AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180001356.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001356.01.T01 MTR_1g035700 96.142 337 13 0 1 337 1 337 0.0 679
MsG0180001356.01.T01 MTR_1g035700 95.789 285 12 0 1 285 1 285 0.0 572
MsG0180001356.01.T01 MTR_1g035700 93.493 292 12 1 1 285 1 292 0.0 565
MsG0180001356.01.T01 MTR_4g074120 62.718 287 101 4 1 284 1 284 9.24e-120 347
MsG0180001356.01.T01 MTR_4g074120 60.938 256 94 4 1 253 1 253 1.37e-102 302
MsG0180001356.01.T01 MTR_2g099155 46.701 197 97 4 89 280 39 232 4.81e-50 167
MsG0180001356.01.T01 MTR_2g099155 44.928 207 96 5 89 280 39 242 2.15e-47 160
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180001356.01.T01 AT1G10820 50.196 255 118 5 37 291 1 246 5.02e-68 214
MsG0180001356.01.T01 AT1G60670 50.192 261 105 8 37 291 1 242 7.06e-68 213
MsG0180001356.01.T01 AT1G60670 50.588 255 101 8 37 285 1 236 1.08e-67 213
MsG0180001356.01.T01 AT1G60670 48.837 258 108 6 37 291 1 237 2.87e-66 209
MsG0180001356.01.T01 AT1G10820 56.373 204 85 3 88 291 21 220 2.75e-63 201
MsG0180001356.01.T01 AT3G07565 41.150 226 113 3 58 280 41 249 3.74e-53 176
MsG0180001356.01.T01 AT1G60670 48.430 223 90 8 37 253 1 204 6.78e-52 171
MsG0180001356.01.T01 AT3G07565 40.969 227 113 4 58 280 41 250 2.33e-51 171
MsG0180001356.01.T01 AT3G07565 39.407 236 113 5 58 280 41 259 1.94e-48 164
MsG0180001356.01.T01 AT1G60670 48.515 202 79 8 37 232 1 183 7.25e-44 150
MsG0180001356.01.T01 AT1G68160 38.462 286 153 6 1 285 3 266 1.30e-38 138
MsG0180001356.01.T01 AT3G07565 37.838 148 73 2 58 202 41 172 3.03e-27 106
MsG0180001356.01.T01 AT2G43470 29.832 238 116 11 46 275 1 195 3.13e-13 68.2

Find 106 sgRNAs with CRISPR-Local

Find 501 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTCCAATGGGAAATTATTT+TGG 0.109896 1:+19846657 MsG0180001356.01.T01:CDS
CACCTTGAAAGTAGATAAAT+TGG 0.239951 1:-19851042 None:intergenic
GGGTTGAATCATGATACTTC+TGG 0.256622 1:+19846678 MsG0180001356.01.T01:CDS
GAAGTGAAGTTATAGTTTCT+TGG 0.258554 1:+19846442 MsG0180001356.01.T01:five_prime_UTR
CTTCTTGTTGATTCCGTCCC+TGG 0.274023 1:+19846786 MsG0180001356.01.T01:CDS
TGTTGATGAACAGTATAAAT+TGG 0.341813 1:+19846845 MsG0180001356.01.T01:CDS
ATATGAATTCATCTTTGAAT+TGG 0.346328 1:+19846583 MsG0180001356.01.T01:CDS
GGATTTGAGGTTTAACCAAT+AGG 0.348729 1:-19845889 None:intergenic
ATGATGTATTCGGGGAATTC+AGG 0.349298 1:+19846705 MsG0180001356.01.T01:CDS
TTCCAATTTATCTACTTTCA+AGG 0.352868 1:+19851040 MsG0180001356.01.T01:CDS
TTCTGGGATGATGATGTATT+CGG 0.353610 1:+19846695 MsG0180001356.01.T01:CDS
TTGTGTGTGGGAAGAATAAT+TGG 0.355860 1:-19846069 None:intergenic
CACGAATACGTGGCCACACT+TGG 0.381306 1:-19850230 None:intergenic
ACTCCGGAATAGTGTGATAT+TGG 0.389755 1:-19853592 None:intergenic
TGATCAATTTCTCTCTCTCT+AGG 0.398084 1:+19845923 MsG0180001356.01.T01:five_prime_UTR
CTGTTCGTGATGTTGCTTTG+AGG 0.405905 1:+19849052 MsG0180001356.01.T01:CDS
CTTTGAGTAGGCAATCTTGA+TGG 0.411810 1:-19853486 None:intergenic
TTTCCCATTGGAACCATCTC+AGG 0.418479 1:-19846648 None:intergenic
TTCTCTTCAAGGAATTTGAA+TGG 0.419001 1:+19846384 MsG0180001356.01.T01:five_prime_UTR
GATTTGAGGTTTAACCAATA+GGG 0.419814 1:-19845888 None:intergenic
TGATCCCGTGAAGCGACTCT+TGG 0.424126 1:+19850986 MsG0180001356.01.T01:CDS
AGTCAACCGGGGATTGCGTC+TGG 0.427021 1:+19846756 MsG0180001356.01.T01:CDS
GGAATTCAGGCGTTGTTAGT+AGG 0.427819 1:+19846718 MsG0180001356.01.T01:CDS
TGGCAGTGCCACTACCCATT+TGG 0.434605 1:-19846028 None:intergenic
GGTGTGGAAGTCAATTGTTT+TGG 0.435394 1:+19853538 MsG0180001356.01.T01:CDS
CAGAGAGAGATATGGATTTG+AGG 0.438325 1:-19845902 None:intergenic
TCTGGGATGATGATGTATTC+GGG 0.440187 1:+19846696 MsG0180001356.01.T01:CDS
GTTATAGTTTCTTGGCAAGT+TGG 0.441203 1:+19846450 MsG0180001356.01.T01:five_prime_UTR
TTCGTCGGTTATAAGTCAAC+CGG 0.446944 1:+19846743 MsG0180001356.01.T01:CDS
GGTTGAATCATGATACTTCT+GGG 0.449509 1:+19846679 MsG0180001356.01.T01:CDS
TAACCAATATCACACTATTC+CGG 0.450453 1:+19853589 MsG0180001356.01.T01:CDS
ACACAGGAAGTGGAAGCATT+TGG 0.455633 1:-19852749 None:intergenic
CATGCAATATCATTTGAATC+TGG 0.456790 1:+19846606 MsG0180001356.01.T01:CDS
TTTGGTGCTGCATGGGATTG+AGG 0.458693 1:+19853556 MsG0180001356.01.T01:CDS
TGTTAAAGAAGGTCAACAAT+AGG 0.460190 1:+19849477 MsG0180001356.01.T01:CDS
ATTGAAGCATGATGCAGGTT+TGG 0.461747 1:+19846809 MsG0180001356.01.T01:CDS
AAAAGTATCAAATGCCAAAT+GGG 0.463344 1:+19846014 MsG0180001356.01.T01:five_prime_UTR
CAACGGATACCATATGATAA+TGG 0.463701 1:+19850278 MsG0180001356.01.T01:CDS
TGTTAGTAGCTTACCTGAGA+TGG 0.466063 1:+19846635 MsG0180001356.01.T01:CDS
CCTGCATCATGCTTCAATCC+AGG 0.467679 1:-19846804 None:intergenic
TGAATGTTTGTGGTATATAG+TGG 0.471836 1:+19846479 MsG0180001356.01.T01:five_prime_UTR
AAATTGATCAGAGAGAGATA+TGG 0.475643 1:-19845910 None:intergenic
GCCACACTTGGGGTTAGAAC+TGG 0.480931 1:-19850218 None:intergenic
GTGATGTTGCTTTGAGGTGT+AGG 0.481867 1:+19849058 MsG0180001356.01.T01:CDS
TTCGTGTGTATCACAACCTA+TGG 0.484014 1:+19850247 MsG0180001356.01.T01:CDS
TTATACTGACCATTATCATA+TGG 0.485193 1:-19850287 None:intergenic
TGCTCCAAGAGTCGCTTCAC+GGG 0.489073 1:-19850990 None:intergenic
AACCCAAAATAATTTCCCAT+TGG 0.495621 1:-19846660 None:intergenic
ACTGGCTGCATACACTGCTT+TGG 0.504226 1:-19850200 None:intergenic
TACAAATAGTTGAAAAGTGA+TGG 0.505840 1:+19846527 MsG0180001356.01.T01:exon
CCTGGATTGAAGCATGATGC+AGG 0.507354 1:+19846804 MsG0180001356.01.T01:CDS
TTGCTCCAAGAGTCGCTTCA+CGG 0.512660 1:-19850991 None:intergenic
ACGAATACGTGGCCACACTT+GGG 0.513683 1:-19850229 None:intergenic
AAGTTAAGAAATTTGTGTGT+GGG 0.520990 1:-19846081 None:intergenic
TGCTTTGGTGATGAAACCAT+TGG 0.521864 1:-19850185 None:intergenic
TCGTCAATCGACACAGGAAG+TGG 0.524585 1:-19852759 None:intergenic
AGAAGAGCACATGTTAAAGA+AGG 0.529829 1:+19849466 MsG0180001356.01.T01:CDS
CAAAGATGAATTAGAAACTC+CGG 0.534889 1:-19853608 None:intergenic
TTGGTGAATTTGAATGTTTG+TGG 0.536198 1:+19846469 MsG0180001356.01.T01:five_prime_UTR
GTGGACAAGTGTAGAGAGGT+TGG 0.539479 1:+19853508 MsG0180001356.01.T01:CDS
GAACAGCCAGACGCAATCCC+CGG 0.541451 1:-19846762 None:intergenic
CTTACCTGAGATGGTTCCAA+TGG 0.547129 1:+19846644 MsG0180001356.01.T01:CDS
ATCCGTTGACTTCTGTCCAT+AGG 0.549951 1:-19850263 None:intergenic
ATTCACATACTCATCAAGAA+TGG 0.552530 1:-19852585 None:intergenic
TCAAGATTGCCTACTCAAAG+TGG 0.557165 1:+19853489 MsG0180001356.01.T01:CDS
ATCAAATGCCAAATGGGTAG+TGG 0.558971 1:+19846020 MsG0180001356.01.T01:five_prime_UTR
AACAGTATAAATTGGAGGAG+GGG 0.559930 1:+19846853 MsG0180001356.01.T01:CDS
TCTTCTTCAGGATAAGCCAA+TGG 0.562507 1:+19850169 MsG0180001356.01.T01:intron
GATCAATTTCTCTCTCTCTA+GGG 0.562978 1:+19845924 MsG0180001356.01.T01:five_prime_UTR
TATGTAATATACTACTTGCA+AGG 0.565240 1:-19852785 None:intergenic
