAAGTCGAAACAGTTTTACTGTTGTCTCTTTTTGTTTTTTGAATAAAACTGAAAGCAAATTACTCTTTTTAACACTCAATGGTAAATTTAGATGCCTGTTAAATAAATTAATTTATTAAAAGTGAATATTGACCTTTTAAGCGATGGTTAGTGGGTTAAATATGAAAAGAGTGTAGTATTAGGATTCTTTTGTTTTTGATCTTTGATTTATGGGAACTTGGGAAGTATTTATTTGCCTTTTCTTTTGGACTTGTTAACCATAGACTGAAGTGTTGTTATTTTGTTTTGGTTTGAATTTTAGGTAGAAGATTTGAAGCAATTTCGTCAATGGGAGAGCAGAACCCCTGGACACCCTGAGAATTTTGAAACTCCTGGAATTGAAGTCACAACAGGTTGGATACAATTTGGAGTTTGTATTACCTTTTATGAGTTTCATTTTAGTTTTTATCTATTTTCTATTTTCATGATTAGGACATTATGACTTGGTTTGTACTTTGTTTCATGTAGTCTATTTGGTTGTTGTTGTTTGTTTATTTAATCTTTTCTTGCAAATTTTCCAGGTCCTCTTGGTCAGGGCATTGCCAATGCTGTTGGTTTAGCCCTTGCAGAGAAGCACTTAGCTGCCAGATTTAACAAGCCCGACAATGAGATCGTCGATCATTACACGTAAGATGACCAACTCTTGTATTTCTCCTTTTCATCTTCTCGAAAATAATGGCCTTAGTTGTCTTCCGTTTTGCTTACAATACTTGTTTTCTATAGGTATTGTATATTGGGTGATGGTTGTCAAATGGAGGGAATTGCAAATGAAGCTTGCTCACTTGCAGGACACTGGGGACTAGGGAAGCTAATAGCATTTTACGATGACAATCACATTTCTATTGACGGTGACACCGAAATCGCGTTCACTGAGAGTGTTGAAAAACGTTTTGAGGGACTTGGGTGGCATGTTATTTGGGTAAAGAATGGAAACACTGGCTTTGATGAAATTCGTGCTGCCATTAAGGAAGCAAAAGCTGTCAAAGACAGACCCACATTGATCAAGGTTAGTTTTAAACGGCTAAAATATGATAAGTTTAGCTAAATCTGTCATGCATGTGAAACCAACATGTTGATGTGATTATACTCCCTCAGTTCCAAAATAAATATTGTTTTAGTAAAAAAAAAAAAATAAACAGTTTTTTTTACATGAATTAATTTATTCCAATTTTACTCCTAAATTAATGATGTGTGCGTCACTTTCAAGTCACTATATCCCACTATGTATGGCAAGTGAATAAGGATAGTTTTACGAAATTGTCACATTCATTCATTTATCGCTTTTCTTGATCTATCTAAAAAACCTTAAACTGCACTTTTTTTTGGAACTGAGGGAGTATTAAACAACGCTACCAATGTGATTTATTTTACTGAAAACTGCATTGTGTTCTCCTGAGAAGCTGAAAGCTAAATAGAATTTAGAAATGAATTAAAGTCGCAAATCTTGTGCCTAGCAGTTTAATTAAGTGCAGTCTGTTGGTGTTTGCTGATGTTTACCATTTCGCAGTTCACAACAACTATTGGTTATGGTTCTCCGAATAAATCCAACTCCTACAGTGTGCATGGAAGTGCACTTGGTGCCAAAGAAGTTGATGCCACAAGAAACAATCTTGGATGGCCATATGAGCCTTTCCACGTGCCCGAGGATGTCAAAAAGTATGGATGATGTAGTTACTGATTTCTCGATTTTCTACCACACTGATTAATATGAAACTTATTAAGAATTGCTTTTTTGTTTGCAGGCATTGGAGTCGCCACATCCGTGAGGGTGCTGCTCTTGAATCTGAGTGGAATGCCAAGTTTGCTGAATATGAAAAGAAGTACAAGGAGGAAGCTGCCGTTTTGAAATCTATCATCAGTGGCGATTTACCTGCTGGTTGGGAGAAAGCACTTCCGGTGAGTAAATTCCAAAAAAAAATCTTTTTTAATAATCTTTACATGTGGAGTATGTATCGACCAAATTGATCAAGAATCTGATGTTAACGAGTATCATATTGATCACCGTTCCAATTTGATTTCAGACTTACACTCCAGAGATCCCTGCCGATGCAACCCGAAACCTATCGCAGCAAAACCTTAATGCCCTTGCGAATGTTCTTCCCGGTCTGATTGGCGGCAGTGCAGATCTTGCTTCTTCCAATATGACCTTGCTGAAAAAGTTTGGTGATTTCCAAAGTGATTCTCCAGCAGAGCGTAACGTTAGATTTGGTGTTAGAGAACATGGAATGGGAGCAATCAGCAATGGCATCGCTCTTCACAGCCGTGGACTTATTCCATACTGTGCAACCTTTTTTGTTTTCACCGACTACATGCGTGGTGCCATTAGGCTTTCCGCCCTATCCGAAGCCGGTGTTATATATGTCATGACTCACGATTCAATAGGACTTGGAGAGGATGGACCAACCCACCAGCCTATAGAGCACCTGGCAAGCTTCCGGGCAATGCCAAATATCTTGATGCTCCGCCCCGCTGATGGTAACGAAACAGCTGGGGCATACAAAGTTGCGGTGCTTAACAGGAAGAGACCCTCTATCCTTGCCCTTTCTAGACAAAAATTGCCTAACCTTGCCGGAACTTCTATTGAAGGAGTTGAAAAGGGTGGATACATCGTCTCTGACAACTCAACAGGAAACAAACCTGATGTCATTTTGATCGGAACCGGTTCCGAATTGGAAATTGCATACAAAGCTGGTGAGGATCTAAGAAAAGAAGGAAAGGCTGTTAGAGTTGTTTCCTTTGTTTCTTGGGAACTTTTTGATGAACAATCACAAGCTTACAAGGAGAGTGTTCTCCCTACTGCTGTTACGGCTAGGGTTAGCATTGAGGCCGGATCAACATTCGGGTGGGAGAAAATTGTTGGAAGCAAAGGAAAAGCAATCGGCATTGATCGTTTTGGAGCTAGTGCTCCTGCAGGAACAATATACAAAGAGTTTGGTATCACTAAAGAAGCTGTTATTGCTGCAGCAAAAGAGCTTATTTAG
Protein sequence

>MS.gene99043.t1

MSSFSSTSLSLTNPNLTRLTSSPSTTRLSSLPSTITLNRTPTPTTHLSQSHHLRHTAIHASVSAPPSTTTDSSLVEKSVNTIRFLAVDSVEKANSGHPGLPMGCAPMGHVLYDEVMRYNPKNPFWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVEDLKQFRQWESRTPGHPENFETPGIEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNEIVDHYTYCILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVEKRFEGLGWHVIWVKNGNTGFDEIRAAIKEAKAVKDRPTLIKFTTTIGYGSPNKSNSYSVHGSALGAKEVDATRNNLGWPYEPFHVPEDVKKHWSRHIREGAALESEWNAKFAEYEKKYKEEAAVLKSIISGDLPAGWEKALPTYTPEIPADATRNLSQQNLNALANVLPGLIGGSADLASSNMTLLKKFGDFQSDSPAERNVRFGVREHGMGAISNGIALHSRGLIPYCATFFVFTDYMRGAIRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVLNRKRPSILALSRQKLPNLAGTSIEGVEKGGYIVSDNSTGNKPDVILIGTGSELEIAYKAGEDLRKEGKAVRVVSFVSWELFDEQSQAYKESVLPTAVTARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGTIYKEFGITKEAVIAAAKELI