Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045441.01.T01 | XP_013446279.1 | 99.359 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 0 | 633 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045441.01.T01 | P52581 | 77.885 | 312 | 69 | 0 | 1 | 312 | 1 | 312 | 0 | 508 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045441.01.T01 | A0A072TT01 | 99.359 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 0.0 | 633 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048345.01 | MsG0880045441.01 | 0.869836 | 2.296013e-66 | 8.740187e-63 |
| MsG0080048347.01 | MsG0880045441.01 | 0.826660 | 2.401133e-54 | 2.266129e-51 |
| MsG0080048348.01 | MsG0880045441.01 | 0.857731 | 1.336606e-62 | 3.331530e-59 |
| MsG0080048349.01 | MsG0880045441.01 | 0.846990 | 1.534556e-59 | 2.688518e-56 |
| MsG0080048350.01 | MsG0880045441.01 | 0.840685 | 7.491244e-58 | 1.075294e-54 |
| MsG0080048352.01 | MsG0880045441.01 | 0.840018 | 1.119447e-57 | 1.574163e-54 |
| MsG0180000019.01 | MsG0880045441.01 | 0.868942 | 4.487632e-66 | 1.653334e-62 |
| MsG0180000337.01 | MsG0880045441.01 | 0.859420 | 4.187933e-63 | 1.105414e-59 |
| MsG0180001050.01 | MsG0880045441.01 | 0.848472 | 5.999018e-60 | 1.102281e-56 |
| MsG0180001053.01 | MsG0880045441.01 | 0.805583 | 1.244873e-49 | 6.610563e-47 |
| MsG0880044669.01 | MsG0880045441.01 | 0.818532 | 1.865877e-52 | 1.400357e-49 |
| MsG0880045272.01 | MsG0880045441.01 | 0.814458 | 1.524690e-51 | 1.023629e-48 |
| MsG0880045277.01 | MsG0880045441.01 | 0.829486 | 5.012480e-55 | 5.137160e-52 |
| MsG0880045441.01 | MsG0880045677.01 | 0.803066 | 4.162724e-49 | 2.071857e-46 |
| MsG0880045441.01 | MsG0880045683.01 | 0.835700 | 1.440203e-56 | 1.775176e-53 |
| MsG0880045441.01 | MsG0880046642.01 | 0.802774 | 4.781905e-49 | 2.362682e-46 |
| MsG0880045441.01 | MsG0880046996.01 | 0.846861 | 1.664550e-59 | 2.904304e-56 |
| MsG0880045441.01 | MsG0880047081.01 | 0.856593 | 2.897344e-62 | 6.951428e-59 |
| MsG0880045441.01 | MsG0880047486.01 | 0.816464 | 5.454968e-52 | 3.867911e-49 |
| MsG0880045441.01 | MsG0880047491.01 | 0.836071 | 1.159693e-56 | 1.445452e-53 |
| MsG0180003830.01 | MsG0880045441.01 | 0.829162 | 6.004931e-55 | 6.096706e-52 |
| MsG0180004110.01 | MsG0880045441.01 | 0.837558 | 4.841845e-57 | 6.312763e-54 |
| MsG0180004154.01 | MsG0880045441.01 | 0.808898 | 2.469314e-50 | 1.428958e-47 |
| MsG0180004266.01 | MsG0880045441.01 | 0.827053 | 1.934297e-54 | 1.846448e-51 |
