AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480024030.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480024030.01.T01 MTR_7g105390 92.857 56 4 0 9 64 309 364 1.61e-31 118
MsG0480024030.01.T01 MTR_7g105390 89.130 46 5 0 74 119 444 489 7.57e-20 86.3
MsG0480024030.01.T01 MTR_6g046670 84.444 45 7 0 121 165 128 172 5.09e-20 83.2
MsG0480024030.01.T01 MTR_7g105390 89.130 46 5 0 74 119 410 455 6.58e-20 86.3
MsG0480024030.01.T01 MTR_7g013520 76.087 46 11 0 120 165 74 119 1.56e-19 81.6
MsG0480024030.01.T01 MTR_1g054905 69.811 53 16 0 120 172 105 157 1.11e-18 78.6
MsG0480024030.01.T01 MTR_7g105400 80.435 46 9 0 74 119 444 489 7.38e-18 80.5
MsG0480024030.01.T01 MTR_7g105400 52.727 55 21 1 9 63 314 363 2.21e-12 64.7
MsG0480024030.01.T01 MTR_2g055490 62.222 45 17 0 121 165 12 56 1.18e-13 64.3
MsG0480024030.01.T01 MTR_6g089560 60.870 46 18 0 120 165 120 165 1.22e-12 63.9
MsG0480024030.01.T01 MTR_8g099580 63.043 46 17 0 120 165 210 255 1.96e-12 64.3
MsG0480024030.01.T01 MTR_1g022215 55.319 47 21 0 119 165 17 63 3.03e-12 60.1
MsG0480024030.01.T01 MTR_8g098925 64.444 45 16 0 120 164 69 113 1.70e-11 59.7
MsG0480024030.01.T01 MTR_1g017840 60.870 46 18 0 120 165 82 127 1.74e-11 59.7
MsG0480024030.01.T01 MTR_0093s0070 63.043 46 17 0 120 165 127 172 2.66e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480024030.01.T01 AT2G24280 33.333 114 71 2 6 114 299 412 2.00e-13 67.8
MsG0480024030.01.T01 AT2G24280 32.692 104 65 2 6 106 299 400 2.42e-13 67.4
MsG0480024030.01.T01 AT2G24280 60.000 45 18 0 74 118 436 480 7.39e-12 63.2
MsG0480024030.01.T01 AT5G65760 55.556 45 20 0 74 118 450 494 6.48e-11 60.5
MsG0480024030.01.T01 AT5G65760 29.126 103 69 2 6 106 314 414 8.63e-11 60.1

Find 37 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCACATCTTTAAGCCATTT+TGG 0.110981 4:-92722621 None:intergenic
GTGGATGTGGGTGAAGCTTT+AGG 0.191019 4:+92724239 MsG0480024030.01.T01:CDS
TGACTATGACTTTGAATTTC+GGG 0.212303 4:+92718368 None:intergenic
TTGACTATGACTTTGAATTT+CGG 0.285346 4:+92718367 None:intergenic
TGCAGAAGGTGCGTTTGTTC+TGG 0.290592 4:+92724184 MsG0480024030.01.T01:CDS
GACATACCCTTGTACGGTTT+CGG 0.305306 4:+92724217 MsG0480024030.01.T01:CDS
CTTCCTTAGTTGAGTACCTT+AGG 0.320241 4:-92722596 None:intergenic
TGGATGTGGGTGAAGCTTTA+GGG 0.333872 4:+92724240 MsG0480024030.01.T01:CDS
ATTTAAATCGAAACATTTAG+AGG 0.367749 4:-92718497 None:intergenic
CAACTAAGGAAGATCCAAAA+TGG 0.369906 4:+92722607 MsG0480024030.01.T01:CDS
CATTCTGATCCTCATGATCT+TGG 0.386353 4:+92718523 MsG0480024030.01.T01:CDS
TTGTACGGTTTCGGTGGATG+TGG 0.466562 4:+92724226 MsG0480024030.01.T01:CDS
GGCTGCACTCTGCTTTGCAA+TGG 0.480012 4:+92724261 MsG0480024030.01.T01:CDS
TCTGATCCTCATGATCTTGG+AGG 0.492421 4:+92718526 MsG0480024030.01.T01:CDS
AGTATATACTACAACTATAG+TGG 0.507865 4:+92718472 MsG0480024030.01.T01:CDS
ACATCCACCGAAACCGTACA+AGG 0.519969 4:-92724224 None:intergenic
GAGCTCATCATGTGGACCTA+AGG 0.534583 4:+92722580 MsG0480024030.01.T01:CDS
GGCTATTGACAGCTCAGTGA+CGG 0.540552 4:+92718414 MsG0480024030.01.T01:CDS
ATACCCTTGTACGGTTTCGG+TGG 0.544174 4:+92724220 MsG0480024030.01.T01:CDS
GGACCTAAGGTACTCAACTA+AGG 0.552928 4:+92722593 MsG0480024030.01.T01:CDS
GACTATGACATACCCTTGTA+CGG 0.556469 4:+92724211 MsG0480024030.01.T01:CDS
TCTTGGAGGATGGCAGTGGC+AGG 0.556500 4:+92718540 MsG0480024030.01.T01:CDS
GAATTGAAATTGAACAATTG+GGG 0.557451 4:-92718581 None:intergenic
GCTATTGACAGCTCAGTGAC+GGG 0.557627 4:+92718415 MsG0480024030.01.T01:CDS
ATGATCTTGGAGGATGGCAG+TGG 0.563815 4:+92718536 MsG0480024030.01.T01:CDS
ATCCTCATGATCTTGGAGGA+TGG 0.584392 4:+92718530 MsG0480024030.01.T01:CDS
TGTACGGTTTCGGTGGATGT+GGG 0.584410 4:+92724227 MsG0480024030.01.T01:CDS
GACTATGACTTTGAATTTCG+GGG 0.602483 4:+92718369 None:intergenic
ATTTGTGTTCGCGATGCAGA+AGG 0.608630 4:+92724170 MsG0480024030.01.T01:CDS
CAAAATGGCTTAAAGATGTG+AGG 0.610415 4:+92722622 MsG0480024030.01.T01:CDS
TGCCATCCTCCAAGATCATG+AGG 0.611309 4:-92718532 None:intergenic
ATTCATTATTCAGATGTGTG+AGG 0.638900 4:+92718393 MsG0480024030.01.T01:CDS
GGGTATAGGAGCTCATCATG+TGG 0.648201 4:+92722572 MsG0480024030.01.T01:intron
ATTGCTATAGTTGCTAAACA+AGG 0.650750 4:+92722465 MsG0480024030.01.T01:CDS
GTGATATGCAGTTGACAATG+TGG 0.676912 4:+92724288 MsG0480024030.01.T01:CDS
AATTGAAATTGAACAATTGG+GGG 0.685895 4:-92718580 None:intergenic
CATCCACCGAAACCGTACAA+GGG 0.712749 4:-92724223 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATATATAAATTTTAAA+AGG - Chr4:92722984-92723003 None:intergenic 0.0%
!! AAATTAATTATGCATTATTA+GGG - Chr4:92720633-92720652 None:intergenic 10.0%
!! ACAAATTATTAACAAATATA+AGG - Chr4:92723403-92723422 None:intergenic 10.0%
!! TATCTCTATTAAAAAAATAA+TGG - Chr4:92723047-92723066 None:intergenic 10.0%
!! TTTATTAAGTAGTAATTTAA+TGG - Chr4:92718774-92718793 None:intergenic 10.0%
!!! AACTAAAAAGATATTTTTAT+CGG + Chr4:92720040-92720059 MsG0480024030.01.T01:intron 10.0%
!!! ATATATAAATTTTAAAAGGA+TGG - Chr4:92722980-92722999 None:intergenic 10.0%
!!! ATGATCAAATTTTATATTTT+AGG - Chr4:92723929-92723948 None:intergenic 10.0%
!!! TTAATTTGTAATCAAATTTT+GGG + Chr4:92719014-92719033 MsG0480024030.01.T01:intron 10.0%
