AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006481.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006481.01.T01 MTR_2g009340 97.234 687 7 3 1 677 1 685 0.0 1377
MsG0280006481.01.T01 MTR_4g093850 78.894 687 117 9 1 677 1 669 0.0 1086
MsG0280006481.01.T01 MTR_4g093850 76.228 509 103 7 1 500 1 500 0.0 774
MsG0280006481.01.T01 MTR_8g090220 40.666 691 294 15 3 656 13 624 1.23e-169 500
MsG0280006481.01.T01 MTR_8g090220 43.563 567 234 11 3 546 13 516 4.50e-157 463
MsG0280006481.01.T01 MTR_2g018750 37.120 625 322 12 19 628 1 569 7.42e-128 391
MsG0280006481.01.T01 MTR_2g084595 35.955 623 333 12 27 628 6 583 9.23e-124 382
MsG0280006481.01.T01 MTR_5g032780 40.541 555 262 11 23 545 5 523 1.72e-122 379
MsG0280006481.01.T01 MTR_5g015790 40.335 538 243 12 23 541 5 483 1.92e-121 375
MsG0280006481.01.T01 MTR_1g094850 35.873 630 327 12 23 634 5 575 1.44e-118 367
MsG0280006481.01.T01 MTR_8g078900 35.069 653 327 13 34 632 10 619 2.12e-117 366
MsG0280006481.01.T01 MTR_5g016060 35.811 592 294 8 32 605 28 551 2.37e-117 365
MsG0280006481.01.T01 MTR_4g022330 35.161 620 328 10 33 638 24 583 1.05e-115 360
MsG0280006481.01.T01 MTR_1g014070 37.918 538 262 11 19 540 6 487 7.82e-114 355
MsG0280006481.01.T01 MTR_1g106430 37.660 547 272 12 23 551 5 500 1.79e-113 355
MsG0280006481.01.T01 MTR_8g069330 39.531 554 234 11 23 545 5 488 1.05e-112 352
MsG0280006481.01.T01 MTR_8g078900 36.833 581 299 11 77 632 42 579 5.38e-111 348
MsG0280006481.01.T01 MTR_8g078900 36.833 581 299 11 77 632 52 589 6.71e-111 348
MsG0280006481.01.T01 MTR_1g082690 33.389 599 281 14 33 615 47 543 1.34e-110 345
MsG0280006481.01.T01 MTR_1g064360 36.178 539 274 9 23 548 5 486 2.83e-110 344
MsG0280006481.01.T01 MTR_4g095430 35.108 601 297 9 32 613 1 527 1.31e-106 336
MsG0280006481.01.T01 MTR_4g134210 37.148 533 267 9 23 545 5 479 1.10e-105 334
MsG0280006481.01.T01 MTR_2g048390 38.923 483 245 9 23 490 5 452 5.11e-103 322
MsG0280006481.01.T01 MTR_1g088885 31.734 646 351 13 20 640 13 593 3.99e-101 322
MsG0280006481.01.T01 MTR_7g073980 34.465 589 305 16 36 607 25 549 6.24e-100 320
MsG0280006481.01.T01 MTR_7g108290 31.406 640 357 13 20 635 13 594 3.08e-97 313
MsG0280006481.01.T01 MTR_5g075640 33.652 523 277 8 32 545 13 474 3.14e-96 308
MsG0280006481.01.T01 MTR_3g062540 32.258 620 318 10 32 639 12 541 8.42e-96 307
MsG0280006481.01.T01 MTR_2g027410 34.502 542 273 9 23 552 5 476 9.15e-94 301
MsG0280006481.01.T01 MTR_2g084595 36.232 483 246 9 27 490 6 445 1.08e-91 292
MsG0280006481.01.T01 MTR_5g016060 34.722 504 252 7 111 605 2 437 4.16e-89 288
MsG0280006481.01.T01 MTR_2g027410 37.131 474 225 8 82 552 1 404 1.73e-87 283
MsG0280006481.01.T01 MTR_5g075640 33.678 484 260 7 62 545 9 431 1.74e-87 284
MsG0280006481.01.T01 MTR_3g062540 32.186 581 301 9 62 639 9 499 4.52e-87 283
MsG0280006481.01.T01 MTR_8g078900 35.497 493 243 9 34 490 10 463 4.52e-85 275
MsG0280006481.01.T01 MTR_4g011530 37.065 402 194 7 224 622 46 391 1.24e-79 261
MsG0280006481.01.T01 MTR_8g078900 38.005 421 215 7 77 490 42 423 8.80e-79 258
MsG0280006481.01.T01 MTR_2g102730 34.874 476 240 7 210 677 10 423 1.77e-78 257
MsG0280006481.01.T01 MTR_4g074190 28.470 562 307 14 77 621 3 486 3.72e-53 191
MsG0280006481.01.T01 MTR_4g074190 28.036 560 308 13 77 619 49 530 9.57e-53 191
MsG0280006481.01.T01 MTR_1g035720 28.106 491 246 13 79 539 44 457 1.41e-49 181
MsG0280006481.01.T01 MTR_4g045767 27.320 571 332 16 76 637 47 543 5.63e-48 177
MsG0280006481.01.T01 MTR_4g074190 27.816 435 233 9 77 494 49 419 1.71e-39 151
MsG0280006481.01.T01 MTR_2g010890 25.926 432 241 10 101 527 1 358 3.44e-30 124
MsG0280006481.01.T01 MTR_1g105870 35.065 231 107 5 51 270 38 236 2.15e-27 112
MsG0280006481.01.T01 MTR_2g048375 33.136 169 102 4 507 670 1 163 4.38e-22 94.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006481.01.T01 AT5G64330 66.897 725 156 16 1 647 2 720 0.0 918
MsG0280006481.01.T01 AT5G64330 66.871 652 135 15 1 577 2 647 0.0 818
MsG0280006481.01.T01 AT5G64330 68.403 576 117 12 61 577 19 588 0.0 741
MsG0280006481.01.T01 AT5G10250 38.066 641 275 12 30 636 36 588 5.97e-145 436
MsG0280006481.01.T01 AT5G10250 38.035 631 274 12 30 636 36 573 9.36e-142 427
MsG0280006481.01.T01 AT1G30440 37.246 639 344 11 23 636 5 611 4.19e-138 420
MsG0280006481.01.T01 AT5G03250 36.667 630 318 15 25 635 7 574 8.68e-123 378
MsG0280006481.01.T01 AT5G13600 36.629 617 316 15 19 622 1 555 1.31e-118 367
MsG0280006481.01.T01 AT5G67440 39.698 529 235 9 39 549 22 484 1.71e-116 361
MsG0280006481.01.T01 AT5G67440 39.698 529 235 9 39 549 22 484 1.71e-116 361
MsG0280006481.01.T01 AT1G67900 38.169 579 279 9 23 571 5 534 5.56e-114 356
MsG0280006481.01.T01 AT1G67900 38.169 579 279 9 23 571 5 534 5.56e-114 356
MsG0280006481.01.T01 AT1G67900 38.169 579 279 9 23 571 5 534 5.56e-114 356
MsG0280006481.01.T01 AT1G67900 38.169 579 279 9 23 571 5 534 5.56e-114 356
MsG0280006481.01.T01 AT1G67900 38.169 579 279 9 23 571 5 534 5.56e-114 356
MsG0280006481.01.T01 AT1G67900 38.169 579 279 9 23 571 5 534 5.56e-114 356
MsG0280006481.01.T01 AT5G67385 38.302 530 257 8 32 550 13 483 1.65e-113 354
MsG0280006481.01.T01 AT3G44820 34.804 612 344 10 27 617 6 583 8.89e-113 353
MsG0280006481.01.T01 AT5G67440 40.161 498 226 8 58 549 16 447 9.27e-110 342
MsG0280006481.01.T01 AT2G14820 37.409 548 272 12 23 551 5 500 3.54e-109 344
MsG0280006481.01.T01 AT2G14820 37.409 548 272 12 23 551 5 500 3.54e-109 344
MsG0280006481.01.T01 AT4G31820 36.891 534 252 13 23 541 5 468 2.73e-108 340
MsG0280006481.01.T01 AT5G67385 39.130 483 234 6 69 550 15 438 5.85e-106 333
MsG0280006481.01.T01 AT5G67385 39.130 483 234 6 69 550 15 438 5.85e-106 333
MsG0280006481.01.T01 AT5G67385 39.130 483 234 6 69 550 15 438 5.85e-106 333
MsG0280006481.01.T01 AT5G67385 39.130 483 234 6 69 550 15 438 5.85e-106 333
MsG0280006481.01.T01 AT2G30520 34.026 626 320 10 32 642 18 565 2.99e-104 330
MsG0280006481.01.T01 AT5G66560 32.801 689 337 16 28 639 3 642 6.05e-104 331
MsG0280006481.01.T01 AT4G37590 34.884 602 275 14 23 598 5 515 1.17e-103 328
MsG0280006481.01.T01 AT5G48800 34.314 612 324 9 37 635 34 580 5.75e-103 327
MsG0280006481.01.T01 AT1G03010 31.420 662 340 14 21 640 14 603 1.62e-102 326
MsG0280006481.01.T01 AT1G03010 31.981 641 323 13 42 640 7 576 2.51e-101 322
MsG0280006481.01.T01 AT3G08570 33.819 618 320 14 40 639 30 576 2.76e-101 323
MsG0280006481.01.T01 AT4G31820 37.320 485 229 11 62 541 1 415 6.29e-101 318
MsG0280006481.01.T01 AT1G03010 31.981 641 323 13 42 640 33 602 6.35e-101 322
MsG0280006481.01.T01 AT5G47800 36.053 527 270 8 23 539 5 474 1.20e-100 319
MsG0280006481.01.T01 AT5G47800 36.053 527 270 8 23 539 5 474 1.20e-100 319
MsG0280006481.01.T01 AT5G47800 36.053 527 270 8 23 539 5 474 1.20e-100 319
MsG0280006481.01.T01 AT5G66560 35.434 587 306 13 77 639 76 613 3.06e-100 320
MsG0280006481.01.T01 AT5G66560 35.434 587 306 13 77 639 66 603 3.28e-100 320
MsG0280006481.01.T01 AT5G47800 36.053 527 270 8 23 539 118 587 3.89e-99 318
MsG0280006481.01.T01 AT3G26490 35.072 556 275 12 25 545 7 511 5.93e-96 308
MsG0280006481.01.T01 AT3G26490 35.072 556 275 12 25 545 7 511 5.93e-96 308
MsG0280006481.01.T01 AT3G26490 35.072 556 275 12 25 545 7 511 5.93e-96 308
MsG0280006481.01.T01 AT3G08660 33.782 595 280 15 40 614 30 530 1.52e-93 301
MsG0280006481.01.T01 AT2G30520 33.731 587 305 9 62 642 9 517 1.75e-93 300
MsG0280006481.01.T01 AT2G30520 33.731 587 305 9 62 642 9 517 1.75e-93 300
MsG0280006481.01.T01 AT2G23050 35.448 536 239 11 23 541 5 450 2.07e-93 298
MsG0280006481.01.T01 AT2G47860 31.839 647 319 17 17 617 2 572 3.18e-93 302
MsG0280006481.01.T01 AT3G08660 34.735 547 257 13 77 614 15 470 8.81e-91 292
MsG0280006481.01.T01 AT2G47860 30.448 670 321 17 17 617 2 595 9.37e-90 293
MsG0280006481.01.T01 AT5G03250 34.924 524 271 13 120 635 1 462 1.86e-88 285
MsG0280006481.01.T01 AT3G50840 32.570 611 318 13 38 632 10 542 6.29e-88 286
MsG0280006481.01.T01 AT3G50840 32.988 579 303 12 61 632 6 506 1.49e-82 271
MsG0280006481.01.T01 AT3G50840 32.988 579 303 12 61 632 6 506 1.49e-82 271
MsG0280006481.01.T01 AT3G49970 32.836 536 245 9 73 607 31 452 5.95e-81 266
MsG0280006481.01.T01 AT3G49970 32.836 536 245 9 73 607 31 452 5.95e-81 266
MsG0280006481.01.T01 AT3G15570 33.404 473 247 9 224 677 29 452 3.62e-78 257
MsG0280006481.01.T01 AT1G52770 32.937 504 263 12 197 677 3 454 7.29e-75 248
MsG0280006481.01.T01 AT5G66560 33.269 520 235 13 34 490 9 479 2.23e-73 245
MsG0280006481.01.T01 AT3G26490 32.669 502 252 12 25 491 7 457 6.89e-71 239
MsG0280006481.01.T01 AT2G23050 34.043 423 189 7 120 541 1 334 4.43e-68 227
MsG0280006481.01.T01 AT2G47860 31.853 518 233 15 17 490 2 443 3.04e-67 228
MsG0280006481.01.T01 AT3G08660 33.192 473 211 12 40 492 30 417 1.30e-66 225
MsG0280006481.01.T01 AT2G47860 30.038 526 268 12 120 617 1 454 9.83e-65 223
MsG0280006481.01.T01 AT2G47860 30.038 526 268 12 120 617 1 454 9.83e-65 223
MsG0280006481.01.T01 AT2G47860 30.314 541 234 15 17 490 2 466 6.10e-64 219
MsG0280006481.01.T01 AT1G50280 29.274 468 264 9 77 535 51 460 1.84e-48 178
MsG0280006481.01.T01 AT1G50280 29.274 468 264 9 77 535 18 427 1.91e-48 177
MsG0280006481.01.T01 AT3G03510 26.250 560 276 16 89 641 8 437 1.30e-39 152
MsG0280006481.01.T01 AT3G19850 34.586 266 156 3 330 595 269 516 2.56e-38 150
MsG0280006481.01.T01 AT3G19850 32.143 168 98 2 77 231 52 216 8.68e-17 84.7
MsG0280006481.01.T01 AT5G17580 26.562 512 286 12 46 542 22 458 1.94e-37 147
MsG0280006481.01.T01 AT5G17580 26.367 512 287 11 46 542 7 443 2.02e-37 147
MsG0280006481.01.T01 AT3G22104 26.096 456 250 11 76 526 47 420 3.11e-35 140
MsG0280006481.01.T01 AT5G48130 32.766 235 142 5 37 263 32 258 1.26e-33 137
MsG0280006481.01.T01 AT5G48130 34.921 126 79 1 425 550 356 478 1.39e-18 90.5
MsG0280006481.01.T01 AT3G22104 25.176 425 232 10 106 526 3 345 2.66e-26 112
MsG0280006481.01.T01 AT3G22104 25.176 425 232 10 106 526 3 345 2.66e-26 112
MsG0280006481.01.T01 AT3G22104 25.176 425 232 10 106 526 3 345 2.66e-26 112
MsG0280006481.01.T01 AT3G49900 35.762 151 88 5 34 175 55 205 7.86e-14 75.1
MsG0280006481.01.T01 AT3G49900 35.762 151 88 5 34 175 55 205 8.36e-14 75.1

Find 113 sgRNAs with CRISPR-Local

Find 171 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAACAGCAGGGAACATTTC+TGG 0.175923 2:+2572130 MsG0280006481.01.T01:CDS
CCACTCTTGCTTTAGCATTA+AGG 0.194475 2:-2573125 None:intergenic
GAGAATGGCAATTATGTTAA+AGG 0.217758 2:+2572876 MsG0280006481.01.T01:CDS
TAGAGTCATTACTGCTATTA+AGG 0.220033 2:+2572534 MsG0280006481.01.T01:CDS
TCTTTCATTGACAAAGTTTC+AGG 0.239657 2:+2573194 MsG0280006481.01.T01:CDS
AAAATGAAAGGCTTCCATTA+AGG 0.246972 2:+2573962 MsG0280006481.01.T01:CDS
ATGCATCAATTGAGAGTTTC+TGG 0.254350 2:-2573924 None:intergenic
AGCAATTCCATAGCAGAATT+TGG 0.262431 2:-2572101 None:intergenic
TCTTTACCTGTTCTGCAAAT+AGG 0.263165 2:-2573999 None:intergenic
TAGCAGTTGTCCATCCTTCT+TGG 0.266447 2:-2574125 None:intergenic
TTAATTCCTTGTTATAATAA+AGG 0.275835 2:+2572973 MsG0280006481.01.T01:CDS
ATTACTGCTATTAAGGTAAA+AGG 0.277571 2:+2572541 MsG0280006481.01.T01:CDS
ACTTGCACAACTACCCTTAA+TGG 0.282327 2:-2573976 None:intergenic
GGAATGAGATTTGAGTTAAT+TGG 0.282402 2:+2572562 MsG0280006481.01.T01:CDS
CTAATCCAAAAGGGATAAAA+TGG 0.293832 2:+2572365 MsG0280006481.01.T01:CDS
TTTGGAGCTTCAAAATGATA+TGG 0.295839 2:+2574200 MsG0280006481.01.T01:CDS
TAATGCATTATGCAACTAAA+TGG 0.300901 2:+2572593 MsG0280006481.01.T01:CDS
TTTCATGCACTTTCCTTCTT+AGG 0.307187 2:+2572848 MsG0280006481.01.T01:CDS
CTGTTCTGTTCTGGAGCTGC+TGG 0.323542 2:-2574372 None:intergenic
GGTAGCGGTAGTTGGATTAA+AGG 0.337161 2:+2572700 MsG0280006481.01.T01:CDS
GAGTGTGAAAGCTAAGTATT+TGG 0.342226 2:+2574182 MsG0280006481.01.T01:CDS
GTAGTAGTGGTAGCGGTAGT+TGG 0.346625 2:+2572692 MsG0280006481.01.T01:CDS
AGCTATTGATTCCTATCTTA+AGG 0.367444 2:+2573272 MsG0280006481.01.T01:CDS
CCTTCTTAGGCTTCTGAGAA+TGG 0.374018 2:+2572861 MsG0280006481.01.T01:CDS
AAATGAAAGGCTTCCATTAA+GGG 0.389974 2:+2573963 MsG0280006481.01.T01:CDS
TCACAGGTTCTAGCTGATTC+AGG 0.390652 2:-2573234 None:intergenic
TTCTGAGAAACATATGGGAT+TGG 0.397986 2:+2573095 MsG0280006481.01.T01:CDS
GCAAGTCCTATTTGCAGAAC+AGG 0.399215 2:+2573993 MsG0280006481.01.T01:CDS
TTGAAGATGTTTCAATCCTT+AGG 0.401499 2:+2572497 MsG0280006481.01.T01:CDS
TCTGAGAAACATATGGGATT+GGG 0.407788 2:+2573096 MsG0280006481.01.T01:CDS
CATATATGAATCACGCGAAC+CGG 0.412776 2:+2572018 MsG0280006481.01.T01:CDS
GGAAGTAATTACCTTAAGAT+AGG 0.421004 2:-2573283 None:intergenic
ATATCATTATTATTCCATCT+TGG 0.423799 2:-2572424 None:intergenic
GATTCAACATCTTTCAAAGA+AGG 0.425349 2:-2574042 None:intergenic
CTTTCATGCTCAGAAAGTGT+TGG 0.432520 2:-2573874 None:intergenic
TTCTTCAAAGAGGTCACTCT+TGG 0.443338 2:+2571469 MsG0280006481.01.T01:CDS
AACATCTTTCAAAGAAGGGT+TGG 0.446054 2:-2574037 None:intergenic
GGTTACTGAATTAGAGAAAA+GGG 0.454667 2:+2572912 MsG0280006481.01.T01:CDS
ATAACTATCTTATTCACATC+CGG 0.457064 2:-2572037 None:intergenic
AAAGCTTGTGCTAATCCAAA+AGG 0.459789 2:+2572355 MsG0280006481.01.T01:CDS
ATTGCTGTTGATTTAACAGC+AGG 0.465524 2:+2572118 MsG0280006481.01.T01:CDS
ATCAACTAGTTCCTCCTGAT+TGG 0.465695 2:+2572470 MsG0280006481.01.T01:CDS
GAAGCGACTCTGCCGCGTAA+TGG 0.466966 2:+2573897 MsG0280006481.01.T01:CDS
TCAACTGCAAGACACAAGTA+TGG 0.473817 2:+2571399 MsG0280006481.01.T01:CDS
ATTCAACATCTTTCAAAGAA+GGG 0.475157 2:-2574041 None:intergenic
AACTAGTTCCTCCTGATTGG+TGG 0.478674 2:+2572473 MsG0280006481.01.T01:CDS
AGCTAACTTCCACTTGCATA+AGG 0.482491 2:+2571665 MsG0280006481.01.T01:CDS
ACATCTTCAAACCACCAATC+AGG 0.482701 2:-2572484 None:intergenic
TTACAGAGGTTTCAAGAGAC+AGG 0.493241 2:+2573169 MsG0280006481.01.T01:CDS
ATGACAGAAGATTTAGAAGA+AGG 0.494776 2:+2572181 MsG0280006481.01.T01:CDS
TGGTTACTGAATTAGAGAAA+AGG 0.496556 2:+2572911 MsG0280006481.01.T01:CDS
TGATGATGTTCTTCCTGTGT+AGG 0.497579 2:-2572389 None:intergenic
TGTAACCATTGGTTGAGTAA+AGG 0.498751 2:-2574064 None:intergenic
TCAGCTAGAACCTGTGATGA+TGG 0.501666 2:+2573240 MsG0280006481.01.T01:CDS
GGAACTAGTTGATTCCTACT+TGG 0.503593 2:-2572460 None:intergenic
CATACTTCAGCTTGGAGTAG+TGG 0.506325 2:+2574264 MsG0280006481.01.T01:CDS
TCTAATTCAGTAACCAATGC+AGG 0.508323 2:-2572904 None:intergenic
GGATGTGAATAAGATAGTTA+TGG 0.510860 2:+2572039 MsG0280006481.01.T01:CDS
GTTAAAGGTTGCACCTGCAT+TGG 0.512074 2:+2572891 MsG0280006481.01.T01:CDS
AACTAAATGGCTACAAGGGT+TGG 0.513326 2:+2572606 MsG0280006481.01.T01:CDS
AATAGTAATAGTAGTAGTAG+TGG 0.515974 2:+2572679 MsG0280006481.01.T01:CDS
AGCAGAAGCATACTTCAGCT+TGG 0.516992 2:+2574256 MsG0280006481.01.T01:CDS
AATAGTAGTAGTAGTGGTAG+CGG 0.517826 2:+2572685 MsG0280006481.01.T01:CDS
AGTTGGATTAAAGGCGGCGG+TGG 0.518651 2:+2572709 MsG0280006481.01.T01:CDS
GTCTCTCCTTTATTATAACA+AGG 0.523236 2:-2572979 None:intergenic
CTTCAGCTTGGAGTAGTGGT+TGG 0.523301 2:+2574268 MsG0280006481.01.T01:CDS
TTCGATGAAGCGAGCAATTG+TGG 0.530246 2:+2572649 MsG0280006481.01.T01:CDS
TGATATCCCTGGTGGATTTG+AGG 0.532058 2:+2572063 MsG0280006481.01.T01:CDS
TAACAAAGTGATCAATCCTA+AGG 0.539725 2:-2572513 None:intergenic
CTTGCAGCCAAATTCTGCTA+TGG 0.542630 2:+2572094 MsG0280006481.01.T01:CDS
CAACACTTTCTGAGCATGAA+AGG 0.546369 2:+2573875 MsG0280006481.01.T01:CDS
CCATTCTCAGAAGCCTAAGA+AGG 0.546533 2:-2572861 None:intergenic
TATGCAACTAAATGGCTACA+AGG 0.547334 2:+2572601 MsG0280006481.01.T01:CDS
GGACTTCACATGATTGTAGC+AGG 0.547821 2:+2572730 MsG0280006481.01.T01:CDS
ACTGAATTAGAGAAAAGGGT+TGG 0.548384 2:+2572916 MsG0280006481.01.T01:CDS
TCTATAAAGTCCATCATCAC+AGG 0.549509 2:-2573250 None:intergenic
CAACACACTAAAGTTTGAGC+TGG 0.551730 2:+2574158 MsG0280006481.01.T01:CDS
CATCCTTCTTGGAATGATTG+TGG 0.555236 2:-2574114 None:intergenic
AGATAGCTACCTTATGCAAG+TGG 0.556587 2:-2571674 None:intergenic
ATTTGAAGATTCTCTGACCA+AGG 0.556867 2:-2572301 None:intergenic
ACTGAAGGATTTCTTCAAAG+AGG 0.557934 2:+2571459 MsG0280006481.01.T01:CDS
CCTTAATGCTAAAGCAAGAG+TGG 0.561105 2:+2573125 MsG0280006481.01.T01:CDS
CACAATCATTCCAAGAAGGA+TGG 0.563573 2:+2574115 MsG0280006481.01.T01:CDS
GCTGCTGGAATATTACTTTG+AGG 0.565988 2:-2574357 None:intergenic
AAGCTTGTGCTAATCCAAAA+GGG 0.570071 2:+2572356 MsG0280006481.01.T01:CDS
ATTTGAACAAGAAAATCACT+TGG 0.572128 2:-2571636 None:intergenic
TGAATCCTTTACTCAACCAA+TGG 0.578454 2:+2574059 MsG0280006481.01.T01:CDS
AAACATGGTGTCAAGACTGA+AGG 0.585042 2:+2571444 MsG0280006481.01.T01:CDS
GCAAGACACAAGTATGGTGA+TGG 0.587211 2:+2571405 MsG0280006481.01.T01:CDS
ATAGTTATGGATGATATCCC+TGG 0.588860 2:+2572052 MsG0280006481.01.T01:CDS
GATGCAGCGAGTCTATAGCT+TGG 0.589137 2:+2572332 MsG0280006481.01.T01:CDS
TCAAATGCCTCAAATCCACC+AGG 0.589531 2:-2572070 None:intergenic
ATGCTAAAGCAAGAGTGGCA+AGG 0.595719 2:+2573130 MsG0280006481.01.T01:CDS
CATGAAACAGTATCTTTCTG+AGG 0.597213 2:-2572832 None:intergenic
TGCATGCTGCACAAAATGAA+AGG 0.608887 2:+2573950 MsG0280006481.01.T01:CDS
GGGATAAAATGGTCCTACAC+AGG 0.610206 2:+2572376 MsG0280006481.01.T01:CDS
TGAAAGATACAAGTCCAAGT+AGG 0.614508 2:+2572446 MsG0280006481.01.T01:CDS
TGTTGACAGTTATCTTACAG+AGG 0.625756 2:+2573155 MsG0280006481.01.T01:CDS
GAAACAGTATCTTTCTGAGG+AGG 0.634508 2:-2572829 None:intergenic
ATGCAACTAAATGGCTACAA+GGG 0.636403 2:+2572602 MsG0280006481.01.T01:CDS
ACACCACAATCATTCCAAGA+AGG 0.638741 2:+2574111 MsG0280006481.01.T01:CDS
TTGCTGTTGATTTAACAGCA+GGG 0.649818 2:+2572119 MsG0280006481.01.T01:CDS
GTCTTCAAGCTAAAGAACAA+AGG 0.650300 2:+2572776 MsG0280006481.01.T01:CDS
CTTCACATGATTGTAGCAGG+TGG 0.651151 2:+2572733 MsG0280006481.01.T01:CDS
GCTGTGAGAAGCTTTCACCT+TGG 0.658908 2:+2572284 MsG0280006481.01.T01:CDS
TCTTCAAACCACCAATCAGG+AGG 0.664130 2:-2572481 None:intergenic
ATTCTCACTTCAAACAAACA+TGG 0.669333 2:+2571429 MsG0280006481.01.T01:CDS
GTTATGGATGATATCCCTGG+TGG 0.677226 2:+2572055 MsG0280006481.01.T01:CDS
ATGATGTTGATCTTGTTATG+CGG 0.690885 2:+2573010 MsG0280006481.01.T01:CDS
GTTTCTGGCAATCCATTACG+CGG 0.691677 2:-2573909 None:intergenic
GGTAGTTGGATTAAAGGCGG+CGG 0.693718 2:+2572706 MsG0280006481.01.T01:CDS
AGCGGTAGTTGGATTAAAGG+CGG 0.709972 2:+2572703 MsG0280006481.01.T01:CDS
CAAATGCCTCAAATCCACCA+GGG 0.743591 2:-2572069 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTCAAAATAATTCTTGAAAT+TGG + Chr2:2573622-2573641 MsG0280006481.01.T01:intron 15.0%
!!! AGAATCTAGTATTTTTTTAA+TGG + Chr2:2571549-2571568 MsG0280006481.01.T01:intron 15.0%
!!! ATGTTTTATCTTATTTTAAG+TGG + Chr2:2573384-2573403 MsG0280006481.01.T01:intron 15.0%
!!! TTAATTCCTTGTTATAATAA+AGG + Chr2:2572973-2572992 MsG0280006481.01.T01:CDS 15.0%
!! ACCTATGAGTTTATAATTTA+TGG + Chr2:2571737-2571756 MsG0280006481.01.T01:intron 20.0%
!! ATATCATTATTATTCCATCT+TGG - Chr2:2572427-2572446 None:intergenic 20.0%
!! TCCATAAATTATAAACTCAT+AGG - Chr2:2571741-2571760 None:intergenic 20.0%
!!! AAGTTGAACAAAATTTTGTA+CGG + Chr2:2571848-2571867 MsG0280006481.01.T01:intron 20.0%
!!! ACTTAAATATTCGTTTTTGT+AGG + Chr2:2571800-2571819 MsG0280006481.01.T01:intron 20.0%
!!! ATTCTTAAAAGCATTTTCAA+AGG - Chr2:2571534-2571553 None:intergenic 20.0%
!!! TCAATTCAAAGACTATTTTA+GGG + Chr2:2573729-2573748 MsG0280006481.01.T01:intron 20.0%
!!! TTACTTATTTACCTTTTCAA+TGG + Chr2:2573318-2573337 MsG0280006481.01.T01:intron 20.0%
!!! TTGAGATTTTCTTATCTTAT+AGG - Chr2:2574437-2574456 None:intergenic 20.0%
!!! TTTTTATACTAAGAGAGATT+AGG + Chr2:2571894-2571913 MsG0280006481.01.T01:intron 20.0%
! AACACAAATAAATTCATCAG+TGG - Chr2:2571936-2571955 None:intergenic 25.0%
! AATAAGTAAATCCTAGAAAC+AGG - Chr2:2573307-2573326 None:intergenic 25.0%
! AATAGTAATAGTAGTAGTAG+TGG + Chr2:2572679-2572698 MsG0280006481.01.T01:CDS 25.0%
! AGTGGATAAATATACATAGA+AGG + Chr2:2573402-2573421 MsG0280006481.01.T01:intron 25.0%
! ATAACTATCTTATTCACATC+CGG - Chr2:2572040-2572059 None:intergenic 25.0%
! ATCTAGTATTATTCTAATGC+AGG + Chr2:2571595-2571614 MsG0280006481.01.T01:intron 25.0%
! ATGACATAAAACCATTGAAA+AGG - Chr2:2573332-2573351 None:intergenic 25.0%
! ATTACTGCTATTAAGGTAAA+AGG + Chr2:2572541-2572560 MsG0280006481.01.T01:CDS 25.0%
! ATTCAACATCTTTCAAAGAA+GGG - Chr2:2574044-2574063 None:intergenic 25.0%
! ATTTGAACAAGAAAATCACT+TGG - Chr2:2571639-2571658 None:intergenic 25.0%
! TAATGCATTATGCAACTAAA+TGG + Chr2:2572593-2572612 MsG0280006481.01.T01:CDS 25.0%
!! AGTGATTTTCTTGTTCAAAT+TGG + Chr2:2571639-2571658 MsG0280006481.01.T01:CDS 25.0%
!! CTCAATTCAAAGACTATTTT+AGG + Chr2:2573728-2573747 MsG0280006481.01.T01:intron 25.0%
!!! GTATATTGATGATGAATGTA+TGG + Chr2:2573789-2573808 MsG0280006481.01.T01:intron 25.0%
!!! TCATTTTCTGAGAAACATAT+GGG + Chr2:2573090-2573109 MsG0280006481.01.T01:CDS 25.0%
AAAATGAAAGGCTTCCATTA+AGG + Chr2:2573962-2573981 MsG0280006481.01.T01:CDS 30.0%
AAATGAAAGGCTTCCATTAA+GGG + Chr2:2573963-2573982 MsG0280006481.01.T01:CDS 30.0%
ACAGAAAAACTACTAGAAGA+TGG + Chr2:2574391-2574410 MsG0280006481.01.T01:CDS 30.0%
ATGACAGAAGATTTAGAAGA+AGG + Chr2:2572181-2572200 MsG0280006481.01.T01:CDS 30.0%
ATTCTCACTTCAAACAAACA+TGG + Chr2:2571429-2571448 MsG0280006481.01.T01:CDS 30.0%
CTAATCCAAAAGGGATAAAA+TGG + Chr2:2572365-2572384 MsG0280006481.01.T01:CDS 30.0%
CTACAATTTCAAAGGCAAAT+CGG - Chr2:2573567-2573586 None:intergenic 30.0%
CTTGAAAAAAGTGATTGACT+TGG - Chr2:2574488-2574507 None:intergenic 30.0%
GAGAATGGCAATTATGTTAA+AGG + Chr2:2572876-2572895 MsG0280006481.01.T01:CDS 30.0%
GATTCAACATCTTTCAAAGA+AGG - Chr2:2574045-2574064 None:intergenic 30.0%
GCACTTAATATCCATTAGTA+TGG + Chr2:2573509-2573528 MsG0280006481.01.T01:intron 30.0%
GGAAGTAATTACCTTAAGAT+AGG - Chr2:2573286-2573305 None:intergenic 30.0%
GGATGTGAATAAGATAGTTA+TGG + Chr2:2572039-2572058 MsG0280006481.01.T01:CDS 30.0%
GGTTACTGAATTAGAGAAAA+GGG + Chr2:2572912-2572931 MsG0280006481.01.T01:CDS 30.0%
GTCTCTCCTTTATTATAACA+AGG - Chr2:2572982-2573001 None:intergenic 30.0%
TAACAAAGTGATCAATCCTA+AGG - Chr2:2572516-2572535 None:intergenic 30.0%
TACTAGTGAAGTAAACTAAC+AGG + Chr2:2573846-2573865 MsG0280006481.01.T01:intron 30.0%
TAGAGTCATTACTGCTATTA+AGG + Chr2:2572534-2572553 MsG0280006481.01.T01:CDS 30.0%
TCAGAACTCTACAATTTCAA+AGG - Chr2:2573575-2573594 None:intergenic 30.0%
TCCGTATAAAAGCAAAGTAA+AGG - Chr2:2571781-2571800 None:intergenic 30.0%
TCTACTCATTTCCATACTAA+TGG - Chr2:2573523-2573542 None:intergenic 30.0%
TCTTTCATTGACAAAGTTTC+AGG + Chr2:2573194-2573213 MsG0280006481.01.T01:CDS 30.0%
TGGTGATTCACTCAAATATT+AGG + Chr2:2573759-2573778 MsG0280006481.01.T01:intron 30.0%
TGGTTACTGAATTAGAGAAA+AGG + Chr2:2572911-2572930 MsG0280006481.01.T01:CDS 30.0%
TTCACTAGTAAGAAATCCAA+TGG - Chr2:2573836-2573855 None:intergenic 30.0%
TTGAAGATGTTTCAATCCTT+AGG + Chr2:2572497-2572516 MsG0280006481.01.T01:CDS 30.0%
! ACGAAATTGACTGACTTAAA+AGG + Chr2:2573686-2573705 MsG0280006481.01.T01:intron 30.0%
! ATGATGTTGATCTTGTTATG+CGG + Chr2:2573010-2573029 MsG0280006481.01.T01:CDS 30.0%
! CAAAAATTTCAAGTCCAAGA+TGG + Chr2:2572410-2572429 MsG0280006481.01.T01:CDS 30.0%
! GGAATGAGATTTGAGTTAAT+TGG + Chr2:2572562-2572581 MsG0280006481.01.T01:CDS 30.0%
! TCAGAAAATGACTGTCTTTT+CGG - Chr2:2573081-2573100 None:intergenic 30.0%
! TTTGCAGTACTTTTGCAAAT+TGG + Chr2:2573483-2573502 MsG0280006481.01.T01:intron 30.0%
! TTTGGAGCTTCAAAATGATA+TGG + Chr2:2574200-2574219 MsG0280006481.01.T01:CDS 30.0%
!! AGCTATTGATTCCTATCTTA+AGG + Chr2:2573272-2573291 MsG0280006481.01.T01:CDS 30.0%
!! GCCTTTACTTTGCTTTTATA+CGG + Chr2:2571777-2571796 MsG0280006481.01.T01:intron 30.0%
!! GTCATTTTCTGAGAAACATA+TGG + Chr2:2573089-2573108 MsG0280006481.01.T01:CDS 30.0%
!! TTTGCAAAAGTACTGCAAAT+TGG - Chr2:2573482-2573501 None:intergenic 30.0%
!!! GCTATGTTGTTTTATCATCA+TGG + Chr2:2572236-2572255 MsG0280006481.01.T01:CDS 30.0%
AAAGCTTGTGCTAATCCAAA+AGG + Chr2:2572355-2572374 MsG0280006481.01.T01:CDS 35.0%
AACATCTTTCAAAGAAGGGT+TGG - Chr2:2574040-2574059 None:intergenic 35.0%
AAGCTTGTGCTAATCCAAAA+GGG + Chr2:2572356-2572375 MsG0280006481.01.T01:CDS 35.0%
AATAGTAGTAGTAGTGGTAG+CGG + Chr2:2572685-2572704 MsG0280006481.01.T01:CDS 35.0%
ACTGAAGGATTTCTTCAAAG+AGG + Chr2:2571459-2571478 MsG0280006481.01.T01:CDS 35.0%
ACTGAATTAGAGAAAAGGGT+TGG + Chr2:2572916-2572935 MsG0280006481.01.T01:CDS 35.0%
AGAGGATACTTTCACAACAA+AGG - Chr2:2571968-2571987 None:intergenic 35.0%
AGCAATTCCATAGCAGAATT+TGG - Chr2:2572104-2572123 None:intergenic 35.0%
ATAGTTATGGATGATATCCC+TGG + Chr2:2572052-2572071 MsG0280006481.01.T01:CDS 35.0%
ATGCAACTAAATGGCTACAA+GGG + Chr2:2572602-2572621 MsG0280006481.01.T01:CDS 35.0%
ATGCATCAATTGAGAGTTTC+TGG - Chr2:2573927-2573946 None:intergenic 35.0%
ATTTGAAGATTCTCTGACCA+AGG - Chr2:2572304-2572323 None:intergenic 35.0%
CAGCTTAACTGTTATTCCAT+TGG + Chr2:2573817-2573836 MsG0280006481.01.T01:intron 35.0%
CATGAAACAGTATCTTTCTG+AGG - Chr2:2572835-2572854 None:intergenic 35.0%
CTAGAGTTACACATTTGGTT+TGG + Chr2:2573352-2573371 MsG0280006481.01.T01:intron 35.0%
CTGACTTAAAAGGAATAACG+TGG + Chr2:2573696-2573715 MsG0280006481.01.T01:intron 35.0%
GAGGATACTTTCACAACAAA+GGG - Chr2:2571967-2571986 None:intergenic 35.0%
GAGTGTGAAAGCTAAGTATT+TGG + Chr2:2574182-2574201 MsG0280006481.01.T01:CDS 35.0%
GTCTTCAAGCTAAAGAACAA+AGG + Chr2:2572776-2572795 MsG0280006481.01.T01:CDS 35.0%
TATCCTCTTATATCTCGAAG+TGG + Chr2:2571980-2571999 MsG0280006481.01.T01:intron 35.0%
TATGCAACTAAATGGCTACA+AGG + Chr2:2572601-2572620 MsG0280006481.01.T01:CDS 35.0%
TCTAATTCAGTAACCAATGC+AGG - Chr2:2572907-2572926 None:intergenic 35.0%
TCTATAAAGTCCATCATCAC+AGG - Chr2:2573253-2573272 None:intergenic 35.0%
TCTGAGAAACATATGGGATT+GGG + Chr2:2573096-2573115 MsG0280006481.01.T01:CDS 35.0%
TCTTTACCTGTTCTGCAAAT+AGG - Chr2:2574002-2574021 None:intergenic 35.0%
TGAAAGATACAAGTCCAAGT+AGG + Chr2:2572446-2572465 MsG0280006481.01.T01:CDS 35.0%
TGAATCCTTTACTCAACCAA+TGG + Chr2:2574059-2574078 MsG0280006481.01.T01:CDS 35.0%
TGTTGACAGTTATCTTACAG+AGG + Chr2:2573155-2573174 MsG0280006481.01.T01:CDS 35.0%
TTTCATGCACTTTCCTTCTT+AGG + Chr2:2572848-2572867 MsG0280006481.01.T01:CDS 35.0%
TTTCCACTTCGAGATATAAG+AGG - Chr2:2571986-2572005 None:intergenic 35.0%
! GGTAATTACTTCCTGTTTCT+AGG + Chr2:2573293-2573312 MsG0280006481.01.T01:intron 35.0%
! GTAGTTTTTCTGTTCTGTTC+TGG - Chr2:2574384-2574403 None:intergenic 35.0%
! GTCATCTAGAGTTACACATT+TGG + Chr2:2573347-2573366 MsG0280006481.01.T01:intron 35.0%
! TAGGACCATTTTATCCCTTT+TGG - Chr2:2572373-2572392 None:intergenic 35.0%
! TGTAACCATTGGTTGAGTAA+AGG - Chr2:2574067-2574086 None:intergenic 35.0%
! TTCTGAGAAACATATGGGAT+TGG + Chr2:2573095-2573114 MsG0280006481.01.T01:CDS 35.0%
!! ATTGCTGTTGATTTAACAGC+AGG + Chr2:2572118-2572137 MsG0280006481.01.T01:CDS 35.0%
!! GACTATTTTAGGGACAACTT+TGG + Chr2:2573739-2573758 MsG0280006481.01.T01:intron 35.0%
!! GTTTTTCGGTTTGTAACCAT+TGG - Chr2:2574078-2574097 None:intergenic 35.0%
!! TTGCTGTTGATTTAACAGCA+GGG + Chr2:2572119-2572138 MsG0280006481.01.T01:CDS 35.0%
AAACCGAAAAACACTTCTCG+AGG + Chr2:2574086-2574105 MsG0280006481.01.T01:CDS 40.0%
AACTAAATGGCTACAAGGGT+TGG + Chr2:2572606-2572625 MsG0280006481.01.T01:CDS 40.0%
ACACCACAATCATTCCAAGA+AGG + Chr2:2574111-2574130 MsG0280006481.01.T01:CDS 40.0%
ACATCTTCAAACCACCAATC+AGG - Chr2:2572487-2572506 None:intergenic 40.0%
ACTTGCACAACTACCCTTAA+TGG - Chr2:2573979-2573998 None:intergenic 40.0%
AGATAGCTACCTTATGCAAG+TGG - Chr2:2571677-2571696 None:intergenic 40.0%
AGCTAACTTCCACTTGCATA+AGG + Chr2:2571665-2571684 MsG0280006481.01.T01:CDS 40.0%
ATCAACTAGTTCCTCCTGAT+TGG + Chr2:2572470-2572489 MsG0280006481.01.T01:CDS 40.0%
CAACACACTAAAGTTTGAGC+TGG + Chr2:2574158-2574177 MsG0280006481.01.T01:CDS 40.0%
CAACACTTTCTGAGCATGAA+AGG + Chr2:2573875-2573894 MsG0280006481.01.T01:CDS 40.0%
CACAATCATTCCAAGAAGGA+TGG + Chr2:2574115-2574134 MsG0280006481.01.T01:CDS 40.0%
CATATATGAATCACGCGAAC+CGG + Chr2:2572018-2572037 MsG0280006481.01.T01:CDS 40.0%
CATCCTTCTTGGAATGATTG+TGG - Chr2:2574117-2574136 None:intergenic 40.0%
CCACTCTTGCTTTAGCATTA+AGG - Chr2:2573128-2573147 None:intergenic 40.0%
CCTTAATGCTAAAGCAAGAG+TGG + Chr2:2573125-2573144 MsG0280006481.01.T01:CDS 40.0%
GCTGCTGGAATATTACTTTG+AGG - Chr2:2574360-2574379 None:intergenic 40.0%
TAAAAGGAATAACGTGGTCG+AGG + Chr2:2573702-2573721 MsG0280006481.01.T01:intron 40.0%
TCAACTGCAAGACACAAGTA+TGG + Chr2:2571399-2571418 MsG0280006481.01.T01:CDS 40.0%
TGCATGCTGCACAAAATGAA+AGG + Chr2:2573950-2573969 MsG0280006481.01.T01:CDS 40.0%
TTAACAGCAGGGAACATTTC+TGG + Chr2:2572130-2572149 MsG0280006481.01.T01:CDS 40.0%
TTACAGAGGTTTCAAGAGAC+AGG + Chr2:2573169-2573188 MsG0280006481.01.T01:CDS 40.0%
TTCGCAAACCAATTCACGTT+TGG - Chr2:2573457-2573476 None:intergenic 40.0%
TTCTTCAAAGAGGTCACTCT+TGG + Chr2:2571469-2571488 MsG0280006481.01.T01:CDS 40.0%
! AAACATGGTGTCAAGACTGA+AGG + Chr2:2571444-2571463 MsG0280006481.01.T01:CDS 40.0%
! CTTTCATGCTCAGAAAGTGT+TGG - Chr2:2573877-2573896 None:intergenic 40.0%
! GAAACAGTATCTTTCTGAGG+AGG - Chr2:2572832-2572851 None:intergenic 40.0%
! GGAACTAGTTGATTCCTACT+TGG - Chr2:2572463-2572482 None:intergenic 40.0%
! TGATGATGTTCTTCCTGTGT+AGG - Chr2:2572392-2572411 None:intergenic 40.0%
!! CACACTCGCATAATTTGCTA+CGG + Chr2:2573431-2573450 MsG0280006481.01.T01:intron 40.0%
AACTAGTTCCTCCTGATTGG+TGG + Chr2:2572473-2572492 MsG0280006481.01.T01:CDS 45.0%
AGCGGTAGTTGGATTAAAGG+CGG + Chr2:2572703-2572722 MsG0280006481.01.T01:CDS 45.0%
ATGCTAAAGCAAGAGTGGCA+AGG + Chr2:2573130-2573149 MsG0280006481.01.T01:CDS 45.0%
CAAATGCCTCAAATCCACCA+GGG - Chr2:2572072-2572091 None:intergenic 45.0%
CATACTTCAGCTTGGAGTAG+TGG + Chr2:2574264-2574283 MsG0280006481.01.T01:CDS 45.0%
CCATTCTCAGAAGCCTAAGA+AGG - Chr2:2572864-2572883 None:intergenic 45.0%
CTTCACATGATTGTAGCAGG+TGG + Chr2:2572733-2572752 MsG0280006481.01.T01:CDS 45.0%
CTTGCAGCCAAATTCTGCTA+TGG + Chr2:2572094-2572113 MsG0280006481.01.T01:CDS 45.0%
GCAAGACACAAGTATGGTGA+TGG + Chr2:2571405-2571424 MsG0280006481.01.T01:CDS 45.0%
GCAAGTCCTATTTGCAGAAC+AGG + Chr2:2573993-2574012 MsG0280006481.01.T01:CDS 45.0%
GGACTTCACATGATTGTAGC+AGG + Chr2:2572730-2572749 MsG0280006481.01.T01:CDS 45.0%
GGGATAAAATGGTCCTACAC+AGG + Chr2:2572376-2572395 MsG0280006481.01.T01:CDS 45.0%
GTTAAAGGTTGCACCTGCAT+TGG + Chr2:2572891-2572910 MsG0280006481.01.T01:CDS 45.0%
GTTATGGATGATATCCCTGG+TGG + Chr2:2572055-2572074 MsG0280006481.01.T01:CDS 45.0%
TAGCAGTTGTCCATCCTTCT+TGG - Chr2:2574128-2574147 None:intergenic 45.0%
TCAAATGCCTCAAATCCACC+AGG - Chr2:2572073-2572092 None:intergenic 45.0%
TCAGCTAGAACCTGTGATGA+TGG + Chr2:2573240-2573259 MsG0280006481.01.T01:CDS 45.0%
TCTTCAAACCACCAATCAGG+AGG - Chr2:2572484-2572503 None:intergenic 45.0%
TTCGATGAAGCGAGCAATTG+TGG + Chr2:2572649-2572668 MsG0280006481.01.T01:CDS 45.0%
! AGCAGAAGCATACTTCAGCT+TGG + Chr2:2574256-2574275 MsG0280006481.01.T01:CDS 45.0%
! CCTTCTTAGGCTTCTGAGAA+TGG + Chr2:2572861-2572880 MsG0280006481.01.T01:CDS 45.0%
! GGTAGCGGTAGTTGGATTAA+AGG + Chr2:2572700-2572719 MsG0280006481.01.T01:CDS 45.0%
! TCACAGGTTCTAGCTGATTC+AGG - Chr2:2573237-2573256 None:intergenic 45.0%
!! GTTTCTGGCAATCCATTACG+CGG - Chr2:2573912-2573931 None:intergenic 45.0%
!! TGATATCCCTGGTGGATTTG+AGG + Chr2:2572063-2572082 MsG0280006481.01.T01:CDS 45.0%
!!! TCGCCTCGAGAAGTGTTTTT+CGG - Chr2:2574092-2574111 None:intergenic 45.0%
CTTCAGCTTGGAGTAGTGGT+TGG + Chr2:2574268-2574287 MsG0280006481.01.T01:CDS 50.0%
GATGCAGCGAGTCTATAGCT+TGG + Chr2:2572332-2572351 MsG0280006481.01.T01:CDS 50.0%
GCTGTGAGAAGCTTTCACCT+TGG + Chr2:2572284-2572303 MsG0280006481.01.T01:CDS 50.0%
GGTAGTTGGATTAAAGGCGG+CGG + Chr2:2572706-2572725 MsG0280006481.01.T01:CDS 50.0%