CGAATACGTGGCCACACTTG+GGG 0.565432 1:-19850228 None:intergenic
TTAATTGAGCTTAAGCTCGT+AGG 0.567472 1:+19845794 None:intergenic
TTGACGTACCTCATGATACT+CGG 0.568807 1:-19849003 None:intergenic
TGAACAGTATAAATTGGAGG+AGG 0.569871 1:+19846851 MsG0180001356.01.T01:CDS
AGCATTTGGCTCATTATACC+AGG 0.571884 1:-19852735 None:intergenic
TTACCTGAGATGGTTCCAAT+GGG 0.573001 1:+19846645 MsG0180001356.01.T01:CDS
CGTTGTTAGTAGGAATTCGT+CGG 0.577256 1:+19846728 MsG0180001356.01.T01:CDS
AAAGTTAAGAAATTTGTGTG+TGG 0.579945 1:-19846082 None:intergenic
CTGCATCATGCTTCAATCCA+GGG 0.583717 1:-19846803 None:intergenic
TGCAGCATGAGAGCGATGCC+TGG 0.593370 1:+19852717 MsG0180001356.01.T01:intron
TATATTACATAATAAAACTC+AGG 0.597323 1:+19852797 MsG0180001356.01.T01:CDS
TCGTCGGTTATAAGTCAACC+GGG 0.602256 1:+19846744 MsG0180001356.01.T01:CDS
TGATGAACAGTATAAATTGG+AGG 0.605084 1:+19846848 MsG0180001356.01.T01:CDS
GAACAGTATAAATTGGAGGA+GGG 0.605834 1:+19846852 MsG0180001356.01.T01:CDS
ATGCAGGTTTGGCTGCTGAG+TGG 0.614045 1:+19846820 MsG0180001356.01.T01:CDS
ATGTTGCTTTGAGGTGTAGG+TGG 0.619616 1:+19849061 MsG0180001356.01.T01:CDS
GAAGAGAAAGAAAACCCAGA+TGG 0.619633 1:-19846369 None:intergenic
TACACTTGTCCACTTTGAGT+AGG 0.627153 1:-19853498 None:intergenic
AAAGAAGGTCAACAATAGGA+AGG 0.632079 1:+19849481 MsG0180001356.01.T01:CDS
AGGTCCTCGTCAATCGACAC+AGG 0.634291 1:-19852765 None:intergenic
GCCAGTTCTAACCCCAAGTG+TGG 0.637597 1:+19850217 MsG0180001356.01.T01:CDS
ACTTCCTGTGTCGATTGACG+AGG 0.637696 1:+19852761 MsG0180001356.01.T01:CDS
ATCATGCTTCAATCCAGGGA+CGG 0.639101 1:-19846799 None:intergenic
CAAAGTGGACAAGTGTAGAG+AGG 0.649492 1:+19853504 MsG0180001356.01.T01:CDS
TGTTGTGCCGTGTCTGACTG+AGG 0.650409 1:-19852556 None:intergenic
GCAATATCATTTGAATCTGG+TGG 0.655444 1:+19846609 MsG0180001356.01.T01:CDS
TTGTGATACACACGAATACG+TGG 0.661179 1:-19850240 None:intergenic
TGTGTGGGAAGAATAATTGG+TGG 0.664229 1:-19846066 None:intergenic
CTGGGATGATGATGTATTCG+GGG 0.667463 1:+19846697 MsG0180001356.01.T01:CDS
TCGACCTCCTCAGTCAGACA+CGG 0.677196 1:+19852549 MsG0180001356.01.T01:CDS
GGTGGTTATTGTGAGTGCAG+TGG 0.686256 1:-19846048 None:intergenic
CTGATGAGCCGAGTATCATG+AGG 0.688164 1:+19848995 MsG0180001356.01.T01:CDS
GTGTGATATTGGTTATGATG+TGG 0.692127 1:-19853581 None:intergenic
AACCTATGGACAGAAGTCAA+CGG 0.697598 1:+19850261 MsG0180001356.01.T01:CDS
CGTCGGTTATAAGTCAACCG+GGG 0.732238 1:+19846745 MsG0180001356.01.T01:CDS
TGTGCCGTGTCTGACTGAGG+AGG 0.760314 1:-19852553 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTAATAAAATAATATT+AGG - Chr1:19849129-19849148 None:intergenic 0.0%
!! TAAAATATTCAATTAATTAG+AGG - Chr1:19852920-19852939 None:intergenic 10.0%
!!! AATCCAATATTTAATTTTAT+GGG + Chr1:19851317-19851336 MsG0180001356.01.T01:intron 10.0%
!!! TAATCCAATATTTAATTTTA+TGG + Chr1:19851316-19851335 MsG0180001356.01.T01:intron 10.0%
!!! TTCAATAATATTTATCTTTT+TGG + Chr1:19847659-19847678 MsG0180001356.01.T01:intron 10.0%
!!! TTTATACCTATATTTTATAA+AGG - Chr1:19851264-19851283 None:intergenic 10.0%
!!! TTTTTTTTTTTTTACTTTTG+TGG - Chr1:19845993-19846012 None:intergenic 10.0%
!! AAAAAAAAAATAAAGATAGG+AGG + Chr1:19847691-19847710 MsG0180001356.01.T01:intron 15.0%
!! AAAAAAAAGATCATAAATAC+CGG + Chr1:19851219-19851238 MsG0180001356.01.T01:intron 15.0%
!! AAAGAATAGAAAATAAAAGA+AGG - Chr1:19848522-19848541 None:intergenic 15.0%
!! AAATGTATTTATATATATGG+TGG - Chr1:19847280-19847299 None:intergenic 15.0%
!! AAGAATAGAAAATAAAAGAA+GGG - Chr1:19848521-19848540 None:intergenic 15.0%
!! AATGTATTTATATATATGGT+GGG - Chr1:19847279-19847298 None:intergenic 15.0%
!! ACTATCACAAAAAAAAAAAA+TGG - Chr1:19846330-19846349 None:intergenic 15.0%
!! ATATTGCACAAAAAAATAAA+TGG - Chr1:19852894-19852913 None:intergenic 15.0%
!! ATGAATAATCATACTTTATT+AGG - Chr1:19850689-19850708 None:intergenic 15.0%
!! GATAAAGTATAATATAAGAT+AGG - Chr1:19853345-19853364 None:intergenic 15.0%
!! TAATGCATTAAGTATAAATT+TGG + Chr1:19849358-19849377 MsG0180001356.01.T01:intron 15.0%
!! TATATTACATAATAAAACTC+AGG + Chr1:19852797-19852816 MsG0180001356.01.T01:CDS 15.0%
!! TTTAAGCCTTTATAAAATAT+AGG + Chr1:19851255-19851274 MsG0180001356.01.T01:intron 15.0%
!! TTTAGGTAAAAATTTGATAT+GGG + Chr1:19846142-19846161 MsG0180001356.01.T01:intron 15.0%
!!! TGAATTCATCAATAATTTTT+AGG + Chr1:19852341-19852360 MsG0180001356.01.T01:intron 15.0%
!! AATTAATTGATGTGTTCTAT+AGG + Chr1:19851371-19851390 MsG0180001356.01.T01:intron 20.0%
!! ACAAAGACTAATAAAAATGA+AGG - Chr1:19851078-19851097 None:intergenic 20.0%
!! ACTTTATAGCTATTGTTATA+CGG - Chr1:19849898-19849917 None:intergenic 20.0%
!! ATAACTCAATCCTAAATAAT+CGG + Chr1:19847450-19847469 MsG0180001356.01.T01:intron 20.0%
!! ATAGAGAAAAATCAACAAAA+AGG - Chr1:19845868-19845887 None:intergenic 20.0%
!! ATATCAATTTGATCATGATA+TGG - Chr1:19849220-19849239 None:intergenic 20.0%
!! ATATGAATTCATCTTTGAAT+TGG + Chr1:19846583-19846602 MsG0180001356.01.T01:CDS 20.0%
!! ATCATAAAACATCAATCAAA+TGG + Chr1:19849761-19849780 MsG0180001356.01.T01:intron 20.0%
!! CAAAAAAAGAAAGAAAACAA+GGG - Chr1:19848953-19848972 None:intergenic 20.0%
!! CTTAATCAATAAACTTCAAA+AGG - Chr1:19852693-19852712 None:intergenic 20.0%
!! CTTTAGGTAAAAATTTGATA+TGG + Chr1:19846141-19846160 MsG0180001356.01.T01:intron 20.0%
!! TAAAATTTGGAAGTTATTCT+GGG + Chr1:19848645-19848664 MsG0180001356.01.T01:intron 20.0%
!! TAAGAAAGTAATATCGTATT+TGG - Chr1:19848475-19848494 None:intergenic 20.0%
!! TCTTGTAATTCTTAATTTCA+TGG + Chr1:19853290-19853309 MsG0180001356.01.T01:intron 20.0%
!! TGTCCCATAAAATTAAATAT+TGG - Chr1:19851323-19851342 None:intergenic 20.0%
!! TTAAAATTTGGAAGTTATTC+TGG + Chr1:19848644-19848663 MsG0180001356.01.T01:intron 20.0%
!! TTATACTTAATGCATTATGT+TGG - Chr1:19849355-19849374 None:intergenic 20.0%
!! TTGTTACCAAAAATTCAAAA+GGG + Chr1:19846103-19846122 MsG0180001356.01.T01:five_prime_UTR 20.0%
!! TTTGTTACCAAAAATTCAAA+AGG + Chr1:19846102-19846121 MsG0180001356.01.T01:five_prime_UTR 20.0%
!!! AAAAAAGCTCTAAATTACTT+AGG - Chr1:19853260-19853279 None:intergenic 20.0%
!!! AAAAAGCTCTAAATTACTTA+GGG - Chr1:19853259-19853278 None:intergenic 20.0%
!!! CAATAAGTTGAATACATTAA+GGG + Chr1:19852964-19852983 MsG0180001356.01.T01:intron 20.0%
!!! CTCATCATACTTTTTTTTTT+TGG + Chr1:19848221-19848240 MsG0180001356.01.T01:intron 20.0%
!!! GAACAGTAAAAAATAGTTTT+GGG - Chr1:19850599-19850618 None:intergenic 20.0%
!!! GAATAACTTCCAAATTTTAA+AGG - Chr1:19848644-19848663 None:intergenic 20.0%
!!! TAGTATTTTTCACTTTTGAA+TGG - Chr1:19849292-19849311 None:intergenic 20.0%
!!! TATTACAGAAAATGCTTTTT+AGG + Chr1:19849952-19849971 MsG0180001356.01.T01:intron 20.0%
!!! TATTTTCATCCAAGATAAAA+AGG + Chr1:19849164-19849183 MsG0180001356.01.T01:intron 20.0%
