Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99874.t1 | XP_003601036.2 | 98.8 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 1.30E-185 | 659.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99874.t1 | Q8VZR7 | 70.6 | 327 | 90 | 1 | 1 | 327 | 1 | 321 | 9.7e-134 | 478.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99874.t1 | G7J2Z4 | 98.8 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 9.2e-186 | 659.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049150 | MS.gene99874 | 0.816822 | 4.54E-52 | -1.69E-46 |
MS.gene049153 | MS.gene99874 | 0.814644 | 1.39E-51 | -1.69E-46 |
MS.gene049356 | MS.gene99874 | 0.876086 | 1.85E-68 | -1.69E-46 |
MS.gene049369 | MS.gene99874 | 0.834788 | 2.45E-56 | -1.69E-46 |
MS.gene050122 | MS.gene99874 | 0.801281 | 9.70E-49 | -1.69E-46 |
MS.gene050128 | MS.gene99874 | 0.850062 | 2.16E-60 | -1.69E-46 |
MS.gene050301 | MS.gene99874 | 0.811574 | 6.54E-51 | -1.69E-46 |
MS.gene050670 | MS.gene99874 | 0.830414 | 2.98E-55 | -1.69E-46 |
MS.gene050685 | MS.gene99874 | 0.800562 | 1.36E-48 | -1.69E-46 |
MS.gene050971 | MS.gene99874 | 0.807986 | 3.87E-50 | -1.69E-46 |
MS.gene05105 | MS.gene99874 | 0.803766 | 2.98E-49 | -1.69E-46 |
MS.gene051360 | MS.gene99874 | 0.81549 | 9.00E-52 | -1.69E-46 |
MS.gene052077 | MS.gene99874 | 0.82609 | 3.28E-54 | -1.69E-46 |
MS.gene052188 | MS.gene99874 | 0.870332 | 1.58E-66 | -1.69E-46 |
MS.gene052253 | MS.gene99874 | 0.810413 | 1.17E-50 | -1.69E-46 |
MS.gene052310 | MS.gene99874 | 0.801931 | 7.13E-49 | -1.69E-46 |
MS.gene052340 | MS.gene99874 | 0.852444 | 4.60E-61 | -1.69E-46 |
MS.gene052485 | MS.gene99874 | 0.82301 | 1.74E-53 | -1.69E-46 |
MS.gene053073 | MS.gene99874 | 0.817313 | 3.52E-52 | -1.69E-46 |
MS.gene05316 | MS.gene99874 | 0.875611 | 2.69E-68 | -1.69E-46 |
MS.gene053449 | MS.gene99874 | 0.808216 | 3.45E-50 | -1.69E-46 |
MS.gene053494 | MS.gene99874 | 0.821724 | 3.47E-53 | -1.69E-46 |
MS.gene053758 | MS.gene99874 | 0.802945 | 4.41E-49 | -1.69E-46 |
MS.gene053813 | MS.gene99874 | 0.821587 | 3.73E-53 | -1.69E-46 |
MS.gene053889 | MS.gene99874 | 0.8004 | 1.47E-48 | -1.69E-46 |
MS.gene053928 | MS.gene99874 | 0.827881 | 1.22E-54 | -1.69E-46 |
MS.gene054010 | MS.gene99874 | 0.81097 | 8.85E-51 | -1.69E-46 |
MS.gene054011 | MS.gene99874 | 0.808525 | 2.97E-50 | -1.69E-46 |
MS.gene054012 | MS.gene99874 | 0.80978 | 1.60E-50 | -1.69E-46 |
MS.gene054013 | MS.gene99874 | 0.808505 | 3.00E-50 | -1.69E-46 |
MS.gene054123 | MS.gene99874 | 0.809405 | 1.92E-50 | -1.69E-46 |
MS.gene054183 | MS.gene99874 | 0.83482 | 2.40E-56 | -1.69E-46 |
MS.gene054349 | MS.gene99874 | 0.853248 | 2.71E-61 | -1.69E-46 |
MS.gene054556 | MS.gene99874 | 0.819717 | 1.00E-52 | -1.69E-46 |
MS.gene055116 | MS.gene99874 | 0.845506 | 3.89E-59 | -1.69E-46 |
MS.gene05553 | MS.gene99874 | 0.800335 | 1.51E-48 | -1.69E-46 |
MS.gene055604 | MS.gene99874 | 0.827451 | 1.55E-54 | -1.69E-46 |
MS.gene055666 | MS.gene99874 | 0.806344 | 8.61E-50 | -1.69E-46 |
MS.gene055909 | MS.gene99874 | 0.813174 | 2.92E-51 | -1.69E-46 |
MS.gene055911 | MS.gene99874 | 0.816991 | 4.16E-52 | -1.69E-46 |
MS.gene056407 | MS.gene99874 | 0.821279 | 4.39E-53 | -1.69E-46 |
MS.gene056422 | MS.gene99874 | 0.818348 | 2.05E-52 | -1.69E-46 |
MS.gene056511 | MS.gene99874 | 0.835556 | 1.57E-56 | -1.69E-46 |
MS.gene056659 | MS.gene99874 | 0.833081 | 6.54E-56 | -1.69E-46 |
MS.gene056723 | MS.gene99874 | 0.805028 | 1.63E-49 | -1.69E-46 |
MS.gene056902 | MS.gene99874 | 0.818122 | 2.31E-52 | -1.69E-46 |
MS.gene057396 | MS.gene99874 | 0.855961 | 4.44E-62 | -1.69E-46 |
MS.gene057448 | MS.gene99874 | 0.859639 | 3.60E-63 | -1.69E-46 |
MS.gene057449 | MS.gene99874 | 0.866221 | 3.34E-65 | -1.69E-46 |
MS.gene057450 | MS.gene99874 | 0.855205 | 7.38E-62 | -1.69E-46 |
MS.gene057469 | MS.gene99874 | 0.81161 | 6.42E-51 | -1.69E-46 |
MS.gene057537 | MS.gene99874 | 0.849277 | 3.59E-60 | -1.69E-46 |
MS.gene057610 | MS.gene99874 | 0.827435 | 1.57E-54 | -1.69E-46 |
MS.gene057749 | MS.gene99874 | 0.839225 | 1.80E-57 | -1.69E-46 |
MS.gene057823 | MS.gene99874 | 0.836788 | 7.62E-57 | -1.69E-46 |
MS.gene057824 | MS.gene99874 | 0.808614 | 2.84E-50 | -1.69E-46 |
MS.gene057927 | MS.gene99874 | 0.829186 | 5.93E-55 | -1.69E-46 |
MS.gene058002 | MS.gene99874 | 0.802709 | 4.93E-49 | -1.69E-46 |
MS.gene058007 | MS.gene99874 | 0.815057 | 1.12E-51 | -1.69E-46 |
MS.gene058072 | MS.gene99874 | 0.825452 | 4.65E-54 | -1.69E-46 |
MS.gene058075 | MS.gene99874 | 0.854374 | 1.28E-61 | -1.69E-46 |
MS.gene058365 | MS.gene99874 | 0.820367 | 7.12E-53 | -1.69E-46 |
MS.gene058928 | MS.gene99874 | 0.837397 | 5.33E-57 | -1.69E-46 |
MS.gene058949 | MS.gene99874 | 0.872483 | 3.07E-67 | -1.69E-46 |
MS.gene059011 | MS.gene99874 | 0.811903 | 5.55E-51 | -1.69E-46 |
MS.gene05907 | MS.gene99874 | 0.828022 | 1.13E-54 | -1.69E-46 |
MS.gene059285 | MS.gene99874 | 0.819721 | 1.00E-52 | -1.69E-46 |
MS.gene059294 | MS.gene99874 | 0.823098 | 1.66E-53 | -1.69E-46 |
MS.gene059366 | MS.gene99874 | 0.848255 | 6.88E-60 | -1.69E-46 |
MS.gene059420 | MS.gene99874 | 0.865567 | 5.38E-65 | -1.69E-46 |
MS.gene059462 | MS.gene99874 | 0.804599 | 2.00E-49 | -1.69E-46 |
MS.gene059597 | MS.gene99874 | 0.802056 | 6.72E-49 | -1.69E-46 |
MS.gene059674 | MS.gene99874 | 0.845653 | 3.55E-59 | -1.69E-46 |
MS.gene059676 | MS.gene99874 | 0.819221 | 1.30E-52 | -1.69E-46 |
MS.gene059688 | MS.gene99874 | 0.827055 | 1.93E-54 | -1.69E-46 |
MS.gene059692 | MS.gene99874 | 0.825239 | 5.23E-54 | -1.69E-46 |
MS.gene059695 | MS.gene99874 | 0.817952 | 2.53E-52 | -1.69E-46 |
MS.gene059711 | MS.gene99874 | 0.810771 | 9.77E-51 | -1.69E-46 |
MS.gene059807 | MS.gene99874 | 0.89283 | 1.11E-74 | -1.69E-46 |
MS.gene059876 | MS.gene99874 | 0.864503 | 1.16E-64 | -1.69E-46 |
MS.gene060247 | MS.gene99874 | 0.818885 | 1.55E-52 | -1.69E-46 |
MS.gene060495 | MS.gene99874 | 0.88115 | 3.05E-70 | -1.69E-46 |
MS.gene060496 | MS.gene99874 | 0.809018 | 2.33E-50 | -1.69E-46 |
MS.gene060837 | MS.gene99874 | 0.811127 | 8.18E-51 | -1.69E-46 |
MS.gene060943 | MS.gene99874 | 0.805264 | 1.45E-49 | -1.69E-46 |
MS.gene061049 | MS.gene99874 | 0.834032 | 3.79E-56 | -1.69E-46 |
MS.gene061051 | MS.gene99874 | -0.819642 | 1.04E-52 | -1.69E-46 |
MS.gene061154 | MS.gene99874 | 0.813767 | 2.17E-51 | -1.69E-46 |
MS.gene061159 | MS.gene99874 | 0.813392 | 2.62E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99874.t1 | MTR_3g072300 | 98.777 | 327 | 4 | 0 | 1 | 327 | 1 | 327 | 0.0 | 674 |
MS.gene99874.t1 | MTR_7g098150 | 52.744 | 328 | 146 | 4 | 2 | 324 | 11 | 334 | 2.25e-123 | 365 |
MS.gene99874.t1 | MTR_7g098180 | 53.097 | 339 | 145 | 5 | 4 | 332 | 11 | 345 | 7.77e-122 | 365 |
MS.gene99874.t1 | MTR_7g098090 | 52.744 | 328 | 146 | 4 | 2 | 324 | 11 | 334 | 1.18e-121 | 365 |
MS.gene99874.t1 | MTR_7g098160 | 52.134 | 328 | 148 | 4 | 2 | 324 | 11 | 334 | 4.54e-121 | 363 |
MS.gene99874.t1 | MTR_7g098040 | 53.659 | 328 | 143 | 4 | 2 | 324 | 12 | 335 | 1.18e-120 | 362 |
MS.gene99874.t1 | MTR_1g041815 | 52.454 | 326 | 148 | 3 | 6 | 327 | 9 | 331 | 1.27e-120 | 361 |
MS.gene99874.t1 | MTR_1g041835 | 52.147 | 326 | 149 | 3 | 6 | 327 | 9 | 331 | 5.26e-119 | 357 |
MS.gene99874.t1 | MTR_7g098220 | 53.681 | 326 | 140 | 5 | 5 | 324 | 11 | 331 | 4.89e-118 | 355 |
MS.gene99874.t1 | MTR_1g042310 | 51.964 | 331 | 153 | 3 | 1 | 327 | 3 | 331 | 4.14e-117 | 352 |
MS.gene99874.t1 | MTR_1g075440 | 52.568 | 331 | 147 | 4 | 3 | 327 | 7 | 333 | 1.76e-116 | 351 |