!!! TTTAATTTGTAATCAAATTT+TGG + Chr4:92719013-92719032 MsG0480024030.01.T01:intron 10.0%
!!! TTTATAACACTTTTAATTTT+AGG - Chr4:92723518-92723537 None:intergenic 10.0%
!!! TTTGTTAATAATTTGTAATT+AGG + Chr4:92723407-92723426 MsG0480024030.01.T01:intron 10.0%
!! AACACTTACAAAAAAATTAA+TGG + Chr4:92723567-92723586 MsG0480024030.01.T01:intron 15.0%
!! AATAAAATTAAGTGAAAGAT+AGG + Chr4:92720982-92721001 MsG0480024030.01.T01:intron 15.0%
!! ACACTTACAAAAAAATTAAT+GGG + Chr4:92723568-92723587 MsG0480024030.01.T01:intron 15.0%
!! ATAAACTTTGTTACATATTA+TGG - Chr4:92719080-92719099 None:intergenic 15.0%
!! ATATATAGCATTGTTAATAA+TGG - Chr4:92722328-92722347 None:intergenic 15.0%
!! ATTAACAATGCTATATATTT+AGG + Chr4:92722330-92722349 MsG0480024030.01.T01:intron 15.0%
!! ATTACAAATTAAATCAATAG+TGG - Chr4:92719006-92719025 None:intergenic 15.0%
!! CAAATTAATTATGCATTATT+AGG - Chr4:92720634-92720653 None:intergenic 15.0%
!! GTATAAAATTTGATTCAATT+TGG + Chr4:92722925-92722944 MsG0480024030.01.T01:intron 15.0%
!!! AATTTTATTTTTTTGACTTC+AGG - Chr4:92723434-92723453 None:intergenic 15.0%
!!! ATACAAGTTTTTTTTTATTG+AGG + Chr4:92723537-92723556 MsG0480024030.01.T01:intron 15.0%
!!! ATCTATTTAAAATCTTCTAA+TGG - Chr4:92723322-92723341 None:intergenic 15.0%
!!! GGTATTATATTTTTTTTTTG+AGG + Chr4:92721116-92721135 MsG0480024030.01.T01:intron 15.0%
!!! GTTTGGTTATTTTTTAAAAT+AGG + Chr4:92720870-92720889 MsG0480024030.01.T01:intron 15.0%
!!! TAATAGTAAACTCTATTTTT+TGG - Chr4:92723749-92723768 None:intergenic 15.0%
!!! TAATTTGTAATCAAATTTTG+GGG + Chr4:92719015-92719034 MsG0480024030.01.T01:intron 15.0%
!!! TCAAATTTTATATTTTAGGA+TGG - Chr4:92723925-92723944 None:intergenic 15.0%
!!! TCATCATTAGATTTTTAATT+TGG + Chr4:92722106-92722125 MsG0480024030.01.T01:intron 15.0%
!!! TGAGATAATTTTATTTAATG+TGG - Chr4:92721682-92721701 None:intergenic 15.0%
!!! TTTTTGGTTTTTTTTTAGTA+GGG - Chr4:92718925-92718944 None:intergenic 15.0%
!!! TTTTTGTGAAAATGATATTT+CGG + Chr4:92723697-92723716 MsG0480024030.01.T01:intron 15.0%
!!! TTTTTTGGTTTTTTTTTAGT+AGG - Chr4:92718926-92718945 None:intergenic 15.0%
!! AAAAATCATAGTCGAAAAAT+AGG + Chr4:92719304-92719323 MsG0480024030.01.T01:intron 20.0%
!! AACAAGAAATGTTGAAATTT+GGG - Chr4:92719773-92719792 None:intergenic 20.0%
!! AAGTAAAGATTATTGAAAGT+TGG + Chr4:92722652-92722671 MsG0480024030.01.T01:intron 20.0%
!! ATAGTAATTATAAACTCACA+TGG - Chr4:92722083-92722102 None:intergenic 20.0%
!! ATTAATATATCTAGTCAAGT+TGG - Chr4:92723860-92723879 None:intergenic 20.0%
!! ATTTAAATCGAAACATTTAG+AGG - Chr4:92718500-92718519 None:intergenic 20.0%
!! CAACAAGAAAAAAAAACTAA+GGG + Chr4:92722885-92722904 MsG0480024030.01.T01:intron 20.0%
!! TACAAAATAGTGTCAAATTA+AGG + Chr4:92722700-92722719 MsG0480024030.01.T01:intron 20.0%
!! TATGATGATAGAAGATAATA+AGG - Chr4:92722303-92722322 None:intergenic 20.0%
!! TTAGATTAATTGGTTAAAGT+GGG - Chr4:92720705-92720724 None:intergenic 20.0%
!! TTTGATACTATGTTGAAATT+TGG - Chr4:92719581-92719600 None:intergenic 20.0%
!!! AATTACGTTTTGATTTTACT+TGG - Chr4:92720897-92720916 None:intergenic 20.0%
!!! ATAAATTTTAAAAGGATGGA+TGG - Chr4:92722976-92722995 None:intergenic 20.0%
!!! ATTACGTTTTGATTTTACTT+GGG - Chr4:92720896-92720915 None:intergenic 20.0%
!!! ATTTTATATTTTAGGATGGA+AGG - Chr4:92723921-92723940 None:intergenic 20.0%
!!! ATTTTTAGAACGATGTAATT+CGG - Chr4:92719943-92719962 None:intergenic 20.0%
!!! CATTGTTTTTGTTTGAAATT+TGG - Chr4:92718953-92718972 None:intergenic 20.0%
!!! GAAAACATCATATTTTTCAA+TGG + Chr4:92722244-92722263 MsG0480024030.01.T01:intron 20.0%
!!! GTAACAAAGTTTATTTCTTT+TGG + Chr4:92719086-92719105 MsG0480024030.01.T01:intron 20.0%
!!! GTTTGACTGATATTTTTTTT+TGG + Chr4:92723770-92723789 MsG0480024030.01.T01:intron 20.0%
!!! TAATTTTAGGTTTATTGAGT+AGG - Chr4:92723505-92723524 None:intergenic 20.0%
!!! TTGAAATTTGGTGTTTTTTT+TGG - Chr4:92718941-92718960 None:intergenic 20.0%
!!! TTTCGTTCAAATTATTTTCA+TGG - Chr4:92720748-92720767 None:intergenic 20.0%
!!! TTTTGGTTTTTTTTTAGTAG+GGG - Chr4:92718924-92718943 None:intergenic 20.0%
! AAAAACAATGCACAAATCAA+TGG + Chr4:92718963-92718982 MsG0480024030.01.T01:intron 25.0%
! AAAAACACTAAAACAACTCT+TGG - Chr4:92723615-92723634 None:intergenic 25.0%
! AAGATAGGTGAAATACATAA+CGG + Chr4:92720997-92721016 MsG0480024030.01.T01:intron 25.0%
! AATTGAAATTGAACAATTGG+GGG - Chr4:92718583-92718602 None:intergenic 25.0%
! AATTGTTGTGATTCTTTCAA+TGG + Chr4:92721088-92721107 MsG0480024030.01.T01:intron 25.0%
! ACAAGAAATGTTGAAATTTG+GGG - Chr4:92719772-92719791 None:intergenic 25.0%
! ACATTGTAATATACATGAGT+CGG + Chr4:92718706-92718725 MsG0480024030.01.T01:intron 25.0%
! ACTGTCAACATCATATATTT+CGG + Chr4:92721525-92721544 MsG0480024030.01.T01:intron 25.0%
! AGATGTTGTGTAATTAATAC+AGG - Chr4:92720564-92720583 None:intergenic 25.0%
! AGTATATACTACAACTATAG+TGG + Chr4:92718472-92718491 MsG0480024030.01.T01:CDS 25.0%
! AGTGTAAATCTAATATGTCA+TGG - Chr4:92721301-92721320 None:intergenic 25.0%
! ATATAAATGTAACATCGATG+CGG + Chr4:92724113-92724132 MsG0480024030.01.T01:intron 25.0%
