Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023978.01.T01 | XP_003631025.2 | 93.443 | 366 | 8 | 7 | 1 | 362 | 1 | 354 | 0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023978.01.T01 | O49500 | 46.429 | 112 | 59 | 1 | 244 | 355 | 550 | 660 | 2.62E-27 | 116 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023978.01.T01 | G7LCD4 | 93.443 | 366 | 8 | 7 | 1 | 362 | 1 | 354 | 0.0 | 686 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048307.01 | MsG0480023978.01 | 0.805526 | 1.279172e-49 | 6.782697e-47 |
| MsG0180000126.01 | MsG0480023978.01 | 0.810037 | 1.406345e-50 | 8.389024e-48 |
| MsG0180000218.01 | MsG0480023978.01 | -0.807803 | 4.228279e-50 | 2.377568e-47 |
| MsG0180001002.01 | MsG0480023978.01 | 0.840325 | 9.308405e-58 | 1.321172e-54 |
| MsG0180001020.01 | MsG0480023978.01 | 0.813718 | 2.221667e-51 | 1.461931e-48 |
| MsG0180001130.01 | MsG0480023978.01 | 0.800676 | 1.288979e-48 | 6.038172e-46 |
| MsG0180001311.01 | MsG0480023978.01 | 0.828182 | 1.036532e-54 | 1.022629e-51 |
| MsG0180002799.01 | MsG0480023978.01 | 0.800927 | 1.145670e-48 | 5.401278e-46 |
| MsG0180003357.01 | MsG0480023978.01 | 0.803753 | 2.999522e-49 | 1.519577e-46 |
| MsG0180003807.01 | MsG0480023978.01 | 0.823422 | 1.397366e-53 | 1.202537e-50 |
| MsG0180003885.01 | MsG0480023978.01 | 0.815424 | 9.310773e-52 | 6.416841e-49 |
| MsG0180004493.01 | MsG0480023978.01 | 0.801394 | 9.194007e-49 | 4.385707e-46 |
| MsG0180004500.01 | MsG0480023978.01 | 0.815789 | 7.723037e-52 | 5.376388e-49 |
| MsG0180005220.01 | MsG0480023978.01 | 0.802558 | 5.298658e-49 | 2.603396e-46 |
| MsG0180005240.01 | MsG0480023978.01 | 0.814403 | 1.568601e-51 | 1.051546e-48 |
| MsG0180005292.01 | MsG0480023978.01 | 0.805569 | 1.253138e-49 | 6.651921e-47 |
| MsG0180006104.01 | MsG0480023978.01 | 0.860066 | 2.676873e-63 | 7.225262e-60 |
| MsG0180006243.01 | MsG0480023978.01 | 0.810094 | 1.367359e-50 | 8.168152e-48 |
| MsG0280006309.01 | MsG0480023978.01 | 0.800605 | 1.332386e-48 | 6.230264e-46 |
| MsG0280010598.01 | MsG0480023978.01 | 0.810980 | 8.798750e-51 | 5.381784e-48 |
| MsG0280010599.01 | MsG0480023978.01 | 0.813762 | 2.171859e-51 | 1.430813e-48 |
| MsG0280010916.01 | MsG0480023978.01 | 0.815969 | 7.038248e-52 | 4.923712e-49 |
| MsG0280011272.01 | MsG0480023978.01 | -0.829772 | 4.269912e-55 | 4.413528e-52 |
| MsG0380014727.01 | MsG0480023978.01 | 0.800926 | 1.145733e-48 | 5.401508e-46 |
| MsG0380014866.01 | MsG0480023978.01 | 0.820943 | 5.250701e-53 | 4.213559e-50 |
| MsG0480019711.01 | MsG0480023978.01 | 0.814112 | 1.818183e-51 | 1.209236e-48 |
| MsG0480021492.01 | MsG0480023978.01 | 0.803810 | 2.918796e-49 | 1.480825e-46 |
| MsG0480021870.01 | MsG0480023978.01 | 0.818010 | 2.450230e-52 | 1.812528e-49 |
| MsG0480023251.01 | MsG0480023978.01 | 0.831543 | 1.573142e-55 | 1.712580e-52 |
| MsG0480023381.01 | MsG0480023978.01 | 0.822313 | 2.532645e-53 | 2.112342e-50 |
| MsG0480023670.01 | MsG0480023978.01 | 0.810991 | 8.753010e-51 | 5.355296e-48 |
| MsG0480023978.01 | MsG0580024650.01 | -0.812704 | 3.708770e-51 | 2.374653e-48 |
| MsG0480023978.01 | MsG0580024695.01 | 0.816835 | 4.506741e-52 | 3.228254e-49 |
| MsG0480023978.01 | MsG0580024790.01 | -0.801047 | 1.082370e-48 | 5.118655e-46 |
| MsG0480023978.01 | MsG0580024829.01 | 0.825111 | 5.601810e-54 | 5.058699e-51 |
| MsG0480023978.01 | MsG0580024833.01 | 0.818456 | 1.942137e-52 | 1.454606e-49 |
| MsG0480023978.01 | MsG0580024889.01 | 0.817432 | 3.308479e-52 | 2.409086e-49 |
| MsG0480023978.01 | MsG0580025625.01 | 0.814768 | 1.301985e-51 | 8.813769e-49 |
| MsG0480023978.01 | MsG0580029065.01 | 0.827312 | 1.677052e-54 | 1.613172e-51 |
| MsG0480023978.01 | MsG0580029236.01 | 0.801084 | 1.063656e-48 | 5.034826e-46 |
| MsG0480023978.01 | MsG0580029919.01 | 0.834090 | 3.663331e-56 | 4.302173e-53 |
| MsG0480023978.01 | MsG0680033465.01 | 0.853530 | 2.248380e-61 | 4.873145e-58 |
| MsG0480023978.01 | MsG0680034235.01 | 0.829300 | 5.562052e-55 | 5.670677e-52 |
| MsG0480023978.01 | MsG0680034597.01 | 0.801746 | 7.783969e-49 | 3.746313e-46 |
| MsG0480023978.01 | MsG0780036117.01 | 0.802051 | 6.738913e-49 | 3.268716e-46 |
| MsG0480023978.01 | MsG0780038644.01 | 0.806751 | 7.063524e-50 | 3.864755e-47 |
| MsG0480023978.01 | MsG0780039218.01 | 0.813475 | 2.511561e-51 | 1.641862e-48 |
| MsG0480023978.01 | MsG0780040176.01 | 0.808433 | 3.104962e-50 | 1.775153e-47 |
| MsG0480023978.01 | MsG0780041187.01 | 0.822356 | 2.474837e-53 | 2.066701e-50 |
| MsG0480023978.01 | MsG0780041482.01 | 0.812348 | 4.434777e-51 | 2.813011e-48 |
| MsG0480023978.01 | MsG0780041734.01 | -0.800843 | 1.191406e-48 | 5.604924e-46 |
| MsG0480023978.01 | MsG0880043407.01 | 0.804284 | 2.325593e-49 | 1.194350e-46 |
| MsG0480023978.01 | MsG0880047285.01 | -0.819400 | 1.184690e-52 | 9.106664e-50 |
| MsG0480023978.01 | MsG0880047519.01 | 0.838495 | 2.780282e-57 | 3.730298e-54 |
| MsG0380015745.01 | MsG0480023978.01 | 0.834497 | 2.896218e-56 | 3.443213e-53 |
| MsG0380016740.01 | MsG0480023978.01 | 0.829941 | 3.884236e-55 | 4.034090e-52 |
| MsG0380017293.01 | MsG0480023978.01 | 0.815141 | 1.076398e-51 | 7.360489e-49 |
| MsG0380017322.01 | MsG0480023978.01 | 0.808404 | 3.149460e-50 | 1.799215e-47 |
| MsG0280006481.01 | MsG0480023978.01 | 0.812631 | 3.846872e-51 | 2.458407e-48 |
| MsG0280006634.01 | MsG0480023978.01 | 0.823721 | 1.188980e-53 | 1.032142e-50 |
| MsG0280006669.01 | MsG0480023978.01 | 0.834546 | 2.815084e-56 | 3.351749e-53 |
| MsG0280006896.01 | MsG0480023978.01 | 0.810034 | 1.408938e-50 | 8.403824e-48 |
| MsG0280007118.01 | MsG0480023978.01 | 0.802083 | 6.639241e-49 | 3.222909e-46 |
| MsG0280007165.01 | MsG0480023978.01 | -0.833047 | 6.675046e-56 | 7.598466e-53 |
| MsG0280007756.01 | MsG0480023978.01 | 0.872438 | 3.179292e-67 | 1.330541e-63 |
| MsG0280008112.01 | MsG0480023978.01 | 0.801890 | 7.273131e-49 | 3.513530e-46 |
| MsG0280008113.01 | MsG0480023978.01 | 0.805508 | 1.290291e-49 | 6.838387e-47 |
| MsG0280008932.01 | MsG0480023978.01 | 0.813437 | 2.561331e-51 | 1.672633e-48 |
| MsG0280009157.01 | MsG0480023978.01 | 0.811336 | 7.367669e-51 | 4.548090e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023978.01.T01 | MTR_8g106240 | 93.443 | 366 | 8 | 7 | 1 | 362 | 1 | 354 | 0.0 | 686 |
| MsG0480023978.01.T01 | MTR_8g106240 | 92.308 | 273 | 5 | 7 | 1 | 269 | 1 | 261 | 1.05e-175 | 489 |
| MsG0480023978.01.T01 | MTR_8g106240 | 91.250 | 240 | 5 | 7 | 1 | 236 | 1 | 228 | 2.52e-147 | 416 |
| MsG0480023978.01.T01 | MTR_6g082620 | 56.604 | 371 | 122 | 10 | 15 | 361 | 4 | 359 | 1.18e-121 | 355 |
| MsG0480023978.01.T01 | MTR_1g019200 | 44.262 | 122 | 66 | 2 | 234 | 355 | 583 | 702 | 1.65e-30 | 123 |
| MsG0480023978.01.T01 | MTR_3g108808 | 44.186 | 129 | 65 | 3 | 236 | 358 | 405 | 532 | 8.73e-29 | 117 |
| MsG0480023978.01.T01 | MTR_1g066430 | 45.217 | 115 | 58 | 3 | 242 | 355 | 583 | 693 | 1.19e-27 | 114 |
| MsG0480023978.01.T01 | MTR_2g078450 | 43.590 | 117 | 59 | 1 | 251 | 360 | 401 | 517 | 1.29e-26 | 110 |
| MsG0480023978.01.T01 | MTR_1g009680 | 38.514 | 148 | 68 | 3 | 232 | 356 | 323 | 470 | 7.12e-26 | 108 |
| MsG0480023978.01.T01 | MTR_7g100950 | 43.182 | 132 | 69 | 4 | 225 | 355 | 419 | 545 | 9.03e-26 | 108 |
| MsG0480023978.01.T01 | MTR_7g100950 | 43.939 | 132 | 66 | 4 | 225 | 355 | 419 | 543 | 1.36e-25 | 108 |
| MsG0480023978.01.T01 | MTR_2g078440 | 47.664 | 107 | 52 | 3 | 251 | 357 | 194 | 296 | 2.37e-24 | 102 |
| MsG0480023978.01.T01 | MTR_1g066400 | 45.872 | 109 | 54 | 3 | 248 | 355 | 421 | 525 | 6.30e-24 | 103 |
| MsG0480023978.01.T01 | MTR_4g085630 | 43.590 | 117 | 65 | 1 | 244 | 360 | 441 | 556 | 1.26e-23 | 102 |
| MsG0480023978.01.T01 | MTR_2g076290 | 37.931 | 116 | 61 | 3 | 251 | 357 | 214 | 327 | 2.26e-19 | 88.2 |
| MsG0480023978.01.T01 | MTR_3g025940 | 39.175 | 97 | 58 | 1 | 261 | 357 | 348 | 443 | 1.73e-18 | 86.7 |
| MsG0480023978.01.T01 | MTR_8g037150 | 34.694 | 98 | 63 | 1 | 261 | 358 | 144 | 240 | 1.18e-16 | 79.0 |
| MsG0480023978.01.T01 | MTR_3g088100 | 39.000 | 100 | 50 | 3 | 264 | 359 | 111 | 203 | 1.37e-15 | 75.1 |
| MsG0480023978.01.T01 | MTR_4g065670 | 35.714 | 112 | 69 | 2 | 251 | 360 | 132 | 242 | 1.62e-15 | 75.9 |
| MsG0480023978.01.T01 | MTR_1g114240 | 29.375 | 160 | 97 | 5 | 208 | 360 | 178 | 328 | 2.58e-15 | 76.6 |
| MsG0480023978.01.T01 | MTR_5g016960 | 31.579 | 133 | 87 | 4 | 225 | 356 | 464 | 593 | 2.86e-15 | 77.4 |
| MsG0480023978.01.T01 | MTR_4g065670 | 35.780 | 109 | 67 | 2 | 254 | 360 | 142 | 249 | 3.19e-15 | 75.1 |
| MsG0480023978.01.T01 | MTR_1g114240 | 35.455 | 110 | 66 | 2 | 251 | 360 | 230 | 334 | 3.84e-15 | 75.9 |
| MsG0480023978.01.T01 | MTR_5g079050 | 40.278 | 72 | 42 | 1 | 284 | 355 | 284 | 354 | 7.19e-15 | 75.5 |
| MsG0480023978.01.T01 | MTR_5g078900 | 38.356 | 73 | 44 | 1 | 284 | 356 | 284 | 355 | 2.59e-14 | 73.9 |
| MsG0480023978.01.T01 | MTR_8g036640 | 32.990 | 97 | 63 | 2 | 252 | 348 | 134 | 228 | 3.16e-13 | 69.7 |
| MsG0480023978.01.T01 | MTR_2g076240 | 33.566 | 143 | 51 | 6 | 224 | 357 | 71 | 178 | 1.08e-12 | 66.6 |
| MsG0480023978.01.T01 | MTR_5g016920 | 29.012 | 162 | 85 | 7 | 199 | 356 | 7 | 142 | 1.55e-12 | 65.1 |
| MsG0480023978.01.T01 | MTR_5g016980 | 37.349 | 83 | 48 | 3 | 281 | 361 | 254 | 334 | 5.58e-12 | 66.6 |
| MsG0480023978.01.T01 | MTR_5g016940 | 38.356 | 73 | 39 | 1 | 284 | 356 | 275 | 341 | 1.75e-11 | 65.1 |
| MsG0480023978.01.T01 | MTR_3g088080 | 46.667 | 45 | 24 | 0 | 312 | 356 | 36 | 80 | 7.27e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023978.01.T01 | AT1G73760 | 45.879 | 364 | 156 | 10 | 13 | 355 | 17 | 360 | 2.02e-87 | 268 |
| MsG0480023978.01.T01 | AT1G17970 | 36.198 | 384 | 196 | 12 | 8 | 361 | 3 | 367 | 3.06e-56 | 188 |
| MsG0480023978.01.T01 | AT1G73760 | 43.885 | 278 | 118 | 9 | 13 | 269 | 17 | 277 | 1.42e-50 | 171 |
| MsG0480023978.01.T01 | AT5G10650 | 40.476 | 126 | 71 | 1 | 234 | 355 | 391 | 516 | 1.73e-31 | 125 |
| MsG0480023978.01.T01 | AT5G10650 | 40.476 | 126 | 71 | 1 | 234 | 355 | 391 | 516 | 1.73e-31 | 125 |
| MsG0480023978.01.T01 | AT4G31450 | 40.458 | 131 | 69 | 2 | 233 | 355 | 360 | 489 | 3.79e-30 | 120 |
| MsG0480023978.01.T01 | AT4G31450 | 40.458 | 131 | 69 | 2 | 233 | 355 | 360 | 489 | 3.79e-30 | 120 |
| MsG0480023978.01.T01 | AT4G34040 | 46.429 | 112 | 59 | 1 | 244 | 355 | 550 | 660 | 2.67e-28 | 116 |
| MsG0480023978.01.T01 | AT2G15530 | 46.154 | 117 | 61 | 1 | 244 | 358 | 584 | 700 | 1.46e-27 | 114 |
| MsG0480023978.01.T01 | AT2G15530 | 46.154 | 117 | 61 | 1 | 244 | 358 | 584 | 700 | 1.46e-27 | 114 |
| MsG0480023978.01.T01 | AT2G15530 | 46.154 | 117 | 61 | 1 | 244 | 358 | 584 | 700 | 1.46e-27 | 114 |
| MsG0480023978.01.T01 | AT2G15530 | 46.154 | 117 | 61 | 1 | 244 | 358 | 584 | 700 | 1.46e-27 | 114 |
| MsG0480023978.01.T01 | AT2G15530 | 46.154 | 117 | 61 | 1 | 244 | 358 | 584 | 700 | 1.46e-27 | 114 |
| MsG0480023978.01.T01 | AT5G24870 | 33.696 | 184 | 109 | 3 | 185 | 355 | 326 | 509 | 1.53e-27 | 113 |
| MsG0480023978.01.T01 | AT5G24870 | 33.696 | 184 | 109 | 3 | 185 | 355 | 326 | 509 | 1.53e-27 | 113 |
| MsG0480023978.01.T01 | AT5G24870 | 33.696 | 184 | 109 | 3 | 185 | 355 | 326 | 509 | 1.53e-27 | 113 |
| MsG0480023978.01.T01 | AT2G15530 | 46.154 | 117 | 61 | 1 | 244 | 358 | 562 | 678 | 1.61e-27 | 114 |
| MsG0480023978.01.T01 | AT1G45180 | 42.748 | 131 | 72 | 2 | 225 | 355 | 458 | 585 | 1.14e-26 | 111 |
| MsG0480023978.01.T01 | AT5G42940 | 39.695 | 131 | 74 | 3 | 227 | 355 | 551 | 678 | 1.67e-26 | 111 |
| MsG0480023978.01.T01 | AT5G42940 | 39.695 | 131 | 74 | 3 | 227 | 355 | 551 | 678 | 1.67e-26 | 111 |
| MsG0480023978.01.T01 | AT1G45180 | 42.748 | 131 | 72 | 2 | 225 | 355 | 506 | 633 | 1.91e-26 | 111 |
| MsG0480023978.01.T01 | AT1G45180 | 42.748 | 131 | 72 | 2 | 225 | 355 | 506 | 633 | 1.91e-26 | 111 |
| MsG0480023978.01.T01 | AT1G45180 | 42.748 | 131 | 72 | 2 | 225 | 355 | 506 | 633 | 1.91e-26 | 111 |
| MsG0480023978.01.T01 | AT1G53190 | 37.681 | 138 | 76 | 4 | 229 | 358 | 351 | 486 | 3.20e-26 | 109 |
| MsG0480023978.01.T01 | AT1G53190 | 37.681 | 138 | 76 | 4 | 229 | 358 | 351 | 486 | 3.20e-26 | 109 |
| MsG0480023978.01.T01 | AT2G15530 | 45.614 | 114 | 60 | 1 | 244 | 355 | 584 | 697 | 2.53e-25 | 107 |
| MsG0480023978.01.T01 | AT3G15070 | 36.937 | 111 | 67 | 1 | 251 | 358 | 362 | 472 | 2.11e-22 | 98.6 |
| MsG0480023978.01.T01 | AT3G15070 | 36.937 | 111 | 67 | 1 | 251 | 358 | 362 | 472 | 2.11e-22 | 98.6 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 429 | 534 | 2.75e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 445 | 550 | 3.23e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 445 | 550 | 3.23e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 445 | 550 | 3.23e-20 | 92.4 |
| MsG0480023978.01.T01 | AT2G37150 | 45.872 | 109 | 55 | 3 | 248 | 355 | 482 | 587 | 3.81e-20 | 92.4 |
| MsG0480023978.01.T01 | AT3G63530 | 35.714 | 98 | 62 | 1 | 261 | 358 | 145 | 241 | 2.71e-16 | 78.2 |
| MsG0480023978.01.T01 | AT3G63530 | 35.714 | 98 | 62 | 1 | 261 | 358 | 145 | 241 | 2.71e-16 | 78.2 |