MS.gene99874.t1 | MTR_7g098200 | 51.524 | 328 | 150 | 4 | 2 | 324 | 7 | 330 | 5.77e-115 | 347 |
MS.gene99874.t1 | MTR_7g098200 | 50.915 | 328 | 142 | 5 | 2 | 324 | 7 | 320 | 9.73e-110 | 333 |
MS.gene99874.t1 | MTR_1g041875 | 50.307 | 326 | 156 | 3 | 6 | 327 | 11 | 334 | 1.53e-109 | 333 |
MS.gene99874.t1 | MTR_7g098230 | 51.839 | 299 | 135 | 4 | 31 | 324 | 33 | 327 | 1.58e-100 | 310 |
MS.gene99874.t1 | MTR_1g042310 | 50.508 | 295 | 140 | 3 | 37 | 327 | 2 | 294 | 2.42e-98 | 303 |
MS.gene99874.t1 | MTR_7g067010 | 45.289 | 329 | 174 | 4 | 3 | 327 | 2 | 328 | 1.86e-97 | 301 |
MS.gene99874.t1 | MTR_7g098220 | 52.234 | 291 | 128 | 5 | 40 | 324 | 2 | 287 | 2.01e-97 | 300 |
MS.gene99874.t1 | MTR_1g042310 | 50.173 | 289 | 138 | 3 | 43 | 327 | 1 | 287 | 3.48e-95 | 295 |
MS.gene99874.t1 | MTR_1g041885 | 49.827 | 289 | 139 | 3 | 43 | 327 | 1 | 287 | 1.33e-93 | 290 |
MS.gene99874.t1 | MTR_3g462710 | 43.939 | 330 | 181 | 2 | 1 | 327 | 1 | 329 | 8.71e-91 | 284 |
MS.gene99874.t1 | MTR_4g015080 | 43.465 | 329 | 179 | 4 | 4 | 327 | 12 | 338 | 1.75e-88 | 278 |
MS.gene99874.t1 | MTR_7g065080 | 40.419 | 334 | 189 | 4 | 1 | 327 | 4 | 334 | 8.16e-81 | 258 |
MS.gene99874.t1 | MTR_3g069500 | 40.673 | 327 | 186 | 5 | 4 | 327 | 15 | 336 | 9.41e-79 | 253 |
MS.gene99874.t1 | MTR_4g019580 | 38.671 | 331 | 195 | 4 | 2 | 327 | 12 | 339 | 1.21e-76 | 248 |
MS.gene99874.t1 | MTR_4g033395 | 40.244 | 328 | 177 | 7 | 1 | 327 | 9 | 318 | 3.49e-75 | 241 |
MS.gene99874.t1 | MTR_4g033375 | 40.549 | 328 | 176 | 7 | 1 | 327 | 9 | 318 | 6.39e-75 | 241 |
MS.gene99874.t1 | MTR_3g112470 | 40.379 | 317 | 186 | 3 | 10 | 324 | 9 | 324 | 1.97e-74 | 241 |
MS.gene99874.t1 | MTR_3g069420 | 39.024 | 328 | 190 | 6 | 4 | 327 | 14 | 335 | 6.30e-74 | 241 |
MS.gene99874.t1 | MTR_3g112460 | 39.937 | 318 | 186 | 4 | 10 | 324 | 9 | 324 | 9.07e-74 | 239 |
MS.gene99874.t1 | MTR_3g069440 | 40.432 | 324 | 185 | 5 | 7 | 327 | 16 | 334 | 7.04e-70 | 230 |
MS.gene99874.t1 | MTR_3g112450 | 39.873 | 316 | 185 | 4 | 13 | 324 | 12 | 326 | 6.49e-68 | 224 |
MS.gene99874.t1 | MTR_4g033325 | 40.498 | 321 | 165 | 8 | 10 | 327 | 17 | 314 | 1.93e-66 | 220 |
MS.gene99874.t1 | MTR_0294s0020 | 40.854 | 328 | 171 | 7 | 1 | 327 | 9 | 314 | 3.42e-66 | 219 |
MS.gene99874.t1 | MTR_4g033330 | 40.439 | 319 | 170 | 7 | 10 | 327 | 17 | 316 | 3.58e-66 | 219 |
MS.gene99874.t1 | MTR_4g033315 | 39.498 | 319 | 173 | 7 | 10 | 327 | 17 | 316 | 1.39e-65 | 218 |
MS.gene99874.t1 | MTR_4g033310 | 39.498 | 319 | 173 | 7 | 10 | 327 | 17 | 316 | 1.39e-65 | 218 |
MS.gene99874.t1 | MTR_3g005010 | 38.769 | 325 | 164 | 6 | 8 | 327 | 14 | 308 | 8.95e-65 | 216 |
MS.gene99874.t1 | MTR_7g010820 | 36.119 | 335 | 196 | 6 | 5 | 327 | 7 | 335 | 5.30e-64 | 214 |
MS.gene99874.t1 | MTR_5g014150 | 34.731 | 334 | 204 | 6 | 5 | 327 | 25 | 355 | 1.94e-63 | 213 |
MS.gene99874.t1 | MTR_5g055000 | 36.688 | 308 | 190 | 3 | 24 | 327 | 18 | 324 | 8.57e-63 | 211 |
MS.gene99874.t1 | MTR_7g006540 | 35.988 | 339 | 204 | 6 | 1 | 327 | 38 | 375 | 5.05e-62 | 210 |
MS.gene99874.t1 | MTR_4g098800 | 34.030 | 335 | 211 | 5 | 2 | 327 | 14 | 347 | 1.09e-61 | 208 |
MS.gene99874.t1 | MTR_4g098800 | 34.030 | 335 | 211 | 5 | 2 | 327 | 79 | 412 | 3.36e-61 | 208 |
MS.gene99874.t1 | MTR_7g098200 | 48.182 | 220 | 105 | 4 | 110 | 324 | 1 | 216 | 6.04e-61 | 204 |
MS.gene99874.t1 | MTR_5g012270 | 37.578 | 322 | 192 | 6 | 14 | 327 | 19 | 339 | 2.83e-60 | 204 |
MS.gene99874.t1 | MTR_4g101380 | 38.462 | 325 | 188 | 6 | 14 | 327 | 17 | 340 | 7.22e-59 | 201 |
MS.gene99874.t1 | MTR_7g005930 | 34.591 | 318 | 199 | 6 | 16 | 327 | 27 | 341 | 3.49e-58 | 199 |
MS.gene99874.t1 | MTR_5g012290 | 37.771 | 323 | 191 | 5 | 14 | 327 | 17 | 338 | 3.08e-56 | 194 |
MS.gene99874.t1 | MTR_7g065080 | 41.365 | 249 | 140 | 3 | 82 | 327 | 2 | 247 | 3.20e-56 | 192 |
MS.gene99874.t1 | MTR_1g116930 | 33.434 | 332 | 213 | 6 | 1 | 327 | 1 | 329 | 1.24e-55 | 192 |
MS.gene99874.t1 | MTR_7g088820 | 34.472 | 322 | 201 | 5 | 13 | 327 | 16 | 334 | 1.52e-55 | 192 |
MS.gene99874.t1 | MTR_8g038880 | 41.270 | 315 | 158 | 6 | 23 | 327 | 19 | 316 | 2.07e-55 | 191 |
MS.gene99874.t1 | MTR_2g017750 | 33.824 | 340 | 212 | 5 | 1 | 327 | 11 | 350 | 6.13e-55 | 191 |
MS.gene99874.t1 | MTR_7g013270 | 36.250 | 320 | 193 | 7 | 16 | 327 | 82 | 398 | 9.10e-55 | 191 |
MS.gene99874.t1 | MTR_8g087780 | 32.840 | 338 | 208 | 4 | 5 | 327 | 2 | 335 | 1.16e-54 | 189 |
MS.gene99874.t1 | MTR_8g087810 | 32.836 | 335 | 213 | 4 | 5 | 327 | 2 | 336 | 1.96e-54 | 189 |
MS.gene99874.t1 | MTR_5g085850 | 35.928 | 334 | 195 | 5 | 4 | 327 | 10 | 334 | 6.02e-54 | 187 |
MS.gene99874.t1 | MTR_1g085090 | 33.438 | 320 | 203 | 5 | 10 | 326 | 3 | 315 | 1.33e-52 | 184 |
MS.gene99874.t1 | MTR_7g088790 | 33.762 | 311 | 198 | 4 | 24 | 327 | 29 | 338 | 1.40e-52 | 184 |
MS.gene99874.t1 | MTR_5g038060 | 38.176 | 296 | 165 | 9 | 16 | 301 | 27 | 314 | 1.59e-52 | 184 |
MS.gene99874.t1 | MTR_7g088825 | 32.492 | 317 | 206 | 4 | 18 | 327 | 16 | 331 | 2.29e-52 | 184 |
MS.gene99874.t1 | MTR_1g009200 | 33.036 | 336 | 202 | 6 | 4 | 327 | 11 | 335 | 4.58e-52 | 182 |
MS.gene99874.t1 | MTR_3g014790 | 35.987 | 314 | 164 | 6 | 28 | 327 | 21 | 311 | 1.41e-51 | 181 |
MS.gene99874.t1 | MTR_4g107580 | 33.229 | 319 | 197 | 7 | 21 | 327 | 21 | 335 | 3.54e-51 | 180 |
MS.gene99874.t1 | MTR_3g100980 | 33.542 | 319 | 196 | 6 | 18 | 327 | 10 | 321 | 4.33e-50 | 177 |
MS.gene99874.t1 | MTR_4g107610 | 35.017 | 297 | 179 | 5 | 20 | 306 | 21 | 313 | 4.63e-50 | 177 |
MS.gene99874.t1 | MTR_7g064780 | 32.938 | 337 | 214 | 7 | 2 | 327 | 4 | 339 | 1.32e-49 | 176 |
MS.gene99874.t1 | MTR_7g098210 | 37.500 | 288 | 106 | 7 | 43 | 324 | 1 | 220 | 5.26e-49 | 171 |
MS.gene99874.t1 | MTR_2g005130 | 32.530 | 332 | 203 | 8 | 2 | 327 | 18 | 334 | 1.31e-47 | 171 |
MS.gene99874.t1 | MTR_7g088820 | 35.556 | 270 | 166 | 4 | 65 | 327 | 4 | 272 | 1.87e-47 | 169 |
MS.gene99874.t1 | MTR_1g026740 | 32.258 | 310 | 196 | 7 | 26 | 327 | 19 | 322 | 2.33e-47 | 169 |
MS.gene99874.t1 | MTR_7g111260 | 33.882 | 304 | 193 | 5 | 24 | 326 | 19 | 315 | 3.45e-47 | 169 |
MS.gene99874.t1 | MTR_4g107530 | 33.333 | 312 | 191 | 6 | 28 | 327 | 37 | 343 | 1.50e-46 | 168 |
MS.gene99874.t1 | MTR_4g107510 | 34.296 | 277 | 177 | 4 | 28 | 301 | 40 | 314 | 6.98e-46 | 166 |
MS.gene99874.t1 | MTR_2g101590 | 34.286 | 315 | 189 | 8 | 24 | 327 | 26 | 333 | 1.00e-45 | 166 |
MS.gene99874.t1 | MTR_8g469480 | 32.588 | 313 | 194 | 7 | 28 | 326 | 42 | 351 | 1.98e-45 | 165 |
MS.gene99874.t1 | MTR_8g103233 | 32.344 | 337 | 200 | 8 | 1 | 327 | 5 | 323 | 3.71e-45 | 164 |
MS.gene99874.t1 | MTR_4g107670 | 30.058 | 346 | 214 | 9 | 1 | 327 | 1 | 337 | 5.70e-45 | 163 |
MS.gene99874.t1 | MTR_4g114340 | 38.614 | 303 | 177 | 4 | 1 | 301 | 1 | 296 | 2.52e-44 | 161 |
MS.gene99874.t1 | MTR_4g033310 | 46.667 | 180 | 88 | 2 | 10 | 189 | 17 | 188 | 2.60e-44 | 160 |
MS.gene99874.t1 | MTR_3g100980 | 30.836 | 347 | 196 | 7 | 18 | 327 | 10 | 349 | 2.76e-44 | 161 |
MS.gene99874.t1 | MTR_2g101610 | 34.740 | 308 | 179 | 10 | 33 | 327 | 36 | 334 | 4.39e-44 | 161 |
MS.gene99874.t1 | MTR_3g462710 | 40.724 | 221 | 127 | 2 | 110 | 327 | 1 | 220 | 6.68e-44 | 158 |
MS.gene99874.t1 | MTR_7g064800 | 31.546 | 317 | 203 | 5 | 24 | 327 | 26 | 341 | 6.24e-43 | 158 |
MS.gene99874.t1 | MTR_2g101640 | 33.987 | 306 | 186 | 9 | 33 | 327 | 32 | 332 | 2.89e-41 | 154 |
MS.gene99874.t1 | MTR_5g038380 | 30.409 | 342 | 217 | 7 | 1 | 326 | 5 | 341 | 4.75e-41 | 152 |