! ATGTTGTGTAATTAATACAG+GGG - Chr4:92720562-92720581 None:intergenic 25.0%
! ATTGTTGTGATTCTTTCAAT+GGG + Chr4:92721089-92721108 MsG0480024030.01.T01:intron 25.0%
! CAAAAATACTTTGTACATAC+AGG + Chr4:92721907-92721926 MsG0480024030.01.T01:intron 25.0%
! CCAATTATACATTTAGAAAG+GGG - Chr4:92720270-92720289 None:intergenic 25.0%
! CCCAATTATACATTTAGAAA+GGG - Chr4:92720271-92720290 None:intergenic 25.0%
! CCCTTTCTAAATGTATAATT+GGG + Chr4:92720268-92720287 MsG0480024030.01.T01:intron 25.0%
! CCTTTCTAAATGTATAATTG+GGG + Chr4:92720269-92720288 MsG0480024030.01.T01:intron 25.0%
! CTTGAATGAGTTATCATTTA+CGG - Chr4:92721403-92721422 None:intergenic 25.0%
! GAACAAGAAATGTTGAAATT+TGG - Chr4:92719774-92719793 None:intergenic 25.0%
! GAATTGAAATTGAACAATTG+GGG - Chr4:92718584-92718603 None:intergenic 25.0%
! GATGTTGTGTAATTAATACA+GGG - Chr4:92720563-92720582 None:intergenic 25.0%
! GCAACAAGAAAAAAAAACTA+AGG + Chr4:92722884-92722903 MsG0480024030.01.T01:intron 25.0%
! GGAATTGAAATTGAACAATT+GGG - Chr4:92718585-92718604 None:intergenic 25.0%
! GTTAGATTAATTGGTTAAAG+TGG - Chr4:92720706-92720725 None:intergenic 25.0%
! GTTATATACAAACAATGTTG+TGG + Chr4:92723240-92723259 MsG0480024030.01.T01:intron 25.0%
! TAGTATGTGAATTGTAAATG+TGG - Chr4:92721264-92721283 None:intergenic 25.0%
! TCATGGTTAAAAGCAATAAT+TGG + Chr4:92719229-92719248 MsG0480024030.01.T01:intron 25.0%
! TGGAATTGAAATTGAACAAT+TGG - Chr4:92718586-92718605 None:intergenic 25.0%
! TTATTGAGTAGGCAATAATA+TGG - Chr4:92723494-92723513 None:intergenic 25.0%
! TTTGAGAATAATGATGATTG+TGG - Chr4:92718606-92718625 None:intergenic 25.0%
!! AATGGCCATTATGAATTTTT+CGG - Chr4:92721611-92721630 None:intergenic 25.0%
!! ATGAGAAGATTCAAGTTATT+TGG - Chr4:92719169-92719188 None:intergenic 25.0%
!! ATGGATTAATTGATCAATAG+TGG - Chr4:92723028-92723047 None:intergenic 25.0%
!! ATTTTATGTCCAACGATAAT+CGG - Chr4:92719431-92719450 None:intergenic 25.0%
!! GTTCAAATTATTTTCATGGA+GGG - Chr4:92720744-92720763 None:intergenic 25.0%
!! TATGCAATTTTGAATTGGTT+AGG - Chr4:92719270-92719289 None:intergenic 25.0%
!! TTCAAATTATTTTCATGGAG+GGG - Chr4:92720743-92720762 None:intergenic 25.0%
!! TTTGGTATGCAATTTTGAAT+TGG - Chr4:92719275-92719294 None:intergenic 25.0%
!! TTTTCGACTATGATTTTTGT+GGG - Chr4:92719302-92719321 None:intergenic 25.0%
!!! AAGAGAAAGCATTATATTAG+TGG + Chr4:92721870-92721889 MsG0480024030.01.T01:intron 25.0%
!!! ATAAGTGAAGATCATTTTTG+TGG - Chr4:92719057-92719076 None:intergenic 25.0%
!!! GATTAGCATTTAACTTTTGT+GGG - Chr4:92719144-92719163 None:intergenic 25.0%
!!! TAAGTTACTAGTCTTATCTT+TGG + Chr4:92723995-92724014 MsG0480024030.01.T01:intron 25.0%
!!! TGATTAGCATTTAACTTTTG+TGG - Chr4:92719145-92719164 None:intergenic 25.0%
!!! TTTTTCGACTATGATTTTTG+TGG - Chr4:92719303-92719322 None:intergenic 25.0%
AAAGCTTATGATTCACTGAA+TGG - Chr4:92721651-92721670 None:intergenic 30.0%
AAATGAGTTTAGGGGTTTAA+AGG - Chr4:92720662-92720681 None:intergenic 30.0%
AAATTCTGATGTAATCCAGT+TGG - Chr4:92722055-92722074 None:intergenic 30.0%
AACTGGATTACATCAGAATT+TGG + Chr4:92722054-92722073 MsG0480024030.01.T01:intron 30.0%
AATAGTTCTCAAAAGATCTG+CGG + Chr4:92722222-92722241 MsG0480024030.01.T01:intron 30.0%
AATTATTTGCGTGTGTTTGT+GGG + Chr4:92722552-92722571 MsG0480024030.01.T01:intron 30.0%
AATTCTGATGTAATCCAGTT+GGG - Chr4:92722054-92722073 None:intergenic 30.0%
ACATTTATATCTTCTGACCA+CGG - Chr4:92724103-92724122 None:intergenic 30.0%
ACTAACAAAGTCTACATTCA+GGG + Chr4:92720460-92720479 MsG0480024030.01.T01:intron 30.0%
AGATATATTCTAATAGCCAG+TGG - Chr4:92721735-92721754 None:intergenic 30.0%
ATAACCAAACCCTATTTCAT+AGG - Chr4:92720860-92720879 None:intergenic 30.0%
ATAATCTACTACATCTCACA+CGG + Chr4:92720074-92720093 MsG0480024030.01.T01:intron 30.0%
ATATACAAACAATGTTGTGG+TGG + Chr4:92723243-92723262 MsG0480024030.01.T01:intron 30.0%
ATCAAAACGAAAGTCTTCTT+GGG + Chr4:92721227-92721246 MsG0480024030.01.T01:intron 30.0%
ATCAAAGCTTGTCGAATTAA+GGG + Chr4:92719595-92719614 MsG0480024030.01.T01:intron 30.0%
ATCGAATCATTAACCAACAA+CGG + Chr4:92724038-92724057 MsG0480024030.01.T01:intron 30.0%
ATGAGACAATTACAATGAGA+TGG - Chr4:92721828-92721847 None:intergenic 30.0%
ATTCATTATTCAGATGTGTG+AGG + Chr4:92718393-92718412 MsG0480024030.01.T01:CDS 30.0%
ATTGCTATAGTTGCTAAACA+AGG + Chr4:92722465-92722484 MsG0480024030.01.T01:CDS 30.0%
CCCCAATTATACATTTAGAA+AGG - Chr4:92720272-92720291 None:intergenic 30.0%
CCCCTTTCTAAATGTATAAT+TGG + Chr4:92720267-92720286 MsG0480024030.01.T01:intron 30.0%
CTAACTCAACCTTACAAAAT+TGG - Chr4:92719748-92719767 None:intergenic 30.0%
CTGTCAACATCATATATTTC+GGG + Chr4:92721526-92721545 MsG0480024030.01.T01:intron 30.0%
CTTCTCCGAAAAATTCATAA+TGG + Chr4:92721603-92721622 MsG0480024030.01.T01:intron 30.0%
GAACTTAATAGACTCTGTAA+TGG - Chr4:92721629-92721648 None:intergenic 30.0%
GATATATTCTAATAGCCAGT+GGG - Chr4:92721734-92721753 None:intergenic 30.0%
GATCAATAGTGGTTATTCAA+TGG - Chr4:92723017-92723036 None:intergenic 30.0%
GTGAGATGTAGTAGATTATT+TGG - Chr4:92720073-92720092 None:intergenic 30.0%
GTGTTTCGTTTGACTATTAA+TGG - Chr4:92720145-92720164 None:intergenic 30.0%