| MsG0480023978.01.T01 | AT1G36950 | 37.143 | 105 | 58 | 2 | 254 | 356 | 24 | 122 | 3.65e-16 | 77.4 |
| MsG0480023978.01.T01 | AT4G00070 | 38.144 | 97 | 52 | 2 | 254 | 348 | 88 | 178 | 7.40e-16 | 75.1 |
| MsG0480023978.01.T01 | AT3G47180 | 40.217 | 92 | 51 | 3 | 264 | 354 | 115 | 203 | 5.40e-15 | 73.6 |
| MsG0480023978.01.T01 | AT3G19910 | 33.000 | 100 | 64 | 1 | 260 | 359 | 237 | 333 | 1.80e-14 | 73.9 |
| MsG0480023978.01.T01 | AT5G52140 | 37.500 | 104 | 58 | 2 | 262 | 358 | 175 | 278 | 3.43e-14 | 72.4 |
| MsG0480023978.01.T01 | AT5G67120 | 36.082 | 97 | 56 | 2 | 264 | 359 | 181 | 272 | 4.19e-14 | 72.0 |
| MsG0480023978.01.T01 | AT5G10650 | 35.955 | 89 | 53 | 1 | 234 | 318 | 391 | 479 | 3.40e-13 | 70.9 |
Find 71 sgRNAs with CRISPR-Local
Find 144 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGTTGTTGATTTGGTTTC+TGG | 0.069335 | 4:-91928062 | None:intergenic |
| TCCGGAAAAGAGAAGGTTTC+TGG | 0.229241 | 4:-91928856 | None:intergenic |
| AGACATTCTCATCCTAAAAT+AGG | 0.240044 | 4:+91930693 | MsG0480023978.01.T01:three_prime_UTR |
| ATCTGTTTCTGTTTCTGAAA+TGG | 0.265844 | 4:-91928095 | None:intergenic |
| CACGTGATCTTTACAGAGAT+TGG | 0.310639 | 4:+91929653 | MsG0480023978.01.T01:CDS |
| GCAGCTACCTTCAGAGGTTT+AGG | 0.311213 | 4:+91928244 | MsG0480023978.01.T01:CDS |
| TGAGGTTGTTGTTGTTTCAT+TGG | 0.320662 | 4:-91928182 | None:intergenic |
| TCTGTTTCTGTTTCTGAAAT+GGG | 0.331183 | 4:-91928094 | None:intergenic |
| TGGATAAGGTTTCTTATCAA+TGG | 0.352904 | 4:+91930819 | MsG0480023978.01.T01:three_prime_UTR |
| CACTGCTGGTGCTTCTCAAC+AGG | 0.353298 | 4:+91928270 | MsG0480023978.01.T01:CDS |
| CAACAAGGAGGCTAAAAGTT+TGG | 0.362182 | 4:-91930774 | None:intergenic |
| CAGAGATGAAATTGTGGACT+TGG | 0.368102 | 4:-91928152 | None:intergenic |
| GTAATATATGCTATTGGATA+AGG | 0.369532 | 4:+91930805 | MsG0480023978.01.T01:three_prime_UTR |
| GTTTGGTGTGGTCCTGGAAT+TGG | 0.370161 | 4:+91928433 | MsG0480023978.01.T01:CDS |
| CTGTTTCTGAAATGGGTTTG+TGG | 0.379427 | 4:-91928087 | None:intergenic |
| AGCTTAGTCTTCCTTATGTA+AGG | 0.382634 | 4:-91929907 | None:intergenic |
| CACAGAAGACATGTTTGGTT+TGG | 0.388980 | 4:-91927990 | None:intergenic |
| CAGAGCAACAACATATGAAA+TGG | 0.397557 | 4:+91928029 | MsG0480023978.01.T01:CDS |
| CAAGATGTTTGGTGTGGTCC+TGG | 0.397639 | 4:+91928427 | MsG0480023978.01.T01:CDS |
| CATGTTTGGTTTGGTTTGGT+TGG | 0.415476 | 4:-91927981 | None:intergenic |
| CTTTCAATGTATACAACAAT+GGG | 0.432717 | 4:+91930591 | MsG0480023978.01.T01:CDS |
| GGTAGACAGCAGTGCGCCTT+CGG | 0.433538 | 4:-91928834 | None:intergenic |
| TCTGCTGAAAATCCAATTCC+AGG | 0.438438 | 4:-91928445 | None:intergenic |
| GCTTCAAGGAAGAATACTAA+TGG | 0.441507 | 4:+91929615 | MsG0480023978.01.T01:CDS |
| AGAATCGGTTATGTGAATAC+TGG | 0.446499 | 4:+91929862 | MsG0480023978.01.T01:CDS |
| TGGAGAAGAATCAACAAGAA+TGG | 0.451686 | 4:-91927961 | None:intergenic |
| TGTGTCACAGAAGACATGTT+TGG | 0.452221 | 4:-91927995 | None:intergenic |
| AAGACATGTTTGGTTTGGTT+TGG | 0.464614 | 4:-91927985 | None:intergenic |
| TTCTCAACAGGTGTCGGTGC+CGG | 0.464786 | 4:+91928282 | MsG0480023978.01.T01:CDS |
| GGAGAAGAATCAACAAGAAT+GGG | 0.470963 | 4:-91927960 | None:intergenic |
| CCGGAAAAGAGAAGGTTTCT+GGG | 0.472828 | 4:-91928855 | None:intergenic |
| GAGTCTGTAATATATGCTAT+TGG | 0.473951 | 4:+91930799 | MsG0480023978.01.T01:three_prime_UTR |
| CTGCCCTGTGTGTAAGCAGC+AGG | 0.483447 | 4:+91930630 | MsG0480023978.01.T01:CDS |
| CTTGAGCTCGGTGAGAGAAT+CGG | 0.487392 | 4:+91929847 | MsG0480023978.01.T01:CDS |
| TGATTCGTGCTTCAGCAGAT+TGG | 0.488872 | 4:+91928308 | MsG0480023978.01.T01:CDS |
| AGCCTTCATCTTCCTTCCGA+AGG | 0.489286 | 4:+91928818 | MsG0480023978.01.T01:intron |
| AGAGGTTTAGGATGCACTGC+TGG | 0.490523 | 4:+91928256 | MsG0480023978.01.T01:CDS |
| TTGAAGATAATGGCGCTTCA+AGG | 0.491059 | 4:+91929601 | MsG0480023978.01.T01:intron |
| TGGACTTGGAGCGTGTGGAT+TGG | 0.504134 | 4:-91928138 | None:intergenic |
| AAAATGTTGGGATCGGTGTC+CGG | 0.509723 | 4:-91928874 | None:intergenic |
| TTGTTGATTTGGTTTCTGGA+TGG | 0.520614 | 4:-91928058 | None:intergenic |
| CTTCAAGGAAGAATACTAAT+GGG | 0.521708 | 4:+91929616 | MsG0480023978.01.T01:CDS |
| ATGAGATGGAACCTTACATA+AGG | 0.523941 | 4:+91929896 | MsG0480023978.01.T01:CDS |
| ACTTTCAATGTATACAACAA+TGG | 0.529407 | 4:+91930590 | MsG0480023978.01.T01:CDS |
| GAGCATGCTGTGAAAATGTT+GGG | 0.537021 | 4:-91928886 | None:intergenic |
