Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007916.01.T01 | XP_003594849.1 | 96.815 | 157 | 5 | 0 | 1 | 157 | 1 | 157 | 8.38E-104 | 304 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007916.01.T01 | Q06931 | 86.624 | 157 | 21 | 0 | 1 | 157 | 1 | 157 | 9.10E-94 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007916.01.T01 | G7INB7 | 96.815 | 157 | 5 | 0 | 1 | 157 | 1 | 157 | 4.00e-104 | 304 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047999.01 | MsG0280007916.01 | 0.821163 | 4.671578e-53 | 3.771725e-50 |
| MsG0080048986.01 | MsG0280007916.01 | -0.811855 | 5.682319e-51 | 3.556260e-48 |
| MsG0080049133.01 | MsG0280007916.01 | -0.810512 | 1.110909e-50 | 6.709433e-48 |
| MsG0180000337.01 | MsG0280007916.01 | 0.836315 | 1.005559e-56 | 1.262775e-53 |
| MsG0180002214.01 | MsG0280007916.01 | -0.810943 | 8.964433e-51 | 5.477393e-48 |
| MsG0180002425.01 | MsG0280007916.01 | -0.810900 | 9.157873e-51 | 5.589067e-48 |
| MsG0180002463.01 | MsG0280007916.01 | -0.805143 | 1.538650e-49 | 8.079049e-47 |
| MsG0180003757.01 | MsG0280007916.01 | -0.812064 | 5.116540e-51 | 3.220290e-48 |
| MsG0180004502.01 | MsG0280007916.01 | -0.829234 | 5.769370e-55 | 5.869974e-52 |
| MsG0180004747.01 | MsG0280007916.01 | -0.801332 | 9.465488e-49 | 4.508271e-46 |
| MsG0180004773.01 | MsG0280007916.01 | -0.800017 | 1.755336e-48 | 8.086343e-46 |
| MsG0180004941.01 | MsG0280007916.01 | 0.850215 | 1.960904e-60 | 3.813236e-57 |
| MsG0180005328.01 | MsG0280007916.01 | 0.859043 | 5.432843e-63 | 1.415300e-59 |
| MsG0180005542.01 | MsG0280007916.01 | 0.822476 | 2.320831e-53 | 1.944694e-50 |
| MsG0280006883.01 | MsG0280007916.01 | 0.813466 | 2.523960e-51 | 1.649590e-48 |
| MsG0280007650.01 | MsG0280007916.01 | -0.805950 | 1.041958e-49 | 5.585608e-47 |
| MsG0280007912.01 | MsG0280007916.01 | 0.860707 | 1.712522e-63 | 4.724784e-60 |
| MsG0280007916.01 | MsG0280008405.01 | 0.815672 | 8.200797e-52 | 5.690572e-49 |
| MsG0280007916.01 | MsG0280008912.01 | -0.801765 | 7.714781e-49 | 3.714754e-46 |
| MsG0280007916.01 | MsG0280009662.01 | 0.804411 | 2.188016e-49 | 1.127334e-46 |
| MsG0280007916.01 | MsG0380013114.01 | -0.817762 | 2.787659e-52 | 2.048264e-49 |
| MsG0280007916.01 | MsG0380013272.01 | 0.811428 | 7.036689e-51 | 4.354701e-48 |
| MsG0280007916.01 | MsG0380013300.01 | 0.837476 | 5.081984e-57 | 6.609603e-54 |
| MsG0280007916.01 | MsG0380014802.01 | 0.822630 | 2.137114e-53 | 1.798771e-50 |
| MsG0280007916.01 | MsG0380015010.01 | 0.811964 | 5.379161e-51 | 3.376506e-48 |
| MsG0280007916.01 | MsG0380015654.01 | -0.843640 | 1.237666e-58 | 1.948942e-55 |
| MsG0280007916.01 | MsG0380015971.01 | -0.822772 | 1.981138e-53 | 1.674105e-50 |
| MsG0280007916.01 | MsG0380017405.01 | -0.800144 | 1.653864e-48 | 7.643608e-46 |
| MsG0280007916.01 | MsG0380018051.01 | 0.817309 | 3.524994e-52 | 2.557942e-49 |