TAATATGTCATGGATAGAAG+AGG - Chr4:92721291-92721310 None:intergenic 30.0%
TAATTATTTGCGTGTGTTTG+TGG + Chr4:92722551-92722570 MsG0480024030.01.T01:intron 30.0%
TACACAAATATACCCTTTGA+AGG + Chr4:92721784-92721803 MsG0480024030.01.T01:intron 30.0%
TATCAAAGCTTGTCGAATTA+AGG + Chr4:92719594-92719613 MsG0480024030.01.T01:intron 30.0%
TCTTAAACAGTAAACCACTT+TGG + Chr4:92720581-92720600 MsG0480024030.01.T01:intron 30.0%
TGGATCATGAAATGAGTTTA+GGG - Chr4:92720671-92720690 None:intergenic 30.0%
TGTTATGTCTGATAAATTGG+AGG + Chr4:92722733-92722752 MsG0480024030.01.T01:intron 30.0%
TTGCAATTTATCTGCATTCA+GGG + Chr4:92720489-92720508 MsG0480024030.01.T01:intron 30.0%
TTGCATATTATCTGCATTCA+GGG - Chr4:92720340-92720359 None:intergenic 30.0%
TTGGACATAAAATGACACTT+GGG + Chr4:92719438-92719457 MsG0480024030.01.T01:intron 30.0%
TTGGATCATGAAATGAGTTT+AGG - Chr4:92720672-92720691 None:intergenic 30.0%
TTGTTGTGATTCTTTCAATG+GGG + Chr4:92721090-92721109 MsG0480024030.01.T01:intron 30.0%
TTTGCAATTTATCTGCATTC+AGG + Chr4:92720488-92720507 MsG0480024030.01.T01:intron 30.0%
TTTGCATATTATCTGCATTC+AGG - Chr4:92720341-92720360 None:intergenic 30.0%
! AGCTACAAAATTGATAGTCA+TGG + Chr4:92719212-92719231 MsG0480024030.01.T01:intron 30.0%
! CGTTCAAATTATTTTCATGG+AGG - Chr4:92720745-92720764 None:intergenic 30.0%
! GCTTTCGATACTCTAATTTT+GGG - Chr4:92721377-92721396 None:intergenic 30.0%
! TGCTTTCGATACTCTAATTT+TGG - Chr4:92721378-92721397 None:intergenic 30.0%
! TGTAGTTAAAGTGGTTTTCA+TGG - Chr4:92723164-92723183 None:intergenic 30.0%
! TTTGACACTATTTTGTAGCT+AGG - Chr4:92722697-92722716 None:intergenic 30.0%
!! ACTTTACAAGCTGATTTGTA+AGG + Chr4:92719544-92719563 MsG0480024030.01.T01:intron 30.0%
!! ATTTTAAAAGGATGGATGGA+TGG - Chr4:92722972-92722991 None:intergenic 30.0%
!! GCTTGTTATGTCTGATAAAT+TGG + Chr4:92722730-92722749 MsG0480024030.01.T01:intron 30.0%
!! TTATCTAGAATTTTGCACCT+TGG + Chr4:92719376-92719395 MsG0480024030.01.T01:intron 30.0%
!! TTATGAATTTTTCGGAGAAG+TGG - Chr4:92721603-92721622 None:intergenic 30.0%
!! TTTGTGTGCTATTTCAAAAG+TGG + Chr4:92723462-92723481 MsG0480024030.01.T01:intron 30.0%
!!! ATAATGATGCTTATTTTGCG+TGG - Chr4:92719360-92719379 None:intergenic 30.0%
!!! ATGATTTTTGTGGGAGTATT+TGG - Chr4:92719293-92719312 None:intergenic 30.0%
!!! TAATGATGCTTATTTTGCGT+GGG - Chr4:92719359-92719378 None:intergenic 30.0%
!!! TCTTTTTAGTTGAGATGTGT+AGG - Chr4:92720031-92720050 None:intergenic 30.0%
!!! TTTTAGGATGGAAGGATTAA+CGG - Chr4:92723913-92723932 None:intergenic 30.0%
AAATCTCACATGGGATAGAT+AGG + Chr4:92719484-92719503 MsG0480024030.01.T01:intron 35.0%
AATTTCAAAATCGCAAGGGT+GGG + Chr4:92719704-92719723 MsG0480024030.01.T01:intron 35.0%
ACAAATCAGCTTGTAAAGTG+AGG - Chr4:92719543-92719562 None:intergenic 35.0%
ACAATCTTGATCGATGAATC+TGG - Chr4:92719895-92719914 None:intergenic 35.0%
ACCTCAATTTCAAAATCGCA+AGG + Chr4:92719699-92719718 MsG0480024030.01.T01:intron 35.0%
AGAGTTCATCGTGATTAAGT+GGG - Chr4:92718749-92718768 None:intergenic 35.0%
ATCTATCCCATGTGAGATTT+GGG - Chr4:92719484-92719503 None:intergenic 35.0%
CAAAATGGCTTAAAGATGTG+AGG + Chr4:92722622-92722641 MsG0480024030.01.T01:CDS 35.0%
CAACTAAGGAAGATCCAAAA+TGG + Chr4:92722607-92722626 MsG0480024030.01.T01:CDS 35.0%
CACAAATACCAATACCTGTA+CGG - Chr4:92724157-92724176 None:intergenic 35.0%
CATTTATATCTTCTGACCAC+GGG - Chr4:92724102-92724121 None:intergenic 35.0%
CCTCAATTTCAAAATCGCAA+GGG + Chr4:92719700-92719719 MsG0480024030.01.T01:intron 35.0%
CTTGAGAAGAGTAGATAAAG+AGG + Chr4:92719510-92719529 MsG0480024030.01.T01:intron 35.0%
GAAAAACCCAAATCTCACAT+GGG + Chr4:92719475-92719494 MsG0480024030.01.T01:intron 35.0%
GACTAACAAAGTCTACATTC+AGG + Chr4:92720459-92720478 MsG0480024030.01.T01:intron 35.0%
GACTAACGAAGTTACATTCA+GGG + Chr4:92720396-92720415 MsG0480024030.01.T01:intron 35.0%
GATCAAAACGAAAGTCTTCT+TGG + Chr4:92721226-92721245 MsG0480024030.01.T01:intron 35.0%
GCCATTATGAATTCCAGTTA+GGG - Chr4:92721562-92721581 None:intergenic 35.0%
GGATCATGAAATGAGTTTAG+GGG - Chr4:92720670-92720689 None:intergenic 35.0%
GGATGAGGAGTTTATTTGTT+GGG - Chr4:92719975-92719994 None:intergenic 35.0%
GTTGGACATAAAATGACACT+TGG + Chr4:92719437-92719456 MsG0480024030.01.T01:intron 35.0%
TAAAGTGGGATAAGTCTGTT+TGG - Chr4:92720691-92720710 None:intergenic 35.0%
TAGAGTTCATCGTGATTAAG+TGG - Chr4:92718750-92718769 None:intergenic 35.0%
TATCTATCCCATGTGAGATT+TGG - Chr4:92719485-92719504 None:intergenic 35.0%
TCAGGGACTAAATTGACTAA+CGG + Chr4:92720413-92720432 MsG0480024030.01.T01:intron 35.0%
TCCCTAACTGGAATTCATAA+TGG + Chr4:92721558-92721577 MsG0480024030.01.T01:intron 35.0%
TCGATCTAGATGCAAGTTAT+AGG - Chr4:92724023-92724042 None:intergenic 35.0%
TGACTAACGAAGTTACATTC+AGG + Chr4:92720395-92720414 MsG0480024030.01.T01:intron 35.0%
TGGACATAAAATGACACTTG+GGG + Chr4:92719439-92719458 MsG0480024030.01.T01:intron 35.0%
TGGATGAGGAGTTTATTTGT+TGG - Chr4:92719976-92719995 None:intergenic 35.0%
TGGATTACATCAGAATTTGG+TGG + Chr4:92722057-92722076 MsG0480024030.01.T01:intron 35.0%
TGTTCAGAGAAGAGAAAGTT+AGG - Chr4:92720193-92720212 None:intergenic 35.0%
TGTTGTGATTCTTTCAATGG+GGG + Chr4:92721091-92721110 MsG0480024030.01.T01:intron 35.0%