TGCTACGGCCAAACGTGAAT+TGG + Chr2:2573446-2573465 MsG0280006481.01.T01:intron 50.0%
!! GTAGTAGTGGTAGCGGTAGT+TGG + Chr2:2572692-2572711 MsG0280006481.01.T01:CDS 50.0%
AGTTGGATTAAAGGCGGCGG+TGG + Chr2:2572709-2572728 MsG0280006481.01.T01:CDS 55.0%
!! CTGTTCTGTTCTGGAGCTGC+TGG - Chr2:2574375-2574394 None:intergenic 55.0%
GAAGCGACTCTGCCGCGTAA+TGG + Chr2:2573897-2573916 MsG0280006481.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr2 gene 2571378 2574565 2571378 ID=MsG0280006481.01;Name=MsG0280006481.01
Chr2 mRNA 2571378 2574565 2571378 ID=MsG0280006481.01.T01;Parent=MsG0280006481.01;Name=MsG0280006481.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0.66|0.75|1|1|1|4|134|677
Chr2 exon 2571378 2571490 2571378 ID=MsG0280006481.01.T01:exon:474;Parent=MsG0280006481.01.T01
Chr2 exon 2571617 2571686 2571617 ID=MsG0280006481.01.T01:exon:475;Parent=MsG0280006481.01.T01
Chr2 exon 2572007 2573293 2572007 ID=MsG0280006481.01.T01:exon:476;Parent=MsG0280006481.01.T01
Chr2 exon 2573868 2574565 2573868 ID=MsG0280006481.01.T01:exon:477;Parent=MsG0280006481.01.T01
Chr2 CDS 2571378 2571490 2571378 ID=MsG0280006481.01.T01:cds;Parent=MsG0280006481.01.T01
Chr2 CDS 2571617 2571686 2571617 ID=MsG0280006481.01.T01:cds;Parent=MsG0280006481.01.T01
Chr2 CDS 2572007 2573293 2572007 ID=MsG0280006481.01.T01:cds;Parent=MsG0280006481.01.T01
Chr2 CDS 2573868 2574431 2573868 ID=MsG0280006481.01.T01:cds;Parent=MsG0280006481.01.T01
Chr2 three_prime_UTR 2574432 2574565 2574432 ID=MsG0280006481.01.T01:three_prime_utr;Parent=MsG0280006481.01.T01
Gene Sequence

>MsG0280006481.01.T01

ATGTGGGAATCTGAGAGTGATTCAACTGCAAGACACAAGTATGGTGATGGAATTCTCACTTCAAACAAACATGGTGTCAAGACTGAAGGATTTCTTCAAAGAGGTCACTCTTGGTATGTTGCAACTGACGTTCCAAGTGATTTTCTTGTTCAAATTGGAGAAGCTAACTTCCACTTGCATAAGCTGAGTAGAATCATATATGAATCACGCGAACCGGATGTGAATAAGATAGTTATGGATGATATCCCTGGTGGATTTGAGGCATTTGAACTTGCAGCCAAATTCTGCTATGGAATTGCTGTTGATTTAACAGCAGGGAACATTTCTGGACTAAGATGTGCTGCTGAGTATCTAGAAATGACAGAAGATTTAGAAGAAGGCAATCTTATATTCAAAACAGAAGCATTTCTTAGCTATGTTGTTTTATCATCATGGAGAGACTCTATAGTAGTTTTGAAAAGCTGTGAGAAGCTTTCACCTTGGTCAGAGAATCTTCAAATCGTTCGAAGATGCAGCGAGTCTATAGCTTGGAAAGCTTGTGCTAATCCAAAAGGGATAAAATGGTCCTACACAGGAAGAACATCATCAAAAATTTCAAGTCCAAGATGGAATAATAATGATATGAAAGATACAAGTCCAAGTAGGAATCAACTAGTTCCTCCTGATTGGTGGTTTGAAGATGTTTCAATCCTTAGGATTGATCACTTTGTTAGAGTCATTACTGCTATTAAGGTAAAAGGAATGAGATTTGAGTTAATTGGTGCTGCAATAATGCATTATGCAACTAAATGGCTACAAGGGTTGGTTAGTGAAACATCAATCACATTCGATGAAGCGAGCAATTGTGGTAATAGTAATAGTAATAGTAGTAGTAGTGGTAGCGGTAGTTGGATTAAAGGCGGCGGTGGACTTCACATGATTGTAGCAGGTGGAACTAGAGATGAAACTTCAAGTCTTCAAGCTAAAGAACAAAGGATGATAATTGAGAGTCTTACAAGCATTATTCCTCCTCAGAAAGATACTGTTTCATGCACTTTCCTTCTTAGGCTTCTGAGAATGGCAATTATGTTAAAGGTTGCACCTGCATTGGTTACTGAATTAGAGAAAAGGGTTGGAATGCAATTCGAGCAAGCTACACTTGCTGATCTGTTAATTCCTTGTTATAATAAAGGAGAGACAATGATGTATGATGTTGATCTTGTTATGCGGTTGCTTGAGCATTTTCTTGTACAAGAAGTGACTGAAAATTCTAGTCCGAAAAGACAGTCATTTTCTGAGAAACATATGGGATTGGGATGTAACCTTAATGCTAAAGCAAGAGTGGCAAGGCTTGTTGACAGTTATCTTACAGAGGTTTCAAGAGACAGGAATCTTTCATTGACAAAGTTTCAGGTACTTGCTGAAGCTTTGCCTGAATCAGCTAGAACCTGTGATGATGGACTTTATAGAGCTATTGATTCCTATCTTAAGGCACATCCAACACTTTCTGAGCATGAAAGGAAGCGACTCTGCCGCGTAATGGATTGCCAGAAACTCTCAATTGATGCATGCATGCATGCTGCACAAAATGAAAGGCTTCCATTAAGGGTAGTTGTGCAAGTCCTATTTGCAGAACAGGTAAAGATAAGTACTGCATTATCCAACCCTTCTTTGAAAGATGTTGAATCCTTTACTCAACCAATGGTTACAAACCGAAAAACACTTCTCGAGGCGACACCACAATCATTCCAAGAAGGATGGACAACTGCTAAAAAAGATGTCAACACACTAAAGTTTGAGCTGGAGAGTGTGAAAGCTAAGTATTTGGAGCTTCAAAATGATATGGAAAATTTGCAGAAACAATTTGATAAGATGTTAAAGCAGAAGCATACTTCAGCTTGGAGTAGTGGTTGGAAGAAATTAAGCAAACTTACAAAGATGACAAATGTACAAAATCATGATCATGATCATGATAATTCACCTCAAAGTAATATTCCAGCAGCTCCAGAACAGAACAGAAAAACTACTAGAAGATGGAGAAATTCAATATCTTGA

Protein sequence

>MsG0280006481.01.T01

MWESESDSTARHKYGDGILTSNKHGVKTEGFLQRGHSWYVATDVPSDFLVQIGEANFHLHKLSRIIYESREPDVNKIVMDDIPGGFEAFELAAKFCYGIAVDLTAGNISGLRCAAEYLEMTEDLEEGNLIFKTEAFLSYVVLSSWRDSIVVLKSCEKLSPWSENLQIVRRCSESIAWKACANPKGIKWSYTGRTSSKISSPRWNNNDMKDTSPSRNQLVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELIGAAIMHYATKWLQGLVSETSITFDEASNCGNSNSNSSSSGSGSWIKGGGGLHMIVAGGTRDETSSLQAKEQRMIIESLTSIIPPQKDTVSCTFLLRLLRMAIMLKVAPALVTELEKRVGMQFEQATLADLLIPCYNKGETMMYDVDLVMRLLEHFLVQEVTENSSPKRQSFSEKHMGLGCNLNAKARVARLVDSYLTEVSRDRNLSLTKFQVLAEALPESARTCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSIDACMHAAQNERLPLRVVVQVLFAEQVKISTALSNPSLKDVESFTQPMVTNRKTLLEATPQSFQEGWTTAKKDVNTLKFELESVKAKYLELQNDMENLQKQFDKMLKQKHTSAWSSGWKKLSKLTKMTNVQNHDHDHDNSPQSNIPAAPEQNRKTTRRWRNSIS*