| MsG0280007916.01 | MsG0480018463.01 | -0.828019 | 1.134619e-54 | 1.114144e-51 |
| MsG0280007916.01 | MsG0480018628.01 | -0.809017 | 2.328945e-50 | 1.352061e-47 |
| MsG0280007916.01 | MsG0480020345.01 | 0.802427 | 5.640617e-49 | 2.762393e-46 |
| MsG0280007916.01 | MsG0480022125.01 | 0.823191 | 1.581955e-53 | 1.352644e-50 |
| MsG0280007916.01 | MsG0480023107.01 | 0.811636 | 6.339524e-51 | 3.944492e-48 |
| MsG0280007916.01 | MsG0480023695.01 | -0.815841 | 7.518430e-52 | 5.240857e-49 |
| MsG0280007916.01 | MsG0580030133.01 | 0.843053 | 1.774831e-58 | 2.742986e-55 |
| MsG0280007916.01 | MsG0580030135.01 | 0.821707 | 3.498225e-53 | 2.867697e-50 |
| MsG0280007916.01 | MsG0680030315.01 | 0.816917 | 4.319266e-52 | 3.100922e-49 |
| MsG0280007916.01 | MsG0680030545.01 | 0.805686 | 1.184396e-49 | 6.306362e-47 |
| MsG0280007916.01 | MsG0680030960.01 | 0.814947 | 1.188195e-51 | 8.082695e-49 |
| MsG0280007916.01 | MsG0680030961.01 | 0.813652 | 2.296090e-51 | 1.508239e-48 |
| MsG0280007916.01 | MsG0680031240.01 | 0.812687 | 3.739493e-51 | 2.393347e-48 |
| MsG0280007916.01 | MsG0780035993.01 | 0.853812 | 1.865225e-61 | 4.080892e-58 |
| MsG0280007916.01 | MsG0780036661.01 | 0.811491 | 6.818512e-51 | 4.226679e-48 |
| MsG0280007916.01 | MsG0780039838.01 | -0.807355 | 5.264369e-50 | 2.925813e-47 |
| MsG0280007916.01 | MsG0780039839.01 | -0.825296 | 5.065463e-54 | 4.598499e-51 |
| MsG0280007916.01 | MsG0780039978.01 | 0.816807 | 4.570919e-52 | 3.271685e-49 |
| MsG0280007916.01 | MsG0780041079.01 | 0.807423 | 5.091473e-50 | 2.834801e-47 |
| MsG0280007916.01 | MsG0780041316.01 | 0.816967 | 4.207971e-52 | 3.025483e-49 |
| MsG0280007916.01 | MsG0780041783.01 | -0.800834 | 1.196566e-48 | 5.627832e-46 |
| MsG0280007916.01 | MsG0880043828.01 | 0.847055 | 1.473372e-59 | 2.586883e-56 |
| MsG0280007916.01 | MsG0880044339.01 | -0.805738 | 1.154994e-49 | 6.158181e-47 |
| MsG0280007916.01 | MsG0880045441.01 | 0.827113 | 1.871278e-54 | 1.789454e-51 |
| MsG0280007916.01 | MsG0880045683.01 | 0.848593 | 5.551997e-60 | 1.023952e-56 |
| MsG0280007916.01 | MsG0880046996.01 | 0.801272 | 9.739103e-49 | 4.631610e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007916.01.T01 | MTR_2g035320 | 96.815 | 157 | 5 | 0 | 1 | 157 | 1 | 157 | 1.01e-107 | 304 |
| MsG0280007916.01.T01 | MTR_2g035190 | 94.268 | 157 | 9 | 0 | 1 | 157 | 1 | 157 | 8.75e-105 | 296 |
| MsG0280007916.01.T01 | MTR_2g035210 | 89.809 | 157 | 16 | 0 | 1 | 157 | 1 | 157 | 1.32e-100 | 286 |
| MsG0280007916.01.T01 | MTR_2g035220 | 86.624 | 157 | 21 | 0 | 1 | 157 | 1 | 157 | 2.01e-96 | 275 |
| MsG0280007916.01.T01 | MTR_6g033450 | 64.968 | 157 | 55 | 0 | 1 | 157 | 1 | 157 | 4.18e-70 | 209 |
| MsG0280007916.01.T01 | MTR_4g120970 | 64.968 | 157 | 55 | 0 | 1 | 157 | 1 | 157 | 4.18e-70 | 209 |