| MsG0180004562.01 | MsG0880045441.01 | 0.850768 | 1.371614e-60 | 2.715947e-57 |
| MsG0180004752.01 | MsG0880045441.01 | 0.822993 | 1.759385e-53 | 1.496022e-50 |
| MsG0180004941.01 | MsG0880045441.01 | 0.880225 | 6.540062e-70 | 3.654510e-66 |
| MsG0180005328.01 | MsG0880045441.01 | 0.822113 | 2.818066e-53 | 2.336850e-50 |
| MsG0180005356.01 | MsG0880045441.01 | 0.850646 | 1.484714e-60 | 2.928171e-57 |
| MsG0180005357.01 | MsG0880045441.01 | 0.865707 | 4.857078e-65 | 1.595527e-61 |
| MsG0180005358.01 | MsG0880045441.01 | 0.854598 | 1.106458e-61 | 2.484240e-58 |
| MsG0180006047.01 | MsG0880045441.01 | 0.821106 | 4.816661e-53 | 3.882797e-50 |
| MsG0780040480.01 | MsG0880045441.01 | 0.804988 | 1.658572e-49 | 8.673836e-47 |
| MsG0780041198.01 | MsG0880045441.01 | 0.801172 | 1.020613e-48 | 4.841536e-46 |
| MsG0780041316.01 | MsG0880045441.01 | 0.803492 | 3.397980e-49 | 1.709942e-46 |
| MsG0780041556.01 | MsG0880045441.01 | 0.894974 | 1.487030e-75 | 1.512566e-71 |
| MsG0880041985.01 | MsG0880045441.01 | 0.816870 | 4.424853e-52 | 3.172842e-49 |
| MsG0880042320.01 | MsG0880045441.01 | 0.822665 | 2.097913e-53 | 1.767371e-50 |
| MsG0880042368.01 | MsG0880045441.01 | 0.831196 | 1.914576e-55 | 2.062702e-52 |
| MsG0880042976.01 | MsG0880045441.01 | 0.809431 | 1.898398e-50 | 1.114423e-47 |
| MsG0880043094.01 | MsG0880045441.01 | 0.810532 | 1.100286e-50 | 6.648659e-48 |
| MsG0880043185.01 | MsG0880045441.01 | 0.814196 | 1.742730e-51 | 1.161679e-48 |
| MsG0880043285.01 | MsG0880045441.01 | 0.806205 | 9.212047e-50 | 4.970643e-47 |
| MsG0880043744.01 | MsG0880045441.01 | 0.844567 | 6.979299e-59 | 1.131419e-55 |
| MsG0880043824.01 | MsG0880045441.01 | 0.802701 | 4.950415e-49 | 2.441345e-46 |
| MsG0880043828.01 | MsG0880045441.01 | 0.845974 | 2.905035e-59 | 4.926297e-56 |
| MsG0280011041.01 | MsG0880045441.01 | 0.808932 | 2.428291e-50 | 1.406512e-47 |
| MsG0280011042.01 | MsG0880045441.01 | 0.827566 | 1.457922e-54 | 1.412629e-51 |
| MsG0280011053.01 | MsG0880045441.01 | 0.855369 | 6.605996e-62 | 1.521882e-58 |
| MsG0280011165.01 | MsG0880045441.01 | 0.811000 | 8.710715e-51 | 5.330758e-48 |
| MsG0280011193.01 | MsG0880045441.01 | 0.809159 | 2.172042e-50 | 1.265829e-47 |
| MsG0280011203.01 | MsG0880045441.01 | 0.811008 | 8.677245e-51 | 5.311316e-48 |
| MsG0280011350.01 | MsG0880045441.01 | 0.806063 | 9.864756e-50 | 5.303528e-47 |
| MsG0380011613.01 | MsG0880045441.01 | 0.847838 | 8.976007e-60 | 1.615856e-56 |