TTAGAACGATGTAATTCGGT+TGG - Chr4:92719939-92719958 None:intergenic 35.0%
TTAGTTGAGATGTGTAGGTT+GGG - Chr4:92720026-92720045 None:intergenic 35.0%
TTCCATATTATCTTCTGCGA+TGG + Chr4:92719791-92719810 MsG0480024030.01.T01:intron 35.0%
TTGAATTCTTCCGTGAATGT+TGG - Chr4:92721462-92721481 None:intergenic 35.0%
TTTAGTTGAGATGTGTAGGT+TGG - Chr4:92720027-92720046 None:intergenic 35.0%
! AACCCAATATGCTTTTGTGA+AGG - Chr4:92721759-92721778 None:intergenic 35.0%
! ACCCAATATGCTTTTGTGAA+GGG - Chr4:92721758-92721777 None:intergenic 35.0%
! ACGGTTGGTTAGTGAATATT+AGG - Chr4:92723894-92723913 None:intergenic 35.0%
! ATCTCTCGTATTAGTCGTTT+TGG - Chr4:92723813-92723832 None:intergenic 35.0%
! ATTTTGTAGCTAGGTCTTGA+TGG - Chr4:92722688-92722707 None:intergenic 35.0%
! CCTTACAAGCCAATTTTGTA+AGG + Chr4:92719736-92719755 MsG0480024030.01.T01:intron 35.0%
! CTCACATCTTTAAGCCATTT+TGG - Chr4:92722624-92722643 None:intergenic 35.0%
! CTGATTTGTAAGGTTGAGTT+AGG + Chr4:92719554-92719573 MsG0480024030.01.T01:intron 35.0%
! CTTGTCGATTGTAGTTAAAG+TGG - Chr4:92723173-92723192 None:intergenic 35.0%
! TCCCTTCACAAAAGCATATT+GGG + Chr4:92721754-92721773 MsG0480024030.01.T01:intron 35.0%
! TTCGATACTCTAATTTTGGG+AGG - Chr4:92721374-92721393 None:intergenic 35.0%
!! AAATACATAACGGTGTCGTT+TGG + Chr4:92721007-92721026 MsG0480024030.01.T01:intron 35.0%
!! AATGAAGGGTACTCAGTAAA+AGG - Chr4:92719858-92719877 None:intergenic 35.0%
!! AGTCGTTTTGGATCGAATAT+CGG - Chr4:92723801-92723820 None:intergenic 35.0%
!! AGTGAAGATCATTTTTGTGG+TGG - Chr4:92719054-92719073 None:intergenic 35.0%
!! CCTTACAAAATTGGCTTGTA+AGG - Chr4:92719739-92719758 None:intergenic 35.0%
!! TAATTTTGGGAGGCAATAGT+TGG - Chr4:92721364-92721383 None:intergenic 35.0%
!! TAGTTGGTCTTGTTAGAACT+TGG - Chr4:92721348-92721367 None:intergenic 35.0%
!!! CACTTGGGGACTTTTTTATT+TGG + Chr4:92719453-92719472 MsG0480024030.01.T01:intron 35.0%
!!! TTTTGTTTTGATGCGATCCT+TGG - Chr4:92720114-92720133 None:intergenic 35.0%
AACCTTACAAACCGCTTGTA+AGG - Chr4:92719672-92719691 None:intergenic 40.0%
ACATTGTTGTGGTTGACGAA+GGG + Chr4:92723193-92723212 MsG0480024030.01.T01:intron 40.0%
ACCTCTACCTGTGACAATAA+GGG + Chr4:92719827-92719846 MsG0480024030.01.T01:intron 40.0%
ACTTGTTCTCCGATTATCGT+TGG + Chr4:92719419-92719438 MsG0480024030.01.T01:intron 40.0%
AGGAGGCTCGTTAGATTAAT+TGG - Chr4:92720715-92720734 None:intergenic 40.0%
AGGGTCGTTCCTATGAAATA+GGG + Chr4:92720848-92720867 MsG0480024030.01.T01:intron 40.0%
AGGTAGTGATATTGCGTGTT+CGG - Chr4:92720238-92720257 None:intergenic 40.0%
AGGTTGAAGATTCACCAAAG+TGG - Chr4:92720598-92720617 None:intergenic 40.0%
AGTAGGGGATTGTTGTAGAT+CGG - Chr4:92718909-92718928 None:intergenic 40.0%
ATCTTGATCGATGAATCTGG+AGG - Chr4:92719892-92719911 None:intergenic 40.0%
ATTTCAAAATCGCAAGGGTG+GGG + Chr4:92719705-92719724 MsG0480024030.01.T01:intron 40.0%
CAATCGACAAGACATTGTTG+TGG + Chr4:92723182-92723201 MsG0480024030.01.T01:intron 40.0%
CAATTTCAAAATCGCAAGGG+TGG + Chr4:92719703-92719722 MsG0480024030.01.T01:intron 40.0%
CACCATCGCAGAAGATAATA+TGG - Chr4:92719796-92719815 None:intergenic 40.0%
CATTCTGATCCTCATGATCT+TGG + Chr4:92718523-92718542 MsG0480024030.01.T01:CDS 40.0%
CCTTCGCTAATTCCTTCAAA+GGG - Chr4:92721799-92721818 None:intergenic 40.0%
CGTTCCTATGAAATAGGGTT+TGG + Chr4:92720853-92720872 MsG0480024030.01.T01:intron 40.0%
CTCCAAAAGATAAGTTGCCA+AGG - Chr4:92719396-92719415 None:intergenic 40.0%
CTTCCTTAGTTGAGTACCTT+AGG - Chr4:92722599-92722618 None:intergenic 40.0%
GACTATGACATACCCTTGTA+CGG + Chr4:92724211-92724230 MsG0480024030.01.T01:CDS 40.0%
GGAAAAACCCAAATCTCACA+TGG + Chr4:92719474-92719493 MsG0480024030.01.T01:intron 40.0%
GGAATATCCCTTATTGTCAC+AGG - Chr4:92719837-92719856 None:intergenic 40.0%
GGATTGTGGATGATGCAAAA+AGG - Chr4:92721713-92721732 None:intergenic 40.0%
GGCCATTATGAATTCCAGTT+AGG - Chr4:92721563-92721582 None:intergenic 40.0%
GGGTTTATAAACTCCCTAAC+TGG + Chr4:92721546-92721565 MsG0480024030.01.T01:intron 40.0%
GTGATATGCAGTTGACAATG+TGG + Chr4:92724288-92724307 MsG0480024030.01.T01:CDS 40.0%
TACAAACAATGTTGTGGTGG+TGG + Chr4:92723246-92723265 MsG0480024030.01.T01:intron 40.0%
TAGTCACTATGTCCCTGAAT+GGG + Chr4:92720294-92720313 MsG0480024030.01.T01:intron 40.0%
TATGCAAAACAGTCCCTACA+TGG + Chr4:92720353-92720372 MsG0480024030.01.T01:intron 40.0%
TATTAGGGAAGCAGTGTTTG+AGG - Chr4:92720618-92720637 None:intergenic 40.0%
TCAATGGTTTAAGAGACCCT+TGG + Chr4:92722260-92722279 MsG0480024030.01.T01:intron 40.0%
TCCCTACATGGTCAATTTCA+GGG + Chr4:92720365-92720384 MsG0480024030.01.T01:intron 40.0%
TCCCTGAAATTGACCATGTA+GGG - Chr4:92720369-92720388 None:intergenic 40.0%
TCCTTCGCTAATTCCTTCAA+AGG - Chr4:92721800-92721819 None:intergenic 40.0%
TCTTGATCGATGAATCTGGA+GGG - Chr4:92719891-92719910 None:intergenic 40.0%
TGTGGATGATGCAAAAAGGA+AGG - Chr4:92721709-92721728 None:intergenic 40.0%
TTAGAACTTGGTCGATCTCA+AGG - Chr4:92721336-92721355 None:intergenic 40.0%
TTAGTCACTATGTCCCTGAA+TGG + Chr4:92720293-92720312 MsG0480024030.01.T01:intron 40.0%
TTGACTGACCACTTAGATTC+CGG - Chr4:92721985-92722004 None:intergenic 40.0%