| MsG0280007916.01.T01 | MTR_2g035100 | 63.694 | 157 | 57 | 0 | 1 | 157 | 1 | 157 | 8.65e-68 | 203 |
| MsG0280007916.01.T01 | MTR_2g035105 | 63.057 | 157 | 58 | 0 | 1 | 157 | 1 | 157 | 8.81e-67 | 200 |
| MsG0280007916.01.T01 | MTR_2g035130 | 61.783 | 157 | 60 | 0 | 1 | 157 | 1 | 157 | 8.05e-66 | 198 |
| MsG0280007916.01.T01 | MTR_2g035150 | 61.783 | 157 | 60 | 0 | 1 | 157 | 1 | 157 | 2.77e-65 | 196 |
| MsG0280007916.01.T01 | MTR_2g035320 | 93.000 | 100 | 7 | 0 | 58 | 157 | 23 | 122 | 1.34e-62 | 188 |
| MsG0280007916.01.T01 | MTR_2g035120 | 56.051 | 157 | 69 | 0 | 1 | 157 | 1 | 157 | 1.67e-59 | 182 |
| MsG0280007916.01.T01 | MTR_2g035170 | 45.860 | 157 | 85 | 0 | 1 | 157 | 1 | 157 | 7.24e-47 | 150 |
| MsG0280007916.01.T01 | MTR_4g120950 | 42.236 | 161 | 86 | 5 | 1 | 157 | 1 | 158 | 5.71e-32 | 112 |
| MsG0280007916.01.T01 | MTR_2g435310 | 32.051 | 156 | 105 | 1 | 1 | 155 | 1 | 156 | 6.96e-30 | 107 |
| MsG0280007916.01.T01 | MTR_4g120760 | 33.121 | 157 | 104 | 1 | 1 | 156 | 1 | 157 | 5.38e-29 | 104 |
| MsG0280007916.01.T01 | MTR_4g120760 | 33.121 | 157 | 104 | 1 | 1 | 156 | 1 | 157 | 5.38e-29 | 104 |
| MsG0280007916.01.T01 | MTR_4g120940 | 61.644 | 73 | 28 | 0 | 85 | 157 | 47 | 119 | 5.80e-24 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 42 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGGATAACTTCTTAA+TGG | 0.186795 | 2:-22878195 | None:intergenic |
| CTTCAACAATTTCAACAGTT+TGG | 0.243960 | 2:-22878154 | None:intergenic |
| GGATAACTTCTTAATGGTTC+CGG | 0.295277 | 2:-22878189 | None:intergenic |
| TTCAACAATTTCAACAGTTT+GGG | 0.345097 | 2:-22878153 | None:intergenic |
| TACAGCTTAGTAGGAGGAAC+AGG | 0.356588 | 2:+22878744 | MsG0280007916.01.T01:CDS |
| GTTGAAATTGTTGAAGGAAA+TGG | 0.360922 | 2:+22878161 | MsG0280007916.01.T01:CDS |
| GAAACTAAGGCCAGAGGAAC+TGG | 0.366866 | 2:+22878900 | MsG0280007916.01.T01:CDS |
| TGGGCAGCAGAAATCACCTT+TGG | 0.390043 | 2:-22878134 | None:intergenic |
| GATAACTTCTTAATGGTTCC+GGG | 0.390267 | 2:-22878188 | None:intergenic |
| AGAGCTTTGTAGAGTTTAGC+TGG | 0.394931 | 2:-22878086 | None:intergenic |
| TGCAGTAGATGAGGCAAACT+TGG | 0.396721 | 2:+22878713 | MsG0280007916.01.T01:CDS |
| CTTGATAAGTCCAGTTCCTC+TGG | 0.419380 | 2:-22878910 | None:intergenic |
| GGATACAACTACAGCTTAGT+AGG | 0.431725 | 2:+22878735 | MsG0280007916.01.T01:CDS |
| AGATAGAGCTGCATCACCTT+TGG | 0.442558 | 2:-22878862 | None:intergenic |
| CTCTTAATTACCTTCAACAA+TGG | 0.448029 | 2:-22878210 | None:intergenic |
| GGGCAGCAGAAATCACCTTT+GGG | 0.452332 | 2:-22878133 | None:intergenic |
| AAGAAGTTATCCATTGTTGA+AGG | 0.479062 | 2:+22878200 | MsG0280007916.01.T01:CDS |
| AAAATTGTGGCTGGCTCTGA+TGG | 0.498760 | 2:+22878804 | MsG0280007916.01.T01:CDS |
| CAAACTGTTGAAATTGTTGA+AGG | 0.498891 | 2:+22878155 | MsG0280007916.01.T01:CDS |