| MsG0380012400.01 | MsG0880045441.01 | 0.807084 | 6.007827e-50 | 3.315482e-47 |
| MsG0380013300.01 | MsG0880045441.01 | 0.857376 | 1.702274e-62 | 4.192685e-59 |
| MsG0380013449.01 | MsG0880045441.01 | 0.817205 | 3.721268e-52 | 2.692702e-49 |
| MsG0380013452.01 | MsG0880045441.01 | 0.818287 | 2.120259e-52 | 1.580472e-49 |
| MsG0380013458.01 | MsG0880045441.01 | 0.816698 | 4.836066e-52 | 3.451120e-49 |
| MsG0380014920.01 | MsG0880045441.01 | 0.838666 | 2.510690e-57 | 3.386371e-54 |
| MsG0680031429.01 | MsG0880045441.01 | 0.859407 | 4.225508e-63 | 1.114947e-59 |
| MsG0680035496.01 | MsG0880045441.01 | 0.827001 | 1.991228e-54 | 1.897891e-51 |
| MsG0480018500.01 | MsG0880045441.01 | 0.806213 | 9.175479e-50 | 4.951906e-47 |
| MsG0480018904.01 | MsG0880045441.01 | 0.851123 | 1.089369e-60 | 2.182525e-57 |
| MsG0480019295.01 | MsG0880045441.01 | 0.874396 | 6.979412e-68 | 3.136910e-64 |
| MsG0480020428.01 | MsG0880045441.01 | 0.831183 | 1.929110e-55 | 2.077511e-52 |
| MsG0480020444.01 | MsG0880045441.01 | 0.804313 | 2.293300e-49 | 1.178654e-46 |
| MsG0480020784.01 | MsG0880045441.01 | 0.811073 | 8.399288e-51 | 5.149507e-48 |
| MsG0480021135.01 | MsG0880045441.01 | 0.813096 | 3.043289e-51 | 1.968837e-48 |
| MsG0480022125.01 | MsG0880045441.01 | 0.884357 | 2.055615e-71 | 1.351904e-67 |
| MsG0480022152.01 | MsG0880045441.01 | 0.812583 | 3.941157e-51 | 2.515481e-48 |
| MsG0480022655.01 | MsG0880045441.01 | 0.825129 | 5.546362e-54 | 5.011351e-51 |
| MsG0480022671.01 | MsG0880045441.01 | 0.824299 | 8.702085e-54 | 7.676778e-51 |
| MsG0480022736.01 | MsG0880045441.01 | 0.820858 | 5.493491e-53 | 4.397957e-50 |
| MsG0480023107.01 | MsG0880045441.01 | 0.829461 | 5.080533e-55 | 5.203336e-52 |
| MsG0480023318.01 | MsG0880045441.01 | 0.806385 | 8.441924e-50 | 4.575666e-47 |
| MsG0480023819.01 | MsG0880045441.01 | 0.842155 | 3.072971e-58 | 4.617866e-55 |
| MsG0480023947.01 | MsG0880045441.01 | 0.840280 | 9.560663e-58 | 1.355145e-54 |
| MsG0580024154.01 | MsG0880045441.01 | 0.809088 | 2.249465e-50 | 1.308440e-47 |
| MsG0580024218.01 | MsG0880045441.01 | 0.801574 | 8.443739e-49 | 4.046296e-46 |
| MsG0580024260.01 | MsG0880045441.01 | 0.822058 | 2.901827e-53 | 2.402478e-50 |
| MsG0580024407.01 | MsG0880045441.01 | 0.807530 | 4.832347e-50 | 2.698013e-47 |
| MsG0580024575.01 | MsG0880045441.01 | 0.808638 | 2.806567e-50 | 1.613076e-47 |
| MsG0580024871.01 | MsG0880045441.01 | 0.831033 | 2.098839e-55 | 2.250333e-52 |