MS.gene99874.t1 | MTR_1g026750 | 31.090 | 312 | 197 | 7 | 26 | 327 | 20 | 323 | 6.14e-41 | 152 |
MS.gene99874.t1 | MTR_8g469310 | 28.571 | 343 | 220 | 5 | 1 | 327 | 3 | 336 | 6.86e-41 | 152 |
MS.gene99874.t1 | MTR_2g101650 | 28.743 | 334 | 215 | 7 | 6 | 327 | 10 | 332 | 2.09e-39 | 148 |
MS.gene99874.t1 | MTR_4g123537 | 29.394 | 330 | 222 | 6 | 1 | 326 | 17 | 339 | 2.66e-39 | 148 |
MS.gene99874.t1 | MTR_8g469470 | 28.086 | 324 | 220 | 4 | 16 | 327 | 24 | 346 | 8.52e-39 | 146 |
MS.gene99874.t1 | MTR_1g026770 | 30.159 | 315 | 207 | 6 | 20 | 327 | 11 | 319 | 5.43e-38 | 144 |
MS.gene99874.t1 | MTR_4g011280 | 30.882 | 340 | 206 | 12 | 1 | 327 | 16 | 339 | 1.67e-37 | 143 |
MS.gene99874.t1 | MTR_2g101560 | 34.516 | 310 | 177 | 12 | 33 | 327 | 36 | 334 | 2.84e-37 | 142 |
MS.gene99874.t1 | MTR_4g033385 | 38.182 | 220 | 117 | 7 | 109 | 327 | 16 | 217 | 5.70e-35 | 134 |
MS.gene99874.t1 | MTR_1g057460 | 31.148 | 305 | 185 | 11 | 33 | 327 | 53 | 342 | 9.58e-35 | 135 |
MS.gene99874.t1 | MTR_4g024930 | 29.642 | 307 | 192 | 8 | 2 | 301 | 14 | 303 | 1.06e-34 | 134 |
MS.gene99874.t1 | MTR_2g093160 | 28.529 | 333 | 217 | 8 | 10 | 327 | 2 | 328 | 4.17e-34 | 132 |
MS.gene99874.t1 | MTR_5g038190 | 27.554 | 323 | 221 | 5 | 16 | 327 | 16 | 336 | 1.05e-33 | 132 |
MS.gene99874.t1 | MTR_2g093640 | 30.267 | 337 | 207 | 9 | 10 | 327 | 2 | 329 | 3.07e-33 | 130 |
MS.gene99874.t1 | MTR_4g033325 | 36.486 | 222 | 115 | 8 | 109 | 327 | 18 | 216 | 3.38e-33 | 129 |
MS.gene99874.t1 | MTR_7g088820 | 34.361 | 227 | 140 | 4 | 107 | 327 | 1 | 224 | 5.26e-33 | 129 |
MS.gene99874.t1 | MTR_1g057460 | 32.677 | 254 | 150 | 9 | 82 | 327 | 31 | 271 | 7.18e-32 | 126 |
MS.gene99874.t1 | MTR_0236s0050 | 33.071 | 254 | 149 | 9 | 82 | 327 | 31 | 271 | 9.19e-32 | 125 |
MS.gene99874.t1 | MTR_4g033325 | 37.056 | 197 | 106 | 7 | 134 | 327 | 9 | 190 | 1.56e-31 | 124 |
MS.gene99874.t1 | MTR_7g051880 | 30.640 | 297 | 189 | 7 | 9 | 304 | 10 | 290 | 2.71e-30 | 122 |
MS.gene99874.t1 | MTR_6g008690 | 35.747 | 221 | 120 | 3 | 29 | 238 | 12 | 221 | 9.20e-30 | 120 |
MS.gene99874.t1 | MTR_7g052600 | 29.293 | 297 | 193 | 7 | 9 | 304 | 10 | 290 | 3.84e-29 | 118 |
MS.gene99874.t1 | MTR_2g093180 | 30.678 | 339 | 202 | 10 | 10 | 326 | 2 | 329 | 1.82e-28 | 117 |
MS.gene99874.t1 | MTR_7g051830 | 30.709 | 254 | 166 | 4 | 10 | 262 | 11 | 255 | 7.50e-28 | 115 |
MS.gene99874.t1 | MTR_1g009170 | 37.245 | 196 | 99 | 7 | 142 | 324 | 3 | 187 | 4.18e-26 | 108 |
MS.gene99874.t1 | MTR_7g064160 | 37.895 | 95 | 59 | 0 | 2 | 96 | 7 | 101 | 8.44e-17 | 76.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene99874.t1 | AT2G40460 | 70.642 | 327 | 90 | 1 | 1 | 327 | 1 | 321 | 4.15e-170 | 488 |
MS.gene99874.t1 | AT5G46050 | 49.245 | 331 | 158 | 4 | 2 | 327 | 5 | 330 | 1.07e-107 | 328 |
MS.gene99874.t1 | AT5G46040 | 49.699 | 332 | 155 | 6 | 2 | 327 | 5 | 330 | 8.61e-107 | 326 |
MS.gene99874.t1 | AT2G02040 | 44.479 | 326 | 175 | 4 | 7 | 327 | 24 | 348 | 9.28e-98 | 302 |
MS.gene99874.t1 | AT3G54140 | 44.411 | 331 | 179 | 3 | 1 | 327 | 1 | 330 | 2.33e-96 | 298 |
MS.gene99874.t1 | AT3G54140 | 44.411 | 331 | 179 | 3 | 1 | 327 | 1 | 330 | 2.33e-96 | 298 |
MS.gene99874.t1 | AT5G01180 | 44.277 | 332 | 178 | 5 | 1 | 327 | 1 | 330 | 7.67e-96 | 297 |
MS.gene99874.t1 | AT5G01180 | 44.277 | 332 | 178 | 5 | 1 | 327 | 1 | 330 | 7.67e-96 | 297 |
MS.gene99874.t1 | AT5G01180 | 44.277 | 332 | 178 | 5 | 1 | 327 | 1 | 330 | 7.67e-96 | 297 |
MS.gene99874.t1 | AT1G62200 | 44.954 | 327 | 171 | 4 | 9 | 327 | 37 | 362 | 3.73e-95 | 296 |
MS.gene99874.t1 | AT1G62200 | 41.573 | 356 | 170 | 5 | 9 | 327 | 37 | 391 | 1.51e-89 | 282 |
MS.gene99874.t1 | AT1G62200 | 41.573 | 356 | 170 | 5 | 9 | 327 | 51 | 405 | 1.93e-89 | 282 |
MS.gene99874.t1 | AT2G02020 | 44.815 | 270 | 147 | 2 | 2 | 270 | 20 | 288 | 1.27e-82 | 261 |
MS.gene99874.t1 | AT2G02020 | 44.815 | 270 | 147 | 2 | 2 | 270 | 20 | 288 | 2.56e-82 | 261 |
MS.gene99874.t1 | AT2G37900 | 39.697 | 330 | 191 | 5 | 2 | 327 | 16 | 341 | 7.00e-81 | 258 |
MS.gene99874.t1 | AT3G53960 | 38.369 | 331 | 195 | 6 | 2 | 327 | 15 | 341 | 4.81e-75 | 244 |
MS.gene99874.t1 | AT1G22570 | 41.587 | 315 | 170 | 5 | 5 | 312 | 12 | 319 | 9.02e-66 | 219 |
MS.gene99874.t1 | AT1G72125 | 42.857 | 301 | 156 | 7 | 4 | 301 | 10 | 297 | 4.61e-65 | 216 |
MS.gene99874.t1 | AT3G54450 | 40.968 | 310 | 160 | 7 | 26 | 327 | 14 | 308 | 8.34e-64 | 213 |
MS.gene99874.t1 | AT1G68570 | 37.538 | 333 | 198 | 4 | 2 | 327 | 3 | 332 | 7.41e-63 | 211 |
MS.gene99874.t1 | AT1G72120 | 42.857 | 280 | 148 | 5 | 1 | 277 | 7 | 277 | 1.26e-62 | 210 |
MS.gene99874.t1 | AT2G37900 | 41.132 | 265 | 148 | 5 | 67 | 327 | 2 | 262 | 2.63e-62 | 208 |
MS.gene99874.t1 | AT1G68570 | 39.731 | 297 | 171 | 3 | 38 | 327 | 7 | 302 | 3.63e-60 | 204 |
MS.gene99874.t1 | AT5G13400 | 36.391 | 327 | 194 | 6 | 13 | 327 | 52 | 376 | 5.37e-60 | 204 |
MS.gene99874.t1 | AT1G22540 | 42.570 | 249 | 141 | 2 | 12 | 259 | 18 | 265 | 5.77e-59 | 200 |
MS.gene99874.t1 | AT1G12110 | 37.217 | 309 | 186 | 3 | 2 | 303 | 5 | 312 | 7.48e-59 | 201 |
MS.gene99874.t1 | AT5G46050 | 45.740 | 223 | 111 | 4 | 110 | 327 | 1 | 218 | 1.44e-57 | 195 |
MS.gene99874.t1 | AT1G22550 | 42.143 | 280 | 148 | 5 | 5 | 277 | 12 | 284 | 2.77e-57 | 196 |
MS.gene99874.t1 | AT4G21680 | 33.234 | 334 | 208 | 5 | 5 | 327 | 9 | 338 | 5.42e-57 | 196 |
MS.gene99874.t1 | AT1G32450 | 32.641 | 337 | 210 | 7 | 5 | 327 | 18 | 351 | 1.51e-56 | 195 |
MS.gene99874.t1 | AT3G21670 | 36.391 | 327 | 186 | 5 | 14 | 327 | 19 | 336 | 1.76e-56 | 194 |
MS.gene99874.t1 | AT1G72140 | 37.748 | 302 | 162 | 6 | 12 | 304 | 22 | 306 | 2.14e-56 | 194 |
MS.gene99874.t1 | AT1G22570 | 41.053 | 285 | 155 | 4 | 35 | 312 | 4 | 282 | 2.39e-56 | 193 |
MS.gene99874.t1 | AT2G26690 | 40.264 | 303 | 172 | 4 | 1 | 301 | 1 | 296 | 3.20e-56 | 194 |
MS.gene99874.t1 | AT1G59740 | 33.233 | 331 | 215 | 3 | 2 | 327 | 19 | 348 | 2.26e-55 | 191 |
MS.gene99874.t1 | AT1G18880 | 33.548 | 310 | 191 | 6 | 28 | 327 | 23 | 327 | 1.88e-52 | 184 |
MS.gene99874.t1 | AT1G72130 | 40.925 | 281 | 149 | 5 | 25 | 302 | 26 | 292 | 5.06e-52 | 181 |
MS.gene99874.t1 | AT1G52190 | 34.405 | 311 | 173 | 7 | 2 | 301 | 9 | 299 | 1.09e-50 | 179 |
MS.gene99874.t1 | AT5G19640 | 32.686 | 309 | 197 | 6 | 25 | 327 | 60 | 363 | 7.58e-50 | 177 |
MS.gene99874.t1 | AT5G28470 | 35.374 | 294 | 171 | 6 | 21 | 305 | 14 | 297 | 3.43e-48 | 172 |
MS.gene99874.t1 | AT5G28470 | 35.374 | 294 | 171 | 6 | 21 | 305 | 14 | 297 | 3.72e-48 | 171 |
MS.gene99874.t1 | AT1G33440 | 34.718 | 337 | 198 | 8 | 1 | 327 | 15 | 339 | 4.19e-47 | 169 |
MS.gene99874.t1 | AT3G16180 | 34.951 | 309 | 180 | 9 | 33 | 327 | 32 | 333 | 2.64e-46 | 167 |
MS.gene99874.t1 | AT1G69870 | 31.761 | 318 | 203 | 4 | 21 | 327 | 48 | 362 | 1.06e-45 | 166 |
MS.gene99874.t1 | AT2G26690 | 39.925 | 268 | 152 | 4 | 36 | 301 | 3 | 263 | 1.95e-45 | 164 |
MS.gene99874.t1 | AT1G69850 | 29.972 | 357 | 208 | 8 | 1 | 327 | 1 | 345 | 1.26e-44 | 162 |
MS.gene99874.t1 | AT5G62680 | 31.833 | 311 | 197 | 6 | 28 | 327 | 47 | 353 | 2.45e-44 | 162 |
MS.gene99874.t1 | AT1G69860 | 33.692 | 279 | 176 | 5 | 28 | 301 | 22 | 296 | 1.32e-43 | 159 |
MS.gene99874.t1 | AT3G47960 | 33.657 | 309 | 192 | 7 | 28 | 327 | 65 | 369 | 4.62e-43 | 159 |
MS.gene99874.t1 | AT3G45690 | 31.935 | 310 | 193 | 9 | 23 | 326 | 17 | 314 | 5.23e-43 | 157 |
MS.gene99874.t1 | AT2G26690 | 40.078 | 257 | 145 | 4 | 47 | 301 | 2 | 251 | 2.18e-42 | 155 |