!!! TCAAATACTGATTTTCATTA+TGG + Chr1:19846558-19846577 MsG0180001356.01.T01:CDS 20.0%
!!! TCATCAATAATTTTTAGGTA+TGG + Chr1:19852346-19852365 MsG0180001356.01.T01:intron 20.0%
!!! TTAATAAGTTCTTGTCTTTT+TGG + Chr1:19852472-19852491 MsG0180001356.01.T01:intron 20.0%
!!! TTCTAAATTTTTTCTTCTTC+AGG + Chr1:19850157-19850176 MsG0180001356.01.T01:intron 20.0%
! AAAATTTGGAAGTTATTCTG+GGG + Chr1:19848646-19848665 MsG0180001356.01.T01:intron 25.0%
! AAAGTTAAGAAATTTGTGTG+TGG - Chr1:19846085-19846104 None:intergenic 25.0%
! AAATTCCTGACAGTAAAAAT+AGG - Chr1:19850965-19850984 None:intergenic 25.0%
! AAGACTAATAAAAATGAAGG+TGG - Chr1:19851075-19851094 None:intergenic 25.0%
! AAGCTGAAAAAATACAAAAC+AGG - Chr1:19848078-19848097 None:intergenic 25.0%
! AAGTTAAGAAATTTGTGTGT+GGG - Chr1:19846084-19846103 None:intergenic 25.0%
! AATACAAAGTTTGCAAAGAA+AGG - Chr1:19852424-19852443 None:intergenic 25.0%
! AATTCCTGACAGTAAAAATA+GGG - Chr1:19850964-19850983 None:intergenic 25.0%
! AGTAAAAATGTCATGAAAGA+TGG + Chr1:19853002-19853021 MsG0180001356.01.T01:intron 25.0%
! AGTCAAATTCACAATTATTG+AGG - Chr1:19850750-19850769 None:intergenic 25.0%
! ATAAAACATCAATCAAATGG+TGG + Chr1:19849764-19849783 MsG0180001356.01.T01:intron 25.0%
! ATAAGATAGGAAAATGTGAA+AGG - Chr1:19853332-19853351 None:intergenic 25.0%
! ATATACTTCAGTTCACTAAT+AGG - Chr1:19853410-19853429 None:intergenic 25.0%
! ATCTTAAATCACACTTCATT+CGG - Chr1:19852208-19852227 None:intergenic 25.0%
! CAAACAATGTTTAAGTAAGA+TGG + Chr1:19847628-19847647 MsG0180001356.01.T01:intron 25.0%
! GCAAAAAAAGAAAGAAAACA+AGG - Chr1:19848954-19848973 None:intergenic 25.0%
! GTTTGTAAGATCATAAATAC+CGG + Chr1:19851096-19851115 MsG0180001356.01.T01:intron 25.0%
! TACAAATAGTTGAAAAGTGA+TGG + Chr1:19846527-19846546 MsG0180001356.01.T01:exon 25.0%
! TACATACTGAAACTGTATTT+AGG - Chr1:19847580-19847599 None:intergenic 25.0%
! TACGAAAAATAATGACTTCA+TGG - Chr1:19847911-19847930 None:intergenic 25.0%
! TAGAATTGCTTGAATCAAAT+TGG + Chr1:19848870-19848889 MsG0180001356.01.T01:intron 25.0%
! TATGTAATATACTACTTGCA+AGG - Chr1:19852788-19852807 None:intergenic 25.0%
! TCAAGTAAGTAATTTATCCT+TGG + Chr1:19846880-19846899 MsG0180001356.01.T01:intron 25.0%
! TTAATTAAGCTCATTCAAAC+AGG + Chr1:19853233-19853252 MsG0180001356.01.T01:intron 25.0%
! TTATACTGACCATTATCATA+TGG - Chr1:19850290-19850309 None:intergenic 25.0%
! TTCCAATTTATCTACTTTCA+AGG + Chr1:19851040-19851059 MsG0180001356.01.T01:CDS 25.0%
! TTGTCAATAAAATGCAATAG+CGG - Chr1:19848810-19848829 None:intergenic 25.0%
!! AATATTGACAACACTGTTTT+GGG - Chr1:19850442-19850461 None:intergenic 25.0%
!! CATTCTTATCCTTTTTATCT+TGG - Chr1:19849176-19849195 None:intergenic 25.0%
!! CGAACAGTAAAAAATAGTTT+TGG - Chr1:19850600-19850619 None:intergenic 25.0%
!! GCAATAAGTTGAATACATTA+AGG + Chr1:19852963-19852982 MsG0180001356.01.T01:intron 25.0%
!! GTTCTCTTTTCTTTATCTTT+AGG + Chr1:19846125-19846144 MsG0180001356.01.T01:five_prime_UTR 25.0%
!! TGTTGATGAACAGTATAAAT+TGG + Chr1:19846845-19846864 MsG0180001356.01.T01:CDS 25.0%
!! TTCCAATGGGAAATTATTTT+GGG + Chr1:19846658-19846677 MsG0180001356.01.T01:CDS 25.0%
!! TTTATTAGGCTTTTATGACT+GGG - Chr1:19850675-19850694 None:intergenic 25.0%
!! TTTCTTTTATAAACAGTTGC+AGG + Chr1:19852520-19852539 MsG0180001356.01.T01:intron 25.0%
!!! AAAAAGTATCAAATGCCAAA+TGG + Chr1:19846013-19846032 MsG0180001356.01.T01:five_prime_UTR 25.0%
!!! AAAAGTATCAAATGCCAAAT+GGG + Chr1:19846014-19846033 MsG0180001356.01.T01:five_prime_UTR 25.0%
!!! AAAATTACCGATTCATTTCT+GGG + Chr1:19850013-19850032 MsG0180001356.01.T01:intron 25.0%
!!! AACTTATTGCTATTTGTATG+TGG - Chr1:19852953-19852972 None:intergenic 25.0%
!!! AAGCCTTAACCTTTAAAATT+TGG + Chr1:19848632-19848651 MsG0180001356.01.T01:intron 25.0%
!!! CTTCCAAATTTTAAAGGTTA+AGG - Chr1:19848638-19848657 None:intergenic 25.0%
!!! GCTTAGCTTGTTTATATATT+CGG + Chr1:19851465-19851484 MsG0180001356.01.T01:intron 25.0%
!!! TTCTGGTTTTAGCTATTTTA+AGG + Chr1:19847978-19847997 MsG0180001356.01.T01:intron 25.0%
!!! TTTGAATGGTTTTGATGAAT+TGG + Chr1:19846398-19846417 MsG0180001356.01.T01:five_prime_UTR 25.0%
AAAACTGTGTTTATAAGTGG+TGG - Chr1:19847495-19847514 None:intergenic 30.0%
AAACTGTGTTTATAAGTGGT+GGG - Chr1:19847494-19847513 None:intergenic 30.0%
AAAGGATTTACACAATTCAG+AGG - Chr1:19852406-19852425 None:intergenic 30.0%
AAATTGATCAGAGAGAGATA+TGG - Chr1:19845913-19845932 None:intergenic 30.0%
AACAGGTACAATAAAAACAG+AGG - Chr1:19848061-19848080 None:intergenic 30.0%
AACCCAAAATAATTTCCCAT+TGG - Chr1:19846663-19846682 None:intergenic 30.0%
AAGTTGAATACATTAAGGGA+AGG + Chr1:19852968-19852987 MsG0180001356.01.T01:intron 30.0%
AATGTCATGAAAGATGGTAA+TGG + Chr1:19853008-19853027 MsG0180001356.01.T01:intron 30.0%
AGAAAGTTAGGGAAAGTAAA+GGG - Chr1:19851654-19851673 None:intergenic 30.0%
AGAAATTTCCTAGCTTGAAT+TGG - Chr1:19853462-19853481 None:intergenic 30.0%
ATGTATTACCAATTCAAGCT+AGG + Chr1:19853451-19853470 MsG0180001356.01.T01:intron 30.0%
ATTCACATACTCATCAAGAA+TGG - Chr1:19852588-19852607 None:intergenic 30.0%
ATTCCTGACAGTAAAAATAG+GGG - Chr1:19850963-19850982 None:intergenic 30.0%
ATTGAAGAGAATGTTACAGA+CGG - Chr1:19848450-19848469 None:intergenic 30.0%
CAAAACAGTGTTGTCAATAT+TGG + Chr1:19850441-19850460 MsG0180001356.01.T01:intron 30.0%
CAAAGATGAATTAGAAACTC+CGG - Chr1:19853611-19853630 None:intergenic 30.0%
CACCTTGAAAGTAGATAAAT+TGG - Chr1:19851045-19851064 None:intergenic 30.0%
CATAATTCATATCTCATAGC+AGG + Chr1:19847878-19847897 MsG0180001356.01.T01:intron 30.0%
CATGCAATATCATTTGAATC+TGG + Chr1:19846606-19846625 MsG0180001356.01.T01:CDS 30.0%
CATGTATTTCATTGTTCCTT+TGG + Chr1:19852847-19852866 MsG0180001356.01.T01:intron 30.0%
CCAAATCGAATTTGTAAACA+TGG + Chr1:19847854-19847873 MsG0180001356.01.T01:intron 30.0%
CCATGTTTACAAATTCGATT+TGG - Chr1:19847857-19847876 None:intergenic 30.0%
CCTAAAACTGTGTTTATAAG+TGG - Chr1:19847498-19847517 None:intergenic 30.0%
CGTCAAACATAGATGTAAAA+TGG - Chr1:19849652-19849671 None:intergenic 30.0%
CTCTACTAATAACAACTACT+AGG + Chr1:19850404-19850423 MsG0180001356.01.T01:intron 30.0%
CTGAAATCACCTTAGAATTT+GGG + Chr1:19847421-19847440 MsG0180001356.01.T01:intron 30.0%
CTTAAAAATCATCAGTTCAC+CGG - Chr1:19851241-19851260 None:intergenic 30.0%
GAAGTGAAGTTATAGTTTCT+TGG + Chr1:19846442-19846461 MsG0180001356.01.T01:five_prime_UTR 30.0%
GATGTACAATTTCAATCACT+TGG + Chr1:19846933-19846952 MsG0180001356.01.T01:intron 30.0%
GATTATTGAGCATCCTATAA+AGG - Chr1:19851974-19851993 None:intergenic 30.0%
GGAAATGAAGTGAATCAAAA+TGG - Chr1:19853101-19853120 None:intergenic 30.0%
TAAAGATAGGAGGAATTGTT+TGG + Chr1:19847701-19847720 MsG0180001356.01.T01:intron 30.0%
TAACCAATATCACACTATTC+CGG + Chr1:19853589-19853608 MsG0180001356.01.T01:CDS 30.0%