| MsG0580024999.01 | MsG0880045441.01 | 0.802807 | 4.707708e-49 | 2.328005e-46 |
| MsG0580025338.01 | MsG0880045441.01 | 0.803356 | 3.625257e-49 | 1.817841e-46 |
| MsG0580025683.01 | MsG0880045441.01 | 0.811832 | 5.746724e-51 | 3.594482e-48 |
| MsG0380015009.01 | MsG0880045441.01 | 0.825519 | 4.485561e-54 | 4.097846e-51 |
| MsG0380015010.01 | MsG0880045441.01 | 0.859944 | 2.912614e-63 | 7.827931e-60 |
| MsG0380017101.01 | MsG0880045441.01 | 0.809050 | 2.292072e-50 | 1.331851e-47 |
| MsG0380017690.01 | MsG0880045441.01 | 0.819592 | 1.071425e-52 | 8.280434e-50 |
| MsG0380018051.01 | MsG0880045441.01 | 0.810616 | 1.054910e-50 | 6.389166e-48 |
| MsG0580026095.01 | MsG0880045441.01 | 0.803036 | 4.222865e-49 | 2.100238e-46 |
| MsG0580027073.01 | MsG0880045441.01 | 0.805994 | 1.020211e-49 | 5.475310e-47 |
| MsG0580027227.01 | MsG0880045441.01 | 0.808037 | 3.770220e-50 | 2.133022e-47 |
| MsG0580027733.01 | MsG0880045441.01 | 0.849537 | 3.034147e-60 | 5.769764e-57 |
| MsG0580028355.01 | MsG0880045441.01 | 0.835175 | 1.955433e-56 | 2.372396e-53 |
| MsG0580028999.01 | MsG0880045441.01 | 0.895684 | 7.581823e-76 | 7.947225e-72 |
| MsG0580029583.01 | MsG0880045441.01 | 0.846463 | 2.137487e-59 | 3.682576e-56 |
| MsG0580029930.01 | MsG0880045441.01 | 0.849916 | 2.378653e-60 | 4.580698e-57 |
| MsG0580030133.01 | MsG0880045441.01 | 0.859380 | 4.306365e-63 | 1.135172e-59 |
| MsG0580030135.01 | MsG0880045441.01 | 0.811462 | 6.917146e-51 | 4.284528e-48 |
| MsG0280006883.01 | MsG0880045441.01 | 0.834169 | 3.501881e-56 | 4.121802e-53 |
| MsG0280006974.01 | MsG0880045441.01 | 0.800494 | 1.403520e-48 | 6.544550e-46 |
| MsG0280007369.01 | MsG0880045441.01 | 0.840021 | 1.117170e-57 | 1.571134e-54 |
| MsG0280007391.01 | MsG0880045441.01 | 0.837211 | 5.941921e-57 | 7.664133e-54 |
| MsG0280007916.01 | MsG0880045441.01 | 0.827113 | 1.871278e-54 | 1.789454e-51 |
| MsG0280008405.01 | MsG0880045441.01 | 0.849731 | 2.678272e-60 | 5.125776e-57 |
| MsG0280009394.01 | MsG0880045441.01 | 0.839735 | 1.326104e-57 | 1.848036e-54 |
| MsG0680035741.01 | MsG0880045441.01 | 0.841847 | 3.707323e-58 | 5.517406e-55 |
| MsG0680035779.01 | MsG0880045441.01 | 0.802356 | 5.832281e-49 | 2.851147e-46 |
| MsG0780036661.01 | MsG0880045441.01 | 0.837652 | 4.579638e-57 | 5.989046e-54 |
| MsG0780038123.01 | MsG0880045441.01 | 0.872516 | 2.995821e-67 | 1.257473e-63 |
| MsG0780038515.01 | MsG0880045441.01 | 0.804931 | 1.704049e-49 | 8.899322e-47 |