TTGTTGTAGATCGGTGTAAC+AGG - Chr4:92718900-92718919 None:intergenic 40.0%
! ACAGGTTGTGGTGATCATTT+TGG - Chr4:92718882-92718901 None:intergenic 40.0%
! ACCGAGCCTCTAAAAACTAT+GGG - Chr4:92721142-92721161 None:intergenic 40.0%
! AGTCACTTTAGTCCCTGAAT+GGG - Chr4:92720535-92720554 None:intergenic 40.0%
! AGTGAGATGATAATGCCCAA+AGG + Chr4:92721935-92721954 MsG0480024030.01.T01:intron 40.0%
! CACCTTGGCAACTTATCTTT+TGG + Chr4:92719391-92719410 MsG0480024030.01.T01:intron 40.0%
! CAGGTTGTGGTGATCATTTT+GGG - Chr4:92718881-92718900 None:intergenic 40.0%
! CTCCCTTCACAAAAGCATAT+TGG + Chr4:92721753-92721772 MsG0480024030.01.T01:intron 40.0%
! CTTGGCAACTTATCTTTTGG+AGG + Chr4:92719394-92719413 MsG0480024030.01.T01:intron 40.0%
! CTTGGTGCGTTAATAGGTTT+AGG - Chr4:92719624-92719643 None:intergenic 40.0%
! TAGCTAGGTCTTGATGGTAT+TGG - Chr4:92722682-92722701 None:intergenic 40.0%
! TAGTCACTTTAGTCCCTGAA+TGG - Chr4:92720381-92720400 None:intergenic 40.0%
! TGTTTGTTGAGAGACTTCGA+AGG - Chr4:92721204-92721223 None:intergenic 40.0%
!! GTCGTTTTGGATCGAATATC+GGG - Chr4:92723800-92723819 None:intergenic 40.0%
!! TACAAGGCTTTGAGGAATTC+AGG - Chr4:92721437-92721456 None:intergenic 40.0%
!! TGAATTTTTCGGAGAAGTGG+AGG - Chr4:92721600-92721619 None:intergenic 40.0%
!! TTGAGGCCCATAGTTTTTAG+AGG + Chr4:92721133-92721152 MsG0480024030.01.T01:intron 40.0%
!!! CCCTTGCGATTTTGAAATTG+AGG - Chr4:92719703-92719722 None:intergenic 40.0%
AACTAGATAGTCTCCTTCGC+AGG + Chr4:92720828-92720847 MsG0480024030.01.T01:intron 45.0%
AAGGCTATGAGAATGGTCGT+TGG + Chr4:92723275-92723294 MsG0480024030.01.T01:intron 45.0%
ACTACACCGACATCCATCTA+CGG + Chr4:92719995-92720014 MsG0480024030.01.T01:intron 45.0%
ACTAGATAGTCTCCTTCGCA+GGG + Chr4:92720829-92720848 MsG0480024030.01.T01:intron 45.0%
AGAGAAGAGAAAGTTAGGCG+CGG - Chr4:92720188-92720207 None:intergenic 45.0%
AGGATGGAAGGATTAACGGT+TGG - Chr4:92723909-92723928 None:intergenic 45.0%
AGTCACTATGTCCCTGAATG+GGG + Chr4:92720295-92720314 MsG0480024030.01.T01:intron 45.0%
AGTGATATTGCGTGTTCGGT+TGG - Chr4:92720234-92720253 None:intergenic 45.0%
ATCCTCATGATCTTGGAGGA+TGG + Chr4:92718530-92718549 MsG0480024030.01.T01:CDS 45.0%
ATTTGTGTTCGCGATGCAGA+AGG + Chr4:92724170-92724189 MsG0480024030.01.T01:CDS 45.0%
CACCTCTACCTGTGACAATA+AGG + Chr4:92719826-92719845 MsG0480024030.01.T01:intron 45.0%
CACCTTACAAGCGGTTTGTA+AGG + Chr4:92719667-92719686 MsG0480024030.01.T01:intron 45.0%
CAGGGTCGTTCCTATGAAAT+AGG + Chr4:92720847-92720866 MsG0480024030.01.T01:intron 45.0%
CATTGTTGTGGTTGACGAAG+GGG + Chr4:92723194-92723213 MsG0480024030.01.T01:intron 45.0%
CCTTGTGTTGTGTGTTTCGA+CGG - Chr4:92718802-92718821 None:intergenic 45.0%
CGTGATTAAGTGGGTGTCTA+CGG - Chr4:92718740-92718759 None:intergenic 45.0%
CTTATTGTCACAGGTAGAGG+TGG - Chr4:92719828-92719847 None:intergenic 45.0%
CTTGATCGATGAATCTGGAG+GGG - Chr4:92719890-92719909 None:intergenic 45.0%
CTTGTGTTGTGTGTTTCGAC+GGG - Chr4:92718801-92718820 None:intergenic 45.0%
GACATACCCTTGTACGGTTT+CGG + Chr4:92724217-92724236 MsG0480024030.01.T01:CDS 45.0%
GACATTGTTGTGGTTGACGA+AGG + Chr4:92723192-92723211 MsG0480024030.01.T01:intron 45.0%
GATGTAATCCAGTTGGGTCT+TGG - Chr4:92722048-92722067 None:intergenic 45.0%
GCATTGAATCAGCACGAACT+TGG - Chr4:92722168-92722187 None:intergenic 45.0%
GCCTTGTAGTCCAACATTCA+CGG + Chr4:92721449-92721468 MsG0480024030.01.T01:intron 45.0%
GGTGCGTTAATAGGTTTAGG+CGG - Chr4:92719621-92719640 None:intergenic 45.0%
GTAAAAGGGGGGAAAACGAA+TGG + Chr4:92721047-92721066 MsG0480024030.01.T01:intron 45.0%
GTCACTCCTACGTCGTAAAA+GGG + Chr4:92721033-92721052 MsG0480024030.01.T01:intron 45.0%
GTCCCTACATGGTCAATTTC+AGG + Chr4:92720364-92720383 MsG0480024030.01.T01:intron 45.0%
GTCCCTGAAATTGACCATGT+AGG - Chr4:92720370-92720389 None:intergenic 45.0%
GTGATTCTTTCAATGGGGGT+GGG + Chr4:92721095-92721114 MsG0480024030.01.T01:intron 45.0%
TACAAACCGCTTGTAAGGTG+AGG - Chr4:92719667-92719686 None:intergenic 45.0%
TAGATCGGTGTAACAGGTTG+TGG - Chr4:92718894-92718913 None:intergenic 45.0%
TCACTCCTACGTCGTAAAAG+GGG + Chr4:92721034-92721053 MsG0480024030.01.T01:intron 45.0%
TCCCTTATTGTCACAGGTAG+AGG - Chr4:92719831-92719850 None:intergenic 45.0%
TCCGTGAATGTTGGACTACA+AGG - Chr4:92721453-92721472 None:intergenic 45.0%
TCCTTACTGCTTGCTCCTTT+GGG - Chr4:92721953-92721972 None:intergenic 45.0%
TCTAATAGCCAGTGGGATTG+TGG - Chr4:92721727-92721746 None:intergenic 45.0%
TCTGATCCTCATGATCTTGG+AGG + Chr4:92718526-92718545 MsG0480024030.01.T01:CDS 45.0%
TGACTGACCACTTAGATTCC+GGG - Chr4:92721984-92722003 None:intergenic 45.0%
TGATGCGATCCTTGGTTAGA+GGG - Chr4:92720106-92720125 None:intergenic 45.0%
TGCGAAGGAGACTATCTAGT+TGG - Chr4:92720829-92720848 None:intergenic 45.0%
TGGATGTGGGTGAAGCTTTA+GGG + Chr4:92724240-92724259 MsG0480024030.01.T01:CDS 45.0%
TGTCACTCCTACGTCGTAAA+AGG + Chr4:92721032-92721051 MsG0480024030.01.T01:intron 45.0%
TGTGATTCTTTCAATGGGGG+TGG + Chr4:92721094-92721113 MsG0480024030.01.T01:intron 45.0%
TGTTGGACTACAAGGCTTTG+AGG - Chr4:92721445-92721464 None:intergenic 45.0%
TTCCTTACTGCTTGCTCCTT+TGG - Chr4:92721954-92721973 None:intergenic 45.0%