TAAGACACACATCAAAAACT+AGG - Chr1:19850902-19850921 None:intergenic 30.0%
TAATTATCAGCAAAAACACC+TGG - Chr1:19851356-19851375 None:intergenic 30.0%
TACAACAACTCTTAGAATCT+GGG + Chr1:19847206-19847225 MsG0180001356.01.T01:intron 30.0%
TACTAATAACAACTACTAGG+TGG + Chr1:19850407-19850426 MsG0180001356.01.T01:intron 30.0%
TAGATCCTGATGACATTAAT+TGG - Chr1:19850116-19850135 None:intergenic 30.0%
TCTAAATCATCGAGAAATCA+AGG + Chr1:19850633-19850652 MsG0180001356.01.T01:intron 30.0%
TGAATGTTTGTGGTATATAG+TGG + Chr1:19846479-19846498 MsG0180001356.01.T01:five_prime_UTR 30.0%
TGATGAACAGTATAAATTGG+AGG + Chr1:19846848-19846867 MsG0180001356.01.T01:CDS 30.0%
TGATTGTATAACTTCACCAA+AGG - Chr1:19852866-19852885 None:intergenic 30.0%
TGTTAAAGAAGGTCAACAAT+AGG + Chr1:19849477-19849496 MsG0180001356.01.T01:CDS 30.0%
TTAAAGTTGAATCTGCTAAG+TGG + Chr1:19850721-19850740 MsG0180001356.01.T01:intron 30.0%
TTACGTTTCAAACCATAAAC+AGG + Chr1:19850067-19850086 MsG0180001356.01.T01:intron 30.0%
TTCCATCTTACTAAGATTCA+TGG + Chr1:19853117-19853136 MsG0180001356.01.T01:intron 30.0%
TTCGTATCTTACGTTCATAA+AGG + Chr1:19847925-19847944 MsG0180001356.01.T01:intron 30.0%
TTCTCTTCAAGGAATTTGAA+TGG + Chr1:19846384-19846403 MsG0180001356.01.T01:five_prime_UTR 30.0%
TTGGTGAATTTGAATGTTTG+TGG + Chr1:19846469-19846488 MsG0180001356.01.T01:five_prime_UTR 30.0%
TTGTGTGTGTGAGTTTATAA+TGG - Chr1:19848268-19848287 None:intergenic 30.0%
! AGAGAACCCTTTTGAATTTT+TGG - Chr1:19846112-19846131 None:intergenic 30.0%
! AGCTTGTTTATATATTCGGT+AGG + Chr1:19851469-19851488 MsG0180001356.01.T01:intron 30.0%
! CAAAGCTTTGTCTTAAATGA+AGG + Chr1:19847543-19847562 MsG0180001356.01.T01:intron 30.0%
! CAATATTGACAACACTGTTT+TGG - Chr1:19850443-19850462 None:intergenic 30.0%
! CCACTTATAAACACAGTTTT+AGG + Chr1:19847495-19847514 MsG0180001356.01.T01:intron 30.0%
! CTTTATTAGGCTTTTATGAC+TGG - Chr1:19850676-19850695 None:intergenic 30.0%
! GACTTGAGCATTACATTTTT+GGG - Chr1:19852101-19852120 None:intergenic 30.0%
! GATTTGAGGTTTAACCAATA+GGG - Chr1:19845891-19845910 None:intergenic 30.0%
! GCATACTTGATCTTTTGAAT+AGG + Chr1:19849597-19849616 MsG0180001356.01.T01:intron 30.0%
! GGACAAACAGACATTTTTAA+AGG - Chr1:19851728-19851747 None:intergenic 30.0%
! GTTCCAATGGGAAATTATTT+TGG + Chr1:19846657-19846676 MsG0180001356.01.T01:CDS 30.0%
! TACTTTATCTCTCGAAGTTT+TGG + Chr1:19853356-19853375 MsG0180001356.01.T01:intron 30.0%
! TCATTTAAGACAAAGCTTTG+AGG - Chr1:19847543-19847562 None:intergenic 30.0%
! TCTGAAATCACCTTAGAATT+TGG + Chr1:19847420-19847439 MsG0180001356.01.T01:intron 30.0%
! TGATTTTTCTCTATCCCTAT+TGG + Chr1:19845874-19845893 MsG0180001356.01.T01:five_prime_UTR 30.0%
! TGGTAGCATAACATTTTATC+TGG - Chr1:19849335-19849354 None:intergenic 30.0%
! TTGTTTCTTGAAGAATAGTC+TGG + Chr1:19849550-19849569 MsG0180001356.01.T01:intron 30.0%
!! AAGGCTCTAGATATTATGTT+AGG - Chr1:19851683-19851702 None:intergenic 30.0%
!! CTTTTTGCTATGAGTATTCT+AGG - Chr1:19848615-19848634 None:intergenic 30.0%
!! GAAAATTACCGATTCATTTC+TGG + Chr1:19850012-19850031 MsG0180001356.01.T01:intron 30.0%
!! TAGAGTACTTTGTCTTTTTC+AGG + Chr1:19847120-19847139 MsG0180001356.01.T01:intron 30.0%
!! TGAATCTGTGATGTTTTTGA+GGG + Chr1:19846273-19846292 MsG0180001356.01.T01:intron 30.0%
!!! CAAATTCGATTTGGTTTTTG+AGG - Chr1:19847848-19847867 None:intergenic 30.0%
!!! TGTATTTTTTCAGCTTCTTG+AGG + Chr1:19848082-19848101 MsG0180001356.01.T01:intron 30.0%
AAAAGAGGTAAGGTAAGGTA+AGG - Chr1:19849267-19849286 None:intergenic 35.0%
AAACTGTGTGACAAAAAGCT+TGG - Chr1:19848901-19848920 None:intergenic 35.0%
AAAGAAGGTCAACAATAGGA+AGG + Chr1:19849481-19849500 MsG0180001356.01.T01:CDS 35.0%
AAAGTTCTGTATCATGTCGA+AGG + Chr1:19851550-19851569 MsG0180001356.01.T01:intron 35.0%
AAATGCTGAAATTGTTAGGC+CGG - Chr1:19848327-19848346 None:intergenic 35.0%
AACAGTATAAATTGGAGGAG+GGG + Chr1:19846853-19846872 MsG0180001356.01.T01:CDS 35.0%
AAGAAACTGTAGATGCAACT+AGG + Chr1:19847752-19847771 MsG0180001356.01.T01:intron 35.0%
AAGATAATGAACAGCGTCAT+AGG - Chr1:19852454-19852473 None:intergenic 35.0%
AATAACAAGAACGACAACCA+AGG - Chr1:19846900-19846919 None:intergenic 35.0%
AATATTGGCAATGCGAATTG+CGG + Chr1:19850456-19850475 MsG0180001356.01.T01:intron 35.0%
ACCTTACAAGCCGATTATTT+AGG - Chr1:19847463-19847482 None:intergenic 35.0%
ACTGTATTTAGGCAACATTG+TGG - Chr1:19847569-19847588 None:intergenic 35.0%
ACTTGTGAGACTATTTGGAA+GGG - Chr1:19853193-19853212 None:intergenic 35.0%
AGTTACGATTATCTTGTCCA+AGG - Chr1:19852262-19852281 None:intergenic 35.0%
AGTTCCATAAACAAAGATGG+AGG - Chr1:19848413-19848432 None:intergenic 35.0%
ATAAAACTCAGGTAAGTTGC+TGG + Chr1:19852808-19852827 MsG0180001356.01.T01:intron 35.0%
ATGCTCACACATGTTGTAAT+TGG + Chr1:19851870-19851889 MsG0180001356.01.T01:intron 35.0%
ATTAGAAGAAGTGAAGCACA+TGG - Chr1:19848117-19848136 None:intergenic 35.0%
CAACGGATACCATATGATAA+TGG + Chr1:19850278-19850297 MsG0180001356.01.T01:CDS 35.0%
CACACATCAAAAACTAGGAA+AGG - Chr1:19850897-19850916 None:intergenic 35.0%
CACTACCATCAAATTTGTCT+AGG + Chr1:19851912-19851931 MsG0180001356.01.T01:intron 35.0%
CATATCTCATAGCAGGTTTA+GGG + Chr1:19847885-19847904 MsG0180001356.01.T01:intron 35.0%
CATATGAAGTGATGAGAGTT+AGG - Chr1:19850858-19850877 None:intergenic 35.0%
CTACAACAACTCTTAGAATC+TGG + Chr1:19847205-19847224 MsG0180001356.01.T01:intron 35.0%
CTAGGAATGTGAAACAATTC+AGG + Chr1:19847770-19847789 MsG0180001356.01.T01:intron 35.0%
CTGAACCAATTAATGTCATC+AGG + Chr1:19850108-19850127 MsG0180001356.01.T01:intron 35.0%
GAACAGTATAAATTGGAGGA+GGG + Chr1:19846852-19846871 MsG0180001356.01.T01:CDS 35.0%
GAGAAAGTTAGGGAAAGTAA+AGG - Chr1:19851655-19851674 None:intergenic 35.0%
GAGTACCTAGACAAATTTGA+TGG - Chr1:19851920-19851939 None:intergenic 35.0%
GATCAATTTCTCTCTCTCTA+GGG + Chr1:19845924-19845943 MsG0180001356.01.T01:five_prime_UTR 35.0%
GATCATTATCACAAGCTTAG+AGG - Chr1:19852498-19852517 None:intergenic 35.0%
GCAATATCATTTGAATCTGG+TGG + Chr1:19846609-19846628 MsG0180001356.01.T01:CDS 35.0%
GGCAAAATGCTGAAATTGTT+AGG - Chr1:19848331-19848350 None:intergenic 35.0%
GGTACATGAAATTAGAAAGC+TGG + Chr1:19849502-19849521 MsG0180001356.01.T01:intron 35.0%
GGTTGAATCATGATACTTCT+GGG + Chr1:19846679-19846698 MsG0180001356.01.T01:CDS 35.0%
GTCCATGAATCTTAGTAAGA+TGG - Chr1:19853122-19853141 None:intergenic 35.0%
GTCTCACATTGAATAAGATG+CGG - Chr1:19847308-19847327 None:intergenic 35.0%
GTTATAGTTTCTTGGCAAGT+TGG + Chr1:19846450-19846469 MsG0180001356.01.T01:five_prime_UTR 35.0%
TAAATCACACTTCATTCGGA+GGG - Chr1:19852204-19852223 None:intergenic 35.0%
TAATCTCTGTTCAGAGAACT+TGG - Chr1:19851595-19851614 None:intergenic 35.0%
TATAAACTCACACACACAAG+TGG + Chr1:19848269-19848288 MsG0180001356.01.T01:intron 35.0%
TATGCTCAACCCAAATTCTA+AGG - Chr1:19847433-19847452 None:intergenic 35.0%