| TAATTTGTGTAGCACAAAGT+TGG | 0.501990 | 2:-22878688 | None:intergenic |
| CAGAGGAACTGGACTTATCA+AGG | 0.507213 | 2:+22878911 | MsG0280007916.01.T01:CDS |
| GGACTTATCAAGGCCATTGA+GGG | 0.514208 | 2:+22878921 | MsG0280007916.01.T01:CDS |
| TTTCACTGTAATCTTAGCAA+TGG | 0.523574 | 2:-22878832 | None:intergenic |
| CTCTGGCCTTAGTTTCATCA+CGG | 0.532674 | 2:-22878893 | None:intergenic |
| TGCAGTCCGTGATGAAACTA+AGG | 0.533307 | 2:+22878887 | MsG0280007916.01.T01:CDS |
| TGCCACGACGTAGCCCTCAA+TGG | 0.549026 | 2:-22878934 | None:intergenic |
| TGGACTTATCAAGGCCATTG+AGG | 0.572485 | 2:+22878920 | MsG0280007916.01.T01:CDS |
| CAAATTAGATGCAGTAGATG+AGG | 0.587202 | 2:+22878704 | MsG0280007916.01.T01:CDS |
| ATTGTGGCTGGCTCTGATGG+TGG | 0.588345 | 2:+22878807 | MsG0280007916.01.T01:CDS |
| GCAGTAGATGAGGCAAACTT+GGG | 0.598362 | 2:+22878714 | MsG0280007916.01.T01:CDS |
| GTTGAAGGAAATGGAGGACC+CGG | 0.599694 | 2:+22878170 | MsG0280007916.01.T01:CDS |
| GTAGAGTTTAGCTGGAGCCA+CGG | 0.602676 | 2:-22878078 | None:intergenic |
| TGCTGATGAAATCGTCCCAA+AGG | 0.606260 | 2:+22878118 | MsG0280007916.01.T01:CDS |
| CTTAGTAGGAGGAACAGGGT+TGG | 0.609437 | 2:+22878749 | MsG0280007916.01.T01:CDS |
| GAAATTGTTGAAGGAAATGG+AGG | 0.626795 | 2:+22878164 | MsG0280007916.01.T01:CDS |
| TACAACTACAGCTTAGTAGG+AGG | 0.637578 | 2:+22878738 | MsG0280007916.01.T01:CDS |
| GGCCATTGAGGGCTACGTCG+TGG | 0.646344 | 2:+22878932 | MsG0280007916.01.T01:CDS |
| GAGCTGCATCACCTTTGGTG+TGG | 0.654393 | 2:-22878857 | None:intergenic |
| ACAGTGAAATACCACACCAA+AGG | 0.661287 | 2:+22878846 | MsG0280007916.01.T01:CDS |
| CGTGATGAAACTAAGGCCAG+AGG | 0.688505 | 2:+22878894 | MsG0280007916.01.T01:CDS |
| TGATGAACATGTATCAACCG+TGG | 0.718349 | 2:+22878061 | MsG0280007916.01.T01:CDS |
| ACAGCTTAGTAGGAGGAACA+GGG | 0.723853 | 2:+22878745 | MsG0280007916.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATATAAATAATTATAA+TGG | + | Chr2:22878645-22878664 | MsG0280007916.01.T01:intron | 0.0% |
| !! | AAATAAGTTAAATTCATTAT+GGG | + | Chr2:22878438-22878457 | MsG0280007916.01.T01:intron | 10.0% |
| !!! | TTTGTCAATTTTTAAATAAA+AGG | - | Chr2:22878359-22878378 | None:intergenic | 10.0% |
| !! | AATAAGTTAAATTCATTATG+GGG | + | Chr2:22878439-22878458 | MsG0280007916.01.T01:intron | 15.0% |
| !! | CAAATAAGTTAAATTCATTA+TGG | + | Chr2:22878437-22878456 | MsG0280007916.01.T01:intron | 15.0% |
| !!! | GACTTTAAAAAAAATGATTC+AGG | + | Chr2:22878541-22878560 | MsG0280007916.01.T01:intron | 20.0% |
| ! | AACAATGGATAACTTCTTAA+TGG | - | Chr2:22878198-22878217 | None:intergenic | 25.0% |
| ! | ATAATTATTAGACATACCCA+TGG | - | Chr2:22878520-22878539 | None:intergenic | 25.0% |
| ! | ATGGGTATGTCTAATAATTA+TGG | + | Chr2:22878519-22878538 | MsG0280007916.01.T01:intron | 25.0% |
| ! | ATTACATCATTCATTTCTCA+TGG | - | Chr2:22878484-22878503 | None:intergenic | 25.0% |