| TCTGCAGCAGCTACCTTCAG+AGG | 0.546370 | 4:+91928238 | MsG0480023978.01.T01:CDS |
| GACAGCAGTGCGCCTTCGGA+AGG | 0.548094 | 4:-91928830 | None:intergenic |
| TGGACTTAAAGAAGATGAGA+TGG | 0.549079 | 4:+91929882 | MsG0480023978.01.T01:CDS |
| TGGTGCTTCTCAACAGGTGT+CGG | 0.554363 | 4:+91928276 | MsG0480023978.01.T01:CDS |
| TCAGCAGATTGGCCTCATCA+AGG | 0.557093 | 4:+91928319 | MsG0480023978.01.T01:CDS |
| AGAGCATGCTGTGAAAATGT+TGG | 0.565371 | 4:-91928887 | None:intergenic |
| CAGCAGATTGGCCTCATCAA+GGG | 0.570341 | 4:+91928320 | MsG0480023978.01.T01:CDS |
| GCAACCTGCTGCTTACACAC+AGG | 0.572960 | 4:-91930634 | None:intergenic |
| CGCCTTCGGAAGGAAGATGA+AGG | 0.573947 | 4:-91928820 | None:intergenic |
| CAACCTGCTGCTTACACACA+GGG | 0.578724 | 4:-91930633 | None:intergenic |
| ATCGGTGTCCGGAAAAGAGA+AGG | 0.579710 | 4:-91928863 | None:intergenic |
| TGACAGCAATTGCTTGAGCT+CGG | 0.580670 | 4:+91929835 | MsG0480023978.01.T01:intron |
| TTTGTTAATGGGTTGTTGTG+AGG | 0.581700 | 4:-91928200 | None:intergenic |
| AAGCAGATGATGAGCTTGCG+AGG | 0.583826 | 4:+91930545 | MsG0480023978.01.T01:CDS |
| AGTGCATCCTAAACCTCTGA+AGG | 0.584439 | 4:-91928251 | None:intergenic |
| GAGAAGCAGAGATGAAATTG+TGG | 0.590057 | 4:-91928158 | None:intergenic |
| TGTTGATAACATGTCATATG+AGG | 0.603689 | 4:+91929684 | MsG0480023978.01.T01:CDS |
| TGCTGTGAAAATGTTGGGAT+CGG | 0.608642 | 4:-91928881 | None:intergenic |
| AATTGTGGACTTGGAGCGTG+TGG | 0.637667 | 4:-91928143 | None:intergenic |
| GCTGAAGCACGAATCACTGC+CGG | 0.639164 | 4:-91928301 | None:intergenic |
| CAAGGAAGAATACTAATGGG+AGG | 0.689238 | 4:+91929619 | MsG0480023978.01.T01:CDS |
| GAAATATCTCTGATATGACG+AGG | 0.695301 | 4:-91928928 | None:intergenic |
| ATATTACAGACTCCTCAACA+AGG | 0.696962 | 4:-91930789 | None:intergenic |
| AAATATCTCTGATATGACGA+GGG | 0.711372 | 4:-91928927 | None:intergenic |
| CGACAAGATAACTCACAGAG+AGG | 0.725536 | 4:+91928537 | MsG0480023978.01.T01:CDS |
| TTACAGACTCCTCAACAAGG+AGG | 0.770291 | 4:-91930786 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATAGAAATGATTAT+TGG | - | Chr4:91929722-91929741 | None:intergenic | 10.0% |
| !! | ATGTATATCATAAATTTAAT+TGG | - | Chr4:91930496-91930515 | None:intergenic | 10.0% |
| !! | AAAAAATAACCTAAATACAT+AGG | + | Chr4:91930367-91930386 | MsG0480023978.01.T01:intron | 15.0% |
| !! | CAAAATCATGAATTTAAAAA+TGG | + | Chr4:91930429-91930448 | MsG0480023978.01.T01:intron | 15.0% |
| !!! | AAAAATTATACACCTATTTT+AGG | - | Chr4:91930708-91930727 | None:intergenic | 15.0% |
| !!! | CATTTTTAAATTCATGATTT+TGG | - | Chr4:91930431-91930450 | None:intergenic | 15.0% |
| !!! | TATTCAGAATTTTCATTTTT+TGG | + | Chr4:91930730-91930749 | MsG0480023978.01.T01:three_prime_UTR | 15.0% |
| !!! | TCATAATATAATTTTGTCAA+TGG | + | Chr4:91930343-91930362 | MsG0480023978.01.T01:intron | 15.0% |
| !! | AAAAAGAAAGTAAATTACCA+TGG | - | Chr4:91929074-91929093 | None:intergenic | 20.0% |
| !! | AAACTTGATCATAACTATAT+TGG | + | Chr4:91928794-91928813 | MsG0480023978.01.T01:intron | 20.0% |
| !! | AATCATGAATTTAAAAATGG+AGG | + | Chr4:91930432-91930451 | MsG0480023978.01.T01:intron | 20.0% |
| !! | ATCATGAATTTAAAAATGGA+GGG | + | Chr4:91930433-91930452 | MsG0480023978.01.T01:intron | 20.0% |
| !!! | AAAGTTGATCTTTTTGTTAA+TGG | - | Chr4:91928215-91928234 | None:intergenic | 20.0% |
| !!! | AAGTTGATCTTTTTGTTAAT+GGG | - | Chr4:91928214-91928233 | None:intergenic | 20.0% |
| !!! | ACTAAATTCTAAAATTGGAT+TGG | + | Chr4:91929260-91929279 | MsG0480023978.01.T01:intron | 20.0% |
| !!! | ATAAAAATGATCAAAGTACT+TGG | - | Chr4:91929151-91929170 | None:intergenic | 20.0% |
| ! | AAAATCGTAGATTGAGAAAT+AGG | - | Chr4:91930060-91930079 | None:intergenic | 25.0% |
| ! | AAATAACCTAAATACATAGG+TGG | + | Chr4:91930370-91930389 | MsG0480023978.01.T01:intron | 25.0% |
| ! | AAATCGTAGATTGAGAAATA+GGG | - | Chr4:91930059-91930078 | None:intergenic | 25.0% |
| ! | AATTAATGCCTACTTAAAGT+AGG | + | Chr4:91929352-91929371 | MsG0480023978.01.T01:intron | 25.0% |
| ! | ACTTTCAATGTATACAACAA+TGG | + | Chr4:91930590-91930609 | MsG0480023978.01.T01:CDS | 25.0% |
| ! | ATGTTGTAAATTTCTTTGCA+TGG | + | Chr4:91929471-91929490 | MsG0480023978.01.T01:intron | 25.0% |
| ! | CATAAAAACTAAGCAAAATC+TGG | + | Chr4:91929033-91929052 | MsG0480023978.01.T01:intron | 25.0% |
| ! | CTTTCAATGTATACAACAAT+GGG | + | Chr4:91930591-91930610 | MsG0480023978.01.T01:CDS | 25.0% |