TCATATCTCATAGCAGGTTT+AGG + Chr1:19847884-19847903 MsG0180001356.01.T01:intron 35.0%
TGAACAGTATAAATTGGAGG+AGG + Chr1:19846851-19846870 MsG0180001356.01.T01:CDS 35.0%
TGATCAATTTCTCTCTCTCT+AGG + Chr1:19845923-19845942 MsG0180001356.01.T01:five_prime_UTR 35.0%
TGCAGTTCCATAAACAAAGA+TGG - Chr1:19848416-19848435 None:intergenic 35.0%
TGGTTCAGTGTTATCTAAAG+AGG - Chr1:19850096-19850115 None:intergenic 35.0%
TTAAATCACACTTCATTCGG+AGG - Chr1:19852205-19852224 None:intergenic 35.0%
TTAAGCTTATCCACAAACAC+AGG - Chr1:19853217-19853236 None:intergenic 35.0%
TTAGGACTGAGAGAAAGTTA+GGG - Chr1:19851665-19851684 None:intergenic 35.0%
TTATGACCATACTTGTGACA+TGG - Chr1:19851851-19851870 None:intergenic 35.0%
TTCTTGACTGGACAGAAAAT+CGG - Chr1:19851618-19851637 None:intergenic 35.0%
TTGAATGGAGAAAAGAGGTA+AGG - Chr1:19849277-19849296 None:intergenic 35.0%
TTGTGTGTGGGAAGAATAAT+TGG - Chr1:19846072-19846091 None:intergenic 35.0%
TTGTTAAACCATCTGAACCT+TGG + Chr1:19852242-19852261 MsG0180001356.01.T01:intron 35.0%
TTTCCTATGTGCATACTTCA+AGG - Chr1:19849402-19849421 None:intergenic 35.0%
! AAAGCCTTTTCAAACTGAAC+AGG - Chr1:19853034-19853053 None:intergenic 35.0%
! ACCTTGTTATAAGCTAACTG+AGG - Chr1:19852019-19852038 None:intergenic 35.0%
! AGAAGAGCACATGTTAAAGA+AGG + Chr1:19849466-19849485 MsG0180001356.01.T01:CDS 35.0%
! CACTTTTGAATGGAGAAAAG+AGG - Chr1:19849282-19849301 None:intergenic 35.0%
! CTAGACAAATTTGATGGTAG+TGG - Chr1:19851914-19851933 None:intergenic 35.0%
! CTTTTGTGCTAATTCCATCT+GGG + Chr1:19846355-19846374 MsG0180001356.01.T01:intron 35.0%
! GAGTCTATCTAAGATCAGTT+TGG - Chr1:19847402-19847421 None:intergenic 35.0%
! GGACTTGAGCATTACATTTT+TGG - Chr1:19852102-19852121 None:intergenic 35.0%
! GGATTTGAGGTTTAACCAAT+AGG - Chr1:19845892-19845911 None:intergenic 35.0%
! GTGTGATATTGGTTATGATG+TGG - Chr1:19853584-19853603 None:intergenic 35.0%
! TAAGATCATAAATACCGGCT+TGG + Chr1:19851101-19851120 MsG0180001356.01.T01:intron 35.0%
! TCAGTTAGCTTATAACAAGG+TGG + Chr1:19852018-19852037 MsG0180001356.01.T01:intron 35.0%
! TCCTCAGTTAGCTTATAACA+AGG + Chr1:19852015-19852034 MsG0180001356.01.T01:intron 35.0%
! TCGTGTCGGTAAAAATTTGA+AGG + Chr1:19847024-19847043 MsG0180001356.01.T01:intron 35.0%
! TCTTTTGTGCTAATTCCATC+TGG + Chr1:19846354-19846373 MsG0180001356.01.T01:intron 35.0%
! TTGGTTGTCGTTCTTGTTAT+TGG + Chr1:19846899-19846918 MsG0180001356.01.T01:intron 35.0%
!! AACACTGATTTACACCTTAG+GGG - Chr1:19850811-19850830 None:intergenic 35.0%
!! AACAGTTTTATCACGCAATG+AGG - Chr1:19849037-19849056 None:intergenic 35.0%
!! AATCAACAAAAAGGTGCTTC+AGG - Chr1:19845859-19845878 None:intergenic 35.0%
!! ACAACACTGATTTACACCTT+AGG - Chr1:19850813-19850832 None:intergenic 35.0%
!! ATCAACAAAAAGGTGCTTCA+GGG - Chr1:19845858-19845877 None:intergenic 35.0%
!! CAACACTGATTTACACCTTA+GGG - Chr1:19850812-19850831 None:intergenic 35.0%
!! CATGATCTCCAATCACTTTT+CGG + Chr1:19851755-19851774 MsG0180001356.01.T01:intron 35.0%
!! CTGAATCTGTGATGTTTTTG+AGG + Chr1:19846272-19846291 MsG0180001356.01.T01:intron 35.0%
!! TCCTAAATAATCGGCTTGTA+AGG + Chr1:19847459-19847478 MsG0180001356.01.T01:intron 35.0%
!! TTCTGGGATGATGATGTATT+CGG + Chr1:19846695-19846714 MsG0180001356.01.T01:CDS 35.0%
!! TTGGTTTTTGAGGACTACTA+AGG - Chr1:19847838-19847857 None:intergenic 35.0%
!!! TCTTTTTTTGCCCTCTTTCA+TGG + Chr1:19848963-19848982 MsG0180001356.01.T01:intron 35.0%
!!! TTTCCCCTATTTTTACTGTC+AGG + Chr1:19850957-19850976 MsG0180001356.01.T01:intron 35.0%
!!! TTTTGGGACAATGTTATCGA+TGG - Chr1:19850583-19850602 None:intergenic 35.0%
AAAGATGGAGGACAGACAAA+AGG - Chr1:19848401-19848420 None:intergenic 40.0%
AAATCACACTTCATTCGGAG+GGG - Chr1:19852203-19852222 None:intergenic 40.0%
AACCTATGGACAGAAGTCAA+CGG + Chr1:19850261-19850280 MsG0180001356.01.T01:CDS 40.0%
AATCTGGGTGCAATATTGAG+AGG - Chr1:19852050-19852069 None:intergenic 40.0%
ACAACGCTTTGACATTTGTG+TGG + Chr1:19848826-19848845 MsG0180001356.01.T01:intron 40.0%
ACAACTCTTAGAATCTGGGT+TGG + Chr1:19847210-19847229 MsG0180001356.01.T01:intron 40.0%
ACAATGTTATCGATGGCAGA+TGG - Chr1:19850576-19850595 None:intergenic 40.0%
ACTCCGGAATAGTGTGATAT+TGG - Chr1:19853595-19853614 None:intergenic 40.0%
AGTGCAATGAACTTCTTGAC+TGG - Chr1:19851630-19851649 None:intergenic 40.0%
ATATCCGTCACAAATTGGCA+TGG - Chr1:19850503-19850522 None:intergenic 40.0%
ATCAAAAACTAGGAAAGGCC+AGG - Chr1:19850892-19850911 None:intergenic 40.0%
ATCAAATGCCAAATGGGTAG+TGG + Chr1:19846020-19846039 MsG0180001356.01.T01:five_prime_UTR 40.0%
ATCAGCAAAAACACCTGGAT+AGG - Chr1:19851351-19851370 None:intergenic 40.0%
ATGATGTATTCGGGGAATTC+AGG + Chr1:19846705-19846724 MsG0180001356.01.T01:CDS 40.0%
ATGGCCTGTTCAGTTTGAAA+AGG + Chr1:19853027-19853046 MsG0180001356.01.T01:intron 40.0%
ATTGAAGCATGATGCAGGTT+TGG + Chr1:19846809-19846828 MsG0180001356.01.T01:CDS 40.0%
ATTGCTGCTGCATAGTAACT+TGG + Chr1:19847091-19847110 MsG0180001356.01.T01:intron 40.0%
CACTTGTGAGACTATTTGGA+AGG - Chr1:19853194-19853213 None:intergenic 40.0%
CAGAGAGAGATATGGATTTG+AGG - Chr1:19845905-19845924 None:intergenic 40.0%
CGTTGTTAGTAGGAATTCGT+CGG + Chr1:19846728-19846747 MsG0180001356.01.T01:CDS 40.0%
CTAAAGAGGAGTCCTGTTTA+TGG - Chr1:19850082-19850101 None:intergenic 40.0%
CTAAATTAGCCCACCCAAAT+TGG - Chr1:19851192-19851211 None:intergenic 40.0%
CTGACATCCCAGAAATGAAT+CGG - Chr1:19850023-19850042 None:intergenic 40.0%
CTTTGAGTAGGCAATCTTGA+TGG - Chr1:19853489-19853508 None:intergenic 40.0%
GAAGAGAAAGAAAACCCAGA+TGG - Chr1:19846372-19846391 None:intergenic 40.0%
GAATCCCTCTATAATGTGCT+TGG - Chr1:19848593-19848612 None:intergenic 40.0%
GAATTCCCTTGAGCTTCTAA+AGG + Chr1:19851511-19851530 MsG0180001356.01.T01:intron 40.0%
GACTCCAAGCACATTATAGA+GGG + Chr1:19848586-19848605 MsG0180001356.01.T01:intron 40.0%
GAGCTAGGACTTGTCTAATT+AGG + Chr1:19848355-19848374 MsG0180001356.01.T01:intron 40.0%
GCTGCATAGTAACTTGGTTT+CGG + Chr1:19847097-19847116 MsG0180001356.01.T01:intron 40.0%
GGGTTGAATCATGATACTTC+TGG + Chr1:19846678-19846697 MsG0180001356.01.T01:CDS 40.0%
GTTAGGACTGAGAGAAAGTT+AGG - Chr1:19851666-19851685 None:intergenic 40.0%
TAACAACTACTAGGTGGAAC+TGG + Chr1:19850413-19850432 MsG0180001356.01.T01:intron 40.0%
TACACTTGTCCACTTTGAGT+AGG - Chr1:19853501-19853520 None:intergenic 40.0%
TATCTTGTCCAAGGTTCAGA+TGG - Chr1:19852253-19852272 None:intergenic 40.0%
TCAAGATTGCCTACTCAAAG+TGG + Chr1:19853489-19853508 MsG0180001356.01.T01:CDS 40.0%
TCAATATTGCACCCAGATTC+TGG + Chr1:19852051-19852070 MsG0180001356.01.T01:intron 40.0%
TCTGTATCATGTCGAAGGAA+TGG + Chr1:19851555-19851574 MsG0180001356.01.T01:intron 40.0%
TCTTCTTCAGGATAAGCCAA+TGG + Chr1:19850169-19850188 MsG0180001356.01.T01:intron 40.0%