TTGATGCGATCCTTGGTTAG+AGG - Chr4:92720107-92720126 None:intergenic 45.0%
TTGCGTGTGTTTGTGGGTAT+AGG + Chr4:92722558-92722577 MsG0480024030.01.T01:intron 45.0%
! ATTTTCATGGAGGGGTAGTG+AGG - Chr4:92720735-92720754 None:intergenic 45.0%
! CACCGAGCCTCTAAAAACTA+TGG - Chr4:92721143-92721162 None:intergenic 45.0%
! CCCTTTGAAGGAATTAGCGA+AGG + Chr4:92721796-92721815 MsG0480024030.01.T01:intron 45.0%
! GCATTTTCCCGGAATCTAAG+TGG + Chr4:92721974-92721993 MsG0480024030.01.T01:intron 45.0%
! GGACCTAAGGTACTCAACTA+AGG + Chr4:92722593-92722612 MsG0480024030.01.T01:CDS 45.0%
! GTCACTTTAGTCCCTGAATG+GGG - Chr4:92720534-92720553 None:intergenic 45.0%
! TTAGAAAGGGGCGTGAATGT+AGG - Chr4:92720258-92720277 None:intergenic 45.0%
! TTGAGATGTGTAGGTTGGGA+TGG - Chr4:92720022-92720041 None:intergenic 45.0%
!! AACAATGTTGTGGTGGTGGT+AGG + Chr4:92723250-92723269 MsG0480024030.01.T01:intron 45.0%
!! ACCAAGCCCAAAGAGTGTTT+GGG + Chr4:92719638-92719657 MsG0480024030.01.T01:intron 45.0%
!! AGGCTTTGAGGAATTCAGGT+TGG - Chr4:92721433-92721452 None:intergenic 45.0%
!! GCCCATAGTTTTTAGAGGCT+CGG + Chr4:92721138-92721157 MsG0480024030.01.T01:intron 45.0%
!! TTTGGGCTTGGTGCGTTAAT+AGG - Chr4:92719630-92719649 None:intergenic 45.0%
!!! GCAGTAAGGAAGCATTTTCC+CGG + Chr4:92721963-92721982 MsG0480024030.01.T01:intron 45.0%
!!! TTTTTTTATTGAAAAAAATA+AGG - Chr4:92723373-92723392 None:intergenic 5.0%
AAATGAGCGCGCGAATCAAG+GGG - Chr4:92723647-92723666 None:intergenic 50.0%
ACATCCACCGAAACCGTACA+AGG - Chr4:92724227-92724246 None:intergenic 50.0%
ACGTAGTACCAAGACCCAAC+TGG + Chr4:92722037-92722056 MsG0480024030.01.T01:intron 50.0%
ACTCCTACGTCGTAAAAGGG+GGG + Chr4:92721036-92721055 MsG0480024030.01.T01:intron 50.0%
AGGACGCCCAAACACTCTTT+GGG - Chr4:92719647-92719666 None:intergenic 50.0%
AGGGGCTCGAAGCAAATGAA+GGG - Chr4:92719872-92719891 None:intergenic 50.0%
ATACCCTTGTACGGTTTCGG+TGG + Chr4:92724220-92724239 MsG0480024030.01.T01:CDS 50.0%
ATGATCTTGGAGGATGGCAG+TGG + Chr4:92718536-92718555 MsG0480024030.01.T01:CDS 50.0%
CAAATGAGCGCGCGAATCAA+GGG - Chr4:92723648-92723667 None:intergenic 50.0%
CACACAACACAAGGTGTGCA+AGG + Chr4:92718808-92718827 MsG0480024030.01.T01:intron 50.0%
CACGTCAACCGTACAGGTAT+TGG + Chr4:92724146-92724165 MsG0480024030.01.T01:intron 50.0%
CACTCCTACGTCGTAAAAGG+GGG + Chr4:92721035-92721054 MsG0480024030.01.T01:intron 50.0%
CATCCACCGAAACCGTACAA+GGG - Chr4:92724226-92724245 None:intergenic 50.0%
CCGTCGAAACACACAACACA+AGG + Chr4:92718799-92718818 MsG0480024030.01.T01:intron 50.0%
CTAACGGAGTCTGCATCATC+AGG + Chr4:92720429-92720448 MsG0480024030.01.T01:intron 50.0%
CTCGACAACACCAAATCACG+TGG + Chr4:92724070-92724089 MsG0480024030.01.T01:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG + Chr4:92720520-92720539 MsG0480024030.01.T01:intron 50.0%
GACGAATCGTTCCCCATTCA+GGG - Chr4:92720539-92720520 None:intergenic 50.0%
GAGAAGAGAAAGTTAGGCGC+GGG - Chr4:92720187-92720206 None:intergenic 50.0%
GAGCTCATCATGTGGACCTA+AGG + Chr4:92722580-92722599 MsG0480024030.01.T01:CDS 50.0%
GATATTGCGTGTTCGGTTGG+CGG - Chr4:92720231-92720250 None:intergenic 50.0%
GATGGTCCGTAGATGGATGT+CGG - Chr4:92720004-92720023 None:intergenic 50.0%
GCTATTGACAGCTCAGTGAC+GGG + Chr4:92718415-92718434 MsG0480024030.01.T01:CDS 50.0%
GGCTATTGACAGCTCAGTGA+CGG + Chr4:92718414-92718433 MsG0480024030.01.T01:CDS 50.0%
GGGCATTATCATCTCACTGC+AGG - Chr4:92721933-92721952 None:intergenic 50.0%
GGGTATAGGAGCTCATCATG+TGG + Chr4:92722572-92722591 MsG0480024030.01.T01:intron 50.0%
GGGTCTTGGTACTACGTTGT+AGG - Chr4:92722034-92722053 None:intergenic 50.0%
GGTTTAAGAGACCCTTGGAG+TGG + Chr4:92722265-92722284 MsG0480024030.01.T01:intron 50.0%
GTAGATGGATGTCGGTGTAG+TGG - Chr4:92719996-92720015 None:intergenic 50.0%
GTAGGCGAAGGCTATGAGAA+TGG + Chr4:92723268-92723287 MsG0480024030.01.T01:intron 50.0%
GTGGATGTGGGTGAAGCTTT+AGG + Chr4:92724239-92724258 MsG0480024030.01.T01:CDS 50.0%
TATACCCTCCACCACTCCAA+GGG - Chr4:92722279-92722298 None:intergenic 50.0%
TCTTCTCACGTCAACCGTAC+AGG + Chr4:92724140-92724159 MsG0480024030.01.T01:intron 50.0%
TGACGAATCGTTCCCCATTC+AGG + Chr4:92720519-92720538 MsG0480024030.01.T01:intron 50.0%
TGACGAATCGTTCCCCATTC+AGG - Chr4:92720538-92720519 None:intergenic 50.0%
TGCATCATCCACAATCCCAC+TGG + Chr4:92721716-92721735 MsG0480024030.01.T01:intron 50.0%
TGCCATCCTCCAAGATCATG+AGG - Chr4:92718535-92718554 None:intergenic 50.0%
TGTACGGTTTCGGTGGATGT+GGG + Chr4:92724227-92724246 MsG0480024030.01.T01:CDS 50.0%
TTAAGAGACCCTTGGAGTGG+TGG + Chr4:92722268-92722287 MsG0480024030.01.T01:intron 50.0%
TTGAGAGACTTCGAAGGAGC+AGG - Chr4:92721198-92721217 None:intergenic 50.0%
TTGTACGGTTTCGGTGGATG+TGG + Chr4:92724226-92724245 MsG0480024030.01.T01:CDS 50.0%
TTGTCACAGGTAGAGGTGGA+TGG - Chr4:92719824-92719843 None:intergenic 50.0%
TTTCGGAGAAGTGGAGGAAG+TGG - Chr4:92721594-92721613 None:intergenic 50.0%
! TGCAGAAGGTGCGTTTGTTC+TGG + Chr4:92724184-92724203 MsG0480024030.01.T01:CDS 50.0%
! TTTCCCCCCTTTTACGACGT+AGG - Chr4:92721042-92721061 None:intergenic 50.0%
!! CACCAAGCCCAAAGAGTGTT+TGG + Chr4:92719637-92719656 MsG0480024030.01.T01:intron 50.0%