| ! | GTAATATATGCTATTGGATA+AGG | + | Chr4:91930805-91930824 | MsG0480023978.01.T01:three_prime_UTR | 25.0% |
| ! | TCTTGTGTATTCTTTCATTA+AGG | + | Chr4:91928982-91929001 | MsG0480023978.01.T01:intron | 25.0% |
| ! | TGTATAGCATTTGAATGTAT+TGG | + | Chr4:91929235-91929254 | MsG0480023978.01.T01:intron | 25.0% |
| ! | TTCTTCTATGTACATTAGTT+AGG | + | Chr4:91928603-91928622 | MsG0480023978.01.T01:intron | 25.0% |
| ! | TTGCATATTCTCATTATTGT+TGG | + | Chr4:91929574-91929593 | MsG0480023978.01.T01:intron | 25.0% |
| !! | CATGTTTAATTTATGAGTAC+AGG | + | Chr4:91930513-91930532 | MsG0480023978.01.T01:intron | 25.0% |
| !! | GAACATCACAATTTTCAAAA+TGG | - | Chr4:91928586-91928605 | None:intergenic | 25.0% |
| !! | GATTTGGTATATTCTATTCA+AGG | - | Chr4:91929290-91929309 | None:intergenic | 25.0% |
| !! | TTGATTGCGATTTTTATGTT+AGG | + | Chr4:91929417-91929436 | MsG0480023978.01.T01:intron | 25.0% |
| !!! | ACATGATTTTTTCAAGAAGT+AGG | + | Chr4:91929442-91929461 | MsG0480023978.01.T01:intron | 25.0% |
| !!! | ATCAGACATTTTGAAAATTG+TGG | + | Chr4:91930403-91930422 | MsG0480023978.01.T01:intron | 25.0% |
| !!! | TCAGACATTTTGAAAATTGT+GGG | + | Chr4:91930404-91930423 | MsG0480023978.01.T01:intron | 25.0% |
| !!! | TGGCTACTAAATTCTAAAAT+TGG | + | Chr4:91929255-91929274 | MsG0480023978.01.T01:intron | 25.0% |
| !!! | TGTTGGAATTTTGAAGATAA+TGG | + | Chr4:91929591-91929610 | MsG0480023978.01.T01:intron | 25.0% |
| AAATATCTCTGATATGACGA+GGG | - | Chr4:91928930-91928949 | None:intergenic | 30.0% | |
| AATCGTAGATTGAGAAATAG+GGG | - | Chr4:91930058-91930077 | None:intergenic | 30.0% | |
| ACTGTTATCAGAAACCAAAA+TGG | - | Chr4:91928746-91928765 | None:intergenic | 30.0% | |
| AGACATTCTCATCCTAAAAT+AGG | + | Chr4:91930693-91930712 | MsG0480023978.01.T01:three_prime_UTR | 30.0% | |
| CTTCAAGGAAGAATACTAAT+GGG | + | Chr4:91929616-91929635 | MsG0480023978.01.T01:CDS | 30.0% | |
| GAGTCTGTAATATATGCTAT+TGG | + | Chr4:91930799-91930818 | MsG0480023978.01.T01:three_prime_UTR | 30.0% | |
| GCGATGTTAAAAACATGATT+TGG | - | Chr4:91929306-91929325 | None:intergenic | 30.0% | |
| TAACTTAGCAAAGACTTGAT+TGG | - | Chr4:91929533-91929552 | None:intergenic | 30.0% | |
| TGGATAAGGTTTCTTATCAA+TGG | + | Chr4:91930819-91930838 | MsG0480023978.01.T01:three_prime_UTR | 30.0% | |
| TGTTGAGTAAGTCAATATGA+TGG | + | Chr4:91929501-91929520 | MsG0480023978.01.T01:intron | 30.0% | |
| ! | ACAGACATCTATGATTAGTT+TGG | + | Chr4:91928675-91928694 | MsG0480023978.01.T01:intron | 30.0% |
| ! | AGTTTTACAAACTAACTACC+TGG | - | Chr4:91929987-91930006 | None:intergenic | 30.0% |
| ! | GTCGGTCAATTTTAAATTTG+AGG | - | Chr4:91930087-91930106 | None:intergenic | 30.0% |
| ! | GTTAAACTTCATCACCATTT+TGG | + | Chr4:91928729-91928748 | MsG0480023978.01.T01:intron | 30.0% |
| ! | GTTTAATTTATGAGTACAGG+AGG | + | Chr4:91930516-91930535 | MsG0480023978.01.T01:intron | 30.0% |
| ! | TGGTGATGAAGTTTAACATA+AGG | - | Chr4:91928726-91928745 | None:intergenic | 30.0% |
| !! | ATCTGTTTCTGTTTCTGAAA+TGG | - | Chr4:91928098-91928117 | None:intergenic | 30.0% |
| !! | TCTGTTTCTGTTTCTGAAAT+GGG | - | Chr4:91928097-91928116 | None:intergenic | 30.0% |
| !! | TGTTGATAACATGTCATATG+AGG | + | Chr4:91929684-91929703 | MsG0480023978.01.T01:CDS | 30.0% |
| !! | TTTGTTGTTGATTTGGTTTC+TGG | - | Chr4:91928065-91928084 | None:intergenic | 30.0% |
| !!! | ATTCTTGTGCTTCTTTTTTC+TGG | - | Chr4:91928353-91928372 | None:intergenic | 30.0% |
| !!! | GTGTTGATTTTCAAGATGTT+TGG | + | Chr4:91928416-91928435 | MsG0480023978.01.T01:CDS | 30.0% |
| !!! | TGGATTTGTTTTGTGTTAAG+AGG | - | Chr4:91928121-91928140 | None:intergenic | 30.0% |
| !!! | TGTGGTTTTTGTTGTTGATT+TGG | - | Chr4:91928072-91928091 | None:intergenic | 30.0% |
| AACACCTTCCTACTTTAAGT+AGG | - | Chr4:91929363-91929382 | None:intergenic | 35.0% | |
| AATGCATAGGTAGAAGGAAA+AGG | - | Chr4:91930109-91930128 | None:intergenic | 35.0% | |
| AATGCCTACTTAAAGTAGGA+AGG | + | Chr4:91929356-91929375 | MsG0480023978.01.T01:intron | 35.0% | |
| AGAATCGGTTATGTGAATAC+TGG | + | Chr4:91929862-91929881 | MsG0480023978.01.T01:CDS | 35.0% | |
| ATATTACAGACTCCTCAACA+AGG | - | Chr4:91930792-91930811 | None:intergenic | 35.0% | |
| ATCGTAGATTGAGAAATAGG+GGG | - | Chr4:91930057-91930076 | None:intergenic | 35.0% | |
| ATGAGATGGAACCTTACATA+AGG | + | Chr4:91929896-91929915 | MsG0480023978.01.T01:CDS | 35.0% | |