TGGAGAAAAGAGGTAAGGTA+AGG - Chr1:19849272-19849291 None:intergenic 40.0%
TGTCAACCATGTCACAAGTA+TGG + Chr1:19851842-19851861 MsG0180001356.01.T01:intron 40.0%
TGTGTGGGAAGAATAATTGG+TGG - Chr1:19846069-19846088 None:intergenic 40.0%
TGTTAGTAGCTTACCTGAGA+TGG + Chr1:19846635-19846654 MsG0180001356.01.T01:CDS 40.0%
TTACCTGAGATGGTTCCAAT+GGG + Chr1:19846645-19846664 MsG0180001356.01.T01:CDS 40.0%
TTATGCTCTTTGCGTCTTTC+TGG + Chr1:19847961-19847980 MsG0180001356.01.T01:intron 40.0%
TTCGTGTGTATCACAACCTA+TGG + Chr1:19850247-19850266 MsG0180001356.01.T01:CDS 40.0%
TTGACGTACCTCATGATACT+CGG - Chr1:19849006-19849025 None:intergenic 40.0%
TTGTGATACACACGAATACG+TGG - Chr1:19850243-19850262 None:intergenic 40.0%
! AGCATTTGGCTCATTATACC+AGG - Chr1:19852738-19852757 None:intergenic 40.0%
! CAAACATTTATGAAGCACCC+CGG + Chr1:19851945-19851964 MsG0180001356.01.T01:intron 40.0%
! CTGGGTTTTCTTTCTCTTCA+AGG + Chr1:19846373-19846392 MsG0180001356.01.T01:five_prime_UTR 40.0%
! CTGTCCTCCATCTTTGTTTA+TGG + Chr1:19848406-19848425 MsG0180001356.01.T01:intron 40.0%
! GGTGTGGAAGTCAATTGTTT+TGG + Chr1:19853538-19853557 MsG0180001356.01.T01:CDS 40.0%
! TCTGGGATGATGATGTATTC+GGG + Chr1:19846696-19846715 MsG0180001356.01.T01:CDS 40.0%
! TGTAGAGAGGTTGGCATTTT+TGG + Chr1:19853517-19853536 MsG0180001356.01.T01:CDS 40.0%
! TTCGTCGGTTATAAGTCAAC+CGG + Chr1:19846743-19846762 MsG0180001356.01.T01:CDS 40.0%
!! AATAATCGGCTTGTAAGGTG+AGG + Chr1:19847464-19847483 MsG0180001356.01.T01:intron 40.0%
!! AGTTATTCTGGGGTTAGGTA+TGG + Chr1:19848656-19848675 MsG0180001356.01.T01:intron 40.0%
!! ATGCCAATTTGTGACGGATA+TGG + Chr1:19850502-19850521 MsG0180001356.01.T01:intron 40.0%
!! GACAAATTTGATGGTAGTGG+AGG - Chr1:19851911-19851930 None:intergenic 40.0%
!! TAGAGCCTTTTCAGTTTGCT+CGG + Chr1:19851694-19851713 MsG0180001356.01.T01:intron 40.0%
!! TCATATGCTCTAAGACTACC+TGG + Chr1:19850871-19850890 MsG0180001356.01.T01:intron 40.0%
!! TGCTTTGGTGATGAAACCAT+TGG - Chr1:19850188-19850207 None:intergenic 40.0%
!! TTGGAAGTTATTCTGGGGTT+AGG + Chr1:19848651-19848670 MsG0180001356.01.T01:intron 40.0%
!!! CAATTGTTTTGGTGCTGCAT+GGG + Chr1:19853549-19853568 MsG0180001356.01.T01:CDS 40.0%
!!! TCAATTGTTTTGGTGCTGCA+TGG + Chr1:19853548-19853567 MsG0180001356.01.T01:CDS 40.0%
AAACTCACACACACAAGTGG+AGG + Chr1:19848272-19848291 MsG0180001356.01.T01:intron 45.0%
AACTCACTCTTCTCAAGCCT+AGG + Chr1:19847332-19847351 MsG0180001356.01.T01:intron 45.0%
AACTCAGCTAGACACAGCAA+GGG + Chr1:19852298-19852317 MsG0180001356.01.T01:intron 45.0%
ACTGCCATGCCAATTTGTGA+CGG + Chr1:19850496-19850515 MsG0180001356.01.T01:intron 45.0%
AGCATCCTATAAAGGAGACC+GGG - Chr1:19851966-19851985 None:intergenic 45.0%
AGCATGTCTAGCCATGAAAG+AGG - Chr1:19848977-19848996 None:intergenic 45.0%
ATCATGCTTCAATCCAGGGA+CGG - Chr1:19846802-19846821 None:intergenic 45.0%
ATCCCAGATAGCGAAAGTAG+CGG + Chr1:19848561-19848580 MsG0180001356.01.T01:intron 45.0%
ATGCATCCTTGCTGCATTTC+TGG + Chr1:19848031-19848050 MsG0180001356.01.T01:intron 45.0%
ATGTTATCGATGGCAGATGG+CGG - Chr1:19850573-19850592 None:intergenic 45.0%
CAAAGTGGACAAGTGTAGAG+AGG + Chr1:19853504-19853523 MsG0180001356.01.T01:CDS 45.0%
CACTCTAGATATCCAGTCCT+AGG - Chr1:19847352-19847371 None:intergenic 45.0%
CAGAACCGAGCAAACTGAAA+AGG - Chr1:19851702-19851721 None:intergenic 45.0%
CAGCATAGCCGAAAAGTGAT+TGG - Chr1:19851766-19851785 None:intergenic 45.0%
CAGGCACTTGTGAGACTATT+TGG - Chr1:19853198-19853217 None:intergenic 45.0%
CCACTATAGCGCCAAAATAG+TGG - Chr1:19848702-19848721 None:intergenic 45.0%
CCTTCGCTTTCTCTGCAAAA+TGG - Chr1:19849441-19849460 None:intergenic 45.0%
CGACTCCAAGCACATTATAG+AGG + Chr1:19848585-19848604 MsG0180001356.01.T01:intron 45.0%
CTGCATCATGCTTCAATCCA+GGG - Chr1:19846806-19846825 None:intergenic 45.0%
CTTACCTGAGATGGTTCCAA+TGG + Chr1:19846644-19846663 MsG0180001356.01.T01:CDS 45.0%
GAGCATCCTATAAAGGAGAC+CGG - Chr1:19851967-19851986 None:intergenic 45.0%
GATTCGAGTAAGCTGATGGT+GGG + Chr1:19847373-19847392 MsG0180001356.01.T01:intron 45.0%
GATTGGAGATCATGCACTTG+AGG - Chr1:19851749-19851768 None:intergenic 45.0%
GCACCTTGAAGTATGCACAT+AGG + Chr1:19849396-19849415 MsG0180001356.01.T01:intron 45.0%
GCATGTCTAGCCATGAAAGA+GGG - Chr1:19848976-19848995 None:intergenic 45.0%
GCCACATTGGGTGAGATATA+GGG - Chr1:19847521-19847540 None:intergenic 45.0%
GGGTTTGCAGCATTTGATGT+TGG - Chr1:19848501-19848520 None:intergenic 45.0%
GTAGTCCTCACCATACAAAC+TGG - Chr1:19847257-19847276 None:intergenic 45.0%
GTGTGATTCGAGTAAGCTGA+TGG + Chr1:19847369-19847388 MsG0180001356.01.T01:intron 45.0%
GTGTGCAACTGTTGGAACTT+CGG - Chr1:19852148-19852167 None:intergenic 45.0%
TAGACAAGTCCTAGCTCAAC+TGG - Chr1:19848352-19848371 None:intergenic 45.0%
TATAGTGGCTGCTAATGCTG+TGG + Chr1:19848714-19848733 MsG0180001356.01.T01:intron 45.0%
TGACAATAATGACGCCTGTG+CGG - Chr1:19850931-19850950 None:intergenic 45.0%
TGACCAGTTCCAAGTCTTCT+GGG + Chr1:19850776-19850795 MsG0180001356.01.T01:intron 45.0%
TGATTCGAGTAAGCTGATGG+TGG + Chr1:19847372-19847391 MsG0180001356.01.T01:intron 45.0%
TGTAACCACATGTGTCGTGT+CGG + Chr1:19847010-19847029 MsG0180001356.01.T01:intron 45.0%
TTGACCAGTTCCAAGTCTTC+TGG + Chr1:19850775-19850794 MsG0180001356.01.T01:intron 45.0%
TTTCCCATTGGAACCATCTC+AGG - Chr1:19846651-19846670 None:intergenic 45.0%
! AGCATTTTGCCAGTTGAGCT+AGG + Chr1:19848340-19848359 MsG0180001356.01.T01:intron 45.0%
! AGTGAGCCTTTAGAAGCTCA+AGG - Chr1:19851520-19851539 None:intergenic 45.0%
! ATGCAATAGCGGAGCTATAG+CGG - Chr1:19848799-19848818 None:intergenic 45.0%
! ATTCTCCCTGGTGCCAATTT+GGG + Chr1:19851176-19851195 MsG0180001356.01.T01:intron 45.0%
! CCATTTTGCAGAGAAAGCGA+AGG + Chr1:19849438-19849457 MsG0180001356.01.T01:intron 45.0%
! CGGGGTGCTTCATAAATGTT+TGG - Chr1:19851947-19851966 None:intergenic 45.0%
! CTGGGATGATGATGTATTCG+GGG + Chr1:19846697-19846716 MsG0180001356.01.T01:CDS 45.0%
! GGAATTCAGGCGTTGTTAGT+AGG + Chr1:19846718-19846737 MsG0180001356.01.T01:CDS 45.0%
! GTGAGCCTTTAGAAGCTCAA+GGG - Chr1:19851519-19851538 None:intergenic 45.0%
! TCGTCGGTTATAAGTCAACC+GGG + Chr1:19846744-19846763 MsG0180001356.01.T01:CDS 45.0%
! TGTAGCGGAGCAGTTTAAAC+TGG - Chr1:19848740-19848759 None:intergenic 45.0%
! TTTGAAGGCATGTCTGACAC+TGG + Chr1:19847039-19847058 MsG0180001356.01.T01:intron 45.0%
! TTTTACCGACACGACACATG+TGG - Chr1:19847018-19847037 None:intergenic 45.0%
!! ACAAAGCTTTGAGGCCACAT+TGG - Chr1:19847534-19847553 None:intergenic 45.0%
!! ACACAGGAAGTGGAAGCATT+TGG - Chr1:19852752-19852771 None:intergenic 45.0%
!! ACCATACAAACTGGTGTCGT+AGG - Chr1:19847248-19847267 None:intergenic 45.0%
!! ATCCGTTGACTTCTGTCCAT+AGG - Chr1:19850266-19850285 None:intergenic 45.0%
!! ATGTTGCTTTGAGGTGTAGG+TGG + Chr1:19849061-19849080 MsG0180001356.01.T01:CDS 45.0%