MS.gene99874.t1 | AT3G25260 | 31.329 | 316 | 200 | 6 | 14 | 327 | 11 | 311 | 2.65e-41 | 152 |
MS.gene99874.t1 | AT3G45680 | 29.296 | 355 | 220 | 10 | 8 | 357 | 6 | 334 | 2.69e-41 | 153 |
MS.gene99874.t1 | AT3G45700 | 29.677 | 310 | 203 | 7 | 23 | 327 | 15 | 314 | 1.22e-38 | 145 |
MS.gene99874.t1 | AT5G14940 | 35.075 | 268 | 151 | 6 | 24 | 277 | 7 | 265 | 4.59e-38 | 144 |
MS.gene99874.t1 | AT3G45650 | 27.134 | 328 | 215 | 7 | 8 | 327 | 6 | 317 | 4.61e-38 | 144 |
MS.gene99874.t1 | AT3G45650 | 27.134 | 328 | 215 | 7 | 8 | 327 | 6 | 317 | 5.39e-38 | 144 |
MS.gene99874.t1 | AT3G45710 | 29.641 | 334 | 209 | 10 | 8 | 327 | 4 | 325 | 8.47e-38 | 143 |
MS.gene99874.t1 | AT1G27040 | 30.154 | 325 | 211 | 6 | 10 | 327 | 13 | 328 | 1.38e-37 | 142 |
MS.gene99874.t1 | AT1G27040 | 30.154 | 325 | 211 | 6 | 10 | 327 | 9 | 324 | 1.62e-37 | 142 |
MS.gene99874.t1 | AT3G45660 | 29.693 | 293 | 182 | 6 | 43 | 327 | 61 | 337 | 1.71e-37 | 142 |
MS.gene99874.t1 | AT3G45660 | 29.693 | 293 | 182 | 6 | 43 | 327 | 40 | 316 | 1.91e-37 | 142 |
MS.gene99874.t1 | AT3G45660 | 29.693 | 293 | 182 | 6 | 43 | 327 | 40 | 316 | 1.91e-37 | 142 |
MS.gene99874.t1 | AT3G25280 | 31.683 | 303 | 185 | 6 | 5 | 304 | 2 | 285 | 4.19e-37 | 140 |
MS.gene99874.t1 | AT5G62730 | 31.061 | 264 | 165 | 3 | 2 | 261 | 34 | 284 | 1.00e-36 | 140 |
MS.gene99874.t1 | AT1G27080 | 32.517 | 286 | 185 | 5 | 24 | 304 | 14 | 296 | 2.33e-36 | 139 |
MS.gene99874.t1 | AT3G45720 | 29.747 | 316 | 194 | 9 | 46 | 357 | 41 | 332 | 3.42e-35 | 136 |
MS.gene99874.t1 | AT3G01350 | 33.456 | 272 | 151 | 7 | 26 | 277 | 9 | 270 | 7.31e-35 | 135 |
MS.gene99874.t1 | AT1G27040 | 30.263 | 304 | 196 | 6 | 31 | 327 | 2 | 296 | 1.47e-33 | 131 |
MS.gene99874.t1 | AT5G62730 | 31.356 | 236 | 145 | 3 | 30 | 261 | 3 | 225 | 3.43e-32 | 127 |
MS.gene99874.t1 | AT1G27080 | 32.157 | 255 | 165 | 5 | 55 | 304 | 3 | 254 | 7.84e-28 | 115 |
MS.gene99874.t1 | AT5G11570 | 28.333 | 240 | 150 | 6 | 16 | 247 | 15 | 240 | 1.38e-27 | 114 |
MS.gene99874.t1 | AT1G72130 | 42.262 | 168 | 87 | 4 | 138 | 302 | 14 | 174 | 1.53e-25 | 107 |
MS.gene99874.t1 | AT1G72130 | 42.262 | 168 | 87 | 4 | 138 | 302 | 14 | 174 | 1.53e-25 | 107 |
MS.gene99874.t1 | AT2G38100 | 26.693 | 251 | 161 | 7 | 52 | 301 | 2 | 230 | 8.86e-16 | 79.3 |
MS.gene99874.t1 | AT2G38100 | 26.693 | 251 | 161 | 7 | 52 | 301 | 18 | 246 | 1.15e-15 | 79.0 |
MS.gene99874.t1 | AT2G38100 | 26.693 | 251 | 161 | 7 | 52 | 301 | 24 | 252 | 1.59e-15 | 78.6 |
Find 91 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAATGGAACATTGTGTTATT+AGG | 0.143035 | 3.2:+65162440 | MS.gene99874:CDS |
TCCTCATGAGAAAGAGTTAA+AGG | 0.194574 | 3.2:+65162132 | MS.gene99874:CDS |
TAAAGGCTTCTTTCTTTAAT+TGG | 0.203778 | 3.2:+65162149 | MS.gene99874:CDS |
TGCTGGTTTATTATTGTCTT+TGG | 0.212439 | 3.2:+65162270 | MS.gene99874:CDS |
AGCCTTCCATTTCCCAGTTT+TGG | 0.219265 | 3.2:-65160913 | None:intergenic |
GCACCAAAAGTTGAGATATT+TGG | 0.221917 | 3.2:-65162088 | None:intergenic |
ATTCTTACCTGGGTCGCTTC+TGG | 0.236583 | 3.2:+65161242 | MS.gene99874:CDS |
GTGCCTTAATTGCAACTTTA+GGG | 0.240529 | 3.2:+65162194 | MS.gene99874:CDS |
AATGGAACATTGTGTTATTA+GGG | 0.240985 | 3.2:+65162441 | MS.gene99874:CDS |
GTATATATTCAAGAGAATTT+AGG | 0.251074 | 3.2:+65162220 | MS.gene99874:CDS |
GGTGCCTTAATTGCAACTTT+AGG | 0.256324 | 3.2:+65162193 | MS.gene99874:CDS |
AAGCCCTAAAGTTGCAATTA+AGG | 0.273762 | 3.2:-65162197 | None:intergenic |
CTAACTTTGTGTCGATAAAT+TGG | 0.279561 | 3.2:-65162313 | None:intergenic |
CCTGCTGTTCCATCCAAAAC+TGG | 0.284363 | 3.2:+65160900 | MS.gene99874:CDS |
TCTACTTGATTTACTGTCAT+TGG | 0.286034 | 3.2:-65164456 | None:intergenic |
ATCATGGGTATAGTCTTCTT+TGG | 0.286104 | 3.2:-65160853 | None:intergenic |
AAACCAAATATCTCAACTTT+TGG | 0.301836 | 3.2:+65162085 | MS.gene99874:CDS |
TTAGGATGGGGACTTGGATA+TGG | 0.322007 | 3.2:+65162238 | MS.gene99874:CDS |
TTTGAAAGGATGGCCTTCTA+TGG | 0.336648 | 3.2:+65161091 | MS.gene99874:CDS |
ATTGTGTTATTAGGGGAAAA+AGG | 0.344611 | 3.2:+65162449 | MS.gene99874:CDS |
GTTTGGATAACACCAATTCT+TGG | 0.350998 | 3.2:+65161205 | MS.gene99874:CDS |
CTCATCTCTCATTTATGTCT+TGG | 0.355515 | 3.2:+65161276 | MS.gene99874:CDS |
GAGGATTAAAATCATCAAAT+TGG | 0.372384 | 3.2:-65162114 | None:intergenic |
AGGAATGTTAATACATGGTC+AGG | 0.381248 | 3.2:+65161178 | MS.gene99874:CDS |
CTTCTTGAGGAACCAGTTGT+AGG | 0.391292 | 3.2:-65164429 | None:intergenic |
CAATTTATCGACACAAAGTT+AGG | 0.392936 | 3.2:+65162314 | MS.gene99874:CDS |
CTGCGCCGTGCAACGATTGT+AGG | 0.392972 | 3.2:-65165304 | None:intergenic |
AAGATACTGTTTCATCAGTT+AGG | 0.396676 | 3.2:+65161158 | MS.gene99874:CDS |
AATGGAAGGTAATTCAACTT+TGG | 0.407537 | 3.2:+65165238 | MS.gene99874:CDS |
ATACATGGTCAGGGTCTGTT+TGG | 0.412198 | 3.2:+65161188 | MS.gene99874:CDS |
AGAAGCACTTTGTGTTCAAA+TGG | 0.412642 | 3.2:+65165220 | MS.gene99874:CDS |
TTCCATCCAAAACTGGGAAA+TGG | 0.419022 | 3.2:+65160907 | MS.gene99874:CDS |
GTTTGATGCAACTCCATAGA+AGG | 0.419937 | 3.2:-65161104 | None:intergenic |
CTTCATGAAGTTGTGTTGTA+AGG | 0.420306 | 3.2:-65161138 | None:intergenic |
CTATGGAGTTGCATCAAACT+TGG | 0.433756 | 3.2:+65161108 | MS.gene99874:CDS |
ATGACAGTAAATCAAGTAGA+AGG | 0.439592 | 3.2:+65164459 | MS.gene99874:CDS |
GCACTTTACACAATGGCAAT+TGG | 0.443556 | 3.2:+65162049 | MS.gene99874:CDS |
TCAACTTTGGATGCATCTCT+TGG | 0.444482 | 3.2:+65165251 | MS.gene99874:CDS |
CAAATTCCATTTGTGCATGT+TGG | 0.447193 | 3.2:-65161986 | None:intergenic |
TGTAGATCTGAAGGGTTACT+AGG | 0.449676 | 3.2:-65162409 | None:intergenic |
ACACTTGCTTACCTCAAAGT+TGG | 0.452079 | 3.2:-65162487 | None:intergenic |
TGCGCCGTGCAACGATTGTA+GGG | 0.452822 | 3.2:-65165303 | None:intergenic |
TCTATCACACTCCAACTTTG+AGG | 0.456422 | 3.2:+65162476 | MS.gene99874:CDS |
AGGCTTCTTTCTTTAATTGG+TGG | 0.457739 | 3.2:+65162152 | MS.gene99874:CDS |
GAGAATTTAGGATGGGGACT+TGG | 0.459132 | 3.2:+65162232 | MS.gene99874:CDS |
GGATATGGTATTCCTACTGC+TGG | 0.460012 | 3.2:+65162253 | MS.gene99874:CDS |
CGTTGCACGGCGCAGTGCCA+TGG | 0.461082 | 3.2:+65165312 | MS.gene99874:CDS |
GCAATGTAAGCACCAAGAAT+TGG | 0.467213 | 3.2:-65161217 | None:intergenic |
GTTGCACGGCGCAGTGCCAT+GGG | 0.469791 | 3.2:+65165313 | MS.gene99874:CDS |
ATTAAAGAAGATCCTACAAC+TGG | 0.473810 | 3.2:+65164417 | MS.gene99874:CDS |
TTACATTGCAGATTCTTACC+TGG | 0.476724 | 3.2:+65161231 | MS.gene99874:CDS |
AGATCTACATGAGTTTCAAA+TGG | 0.478491 | 3.2:+65162423 | MS.gene99874:CDS |
TACACAATGGCAATTGGTGC+AGG | 0.489428 | 3.2:+65162055 | MS.gene99874:CDS |
TTGAAACCAACATGCACAAA+TGG | 0.494777 | 3.2:+65161980 | MS.gene99874:CDS |
TACATTGCAGATTCTTACCT+GGG | 0.494969 | 3.2:+65161232 | MS.gene99874:CDS |
GGAAATCAACAGTTCCATCA+TGG | 0.497099 | 3.2:-65160869 | None:intergenic |
TGTCATTGGTGCTCTTCTTG+AGG | 0.497730 | 3.2:-65164442 | None:intergenic |
GAAGGAGCAAAGCTAATCCT+TGG | 0.508830 | 3.2:+65164477 | MS.gene99874:CDS |
TGAAACTCATGTAGATCTGA+AGG | 0.512547 | 3.2:-65162418 | None:intergenic |
AAGTAGATACATTTACAAGA+AGG | 0.524961 | 3.2:+65165181 | MS.gene99874:intron |
GCCTTTAACTCTTTCTCATG+AGG | 0.529898 | 3.2:-65162133 | None:intergenic |
GCACTTTGTGTTCAAATGGA+AGG | 0.535871 | 3.2:+65165224 | MS.gene99874:CDS |
AAAGAAGACTATACCCATGA+TGG | 0.538056 | 3.2:+65160855 | MS.gene99874:CDS |
GACATCTAAAAGTCCTGCTA+AGG | 0.544118 | 3.2:+65162336 | MS.gene99874:CDS |
ACACGAATTATATCCTTAGC+AGG | 0.545832 | 3.2:-65162349 | None:intergenic |
GAAATCAACAGTTCCATCAT+GGG | 0.552746 | 3.2:-65160868 | None:intergenic |