| MsG0780038755.01 | MsG0880045441.01 | 0.856410 | 3.278142e-62 | 7.817353e-59 |
| MsG0780038923.01 | MsG0880045441.01 | 0.806862 | 6.694012e-50 | 3.673163e-47 |
| MsG0780038924.01 | MsG0880045441.01 | 0.809688 | 1.672160e-50 | 9.883450e-48 |
| MsG0780038925.01 | MsG0880045441.01 | 0.828850 | 7.148285e-55 | 7.190003e-52 |
| MsG0780039190.01 | MsG0880045441.01 | 0.806795 | 6.915542e-50 | 3.788050e-47 |
| MsG0780039250.01 | MsG0880045441.01 | 0.804216 | 2.402396e-49 | 1.231614e-46 |
| MsG0780039472.01 | MsG0880045441.01 | 0.845817 | 3.205437e-59 | 5.408273e-56 |
| MsG0780039576.01 | MsG0880045441.01 | 0.804429 | 2.169229e-49 | 1.118175e-46 |
| MsG0780039877.01 | MsG0880045441.01 | 0.865077 | 7.667337e-65 | 2.463091e-61 |
| MsG0780039978.01 | MsG0880045441.01 | 0.827204 | 1.780223e-54 | 1.707049e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045441.01.T01 | MTR_8g071130 | 99.359 | 312 | 2 | 0 | 1 | 312 | 1 | 312 | 0.0 | 633 |
| MsG0880045441.01.T01 | MTR_5g027240 | 75.241 | 311 | 76 | 1 | 1 | 311 | 1 | 310 | 2.96e-179 | 497 |
| MsG0880045441.01.T01 | MTR_5g027290 | 75.884 | 311 | 74 | 1 | 1 | 311 | 1 | 310 | 3.65e-179 | 497 |
| MsG0880045441.01.T01 | MTR_5g020740 | 48.726 | 314 | 150 | 5 | 2 | 312 | 4 | 309 | 8.42e-96 | 286 |
| MsG0880045441.01.T01 | MTR_3g116840 | 48.710 | 310 | 152 | 4 | 4 | 312 | 9 | 312 | 1.48e-95 | 285 |
| MsG0880045441.01.T01 | MTR_3g111990 | 47.588 | 311 | 156 | 3 | 3 | 312 | 4 | 308 | 2.93e-94 | 282 |
| MsG0880045441.01.T01 | MTR_3g111980 | 46.178 | 314 | 160 | 4 | 2 | 312 | 3 | 310 | 1.21e-92 | 278 |
| MsG0880045441.01.T01 | MTR_4g070370 | 43.226 | 310 | 169 | 3 | 1 | 309 | 5 | 308 | 1.53e-82 | 253 |
| MsG0880045441.01.T01 | MTR_4g070340 | 42.671 | 307 | 169 | 3 | 4 | 309 | 7 | 307 | 1.27e-78 | 243 |
| MsG0880045441.01.T01 | MTR_5g020760 | 40.432 | 324 | 170 | 8 | 3 | 312 | 4 | 318 | 1.52e-73 | 229 |
| MsG0880045441.01.T01 | MTR_5g020800 | 40.432 | 324 | 170 | 8 | 3 | 312 | 4 | 318 | 1.57e-73 | 229 |
| MsG0880045441.01.T01 | MTR_4g070340 | 41.368 | 307 | 168 | 4 | 4 | 309 | 7 | 302 | 3.43e-73 | 228 |
| MsG0880045441.01.T01 | MTR_4g070360 | 39.677 | 310 | 180 | 3 | 1 | 308 | 1 | 305 | 6.67e-73 | 227 |
| MsG0880045441.01.T01 | MTR_3g008100 | 42.020 | 307 | 167 | 6 | 3 | 308 | 5 | 301 | 7.39e-71 | 222 |
| MsG0880045441.01.T01 | MTR_3g008100 | 41.694 | 307 | 161 | 6 | 3 | 308 | 5 | 294 | 9.86e-69 | 216 |
| MsG0880045441.01.T01 | MTR_5g020760 | 42.537 | 268 | 137 | 5 | 3 | 259 | 4 | 265 | 2.53e-68 | 214 |