!! CAAAGCTTTGAGGCCACATT+GGG - Chr1:19847533-19847552 None:intergenic 45.0%
!! CCAATTTGTGACGGATATGG+CGG + Chr1:19850505-19850524 MsG0180001356.01.T01:intron 45.0%
!! CCATACAAACTGGTGTCGTA+GGG - Chr1:19847247-19847266 None:intergenic 45.0%
!! CTGTTCGTGATGTTGCTTTG+AGG + Chr1:19849052-19849071 MsG0180001356.01.T01:CDS 45.0%
!! GATCATAAATACCGGCTTGG+TGG + Chr1:19851104-19851123 MsG0180001356.01.T01:intron 45.0%
!! GTGATGTTGCTTTGAGGTGT+AGG + Chr1:19849058-19849077 MsG0180001356.01.T01:CDS 45.0%
!!! AGAGGTTGGCATTTTTGGTG+TGG + Chr1:19853522-19853541 MsG0180001356.01.T01:CDS 45.0%
!!! CCACTATTTTGGCGCTATAG+TGG + Chr1:19848699-19848718 MsG0180001356.01.T01:intron 45.0%
!!! TATGGCGATTGGTGGACTTT+TGG + Chr1:19850533-19850552 MsG0180001356.01.T01:intron 45.0%
!! AAAAAAAAAAAAATAAAGAT+AGG + Chr1:19847688-19847707 MsG0180001356.01.T01:intron 5.0%
!! TAAAAATGTATTTATATATA+TGG - Chr1:19847283-19847302 None:intergenic 5.0%
!!! ATATATATAAATACATTTTT+AGG + Chr1:19847282-19847301 MsG0180001356.01.T01:intron 5.0%
!!! TTTATTTGTTTTTTTATATA+TGG + Chr1:19846235-19846254 MsG0180001356.01.T01:intron 5.0%
ACGAATACGTGGCCACACTT+GGG - Chr1:19850232-19850251 None:intergenic 50.0%
ACTCTTCTCAAGCCTAGGAC+TGG + Chr1:19847337-19847356 MsG0180001356.01.T01:intron 50.0%
ACTGGCTGCATACACTGCTT+TGG - Chr1:19850203-19850222 None:intergenic 50.0%
AGCATGTCCTGTAGTGTCCA+GGG + Chr1:19848759-19848778 MsG0180001356.01.T01:intron 50.0%
ATGGGACATTGCACCTATCC+AGG + Chr1:19851335-19851354 MsG0180001356.01.T01:intron 50.0%
CAACTCAGCTAGACACAGCA+AGG + Chr1:19852297-19852316 MsG0180001356.01.T01:intron 50.0%
CACTACAGGACATGCTGTAG+CGG - Chr1:19848755-19848774 None:intergenic 50.0%
CAGTTCCAAGTCTTCTGGGT+AGG + Chr1:19850780-19850799 MsG0180001356.01.T01:intron 50.0%
CCAAGTCAATACCACCAAGC+CGG - Chr1:19851118-19851137 None:intergenic 50.0%
CCCTACGACACCAGTTTGTA+TGG + Chr1:19847244-19847263 MsG0180001356.01.T01:intron 50.0%
CCGCCATATCCGTCACAAAT+TGG - Chr1:19850508-19850527 None:intergenic 50.0%
CCTGCATCATGCTTCAATCC+AGG - Chr1:19846807-19846826 None:intergenic 50.0%
CCTGGATTGAAGCATGATGC+AGG + Chr1:19846804-19846823 MsG0180001356.01.T01:CDS 50.0%
CGACACCAGTTTGTATGGTG+AGG + Chr1:19847249-19847268 MsG0180001356.01.T01:intron 50.0%
CGGAGGGGATGATCAGAAAA+AGG - Chr1:19852188-19852207 None:intergenic 50.0%
CTACCCAGAAGACTTGGAAC+TGG - Chr1:19850782-19850801 None:intergenic 50.0%
CTCAAGTCCCTACGTAGCAT+TGG + Chr1:19852113-19852132 MsG0180001356.01.T01:intron 50.0%
CTCACAAGTGCCTGTGTTTG+TGG + Chr1:19853204-19853223 MsG0180001356.01.T01:intron 50.0%
CTGATGAGCCGAGTATCATG+AGG + Chr1:19848995-19849014 MsG0180001356.01.T01:CDS 50.0%
GATACGCAGCTCCAGAATCT+GGG - Chr1:19852065-19852084 None:intergenic 50.0%
GCACACTACGATGCTTCACT+TGG + Chr1:19852162-19852181 MsG0180001356.01.T01:intron 50.0%
GCATCCTATAAAGGAGACCG+GGG - Chr1:19851965-19851984 None:intergenic 50.0%
GCATCGTAGTGTGCAACTGT+TGG - Chr1:19852156-19852175 None:intergenic 50.0%
GCCCTATATCTCACCCAATG+TGG + Chr1:19847517-19847536 MsG0180001356.01.T01:intron 50.0%
GGAGAACCAGAAATGCAGCA+AGG - Chr1:19848040-19848059 None:intergenic 50.0%
GGCCACATTGGGTGAGATAT+AGG - Chr1:19847522-19847541 None:intergenic 50.0%
GGTGGTTATTGTGAGTGCAG+TGG - Chr1:19846051-19846070 None:intergenic 50.0%
GTGGACAAGTGTAGAGAGGT+TGG + Chr1:19853508-19853527 MsG0180001356.01.T01:CDS 50.0%
TCGTCAATCGACACAGGAAG+TGG - Chr1:19852762-19852781 None:intergenic 50.0%
TGATACGCAGCTCCAGAATC+TGG - Chr1:19852066-19852085 None:intergenic 50.0%
TGTTGGAACTTCGGCTCACA+GGG - Chr1:19852139-19852158 None:intergenic 50.0%
TTGCTCCAAGAGTCGCTTCA+CGG - Chr1:19850994-19851013 None:intergenic 50.0%
! ACACACACAAGTGGAGGTAC+CGG + Chr1:19848278-19848297 MsG0180001356.01.T01:intron 50.0%
! AGCTGCGGCATCCACTATTT+TGG + Chr1:19848688-19848707 MsG0180001356.01.T01:intron 50.0%
! CGTCGGTTATAAGTCAACCG+GGG + Chr1:19846745-19846764 MsG0180001356.01.T01:CDS 50.0%
! GACCGCTACTTTCGCTATCT+GGG - Chr1:19848566-19848585 None:intergenic 50.0%
! GATTCTCCCTGGTGCCAATT+TGG + Chr1:19851175-19851194 MsG0180001356.01.T01:intron 50.0%
!! ACTTCCTGTGTCGATTGACG+AGG + Chr1:19852761-19852780 MsG0180001356.01.T01:CDS 50.0%
!! CGGCTTGGTGGTATTGACTT+GGG + Chr1:19851116-19851135 MsG0180001356.01.T01:intron 50.0%
!! CTTCTTGTTGATTCCGTCCC+TGG + Chr1:19846786-19846805 MsG0180001356.01.T01:CDS 50.0%
!! GTGGTATTGACTTGGGACCT+GGG + Chr1:19851123-19851142 MsG0180001356.01.T01:intron 50.0%
!! TGGTGTCGTAGGGTTGAGTT+AGG - Chr1:19847237-19847256 None:intergenic 50.0%
!! TTTGGTGCTGCATGGGATTG+AGG + Chr1:19853556-19853575 MsG0180001356.01.T01:CDS 50.0%
AAGTCCTCCTTCTGTCGCAG+AGG + Chr1:19851792-19851811 MsG0180001356.01.T01:intron 55.0%
ACCATGACCTCTGCGACAGA+AGG - Chr1:19851802-19851821 None:intergenic 55.0%
ACGGATATGGCGGCGTCATA+TGG + Chr1:19850515-19850534 MsG0180001356.01.T01:intron 55.0%
AGCACCCCGGTCTCCTTTAT+AGG + Chr1:19851958-19851977 MsG0180001356.01.T01:intron 55.0%
AGGTCCTCGTCAATCGACAC+AGG - Chr1:19852768-19852787 None:intergenic 55.0%
ATGACCTCTGCGACAGAAGG+AGG - Chr1:19851799-19851818 None:intergenic 55.0%
ATGCAGGTTTGGCTGCTGAG+TGG + Chr1:19846820-19846839 MsG0180001356.01.T01:CDS 55.0%
CACAGGGCCAATGCTACGTA+GGG - Chr1:19852123-19852142 None:intergenic 55.0%
CACGAATACGTGGCCACACT+TGG - Chr1:19850233-19850252 None:intergenic 55.0%
CAGCATGTCCTGTAGTGTCC+AGG + Chr1:19848758-19848777 MsG0180001356.01.T01:intron 55.0%
CCAAGTCTTCTGGGTAGGCT+AGG + Chr1:19850785-19850804 MsG0180001356.01.T01:intron 55.0%
CCTAGCCTACCCAGAAGACT+TGG - Chr1:19850788-19850807 None:intergenic 55.0%
CGAATACGTGGCCACACTTG+GGG - Chr1:19850231-19850250 None:intergenic 55.0%
CTGTTGGAACTTCGGCTCAC+AGG - Chr1:19852140-19852159 None:intergenic 55.0%
GAATCGCACCTGAGACCTTG+AGG - Chr1:19851160-19851179 None:intergenic 55.0%
GCATGTCCTGTAGTGTCCAG+GGG + Chr1:19848760-19848779 MsG0180001356.01.T01:intron 55.0%
GCCACACTTGGGGTTAGAAC+TGG - Chr1:19850221-19850240 None:intergenic 55.0%
GTATGGCACTGTAGCAGCTG+CGG + Chr1:19848673-19848692 MsG0180001356.01.T01:intron 55.0%
GTGTCTTAGTGTCACCGCAC+AGG + Chr1:19850914-19850933 MsG0180001356.01.T01:intron 55.0%
GTTAGGCCGGATGTCATGAC+CGG - Chr1:19848314-19848333 None:intergenic 55.0%
TCACAGGGCCAATGCTACGT+AGG - Chr1:19852124-19852143 None:intergenic 55.0%
TCCTTCTGTCGCAGAGGTCA+TGG + Chr1:19851798-19851817 MsG0180001356.01.T01:intron 55.0%
TCGACCTCCTCAGTCAGACA+CGG + Chr1:19852549-19852568 MsG0180001356.01.T01:CDS 55.0%
TGATCCCGTGAAGCGACTCT+TGG + Chr1:19850986-19851005 MsG0180001356.01.T01:CDS 55.0%
TGCTCCAAGAGTCGCTTCAC+GGG - Chr1:19850993-19851012 None:intergenic 55.0%
TGTCGCAGAGGTCATGGTCA+GGG + Chr1:19851804-19851823 MsG0180001356.01.T01:intron 55.0%
TGTTGTGCCGTGTCTGACTG+AGG - Chr1:19852559-19852578 None:intergenic 55.0%