| CAGAGCAACAACATATGAAA+TGG | + | Chr4:91928029-91928048 | MsG0480023978.01.T01:CDS | 35.0% | |
| GAAATATCTCTGATATGACG+AGG | - | Chr4:91928931-91928950 | None:intergenic | 35.0% | |
| GCTTCAAGGAAGAATACTAA+TGG | + | Chr4:91929615-91929634 | MsG0480023978.01.T01:CDS | 35.0% | |
| TGGACTTAAAGAAGATGAGA+TGG | + | Chr4:91929882-91929901 | MsG0480023978.01.T01:CDS | 35.0% | |
| TGTTGAAGATGTAGTAAGTG+AGG | + | Chr4:91930140-91930159 | MsG0480023978.01.T01:intron | 35.0% | |
| ! | AGCTTAGTCTTCCTTATGTA+AGG | - | Chr4:91929910-91929929 | None:intergenic | 35.0% |
| ! | ATTTTCACAGCATGCTCTTT+TGG | + | Chr4:91928892-91928911 | MsG0480023978.01.T01:CDS | 35.0% |
| ! | TTCGTCTGATGATTTTTCTG+AGG | + | Chr4:91928948-91928967 | MsG0480023978.01.T01:CDS | 35.0% |
| !! | AAGACATGTTTGGTTTGGTT+TGG | - | Chr4:91927988-91928007 | None:intergenic | 35.0% |
| !! | CTTAAAGTAGGAAGGTGTTA+TGG | + | Chr4:91929364-91929383 | MsG0480023978.01.T01:intron | 35.0% |
| !! | GATTTTCAAGATGTTTGGTG+TGG | + | Chr4:91928421-91928440 | MsG0480023978.01.T01:CDS | 35.0% |
| !! | TGAGGTTGTTGTTGTTTCAT+TGG | - | Chr4:91928185-91928204 | None:intergenic | 35.0% |
| !! | TTGTTGATTTGGTTTCTGGA+TGG | - | Chr4:91928061-91928080 | None:intergenic | 35.0% |
| !! | TTTGTTAATGGGTTGTTGTG+AGG | - | Chr4:91928203-91928222 | None:intergenic | 35.0% |
| !!! | GATTCTCACTTTTTTGAGCA+AGG | + | Chr4:91930196-91930215 | MsG0480023978.01.T01:intron | 35.0% |
| ACAAAGATGCATGCAAGTAC+TGG | - | Chr4:91929784-91929803 | None:intergenic | 40.0% | |
| AGAGCATGCTGTGAAAATGT+TGG | - | Chr4:91928890-91928909 | None:intergenic | 40.0% | |
| CAACAAGGAGGCTAAAAGTT+TGG | - | Chr4:91930777-91930796 | None:intergenic | 40.0% | |
| CAAGGAAGAATACTAATGGG+AGG | + | Chr4:91929619-91929638 | MsG0480023978.01.T01:CDS | 40.0% | |
| CACAGAAGACATGTTTGGTT+TGG | - | Chr4:91927993-91928012 | None:intergenic | 40.0% | |
| CACGTGATCTTTACAGAGAT+TGG | + | Chr4:91929653-91929672 | MsG0480023978.01.T01:CDS | 40.0% | |
| CAGAGATGAAATTGTGGACT+TGG | - | Chr4:91928155-91928174 | None:intergenic | 40.0% | |
| CATAGGTAGAAGGAAAAGGT+CGG | - | Chr4:91930105-91930124 | None:intergenic | 40.0% | |
| CATTCAGCCTCAAAATGCAT+AGG | - | Chr4:91930122-91930141 | None:intergenic | 40.0% | |
| CCTCAAAATGCATAGGTAGA+AGG | - | Chr4:91930115-91930134 | None:intergenic | 40.0% | |
| CTTCTGCCACCTATGTATTT+AGG | - | Chr4:91930379-91930398 | None:intergenic | 40.0% | |
| GACAACATATCAACAGCTTG+AGG | - | Chr4:91929762-91929781 | None:intergenic | 40.0% | |
| GAGAAGCAGAGATGAAATTG+TGG | - | Chr4:91928161-91928180 | None:intergenic | 40.0% | |
| GAGCATGCTGTGAAAATGTT+GGG | - | Chr4:91928889-91928908 | None:intergenic | 40.0% | |
| GGTCTGTCTATATCAAACCA+TGG | + | Chr4:91929054-91929073 | MsG0480023978.01.T01:intron | 40.0% | |
| TCTGCTGAAAATCCAATTCC+AGG | - | Chr4:91928448-91928467 | None:intergenic | 40.0% | |
| TGCTGTGAAAATGTTGGGAT+CGG | - | Chr4:91928884-91928903 | None:intergenic | 40.0% | |
| TGTGTCACAGAAGACATGTT+TGG | - | Chr4:91927998-91928017 | None:intergenic | 40.0% | |
| TTGGTTATATGACACAGGCT+AGG | + | Chr4:91930171-91930190 | MsG0480023978.01.T01:intron | 40.0% | |
| ! | AACTTTTAGCCTCCTTGTTG+AGG | + | Chr4:91930777-91930796 | MsG0480023978.01.T01:three_prime_UTR | 40.0% |
| ! | CCTTCTACCTATGCATTTTG+AGG | + | Chr4:91930112-91930131 | MsG0480023978.01.T01:intron | 40.0% |
| ! | CTTCGTTGGTTATATGACAC+AGG | + | Chr4:91930166-91930185 | MsG0480023978.01.T01:intron | 40.0% |
| ! | TTGAAGATAATGGCGCTTCA+AGG | + | Chr4:91929601-91929620 | MsG0480023978.01.T01:intron | 40.0% |
| !! | CATGTTTGGTTTGGTTTGGT+TGG | - | Chr4:91927984-91928003 | None:intergenic | 40.0% |
| !! | CTGTTTCTGAAATGGGTTTG+TGG | - | Chr4:91928090-91928109 | None:intergenic | 40.0% |
| AGTAAGTGAGGCAACTTCGT+TGG | + | Chr4:91930152-91930171 | MsG0480023978.01.T01:intron | 45.0% | |
| AGTGCATCCTAAACCTCTGA+AGG | - | Chr4:91928254-91928273 | None:intergenic | 45.0% | |
| CCGGAAAAGAGAAGGTTTCT+GGG | - | Chr4:91928858-91928877 | None:intergenic | 45.0% | |
| CGACAAGATAACTCACAGAG+AGG | + | Chr4:91928537-91928556 | MsG0480023978.01.T01:CDS | 45.0% | |
| TCCGGAAAAGAGAAGGTTTC+TGG | - | Chr4:91928859-91928878 | None:intergenic | 45.0% | |
| TGACAGCAATTGCTTGAGCT+CGG | + | Chr4:91929835-91929854 | MsG0480023978.01.T01:intron | 45.0% | |
| TGATTCGTGCTTCAGCAGAT+TGG | + | Chr4:91928308-91928327 | MsG0480023978.01.T01:CDS | 45.0% | |