TATTCAAGAGAATTTAGGAT+GGG | 0.557111 | 3.2:+65162225 | MS.gene99874:CDS |
CTGCTGTTCCATCCAAAACT+GGG | 0.558606 | 3.2:+65160901 | MS.gene99874:CDS |
CAGTTAGGAATGTTAATACA+TGG | 0.561918 | 3.2:+65161173 | MS.gene99874:CDS |
GTATGAAGCATTTGAAAGGA+TGG | 0.563974 | 3.2:+65161081 | MS.gene99874:CDS |
CAGGGTATGAAGCATTTGAA+AGG | 0.571557 | 3.2:+65161077 | MS.gene99874:intron |
TCTTGGCTTACAAGTATGAG+AGG | 0.577434 | 3.2:+65165268 | MS.gene99874:CDS |
TGAAAGTCCAGAAGCGACCC+AGG | 0.586084 | 3.2:-65161249 | None:intergenic |
GATGGAACTGTTGATTTCCA+CGG | 0.587530 | 3.2:+65160873 | MS.gene99874:CDS |
ATGGAACAGCAGGTTTGCCG+TGG | 0.589059 | 3.2:-65160890 | None:intergenic |
GACATAAATGAGAGATGAGA+GGG | 0.589839 | 3.2:-65161272 | None:intergenic |
GACAATAATAAACCAGCAGT+AGG | 0.594102 | 3.2:-65162265 | None:intergenic |
ACAATGGCAATTGGTGCAGG+TGG | 0.594161 | 3.2:+65162058 | MS.gene99874:CDS |
ATATTCAAGAGAATTTAGGA+TGG | 0.594332 | 3.2:+65162224 | MS.gene99874:CDS |
GAAACTCATGTAGATCTGAA+GGG | 0.608617 | 3.2:-65162417 | None:intergenic |
ATTCAAGAGAATTTAGGATG+GGG | 0.609796 | 3.2:+65162226 | MS.gene99874:CDS |
ATCCAAAACTGGGAAATGGA+AGG | 0.616857 | 3.2:+65160911 | MS.gene99874:CDS |
CACAAATGGAATTTGCAACA+AGG | 0.617097 | 3.2:+65161994 | MS.gene99874:CDS |
GATAGATCTAACGGTCCCCA+TGG | 0.620057 | 3.2:-65165329 | None:intergenic |
ATGGAACATTGTGTTATTAG+GGG | 0.621546 | 3.2:+65162442 | MS.gene99874:CDS |
CTACACAGCACTTTACACAA+TGG | 0.627388 | 3.2:+65162042 | MS.gene99874:CDS |
AGACATAAATGAGAGATGAG+AGG | 0.629204 | 3.2:-65161273 | None:intergenic |
GATCCCCTACAATCGTTGCA+CGG | 0.668060 | 3.2:+65165299 | MS.gene99874:CDS |
GGAATGTTAATACATGGTCA+GGG | 0.669674 | 3.2:+65161179 | MS.gene99874:CDS |
GCGCCGTGCAACGATTGTAG+GGG | 0.684389 | 3.2:-65165302 | None:intergenic |
TTGCACGGCGCAGTGCCATG+GGG | 0.685830 | 3.2:+65165314 | MS.gene99874:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATTATGAATATTTCAAAA+AGG | + | chr3.2:65162622-65162641 | MS.gene99874:intron | 10.0% |
!! | AATTAATTGTTTATATTATG+GGG | + | chr3.2:65161006-65161025 | MS.gene99874:intron | 10.0% |
!! | TACTTATATATATTAATTCA+GGG | + | chr3.2:65161059-65161078 | MS.gene99874:intron | 10.0% |
!! | TTAATAAAAGAATAGTTATA+GGG | - | chr3.2:65163992-65164011 | None:intergenic | 10.0% |
!! | TTACTTATATATATTAATTC+AGG | + | chr3.2:65161058-65161077 | MS.gene99874:intron | 10.0% |
!! | TTTAATAAAAGAATAGTTAT+AGG | - | chr3.2:65163993-65164012 | None:intergenic | 10.0% |
!!! | ATAATAATATGTCAATTTTA+AGG | - | chr3.2:65164312-65164331 | None:intergenic | 10.0% |
!! | ATATATAAGTAAAAACCTAT+AGG | - | chr3.2:65161050-65161069 | None:intergenic | 15.0% |
!! | ATTAATAATTCATGTTAACA+AGG | - | chr3.2:65161392-65161411 | None:intergenic | 15.0% |
!! | GAAAAAAAAAAAAAGACTTT+GGG | - | chr3.2:65162537-65162556 | None:intergenic | 15.0% |
!! | GTTAAATCAAATGTAATAAT+CGG | + | chr3.2:65163545-65163564 | MS.gene99874:intron | 15.0% |
!! | GTTATCTGAATATTAAATTT+GGG | + | chr3.2:65163253-65163272 | MS.gene99874:intron | 15.0% |
!! | TATTATCATCAATATTTCTT+AGG | + | chr3.2:65164326-65164345 | MS.gene99874:intron | 15.0% |
!! | TGAAAAAAAAAAAAAGACTT+TGG | - | chr3.2:65162538-65162557 | None:intergenic | 15.0% |
!! | TGAAGTTATAACTTTATAAT+CGG | - | chr3.2:65161335-65161354 | None:intergenic | 15.0% |
!! | TGTTATCTGAATATTAAATT+TGG | + | chr3.2:65163252-65163271 | MS.gene99874:intron | 15.0% |
!! | TTAAATCAAATGTAATAATC+GGG | + | chr3.2:65163546-65163565 | MS.gene99874:intron | 15.0% |
!! | TTATCTGAATATTAAATTTG+GGG | + | chr3.2:65163254-65163273 | MS.gene99874:intron | 15.0% |
!! | TTTATTTGCTTAATTAACAA+GGG | + | chr3.2:65163136-65163155 | MS.gene99874:intron | 15.0% |
!!! | ATTAGATTTGAGTTAATATT+AGG | - | chr3.2:65161309-65161328 | None:intergenic | 15.0% |
!!! | GATAAATAATGGTAAATTTT+GGG | + | chr3.2:65162951-65162970 | MS.gene99874:intron | 15.0% |
!!! | TGATAAATAATGGTAAATTT+TGG | + | chr3.2:65162950-65162969 | MS.gene99874:intron | 15.0% |
!! | ATATTCAGATAACATATTTG+TGG | - | chr3.2:65163246-65163265 | None:intergenic | 20.0% |
!! | ATATTCATAATTTCATAGAC+CGG | - | chr3.2:65162615-65162634 | None:intergenic | 20.0% |
!! | GTATATATTCAAGAGAATTT+AGG | + | chr3.2:65162220-65162239 | MS.gene99874:CDS | 20.0% |
!!! | ATAAAAGAGAATCACAATTT+TGG | + | chr3.2:65164822-65164841 | MS.gene99874:intron | 20.0% |
!!! | ATAAGTGTACAATTTTATAC+AGG | + | chr3.2:65163290-65163309 | MS.gene99874:intron | 20.0% |
!!! | ATGCATGTTTTGTTAAATTT+TGG | + | chr3.2:65160964-65160983 | MS.gene99874:intron | 20.0% |
!!! | CATTTAATTTTTCGATCTAA+AGG | + | chr3.2:65163212-65163231 | MS.gene99874:intron | 20.0% |
!!! | CTTTATTTGCTTAATTAACA+AGG | + | chr3.2:65163135-65163154 | MS.gene99874:intron | 20.0% |
!!! | CTTTGGTTATTTTCTATATT+GGG | + | chr3.2:65162287-65162306 | MS.gene99874:CDS | 20.0% |
!!! | TCTTTGGTTATTTTCTATAT+TGG | + | chr3.2:65162286-65162305 | MS.gene99874:CDS | 20.0% |
!!! | TTAAGAACTTGCTATTAATT+TGG | - | chr3.2:65162727-65162746 | None:intergenic | 20.0% |
! | AACAACCAAAATATACTCAT+AGG | - | chr3.2:65164864-65164883 | None:intergenic | 25.0% |
! | AAGTAGATACATTTACAAGA+AGG | + | chr3.2:65165181-65165200 | MS.gene99874:intron | 25.0% |
! | ACAACCAAAATATACTCATA+GGG | - | chr3.2:65164863-65164882 | None:intergenic | 25.0% |
! | ATACCAATAAGAACATATTG+TGG | - | chr3.2:65164888-65164907 | None:intergenic | 25.0% |
! | ATATTCAAGAGAATTTAGGA+TGG | + | chr3.2:65162224-65162243 | MS.gene99874:CDS | 25.0% |
! | ATGAATATTTCAAAAAGGTC+TGG | + | chr3.2:65162627-65162646 | MS.gene99874:intron | 25.0% |
! | ATGAATGTGAATATAGAAAG+TGG | + | chr3.2:65163030-65163049 | MS.gene99874:intron | 25.0% |
! | ATTACTTGAGTTAAGATTTG+TGG | - | chr3.2:65163510-65163529 | None:intergenic | 25.0% |
! | CTCACTTAGATTACTATTAT+GGG | + | chr3.2:65165108-65165127 | MS.gene99874:intron | 25.0% |
! | GAGGATTAAAATCATCAAAT+TGG | - | chr3.2:65162117-65162136 | None:intergenic | 25.0% |
! | TAAAGGCTTCTTTCTTTAAT+TGG | + | chr3.2:65162149-65162168 | MS.gene99874:CDS | 25.0% |
! | TATATATAGCATGATCCTAT+AGG | + | chr3.2:65161032-65161051 | MS.gene99874:intron | 25.0% |
! | TCTCACTTAGATTACTATTA+TGG | + | chr3.2:65165107-65165126 | MS.gene99874:intron | 25.0% |
! | TTACCACAATATGTTCTTAT+TGG | + | chr3.2:65164882-65164901 | MS.gene99874:intron | 25.0% |
!! | AAACCAAATATCTCAACTTT+TGG | + | chr3.2:65162085-65162104 | MS.gene99874:CDS | 25.0% |
!! | AAATGGAACATTGTGTTATT+AGG | + | chr3.2:65162440-65162459 | MS.gene99874:CDS | 25.0% |
!! | AAGCATAGCAATTTAAAACA+AGG | - | chr3.2:65161615-65161634 | None:intergenic | 25.0% |
!! | AATGGAACATTGTGTTATTA+GGG | + | chr3.2:65162441-65162460 | MS.gene99874:CDS | 25.0% |
!! | ACTTGAGTTTAGTTTAGTAT+CGG | - | chr3.2:65164137-65164156 | None:intergenic | 25.0% |
!! | CTTAATTTGATAACCAATTC+AGG | + | chr3.2:65164376-65164395 | MS.gene99874:intron | 25.0% |
!! | TATTCAAGAGAATTTAGGAT+GGG | + | chr3.2:65162225-65162244 | MS.gene99874:CDS | 25.0% |
!! | TTGAAGTTTTCTATTCTTGA+AGG | - | chr3.2:65162386-65162405 | None:intergenic | 25.0% |
!!! | AAATTTTGGGACCATAAAAT+TGG | + | chr3.2:65162964-65162983 | MS.gene99874:intron | 25.0% |
!!! | AATAATCCTTAGTTTTTGTG+GGG | - | chr3.2:65163332-65163351 | None:intergenic | 25.0% |
!!! | CAATAATCCTTAGTTTTTGT+GGG | - | chr3.2:65163333-65163352 | None:intergenic | 25.0% |
!!! | CATTTTTTTCCATCAATTCA+AGG | - | chr3.2:65161774-65161793 | None:intergenic | 25.0% |