| ! | TGAATTCGAAACAAAAATTG+TGG | + | Chr2:22878791-22878810 | MsG0280007916.01.T01:CDS | 25.0% |
| ! | TTCAACAATTTCAACAGTTT+GGG | - | Chr2:22878156-22878175 | None:intergenic | 25.0% |
| AAGAAGTTATCCATTGTTGA+AGG | + | Chr2:22878200-22878219 | MsG0280007916.01.T01:CDS | 30.0% | |
| CAAACTGTTGAAATTGTTGA+AGG | + | Chr2:22878155-22878174 | MsG0280007916.01.T01:CDS | 30.0% | |
| CTCTTAATTACCTTCAACAA+TGG | - | Chr2:22878213-22878232 | None:intergenic | 30.0% | |
| CTTCAACAATTTCAACAGTT+TGG | - | Chr2:22878157-22878176 | None:intergenic | 30.0% | |
| GTTGAAATTGTTGAAGGAAA+TGG | + | Chr2:22878161-22878180 | MsG0280007916.01.T01:CDS | 30.0% | |
| TATAATGGTTGTATTGCAGA+TGG | + | Chr2:22878660-22878679 | MsG0280007916.01.T01:intron | 30.0% | |
| TGGGGTATGTCTAATAATTA+TGG | + | Chr2:22878457-22878476 | MsG0280007916.01.T01:intron | 30.0% | |
| TTTCACTGTAATCTTAGCAA+TGG | - | Chr2:22878835-22878854 | None:intergenic | 30.0% | |
| ! | TAATTTGTGTAGCACAAAGT+TGG | - | Chr2:22878691-22878710 | None:intergenic | 30.0% |
| !! | AAGATCGATTTGAACTTTAC+CGG | - | Chr2:22878580-22878599 | None:intergenic | 30.0% |
| AATACATAAGCTCGTTCCAT+GGG | + | Chr2:22878501-22878520 | MsG0280007916.01.T01:intron | 35.0% | |
| CAAATTAGATGCAGTAGATG+AGG | + | Chr2:22878704-22878723 | MsG0280007916.01.T01:CDS | 35.0% | |
| GAAATTGTTGAAGGAAATGG+AGG | + | Chr2:22878164-22878183 | MsG0280007916.01.T01:CDS | 35.0% | |
| GATAACTTCTTAATGGTTCC+GGG | - | Chr2:22878191-22878210 | None:intergenic | 35.0% | |
| GGATAACTTCTTAATGGTTC+CGG | - | Chr2:22878192-22878211 | None:intergenic | 35.0% | |
| TAATACATAAGCTCGTTCCA+TGG | + | Chr2:22878500-22878519 | MsG0280007916.01.T01:intron | 35.0% | |
| TTCAGGTGATTAATGATACC+CGG | + | Chr2:22878558-22878577 | MsG0280007916.01.T01:intron | 35.0% | |
| TTCGAAACAAAAATTGTGGC+TGG | + | Chr2:22878795-22878814 | MsG0280007916.01.T01:CDS | 35.0% | |
| ! | TACACAATTCTTTGTTGTGC+TGG | - | Chr2:22878332-22878351 | None:intergenic | 35.0% |
| !! | AGATCGATTTGAACTTTACC+GGG | - | Chr2:22878579-22878598 | None:intergenic | 35.0% |
| ACAGTGAAATACCACACCAA+AGG | + | Chr2:22878846-22878865 | MsG0280007916.01.T01:CDS | 40.0% | |
| GGATACAACTACAGCTTAGT+AGG | + | Chr2:22878735-22878754 | MsG0280007916.01.T01:CDS | 40.0% | |
| TACAACTACAGCTTAGTAGG+AGG | + | Chr2:22878738-22878757 | MsG0280007916.01.T01:CDS | 40.0% | |
| TGATGAACATGTATCAACCG+TGG | + | Chr2:22878061-22878080 | MsG0280007916.01.T01:CDS | 40.0% | |
| ! | AGAGCTTTGTAGAGTTTAGC+TGG | - | Chr2:22878089-22878108 | None:intergenic | 40.0% |
| ACAGCTTAGTAGGAGGAACA+GGG | + | Chr2:22878745-22878764 | MsG0280007916.01.T01:CDS | 45.0% | |
| AGATAGAGCTGCATCACCTT+TGG | - | Chr2:22878865-22878884 | None:intergenic | 45.0% | |
| CAGAGGAACTGGACTTATCA+AGG | + | Chr2:22878911-22878930 | MsG0280007916.01.T01:CDS | 45.0% | |