!! CGTGATTTGGTGTTGTCGAG+AGG - Chr4:92724070-92724089 None:intergenic 50.0%
!! GATTTGGTGTTGTCGAGAGG+TGG - Chr4:92724067-92724086 None:intergenic 50.0%
!! GTGGAGGAAGTGGACTATGA+TGG - Chr4:92721584-92721603 None:intergenic 50.0%
!! TAGTCAAGTTGGCCTGCAAG+TGG - Chr4:92723849-92723868 None:intergenic 50.0%
!! TTATTTTGCGTGGGCGTTGC+AGG - Chr4:92719350-92719369 None:intergenic 50.0%
AATGAGCGCGCGAATCAAGG+GGG - Chr4:92723646-92723665 None:intergenic 55.0%
AGGTTGGGATGGTCCGTAGA+TGG - Chr4:92720011-92720030 None:intergenic 55.0%
CCAAATGAGCGCGCGAATCA+AGG - Chr4:92723649-92723668 None:intergenic 55.0%
CGGAGAGTTCCCTCTAACCA+AGG + Chr4:92720094-92720113 MsG0480024030.01.T01:intron 55.0%
CTATACCCTCCACCACTCCA+AGG - Chr4:92722280-92722299 None:intergenic 55.0%
GAAAGTTAGGCGCGGGCAAT+TGG - Chr4:92720180-92720199 None:intergenic 55.0%
GAGGACGCCCAAACACTCTT+TGG - Chr4:92719648-92719667 None:intergenic 55.0%
GAGGGGCTCGAAGCAAATGA+AGG - Chr4:92719873-92719892 None:intergenic 55.0%
GCCCAAACACTCTTTGGGCT+TGG - Chr4:92719642-92719661 None:intergenic 55.0%
GCCCAAAGGAGCAAGCAGTA+AGG + Chr4:92721949-92721968 MsG0480024030.01.T01:intron 55.0%
GGCTGCACTCTGCTTTGCAA+TGG + Chr4:92724261-92724280 MsG0480024030.01.T01:CDS 55.0%
GTGTTCGGTTGGCGGAATGA+CGG - Chr4:92720223-92720242 None:intergenic 55.0%
TCATAGGAACGACCCTGCGA+AGG - Chr4:92720844-92720863 None:intergenic 55.0%
TCATCTCGTCGTCCACTTGC+AGG + Chr4:92723834-92723853 MsG0480024030.01.T01:intron 55.0%
TTAGGCGCGGGCAATTGGTT+TGG - Chr4:92720175-92720194 None:intergenic 55.0%
TTCATGGAGGGGTAGTGAGG+AGG - Chr4:92720732-92720751 None:intergenic 55.0%
TTCTTGCACTCCCCAAGGTC+CGG + Chr4:92721172-92721191 MsG0480024030.01.T01:intron 55.0%
! CCTTGATTCGCGCGCTCATT+TGG + Chr4:92723646-92723665 MsG0480024030.01.T01:intron 55.0%
! GACGAAGGGGTACAGGAGAT+CGG + Chr4:92723207-92723226 MsG0480024030.01.T01:intron 55.0%
! TGTGGTTGACGAAGGGGTAC+AGG + Chr4:92723200-92723219 MsG0480024030.01.T01:intron 55.0%
!! GGATGTCGGTGTAGTGGATG+AGG - Chr4:92719990-92720009 None:intergenic 55.0%
!! TTGGTGTTGTCGAGAGGTGG+AGG - Chr4:92724064-92724083 None:intergenic 55.0%
AATCACGTGGCAGTCTCCCG+TGG + Chr4:92724083-92724102 MsG0480024030.01.T01:intron 60.0%
AGAGACCCTTGGAGTGGTGG+AGG + Chr4:92722271-92722290 MsG0480024030.01.T01:intron 60.0%
AGCGCTTCTTGCACTCCCCA+AGG + Chr4:92721167-92721186 MsG0480024030.01.T01:intron 60.0%
ATGAGCGCGCGAATCAAGGG+GGG - Chr4:92723645-92723664 None:intergenic 60.0%
CGGGAGACTGCCACGTGATT+TGG - Chr4:92724083-92724102 None:intergenic 60.0%
GAGACTTCGAAGGAGCAGGC+CGG - Chr4:92721194-92721213 None:intergenic 60.0%
GGGCGTCCTCACCTTACAAG+CGG + Chr4:92719658-92719677 MsG0480024030.01.T01:intron 60.0%
TCTTGGAGGATGGCAGTGGC+AGG + Chr4:92718540-92718559 MsG0480024030.01.T01:CDS 60.0%
! GAGACCCTTGGAGTGGTGGA+GGG + Chr4:92722272-92722291 MsG0480024030.01.T01:intron 60.0%
!! GTTGTGGTGGTGGTAGGCGA+AGG + Chr4:92723256-92723275 MsG0480024030.01.T01:intron 60.0%
AAGGAGCAGGCCGGACCTTG+GGG - Chr4:92721185-92721204 None:intergenic 65.0%
CGAGAGGTGGAGGCCGTTGT+TGG - Chr4:92724054-92724073 None:intergenic 65.0%
GAAGGAGCAGGCCGGACCTT+GGG - Chr4:92721186-92721205 None:intergenic 65.0%
CGAAGGAGCAGGCCGGACCT+TGG - Chr4:92721187-92721206 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 92718373 92724334 92718373 ID=MsG0480024030.01;Name=MsG0480024030.01
Chr4 mRNA 92718373 92724334 92718373 ID=MsG0480024030.01.T01;Parent=MsG0480024030.01;Name=MsG0480024030.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|0.66|0.75|4|0|175
Chr4 exon 92718373 92718588 92718373 ID=MsG0480024030.01.T01:exon:10743;Parent=MsG0480024030.01.T01
Chr4 exon 92722438 92722486 92722438 ID=MsG0480024030.01.T01:exon:10742;Parent=MsG0480024030.01.T01
Chr4 exon 92722580 92722669 92722580 ID=MsG0480024030.01.T01:exon:10741;Parent=MsG0480024030.01.T01
Chr4 exon 92724162 92724334 92724162 ID=MsG0480024030.01.T01:exon:10740;Parent=MsG0480024030.01.T01
Chr4 CDS 92718373 92718588 92718373 ID=MsG0480024030.01.T01:cds;Parent=MsG0480024030.01.T01
Chr4 CDS 92722438 92722486 92722438 ID=MsG0480024030.01.T01:cds;Parent=MsG0480024030.01.T01
Chr4 CDS 92722580 92722669 92722580 ID=MsG0480024030.01.T01:cds;Parent=MsG0480024030.01.T01
Chr4 CDS 92724162 92724334 92724162 ID=MsG0480024030.01.T01:cds;Parent=MsG0480024030.01.T01
Gene Sequence

>MsG0480024030.01.T01

ATGACTTTGAATTTCGGGGAATTCATTATTCAGATGTGTGAGGCTATTGACAGCTCAGTGACGGGAAAGAATACATTAGAGAAGTTGTATGATGCTGCAAGTATATACTACAACTATAGTGGTACCTCTAAATGTTTCGATTTAAATGATCATTCTGATCCTCATGATCTTGGAGGATGGCAGTGGCAGGTACTCTATTCTACTCATCCCCCAATTAGTGTTGAAGAAATATCAAAAACTATAATTGCTATAGTTGCTAAACAAGGAGCTCATCATGTGGACCTAAGGTACTCAACTAAGGAAGATCCAAAATGGCTTAAAGATGTGAGGATACAAGAAGTAAAGATTATTGAAAGTATTGGTATTTGTGTTCGCGATGCAGAAGGTGCGTTTGTTCTGGATAAGACTATGACATACCCTTGTACGGTTTCGGTGGATGTGGGTGAAGCTTTAGGGCTGCACTCTGCTTTGCAATGGTTGAGTGATATGCAGTTGACAATGTGGATTTTGAAACAGACTCTAAGTTGA

Protein sequence

>MsG0480024030.01.T01

MTLNFGEFIIQMCEAIDSSVTGKNTLEKLYDAASIYYNYSGTSKCFDLNDHSDPHDLGGWQWQVLYSTHPPISVEEISKTIIAIVAKQGAHHVDLRYSTKEDPKWLKDVRIQEVKIIESIGICVRDAEGAFVLDKTMTYPCTVSVDVGEALGLHSALQWLSDMQLTMWILKQTLS*