TTAGGCCGGATGTCATGACC+GGG - Chr1:19848313-19848332 None:intergenic 55.0%
! CGACCGCTACTTTCGCTATC+TGG - Chr1:19848567-19848586 None:intergenic 55.0%
! GCCAGTTCTAACCCCAAGTG+TGG + Chr1:19850217-19850236 MsG0180001356.01.T01:CDS 55.0%
! TCCCTGGTGCCAATTTGGGT+GGG + Chr1:19851180-19851199 MsG0180001356.01.T01:intron 55.0%
! TGGCAGTGCCACTACCCATT+TGG - Chr1:19846031-19846050 None:intergenic 55.0%
!! ACACACAAGTGGAGGTACCG+GGG + Chr1:19848280-19848299 MsG0180001356.01.T01:intron 55.0%
!! CACACACAAGTGGAGGTACC+GGG + Chr1:19848279-19848298 MsG0180001356.01.T01:intron 55.0%
!! CCGGCTTGGTGGTATTGACT+TGG + Chr1:19851115-19851134 MsG0180001356.01.T01:intron 55.0%
!! GGTGGTATTGACTTGGGACC+TGG + Chr1:19851122-19851141 MsG0180001356.01.T01:intron 55.0%
!!! GGACTTTTGGCTTTCCGCCA+TGG + Chr1:19850546-19850565 MsG0180001356.01.T01:intron 55.0%
AGCCCACCCAAATTGGCACC+AGG - Chr1:19851185-19851204 None:intergenic 60.0%
AGTCAACCGGGGATTGCGTC+TGG + Chr1:19846756-19846775 MsG0180001356.01.T01:CDS 60.0%
CGAACCCCGGTCATGACATC+CGG + Chr1:19848305-19848324 MsG0180001356.01.T01:intron 60.0%
CGGCGTCATATGGCGATTGG+TGG + Chr1:19850525-19850544 MsG0180001356.01.T01:intron 60.0%
CTGTCGCAGAGGTCATGGTC+AGG + Chr1:19851803-19851822 MsG0180001356.01.T01:intron 60.0%
GAACAGCCAGACGCAATCCC+CGG - Chr1:19846765-19846784 None:intergenic 60.0%
GCCCACCCAAATTGGCACCA+GGG - Chr1:19851184-19851203 None:intergenic 60.0%
GGCAATGCGAATTGCGGTGC+TGG + Chr1:19850462-19850481 MsG0180001356.01.T01:intron 60.0%
GTCGCAGAGGTCATGGTCAG+GGG + Chr1:19851805-19851824 MsG0180001356.01.T01:intron 60.0%
GTCTCAGGTGCGATTCTCCC+TGG + Chr1:19851164-19851183 MsG0180001356.01.T01:intron 60.0%
GTGCTCCTCCTCAAGGTCTC+AGG + Chr1:19851149-19851168 MsG0180001356.01.T01:intron 60.0%
TAGGCCGGATGTCATGACCG+GGG - Chr1:19848312-19848331 None:intergenic 60.0%
TCGCACCTGAGACCTTGAGG+AGG - Chr1:19851157-19851176 None:intergenic 60.0%
TCGCAGAGGTCATGGTCAGG+GGG + Chr1:19851806-19851825 MsG0180001356.01.T01:intron 60.0%
TGCAGCATGAGAGCGATGCC+TGG + Chr1:19852717-19852736 MsG0180001356.01.T01:intron 60.0%
TGGCGGCGTCATATGGCGAT+TGG + Chr1:19850522-19850541 MsG0180001356.01.T01:intron 60.0%
TGTGCCGTGTCTGACTGAGG+AGG - Chr1:19852556-19852575 None:intergenic 60.0%
! CTCCCTGGTGCCAATTTGGG+TGG + Chr1:19851179-19851198 MsG0180001356.01.T01:intron 60.0%
! TGGGAGTGTGCTCCTCCTCA+AGG + Chr1:19851142-19851161 MsG0180001356.01.T01:intron 60.0%
! TTGAGGAGGAGCACACTCCC+AGG - Chr1:19851143-19851162 None:intergenic 60.0%
CATGACCGGGGTTCGAACCC+CGG - Chr1:19848300-19848319 None:intergenic 65.0%
CGGTGTAGTTGAGCGACCCC+TGG - Chr1:19848779-19848798 None:intergenic 65.0%
CTGGGTAGGCTAGGCCCCTA+AGG + Chr1:19850794-19850813 MsG0180001356.01.T01:intron 65.0%
GAGCGACCCCTGGACACTAC+AGG - Chr1:19848769-19848788 None:intergenic 65.0%
!! AGGTACCGGGGTTCGAACCC+CGG + Chr1:19848292-19848311 MsG0180001356.01.T01:intron 65.0%
!! CGATGGCAGATGGCGGACCA+TGG - Chr1:19850566-19850585 None:intergenic 65.0%
!! TGGCAGATGGCGGACCATGG+CGG - Chr1:19850563-19850582 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 19845806 19853631 19845806 ID=MsG0180001356.01;Name=MsG0180001356.01
Chr1 mRNA 19845806 19853631 19845806 ID=MsG0180001356.01.T01;Parent=MsG0180001356.01;Name=MsG0180001356.01.T01;_AED=0.41;_eAED=0.41;_QI=527|0.75|0.77|1|0.87|0.77|9|0|337
Chr1 exon 19845806 19846146 19845806 ID=MsG0180001356.01.T01:exon:14475;Parent=MsG0180001356.01.T01
Chr1 exon 19846360 19846883 19846360 ID=MsG0180001356.01.T01:exon:14476;Parent=MsG0180001356.01.T01
Chr1 exon 19848990 19849089 19848990 ID=MsG0180001356.01.T01:exon:14477;Parent=MsG0180001356.01.T01
Chr1 exon 19849449 19849502 19849449 ID=MsG0180001356.01.T01:exon:14478;Parent=MsG0180001356.01.T01
Chr1 exon 19850179 19850299 19850179 ID=MsG0180001356.01.T01:exon:14479;Parent=MsG0180001356.01.T01
Chr1 exon 19850979 19851061 19850979 ID=MsG0180001356.01.T01:exon:14480;Parent=MsG0180001356.01.T01
Chr1 exon 19852536 19852597 19852536 ID=MsG0180001356.01.T01:exon:14481;Parent=MsG0180001356.01.T01
Chr1 exon 19852722 19852818 19852722 ID=MsG0180001356.01.T01:exon:14482;Parent=MsG0180001356.01.T01
Chr1 exon 19853473 19853631 19853473 ID=MsG0180001356.01.T01:exon:14483;Parent=MsG0180001356.01.T01
Chr1 five_prime_UTR 19845806 19846146 19845806 ID=MsG0180001356.01.T01:five_prime_utr;Parent=MsG0180001356.01.T01
Chr1 five_prime_UTR 19846360 19846545 19846360 ID=MsG0180001356.01.T01:five_prime_utr;Parent=MsG0180001356.01.T01
Chr1 CDS 19846546 19846883 19846546 ID=MsG0180001356.01.T01:cds;Parent=MsG0180001356.01.T01
Chr1 CDS 19848990 19849089 19848990 ID=MsG0180001356.01.T01:cds;Parent=MsG0180001356.01.T01
Chr1 CDS 19849449 19849502 19849449 ID=MsG0180001356.01.T01:cds;Parent=MsG0180001356.01.T01
Chr1 CDS 19850179 19850299 19850179 ID=MsG0180001356.01.T01:cds;Parent=MsG0180001356.01.T01
Chr1 CDS 19850979 19851061 19850979 ID=MsG0180001356.01.T01:cds;Parent=MsG0180001356.01.T01
Chr1 CDS 19852536 19852597 19852536 ID=MsG0180001356.01.T01:cds;Parent=MsG0180001356.01.T01
Chr1 CDS 19852722 19852818 19852722 ID=MsG0180001356.01.T01:cds;Parent=MsG0180001356.01.T01
Chr1 CDS 19853473 19853631 19853473 ID=MsG0180001356.01.T01:cds;Parent=MsG0180001356.01.T01
Gene Sequence

>MsG0180001356.01.T01

ATGGCAGCAGAGTCAAATACTGATTTTCATTATGGTGATATGAATTCATCTTTGAATTGGCATGCAATATCATTTGAATCTGGTGGTGTTGTTAGTAGCTTACCTGAGATGGTTCCAATGGGAAATTATTTTGGGTTGAATCATGATACTTCTGGGATGATGATGTATTCGGGGAATTCAGGCGTTGTTAGTAGGAATTCGTCGGTTATAAGTCAACCGGGGATTGCGTCTGGCTGTTCTCTTCTTGTTGATTCCGTCCCTGGATTGAAGCATGATGCAGGTTTGGCTGCTGAGTGGTCTGTTGATGAACAGTATAAATTGGAGGAGGGGCTTCTCAAACATGCTGATGAGCCGAGTATCATGAGGTACGTCAAAATTGCTGCCTCATTGCGTGATAAAACTGTTCGTGATGTTGCTTTGAGGTGTAGGTGGATGACTAGAAAGCGAAGGAAATCAGAAGAGCACATGTTAAAGAAGGTCAACAATAGGAAGGATAAGCCAATGGTTTCATCACCAAAGCAGTGTATGCAGCCAGTTCTAACCCCAAGTGTGGCCACGTATTCGTGTGTATCACAACCTATGGACAGAAGTCAACGGATACCATATGATAATGGAATTTGTGATCCCGTGAAGCGACTCTTGGAGCAAAATGCTCAAGCTTTTAGTCAAATAAATTCCAATTTATCTACTTTCAAGTTGCAGGATAACATCGACCTCCTCAGTCAGACACGGCACAACATTAGTACCATTCTTGATGACATGAGAGCGATGCCTGGTATAATGAGCCAAATGCTTCCACTTCCTGTGTCGATTGACGAGGACCTTGCAAGTAGTATATTACATAATAAAACTCAGGAAATTTCTGACTCCATCAAGATTGCCTACTCAAAGTGGACAAGTGTAGAGAGGTTGGCATTTTTGGTGTGGAAGTCAATTGTTTTGGTGCTGCATGGGATTGAGGAGCCACATCATAACCAATATCACACTATTCCGGAGTTTCTAATTCATCTTTGA

Protein sequence

>MsG0180001356.01.T01

MAAESNTDFHYGDMNSSLNWHAISFESGGVVSSLPEMVPMGNYFGLNHDTSGMMMYSGNSGVVSRNSSVISQPGIASGCSLLVDSVPGLKHDAGLAAEWSVDEQYKLEEGLLKHADEPSIMRYVKIAASLRDKTVRDVALRCRWMTRKRRKSEEHMLKKVNNRKDKPMVSSPKQCMQPVLTPSVATYSCVSQPMDRSQRIPYDNGICDPVKRLLEQNAQAFSQINSNLSTFKLQDNIDLLSQTRHNISTILDDMRAMPGIMSQMLPLPVSIDEDLASSILHNKTQEISDSIKIAYSKWTSVERLAFLVWKSIVLVLHGIEEPHHNQYHTIPEFLIHL*