| CTTGATAAGTCCAGTTCCTC+TGG | - | Chr2:22878913-22878932 | None:intergenic | 45.0% | |
| GCAGTAGATGAGGCAAACTT+GGG | + | Chr2:22878714-22878733 | MsG0280007916.01.T01:CDS | 45.0% | |
| GGACTTATCAAGGCCATTGA+GGG | + | Chr2:22878921-22878940 | MsG0280007916.01.T01:CDS | 45.0% | |
| GGCGAACTTTGATCAGTTGT+CGG | - | Chr2:22878311-22878330 | None:intergenic | 45.0% | |
| TACAGCTTAGTAGGAGGAAC+AGG | + | Chr2:22878744-22878763 | MsG0280007916.01.T01:CDS | 45.0% | |
| TGCAGTAGATGAGGCAAACT+TGG | + | Chr2:22878713-22878732 | MsG0280007916.01.T01:CDS | 45.0% | |
| TGCAGTCCGTGATGAAACTA+AGG | + | Chr2:22878887-22878906 | MsG0280007916.01.T01:CDS | 45.0% | |
| TGCTGATGAAATCGTCCCAA+AGG | + | Chr2:22878118-22878137 | MsG0280007916.01.T01:CDS | 45.0% | |
| TGGACTTATCAAGGCCATTG+AGG | + | Chr2:22878920-22878939 | MsG0280007916.01.T01:CDS | 45.0% | |
| !! | AAAATTGTGGCTGGCTCTGA+TGG | + | Chr2:22878804-22878823 | MsG0280007916.01.T01:CDS | 45.0% |
| !! | CTCTGGCCTTAGTTTCATCA+CGG | - | Chr2:22878896-22878915 | None:intergenic | 45.0% |
| CGTGATGAAACTAAGGCCAG+AGG | + | Chr2:22878894-22878913 | MsG0280007916.01.T01:CDS | 50.0% | |
| CTTAGTAGGAGGAACAGGGT+TGG | + | Chr2:22878749-22878768 | MsG0280007916.01.T01:CDS | 50.0% | |
| GAAACTAAGGCCAGAGGAAC+TGG | + | Chr2:22878900-22878919 | MsG0280007916.01.T01:CDS | 50.0% | |
| GGGCAGCAGAAATCACCTTT+GGG | - | Chr2:22878136-22878155 | None:intergenic | 50.0% | |
| GTAGAGTTTAGCTGGAGCCA+CGG | - | Chr2:22878081-22878100 | None:intergenic | 50.0% | |
| GTTGAAGGAAATGGAGGACC+CGG | + | Chr2:22878170-22878189 | MsG0280007916.01.T01:CDS | 50.0% | |
| TGGGCAGCAGAAATCACCTT+TGG | - | Chr2:22878137-22878156 | None:intergenic | 50.0% | |
| GAGCTGCATCACCTTTGGTG+TGG | - | Chr2:22878860-22878879 | None:intergenic | 55.0% | |
| !! | ATTGTGGCTGGCTCTGATGG+TGG | + | Chr2:22878807-22878826 | MsG0280007916.01.T01:CDS | 55.0% |
| TGCCACGACGTAGCCCTCAA+TGG | - | Chr2:22878937-22878956 | None:intergenic | 60.0% | |
| GGCCATTGAGGGCTACGTCG+TGG | + | Chr2:22878932-22878951 | MsG0280007916.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 22878041 | 22878971 | 22878041 | ID=MsG0280007916.01;Name=MsG0280007916.01 |
| Chr2 | mRNA | 22878041 | 22878971 | 22878041 | ID=MsG0280007916.01.T01;Parent=MsG0280007916.01;Name=MsG0280007916.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|157 |
| Chr2 | exon | 22878041 | 22878221 | 22878041 | ID=MsG0280007916.01.T01:exon:13890;Parent=MsG0280007916.01.T01 |
| Chr2 | exon | 22878679 | 22878971 | 22878679 | ID=MsG0280007916.01.T01:exon:13891;Parent=MsG0280007916.01.T01 |
| Chr2 | CDS | 22878041 | 22878221 | 22878041 | ID=MsG0280007916.01.T01:cds;Parent=MsG0280007916.01.T01 |
| Chr2 | CDS | 22878679 | 22878971 | 22878679 | ID=MsG0280007916.01.T01:cds;Parent=MsG0280007916.01.T01 |
| Gene Sequence |
| Protein sequence |