!!! | GAATTTCTTGAACAGTTTTT+TGG | + | chr3.2:65165016-65165035 | MS.gene99874:intron | 25.0% |
!!! | GTTGAGTATTGGTATTTTAT+AGG | + | chr3.2:65163881-65163900 | MS.gene99874:intron | 25.0% |
!!! | TAATTTGTTGGTGTTTTTGT+GGG | + | chr3.2:65165154-65165173 | MS.gene99874:intron | 25.0% |
!!! | TCTGAATTTTAGTTGAGTAT+TGG | + | chr3.2:65163870-65163889 | MS.gene99874:intron | 25.0% |
!!! | TTAATTTGTTGGTGTTTTTG+TGG | + | chr3.2:65165153-65165172 | MS.gene99874:intron | 25.0% |
!!! | TTTTTTCCGTGAATTTAAAC+AGG | + | chr3.2:65162895-65162914 | MS.gene99874:intron | 25.0% |
!!! | TTTTTTTTTCACTTTGCATG+AGG | + | chr3.2:65162547-65162566 | MS.gene99874:intron | 25.0% |
AAAACAACCAAGCCTTAAAT+GGG | - | chr3.2:65164074-65164093 | None:intergenic | 30.0% | |
AAAGATAAGTGAATGAGTTG+AGG | - | chr3.2:65163579-65163598 | None:intergenic | 30.0% | |
AAATCAAGTGCGTATCTATT+TGG | + | chr3.2:65164164-65164183 | MS.gene99874:intron | 30.0% | |
AAATTGCTATGCTTACCAAT+TGG | + | chr3.2:65161621-65161640 | MS.gene99874:intron | 30.0% | |
AAGATACTGTTTCATCAGTT+AGG | + | chr3.2:65161158-65161177 | MS.gene99874:CDS | 30.0% | |
AATGGAAGGTAATTCAACTT+TGG | + | chr3.2:65165238-65165257 | MS.gene99874:CDS | 30.0% | |
ACAATGACTGATAAGATAAC+AGG | + | chr3.2:65165041-65165060 | MS.gene99874:intron | 30.0% | |
ACTCTATTAAACTGTCAAGT+TGG | - | chr3.2:65162773-65162792 | None:intergenic | 30.0% | |
ACTCTTATGAATGATCACTT+TGG | + | chr3.2:65161798-65161817 | MS.gene99874:intron | 30.0% | |
AGATCTACATGAGTTTCAAA+TGG | + | chr3.2:65162423-65162442 | MS.gene99874:CDS | 30.0% | |
ATAGTGAACAATCTTGTCTT+TGG | - | chr3.2:65163768-65163787 | None:intergenic | 30.0% | |
ATAGTTAAGAGTTTGTCTAG+TGG | - | chr3.2:65163850-65163869 | None:intergenic | 30.0% | |
ATCACATTACTTCAAAGACT+TGG | + | chr3.2:65164729-65164748 | MS.gene99874:intron | 30.0% | |
ATGACAGTAAATCAAGTAGA+AGG | + | chr3.2:65164459-65164478 | MS.gene99874:CDS | 30.0% | |
ATGATGTTTGAGCAGTAAAA+TGG | - | chr3.2:65163367-65163386 | None:intergenic | 30.0% | |
ATTAAAGAAGATCCTACAAC+TGG | + | chr3.2:65164417-65164436 | MS.gene99874:CDS | 30.0% | |
ATTTGCTTAATTAACAAGGG+TGG | + | chr3.2:65163139-65163158 | MS.gene99874:intron | 30.0% | |
CAATTTATCGACACAAAGTT+AGG | + | chr3.2:65162314-65162333 | MS.gene99874:CDS | 30.0% | |
CAGTTAGGAATGTTAATACA+TGG | + | chr3.2:65161173-65161192 | MS.gene99874:CDS | 30.0% | |
CATAAAATTGGATGGAGAAA+AGG | + | chr3.2:65162976-65162995 | MS.gene99874:intron | 30.0% | |
CATTGTGAAACATAGTGATT+TGG | - | chr3.2:65162875-65162894 | None:intergenic | 30.0% | |
CCACAAAAACTAAGGATTAT+TGG | + | chr3.2:65163331-65163350 | MS.gene99874:intron | 30.0% | |
CCATATATGGAAAAACAACT+AGG | - | chr3.2:65163710-65163729 | None:intergenic | 30.0% | |
GAAGAATTCCAATAATCCAA+TGG | - | chr3.2:65164928-65164947 | None:intergenic | 30.0% | |
GCTACATGTCATAAATAAGT+TGG | - | chr3.2:65161729-65161748 | None:intergenic | 30.0% | |
TAACTTCATAACCACTTGTT+TGG | + | chr3.2:65161347-65161366 | MS.gene99874:intron | 30.0% | |
TATCAAGCATATCCCATTTA+AGG | + | chr3.2:65164059-65164078 | MS.gene99874:intron | 30.0% | |
TATCAGTCCTTCTCAAAATA+TGG | + | chr3.2:65162663-65162682 | MS.gene99874:intron | 30.0% | |
TCTACTTGATTTACTGTCAT+TGG | - | chr3.2:65164459-65164478 | None:intergenic | 30.0% | |
TTACTTCAAAGACTTGGAAT+AGG | + | chr3.2:65164735-65164754 | MS.gene99874:intron | 30.0% | |
TTGGACCATAAGACAATTAA+AGG | + | chr3.2:65161366-65161385 | MS.gene99874:intron | 30.0% | |
TTTCAATGCCATTGGATTAT+TGG | + | chr3.2:65164917-65164936 | MS.gene99874:intron | 30.0% | |
TTTGCTTAATTAACAAGGGT+GGG | + | chr3.2:65163140-65163159 | MS.gene99874:intron | 30.0% | |
TTTGTAAGACATTCTCAAAC+CGG | + | chr3.2:65162593-65162612 | MS.gene99874:intron | 30.0% | |
! | AACACTCTTTTTGTGAAACA+AGG | + | chr3.2:65164555-65164574 | MS.gene99874:intron | 30.0% |
! | AATTAAGGCACCTAAAAATG+AGG | - | chr3.2:65162185-65162204 | None:intergenic | 30.0% |
! | ATGGAACATTGTGTTATTAG+GGG | + | chr3.2:65162442-65162461 | MS.gene99874:CDS | 30.0% |
! | ATTCAAGAGAATTTAGGATG+GGG | + | chr3.2:65162226-65162245 | MS.gene99874:CDS | 30.0% |
! | ATTGTGTTATTAGGGGAAAA+AGG | + | chr3.2:65162449-65162468 | MS.gene99874:CDS | 30.0% |
! | CTAACTTTGTGTCGATAAAT+TGG | - | chr3.2:65162316-65162335 | None:intergenic | 30.0% |
! | CTTTTCTCCATCCAATTTTA+TGG | - | chr3.2:65162978-65162997 | None:intergenic | 30.0% |
! | TCAGTGTTACTAACCATATT+AGG | - | chr3.2:65164509-65164528 | None:intergenic | 30.0% |
! | TGTGACACATTTTCCATATA+TGG | - | chr3.2:65163723-65163742 | None:intergenic | 30.0% |
! | TTGTCCCTATGAGTATATTT+TGG | + | chr3.2:65164856-65164875 | MS.gene99874:intron | 30.0% |
! | TTTTTCCATCAATTCAAGGT+GGG | - | chr3.2:65161770-65161789 | None:intergenic | 30.0% |
!! | CCAATAATCCTTAGTTTTTG+TGG | - | chr3.2:65163334-65163353 | None:intergenic | 30.0% |
!! | CTTGTCAAGTGTTAATTTGT+TGG | + | chr3.2:65165142-65165161 | MS.gene99874:intron | 30.0% |
!! | TGATAACCAATTCAGGTTTT+TGG | + | chr3.2:65164383-65164402 | MS.gene99874:intron | 30.0% |
!! | TGCTGGTTTATTATTGTCTT+TGG | + | chr3.2:65162270-65162289 | MS.gene99874:CDS | 30.0% |
!! | TGGATGTTTACCTCATTTTT+AGG | + | chr3.2:65162172-65162191 | MS.gene99874:CDS | 30.0% |
!!! | ACATTTTTTTAGAGGTACTG+CGG | - | chr3.2:65163418-65163437 | None:intergenic | 30.0% |
!!! | CCTAGTTGTTTTTCCATATA+TGG | + | chr3.2:65163707-65163726 | MS.gene99874:intron | 30.0% |
!!! | TTTTTTCCATCAATTCAAGG+TGG | - | chr3.2:65161771-65161790 | None:intergenic | 30.0% |
AAAATGCCCCACAAAAACTA+AGG | + | chr3.2:65163323-65163342 | MS.gene99874:intron | 35.0% | |
AAAGAAGACTATACCCATGA+TGG | + | chr3.2:65160855-65160874 | MS.gene99874:CDS | 35.0% | |
AAGCCCTAAAGTTGCAATTA+AGG | - | chr3.2:65162200-65162219 | None:intergenic | 35.0% | |
AAGTGTATAGTTACACGCAT+AGG | + | chr3.2:65163803-65163822 | MS.gene99874:intron | 35.0% | |
ACACGAATTATATCCTTAGC+AGG | - | chr3.2:65162352-65162371 | None:intergenic | 35.0% | |
ACTGATAAGATAACAGGAAG+AGG | + | chr3.2:65165047-65165066 | MS.gene99874:intron | 35.0% | |
ACTTTCTTCACAAGTGGAAT+TGG | + | chr3.2:65164987-65165006 | MS.gene99874:intron | 35.0% | |
AGACATAAATGAGAGATGAG+AGG | - | chr3.2:65161276-65161295 | None:intergenic | 35.0% | |
AGGAATGTTAATACATGGTC+AGG | + | chr3.2:65161178-65161197 | MS.gene99874:CDS | 35.0% | |
AGGCTTCTTTCTTTAATTGG+TGG | + | chr3.2:65162152-65162171 | MS.gene99874:CDS | 35.0% | |
AGTCCTTCTCAAAATATGGT+AGG | + | chr3.2:65162667-65162686 | MS.gene99874:intron | 35.0% | |
ATACACTTGGAATGCATATG+TGG | - | chr3.2:65163791-65163810 | None:intergenic | 35.0% | |
ATCATGGGTATAGTCTTCTT+TGG | - | chr3.2:65160856-65160875 | None:intergenic | 35.0% | |
CAAAACAACCAAGCCTTAAA+TGG | - | chr3.2:65164075-65164094 | None:intergenic | 35.0% | |
CAAATTCCATTTGTGCATGT+TGG | - | chr3.2:65161989-65162008 | None:intergenic | 35.0% | |
CAAGACGAGTAAAACCATAA+TGG | - | chr3.2:65161493-65161512 | None:intergenic | 35.0% | |
CAAGGCCTTTAATTGTCTTA+TGG | - | chr3.2:65161374-65161393 | None:intergenic | 35.0% | |
CACAAATGGAATTTGCAACA+AGG | + | chr3.2:65161994-65162013 | MS.gene99874:CDS | 35.0% | |
CTCATAGGGACAATATCTTT+AGG | - | chr3.2:65164849-65164868 | None:intergenic | 35.0% | |
CTCATCTCTCATTTATGTCT+TGG | + | chr3.2:65161276-65161295 | MS.gene99874:CDS | 35.0% | |
CTGATAAGATAACAGGAAGA+GGG | + | chr3.2:65165048-65165067 | MS.gene99874:intron | 35.0% | |
CTTCATGAAGTTGTGTTGTA+AGG | - | chr3.2:65161141-65161160 | None:intergenic | 35.0% | |
CTTTGTCCAAAAACCTGAAT+TGG | - | chr3.2:65164392-65164411 | None:intergenic | 35.0% | |