| TTACAGACTCCTCAACAAGG+AGG | - | Chr4:91930789-91930808 | None:intergenic | 45.0% | |
| ! | AAAATGTTGGGATCGGTGTC+CGG | - | Chr4:91928877-91928896 | None:intergenic | 45.0% |
| ! | CAAAAAGTGCAGCATTTGCC+AGG | + | Chr4:91929966-91929985 | MsG0480023978.01.T01:CDS | 45.0% |
| ! | CCCAGAAACCTTCTCTTTTC+CGG | + | Chr4:91928855-91928874 | MsG0480023978.01.T01:CDS | 45.0% |
| !! | CTGGTTTTCTTCCCTTGATG+AGG | - | Chr4:91928334-91928353 | None:intergenic | 45.0% |
| AAGCAGATGATGAGCTTGCG+AGG | + | Chr4:91930545-91930564 | MsG0480023978.01.T01:CDS | 50.0% | |
| AATTGTGGACTTGGAGCGTG+TGG | - | Chr4:91928146-91928165 | None:intergenic | 50.0% | |
| AGCCTTCATCTTCCTTCCGA+AGG | + | Chr4:91928818-91928837 | MsG0480023978.01.T01:intron | 50.0% | |
| GCAGCTACCTTCAGAGGTTT+AGG | + | Chr4:91928244-91928263 | MsG0480023978.01.T01:CDS | 50.0% | |
| TGGTGCTTCTCAACAGGTGT+CGG | + | Chr4:91928276-91928295 | MsG0480023978.01.T01:CDS | 50.0% | |
| ! | AGAGGTTTAGGATGCACTGC+TGG | + | Chr4:91928256-91928275 | MsG0480023978.01.T01:CDS | 50.0% |
| ! | ATCGGTGTCCGGAAAAGAGA+AGG | - | Chr4:91928866-91928885 | None:intergenic | 50.0% |
| ! | CAACCTGCTGCTTACACACA+GGG | - | Chr4:91930636-91930655 | None:intergenic | 50.0% |
| ! | CTTGAGCTCGGTGAGAGAAT+CGG | + | Chr4:91929847-91929866 | MsG0480023978.01.T01:CDS | 50.0% |
| !! | CAAGATGTTTGGTGTGGTCC+TGG | + | Chr4:91928427-91928446 | MsG0480023978.01.T01:CDS | 50.0% |
| !! | CAGCAGATTGGCCTCATCAA+GGG | + | Chr4:91928320-91928339 | MsG0480023978.01.T01:CDS | 50.0% |
| !! | GTTTGGTGTGGTCCTGGAAT+TGG | + | Chr4:91928433-91928452 | MsG0480023978.01.T01:CDS | 50.0% |
| !! | TCAGCAGATTGGCCTCATCA+AGG | + | Chr4:91928319-91928338 | MsG0480023978.01.T01:CDS | 50.0% |
| CACTGCTGGTGCTTCTCAAC+AGG | + | Chr4:91928270-91928289 | MsG0480023978.01.T01:CDS | 55.0% | |
| CGCCTTCGGAAGGAAGATGA+AGG | - | Chr4:91928823-91928842 | None:intergenic | 55.0% | |
| GCTGAAGCACGAATCACTGC+CGG | - | Chr4:91928304-91928323 | None:intergenic | 55.0% | |
| TCTGCAGCAGCTACCTTCAG+AGG | + | Chr4:91928238-91928257 | MsG0480023978.01.T01:CDS | 55.0% | |
| TGGACTTGGAGCGTGTGGAT+TGG | - | Chr4:91928141-91928160 | None:intergenic | 55.0% | |
| ! | GCAACCTGCTGCTTACACAC+AGG | - | Chr4:91930637-91930656 | None:intergenic | 55.0% |
| !! | TTCTCAACAGGTGTCGGTGC+CGG | + | Chr4:91928282-91928301 | MsG0480023978.01.T01:CDS | 55.0% |
| CTGCCCTGTGTGTAAGCAGC+AGG | + | Chr4:91930630-91930649 | MsG0480023978.01.T01:CDS | 60.0% | |
| GGTAGACAGCAGTGCGCCTT+CGG | - | Chr4:91928837-91928856 | None:intergenic | 60.0% | |
| GACAGCAGTGCGCCTTCGGA+AGG | - | Chr4:91928833-91928852 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 91927963 | 91930855 | 91927963 | ID=MsG0480023978.01;Name=MsG0480023978.01 |
| Chr4 | mRNA | 91927963 | 91930855 | 91927963 | ID=MsG0480023978.01.T01;Parent=MsG0480023978.01;Name=MsG0480023978.01.T01;_AED=0.49;_eAED=0.49;_QI=38|0.75|0.8|1|1|1|5|186|362 |
| Chr4 | exon | 91927963 | 91928558 | 91927963 | ID=MsG0480023978.01.T01:exon:12740;Parent=MsG0480023978.01.T01 |
| Chr4 | exon | 91928820 | 91928969 | 91928820 | ID=MsG0480023978.01.T01:exon:12741;Parent=MsG0480023978.01.T01 |
| Chr4 | exon | 91929607 | 91929705 | 91929607 | ID=MsG0480023978.01.T01:exon:12742;Parent=MsG0480023978.01.T01 |
| Chr4 | exon | 91929841 | 91929987 | 91929841 | ID=MsG0480023978.01.T01:exon:12743;Parent=MsG0480023978.01.T01 |
| Chr4 | exon | 91930535 | 91930855 | 91930535 | ID=MsG0480023978.01.T01:exon:12744;Parent=MsG0480023978.01.T01 |
| Chr4 | five_prime_UTR | 91927963 | 91928000 | 91927963 | ID=MsG0480023978.01.T01:five_prime_utr;Parent=MsG0480023978.01.T01 |
| Chr4 | CDS | 91928001 | 91928558 | 91928001 | ID=MsG0480023978.01.T01:cds;Parent=MsG0480023978.01.T01 |
| Chr4 | CDS | 91928820 | 91928969 | 91928820 | ID=MsG0480023978.01.T01:cds;Parent=MsG0480023978.01.T01 |
| Chr4 | CDS | 91929607 | 91929705 | 91929607 | ID=MsG0480023978.01.T01:cds;Parent=MsG0480023978.01.T01 |
| Chr4 | CDS | 91929841 | 91929987 | 91929841 | ID=MsG0480023978.01.T01:cds;Parent=MsG0480023978.01.T01 |
| Chr4 | CDS | 91930535 | 91930669 | 91930535 | ID=MsG0480023978.01.T01:cds;Parent=MsG0480023978.01.T01 |
| Chr4 | three_prime_UTR | 91930670 | 91930855 | 91930670 | ID=MsG0480023978.01.T01:three_prime_utr;Parent=MsG0480023978.01.T01 |
| Gene Sequence |
| Protein sequence |