GAAACTCATGTAGATCTGAA+GGG | - | chr3.2:65162420-65162439 | None:intergenic | 35.0% | |
GAAATCAACAGTTCCATCAT+GGG | - | chr3.2:65160871-65160890 | None:intergenic | 35.0% | |
GACAATAATAAACCAGCAGT+AGG | - | chr3.2:65162268-65162287 | None:intergenic | 35.0% | |
GACATAAATGAGAGATGAGA+GGG | - | chr3.2:65161275-65161294 | None:intergenic | 35.0% | |
GCACCAAAAGTTGAGATATT+TGG | - | chr3.2:65162091-65162110 | None:intergenic | 35.0% | |
GGAATGTTAATACATGGTCA+GGG | + | chr3.2:65161179-65161198 | MS.gene99874:CDS | 35.0% | |
GGGACTAAATTGATAGAAGA+TGG | + | chr3.2:65162688-65162707 | MS.gene99874:intron | 35.0% | |
GTCCTTCTCAAAATATGGTA+GGG | + | chr3.2:65162668-65162687 | MS.gene99874:intron | 35.0% | |
GTGCCTTAATTGCAACTTTA+GGG | + | chr3.2:65162194-65162213 | MS.gene99874:CDS | 35.0% | |
GTTTGGATAACACCAATTCT+TGG | + | chr3.2:65161205-65161224 | MS.gene99874:CDS | 35.0% | |
TACATTGCAGATTCTTACCT+GGG | + | chr3.2:65161232-65161251 | MS.gene99874:CDS | 35.0% | |
TACTGCATAAGCAATTGCAA+TGG | - | chr3.2:65164781-65164800 | None:intergenic | 35.0% | |
TAGTGACCAATCATTCAAGT+CGG | - | chr3.2:65163678-65163697 | None:intergenic | 35.0% | |
TATAGTTACACGCATAGGAT+AGG | + | chr3.2:65163808-65163827 | MS.gene99874:intron | 35.0% | |
TATGCGTGTAACTATACACT+TGG | - | chr3.2:65163804-65163823 | None:intergenic | 35.0% | |
TCCTCATGAGAAAGAGTTAA+AGG | + | chr3.2:65162132-65162151 | MS.gene99874:CDS | 35.0% | |
TGAAACTCATGTAGATCTGA+AGG | - | chr3.2:65162421-65162440 | None:intergenic | 35.0% | |
TGAAGTAATGTGATTCCTCT+CGG | - | chr3.2:65164723-65164742 | None:intergenic | 35.0% | |
TGAGTGCCTGTTTAAATTCA+CGG | - | chr3.2:65162904-65162923 | None:intergenic | 35.0% | |
TGGGCCAAGACATTAAAAAT+GGG | - | chr3.2:65163080-65163099 | None:intergenic | 35.0% | |
TTAACGCTGCTATGTTCTTA+AGG | - | chr3.2:65161446-65161465 | None:intergenic | 35.0% | |
TTACATTGCAGATTCTTACC+TGG | + | chr3.2:65161231-65161250 | MS.gene99874:CDS | 35.0% | |
TTGAAACCAACATGCACAAA+TGG | + | chr3.2:65161980-65161999 | MS.gene99874:CDS | 35.0% | |
TTGCTTAATTAACAAGGGTG+GGG | + | chr3.2:65163141-65163160 | MS.gene99874:intron | 35.0% | |
TTTGTGGGGGTGATAAATAA+TGG | + | chr3.2:65162940-65162959 | MS.gene99874:intron | 35.0% | |
! | AACTTGCATCGTTCTTCTTT+TGG | - | chr3.2:65163638-65163657 | None:intergenic | 35.0% |
! | CTTTTGGTAGATAGACGAAA+TGG | - | chr3.2:65163622-65163641 | None:intergenic | 35.0% |
! | GTATGAAGCATTTGAAAGGA+TGG | + | chr3.2:65161081-65161100 | MS.gene99874:CDS | 35.0% |
! | TTTGGGACCATAAAATTGGA+TGG | + | chr3.2:65162968-65162987 | MS.gene99874:intron | 35.0% |
!! | AGAAGCACTTTGTGTTCAAA+TGG | + | chr3.2:65165220-65165239 | MS.gene99874:CDS | 35.0% |
!! | CTTTGGTTACCTCATTTTTG+TGG | + | chr3.2:65161815-65161834 | MS.gene99874:intron | 35.0% |
!!! | GGATTTTAAAATCAGGACCA+AGG | - | chr3.2:65164599-65164618 | None:intergenic | 35.0% |
!!! | GTGGCTACACATTTTTTTAG+AGG | - | chr3.2:65163426-65163445 | None:intergenic | 35.0% |
ACACTTGCTTACCTCAAAGT+TGG | - | chr3.2:65162490-65162509 | None:intergenic | 40.0% | |
ACGAAAAACCGGTCATACAT+TGG | - | chr3.2:65164672-65164691 | None:intergenic | 40.0% | |
ACTACCTTAGACAGAAACCT+TGG | + | chr3.2:65164579-65164598 | MS.gene99874:intron | 40.0% | |
ATCACTGTGCCACAAAAATG+AGG | - | chr3.2:65161827-65161846 | None:intergenic | 40.0% | |
ATCCAAAACTGGGAAATGGA+AGG | + | chr3.2:65160911-65160930 | MS.gene99874:CDS | 40.0% | |
CAATTGCAATGGCTATGATC+TGG | - | chr3.2:65164770-65164789 | None:intergenic | 40.0% | |
CTACACAGCACTTTACACAA+TGG | + | chr3.2:65162042-65162061 | MS.gene99874:CDS | 40.0% | |
CTATGGAGTTGCATCAAACT+TGG | + | chr3.2:65161108-65161127 | MS.gene99874:CDS | 40.0% | |
CTTGTCTTTGGCATGCAAAA+TGG | - | chr3.2:65163756-65163775 | None:intergenic | 40.0% | |
GAAGTAATGTGATTCCTCTC+GGG | - | chr3.2:65164722-65164741 | None:intergenic | 40.0% | |
GACATCTAAAAGTCCTGCTA+AGG | + | chr3.2:65162336-65162355 | MS.gene99874:CDS | 40.0% | |
GCAATGTAAGCACCAAGAAT+TGG | - | chr3.2:65161220-65161239 | None:intergenic | 40.0% | |
GCACTTTACACAATGGCAAT+TGG | + | chr3.2:65162049-65162068 | MS.gene99874:CDS | 40.0% | |
GCACTTTGTGTTCAAATGGA+AGG | + | chr3.2:65165224-65165243 | MS.gene99874:CDS | 40.0% | |
GCCTTTAACTCTTTCTCATG+AGG | - | chr3.2:65162136-65162155 | None:intergenic | 40.0% | |
GGAAATCAACAGTTCCATCA+TGG | - | chr3.2:65160872-65160891 | None:intergenic | 40.0% | |
GGAACAACTTTCTTCACAAG+TGG | + | chr3.2:65164981-65165000 | MS.gene99874:intron | 40.0% | |
GGCCAAGACATTAAAAATGG+GGG | - | chr3.2:65163078-65163097 | None:intergenic | 40.0% | |
GGGCCAAGACATTAAAAATG+GGG | - | chr3.2:65163079-65163098 | None:intergenic | 40.0% | |
GGTGCCTTAATTGCAACTTT+AGG | + | chr3.2:65162193-65162212 | MS.gene99874:CDS | 40.0% | |
GTAGAGTTTGCGTTCCATTA+TGG | + | chr3.2:65161476-65161495 | MS.gene99874:intron | 40.0% | |
GTGGACAAATTAGCTCCAAT+TGG | - | chr3.2:65161639-65161658 | None:intergenic | 40.0% | |
GTGGGCCAAGACATTAAAAA+TGG | - | chr3.2:65163081-65163100 | None:intergenic | 40.0% | |
GTGTGTATTCTCTACTTCAG+TGG | - | chr3.2:65163445-65163464 | None:intergenic | 40.0% | |
GTTTGATGCAACTCCATAGA+AGG | - | chr3.2:65161107-65161126 | None:intergenic | 40.0% | |
TAAACAGGCACTCATTCTAG+TGG | + | chr3.2:65162910-65162929 | MS.gene99874:intron | 40.0% | |
TAATTCCTCTACACGTCACA+GGG | + | chr3.2:65161920-65161939 | MS.gene99874:intron | 40.0% | |
TCAACTTTGGATGCATCTCT+TGG | + | chr3.2:65165251-65165270 | MS.gene99874:CDS | 40.0% | |
TCCTTGGTATGCTCCTAATA+TGG | + | chr3.2:65164493-65164512 | MS.gene99874:intron | 40.0% | |
TCTATCACACTCCAACTTTG+AGG | + | chr3.2:65162476-65162495 | MS.gene99874:CDS | 40.0% | |
TCTTGGCTTACAAGTATGAG+AGG | + | chr3.2:65165268-65165287 | MS.gene99874:CDS | 40.0% | |
TGTAGATCTGAAGGGTTACT+AGG | - | chr3.2:65162412-65162431 | None:intergenic | 40.0% | |
TGTCTTATGGTCCAAACAAG+TGG | - | chr3.2:65161361-65161380 | None:intergenic | 40.0% | |
TTAATTCCTCTACACGTCAC+AGG | + | chr3.2:65161919-65161938 | MS.gene99874:intron | 40.0% | |
TTCACAAGTGGAATTGGTGT+TGG | + | chr3.2:65164993-65165012 | MS.gene99874:intron | 40.0% | |
TTCCATCCAAAACTGGGAAA+TGG | + | chr3.2:65160907-65160926 | MS.gene99874:CDS | 40.0% | |
TTTGAAAGGATGGCCTTCTA+TGG | + | chr3.2:65161091-65161110 | MS.gene99874:CDS | 40.0% | |
TTTGTCCCACCTTGAATTGA+TGG | + | chr3.2:65161762-65161781 | MS.gene99874:intron | 40.0% | |
! | AAGGCTTGTGCTTTTCTTGT+TGG | + | chr3.2:65160930-65160949 | MS.gene99874:CDS | 40.0% |
! | ACCATATTAGGAGCATACCA+AGG | - | chr3.2:65164497-65164516 | None:intergenic | 40.0% |
! | ACTGATTCCAAGCACCATTT+GGG | + | chr3.2:65164524-65164543 | MS.gene99874:intron | 40.0% |
! | AGCATATCCCATTTAAGGCT+TGG | + | chr3.2:65164064-65164083 | MS.gene99874:intron | 40.0% |
! | CAAGTTGTTTCCTCCATATG+AGG | + | chr3.2:65163652-65163671 | MS.gene99874:intron | 40.0% |
! | CAGGGTATGAAGCATTTGAA+AGG | + | chr3.2:65161077-65161096 | MS.gene99874:intron | 40.0% |
! | GCAGATGTTTTCAATGCCAT+TGG | + | chr3.2:65164909-65164928 | MS.gene99874:intron | 40.0% |
! | TCACAAGTGGAATTGGTGTT+GGG | + | chr3.2:65164994-65165013 | MS.gene99874:intron | 40.0% |
!! | AGTGTTGATTTGTGCCCAAA+TGG | - | chr3.2:65164541-65164560 | None:intergenic | 40.0% |
!! | GATGGAACTGTTGATTTCCA+CGG | + | chr3.2:65160873-65160892 | MS.gene99874:CDS | 40.0% |
!! | GTCCCCCATTTTTAATGTCT+TGG | + | chr3.2:65163073-65163092 | MS.gene99874:intron | 40.0% |
!! | GTCCCTACCATATTTTGAGA+AGG | - | chr3.2:65162673-65162692 | None:intergenic | 40.0% |
!! | TAAGTTAAGTTGACTGCCTG+TGG | - | chr3.2:65163103-65163122 | None:intergenic | 40.0% |
!!! | GCTGCTGGGATTTTAAAATC+AGG | - | chr3.2:65164606-65164625 | None:intergenic | 40.0% |
!!! | TTCCATTTCCCAGTTTTGGA+TGG | - | chr3.2:65160912-65160931 | None:intergenic | 40.0% |
AAAATCCCAGCAGCATCTCT+AGG | + | chr3.2:65164612-65164631 | MS.gene99874:intron | 45.0% | |
AATGGGGGACACGTAATCTT+AGG | - | chr3.2:65163063-65163082 | None:intergenic | 45.0% | |
AGGACCAAGGTTTCTGTCTA+AGG | - | chr3.2:65164586-65164605 | None:intergenic | 45.0% | |
ATACATGGTCAGGGTCTGTT+TGG | + | chr3.2:65161188-65161207 | MS.gene99874:CDS | 45.0% | |
ATTTGTGCCCAAATGGTGCT+TGG | - | chr3.2:65164534-65164553 | None:intergenic | 45.0% | |
CCAAGACTTTGCATGTCTTC+AGG | - | chr3.2:65164963-65164982 | None:intergenic | 45.0% | |
CCTGAAGACATGCAAAGTCT+TGG | + | chr3.2:65164960-65164979 | MS.gene99874:intron | 45.0% | |
CTGCTGTTCCATCCAAAACT+GGG | + | chr3.2:65160901-65160920 | MS.gene99874:CDS | 45.0% | |
CTTCTTGAGGAACCAGTTGT+AGG | - | chr3.2:65164432-65164451 | None:intergenic | 45.0% | |
GAAGAGGGACTAGAAAGAGT+TGG | + | chr3.2:65165063-65165082 | MS.gene99874:intron | 45.0% | |
GAAGGAGCAAAGCTAATCCT+TGG | + | chr3.2:65164477-65164496 | MS.gene99874:CDS | 45.0% | |
GCATGAACGGTACGAAAAAC+CGG | - | chr3.2:65164683-65164702 | None:intergenic | 45.0% | |
GGACACGTAATCTTAGGACA+CGG | - | chr3.2:65163057-65163076 | None:intergenic | 45.0% | |
GGATATGGTATTCCTACTGC+TGG | + | chr3.2:65162253-65162272 | MS.gene99874:CDS | 45.0% | |
GTCTTTGGCATGCAAAATGG+TGG | - | chr3.2:65163753-65163772 | None:intergenic | 45.0% | |
TACACAATGGCAATTGGTGC+AGG | + | chr3.2:65162055-65162074 | MS.gene99874:CDS | 45.0% | |
TATCCCACGAGTGCAATTTG+TGG | - | chr3.2:65161658-65161677 | None:intergenic | 45.0% | |
TCATTCAAGTCGGCCTCATA+TGG | - | chr3.2:65163668-65163687 | None:intergenic | 45.0% | |
TCTCAGTGCCAATGTATGAC+CGG | + | chr3.2:65164661-65164680 | MS.gene99874:intron | 45.0% | |
TGTCCACAAATTGCACTCGT+GGG | + | chr3.2:65161652-65161671 | MS.gene99874:intron | 45.0% | |
TTAGGATGGGGACTTGGATA+TGG | + | chr3.2:65162238-65162257 | MS.gene99874:CDS | 45.0% | |
TTGTCCACAAATTGCACTCG+TGG | + | chr3.2:65161651-65161670 | MS.gene99874:intron | 45.0% | |
! | AGCCTTCCATTTCCCAGTTT+TGG | - | chr3.2:65160916-65160935 | None:intergenic | 45.0% |
! | GAGAATTTAGGATGGGGACT+TGG | + | chr3.2:65162232-65162251 | MS.gene99874:CDS | 45.0% |
! | TAACAAGGGTGGGGTATCAA+GGG | + | chr3.2:65163150-65163169 | MS.gene99874:intron | 45.0% |
! | TGTCATTGGTGCTCTTCTTG+AGG | - | chr3.2:65164445-65164464 | None:intergenic | 45.0% |
! | TTAACAAGGGTGGGGTATCA+AGG | + | chr3.2:65163149-65163168 | MS.gene99874:intron | 45.0% |
!! | ATGAGGCCGACTTGAATGAT+TGG | + | chr3.2:65163669-65163688 | MS.gene99874:intron | 45.0% |
!! | CACTGATTCCAAGCACCATT+TGG | + | chr3.2:65164523-65164542 | MS.gene99874:intron | 45.0% |
!! | TCTAGTGGTAGTGGCTTTGT+GGG | + | chr3.2:65162925-65162944 | MS.gene99874:intron | 45.0% |
!! | TTAAGTTGACTGCCTGTGGT+GGG | - | chr3.2:65163099-65163118 | None:intergenic | 45.0% |
!! | TTCTAGTGGTAGTGGCTTTG+TGG | + | chr3.2:65162924-65162943 | MS.gene99874:intron | 45.0% |
!! | TAATTAATTGTTTATATTAT+GGG | + | chr3.2:65161005-65161024 | MS.gene99874:intron | 5.0% |
!! | TTAATTAATTGTTTATATTA+TGG | + | chr3.2:65161004-65161023 | MS.gene99874:intron | 5.0% |
ACAATGGCAATTGGTGCAGG+TGG | + | chr3.2:65162058-65162077 | MS.gene99874:CDS | 50.0% | |
ATTCTTACCTGGGTCGCTTC+TGG | + | chr3.2:65161242-65161261 | MS.gene99874:CDS | 50.0% | |
CACTGAGAGCAGCATGGATA+GGG | - | chr3.2:65164649-65164668 | None:intergenic | 50.0% | |
CCTGCTGTTCCATCCAAAAC+TGG | + | chr3.2:65160900-65160919 | MS.gene99874:CDS | 50.0% | |
GATCCCCTACAATCGTTGCA+CGG | + | chr3.2:65165299-65165318 | MS.gene99874:CDS | 50.0% | |
GGCACTCATTCTAGTGGTAG+TGG | + | chr3.2:65162916-65162935 | MS.gene99874:intron | 50.0% | |
GTAATGTGATTCCTCTCGGG+TGG | - | chr3.2:65164719-65164738 | None:intergenic | 50.0% | |
TCATTCCCTGTGACGTGTAG+AGG | - | chr3.2:65161928-65161947 | None:intergenic | 50.0% | |
TTAATGTCTTGGCCCACCAC+AGG | + | chr3.2:65163084-65163103 | MS.gene99874:intron | 50.0% | |
TTCAAGTCGGCCTCATATGG+AGG | - | chr3.2:65163665-65163684 | None:intergenic | 50.0% | |
!! | CTAGTGGTAGTGGCTTTGTG+GGG | + | chr3.2:65162926-65162945 | MS.gene99874:intron | 50.0% |
!! | GTTAAGTTGACTGCCTGTGG+TGG | - | chr3.2:65163100-65163119 | None:intergenic | 50.0% |
!! | TAGTGGTAGTGGCTTTGTGG+GGG | + | chr3.2:65162927-65162946 | MS.gene99874:intron | 50.0% |
!!! | CCAGTTTTGGATGGAACAGC+AGG | - | chr3.2:65160903-65160922 | None:intergenic | 50.0% |
AAGCTGCCTAGAGATGCTGC+TGG | - | chr3.2:65164621-65164640 | None:intergenic | 55.0% | |
AGCTGCCTAGAGATGCTGCT+GGG | - | chr3.2:65164620-65164639 | None:intergenic | 55.0% | |
ATGGAACAGCAGGTTTGCCG+TGG | - | chr3.2:65160893-65160912 | None:intergenic | 55.0% | |
CCGTTCATGCGCCAGAAAAC+CGG | + | chr3.2:65164693-65164712 | MS.gene99874:intron | 55.0% | |
GCACTGAGAGCAGCATGGAT+AGG | - | chr3.2:65164650-65164669 | None:intergenic | 55.0% | |
TGAAAGTCCAGAAGCGACCC+AGG | - | chr3.2:65161252-65161271 | None:intergenic | 55.0% | |
TGCGCCGTGCAACGATTGTA+GGG | - | chr3.2:65165306-65165325 | None:intergenic | 55.0% | |
! | CATTGGCACTGAGAGCAGCA+TGG | - | chr3.2:65164655-65164674 | None:intergenic | 55.0% |
!! | CCGGTTTTCTGGCGCATGAA+CGG | - | chr3.2:65164696-65164715 | None:intergenic | 55.0% |
CTGCGCCGTGCAACGATTGT+AGG | - | chr3.2:65165307-65165326 | None:intergenic | 60.0% | |
GCGCCGTGCAACGATTGTAG+GGG | - | chr3.2:65165305-65165324 | None:intergenic | 60.0% | |
TGTGATTCCTCTCGGGTGGC+CGG | - | chr3.2:65164715-65164734 | None:intergenic | 60.0% | |
! | AGGGTGGGGTATCAAGGGTG+TGG | + | chr3.2:65163155-65163174 | MS.gene99874:intron | 60.0% |
CAGAAAACCGGCCACCCGAG+AGG | + | chr3.2:65164705-65164724 | MS.gene99874:intron | 65.0% | |
GTTGCACGGCGCAGTGCCAT+GGG | + | chr3.2:65165313-65165332 | MS.gene99874:CDS | 65.0% | |
TTGCACGGCGCAGTGCCATG+GGG | + | chr3.2:65165314-65165333 | MS.gene99874:CDS | 65.0% | |
!! | CTCTCGGGTGGCCGGTTTTC+TGG | - | chr3.2:65164707-65164726 | None:intergenic | 65.0% |
CGTTGCACGGCGCAGTGCCA+TGG | + | chr3.2:65165312-65165331 | MS.gene99874:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 65160846 | 65165344 | 65160846 | ID=MS.gene99874 |
chr3.2 | mRNA | 65160846 | 65165344 | 65160846 | ID=MS.gene99874.t1;Parent=MS.gene99874 |
chr3.2 | exon | 65160846 | 65160951 | 65160846 | ID=MS.gene99874.t1.exon1;Parent=MS.gene99874.t1 |
chr3.2 | CDS | 65160846 | 65160951 | 65160846 | ID=cds.MS.gene99874.t1;Parent=MS.gene99874.t1 |
chr3.2 | exon | 65161080 | 65161297 | 65161080 | ID=MS.gene99874.t1.exon2;Parent=MS.gene99874.t1 |
chr3.2 | CDS | 65161080 | 65161297 | 65161080 | ID=cds.MS.gene99874.t1;Parent=MS.gene99874.t1 |
chr3.2 | exon | 65161941 | 65162497 | 65161941 | ID=MS.gene99874.t1.exon3;Parent=MS.gene99874.t1 |
chr3.2 | CDS | 65161941 | 65162497 | 65161941 | ID=cds.MS.gene99874.t1;Parent=MS.gene99874.t1 |
chr3.2 | exon | 65164398 | 65164498 | 65164398 | ID=MS.gene99874.t1.exon4;Parent=MS.gene99874.t1 |
chr3.2 | CDS | 65164398 | 65164498 | 65164398 | ID=cds.MS.gene99874.t1;Parent=MS.gene99874.t1 |
chr3.2 | exon | 65165184 | 65165344 | 65165184 | ID=MS.gene99874.t1.exon5;Parent=MS.gene99874.t1 |
chr3.2 | CDS | 65165184 | 65165344 | 65165184 | ID=cds.MS.gene99874.t1;Parent=MS.gene99874.t1 |
Gene Sequence |
Protein sequence |