| MsG0880045441.01.T01 | MTR_3g008140 | 40.584 | 308 | 171 | 7 | 2 | 308 | 4 | 300 | 1.36e-66 | 211 |
| MsG0880045441.01.T01 | MTR_4g070340 | 44.715 | 246 | 129 | 3 | 65 | 309 | 19 | 258 | 4.77e-65 | 206 |
| MsG0880045441.01.T01 | MTR_3g007970 | 38.762 | 307 | 177 | 6 | 3 | 308 | 5 | 301 | 9.71e-65 | 206 |
| MsG0880045441.01.T01 | MTR_1g093720 | 35.127 | 316 | 193 | 6 | 1 | 312 | 11 | 318 | 1.56e-56 | 186 |
| MsG0880045441.01.T01 | MTR_3g008100 | 44.311 | 167 | 85 | 4 | 3 | 168 | 5 | 164 | 5.86e-36 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045441.01.T01 | AT1G32100 | 65.916 | 311 | 105 | 1 | 2 | 312 | 8 | 317 | 7.97e-156 | 438 |
| MsG0880045441.01.T01 | AT4G13660 | 64.309 | 311 | 110 | 1 | 2 | 312 | 8 | 317 | 1.47e-152 | 430 |
| MsG0880045441.01.T01 | AT4G13660 | 64.309 | 311 | 110 | 1 | 2 | 312 | 8 | 317 | 1.47e-152 | 430 |
| MsG0880045441.01.T01 | AT1G75280 | 46.326 | 313 | 158 | 5 | 2 | 311 | 4 | 309 | 2.76e-89 | 269 |
| MsG0880045441.01.T01 | AT1G75290 | 45.048 | 313 | 163 | 4 | 2 | 311 | 4 | 310 | 2.21e-88 | 267 |
| MsG0880045441.01.T01 | AT4G39230 | 45.687 | 313 | 161 | 4 | 2 | 312 | 3 | 308 | 3.20e-88 | 266 |
| MsG0880045441.01.T01 | AT1G75290 | 45.048 | 313 | 163 | 4 | 2 | 311 | 31 | 337 | 8.88e-88 | 266 |
| MsG0880045441.01.T01 | AT1G75300 | 45.370 | 324 | 151 | 5 | 2 | 308 | 4 | 318 | 2.17e-82 | 252 |
| MsG0880045441.01.T01 | AT1G19540 | 44.551 | 312 | 166 | 4 | 4 | 312 | 3 | 310 | 1.46e-80 | 247 |
| MsG0880045441.01.T01 | AT1G19540 | 46.899 | 258 | 131 | 3 | 4 | 259 | 3 | 256 | 3.14e-70 | 219 |
| MsG0880045441.01.T01 | AT4G34540 | 39.935 | 308 | 173 | 4 | 2 | 308 | 6 | 302 | 4.74e-69 | 217 |
Find 85 sgRNAs with CRISPR-Local
Find 122 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTTTCTTGCCTTCGGAATT+TGG | 0.140897 | 8:-59183464 | MsG0880045441.01.T01:CDS |
| AAGGAGAGCTTATTGGAATT+TGG | 0.172480 | 8:-59182973 | MsG0880045441.01.T01:CDS |
| TGCAGACAGCGGTTATAATT+TGG | 0.172900 | 8:-59182404 | MsG0880045441.01.T01:three_prime_UTR |
| GGAATTTGGGAGAAACTTAT+TGG | 0.188551 | 8:-59182959 | MsG0880045441.01.T01:CDS |
| TGTTTGACAAACTTTGAAAT+AGG | 0.209168 | 8:-59182680 | MsG0880045441.01.T01:CDS |
| TCATCAAATGTTACCCTTCC+TGG | 0.228852 | 8:+59183407 | None:intergenic |
| CTCTCCCAAGGAGAGCTTAT+TGG | 0.238246 | 8:-59182980 | MsG0880045441.01.T01:CDS |
| AGAGACAAGGTTCATCTCTT+TGG | 0.275371 | 8:-59183263 | MsG0880045441.01.T01:CDS |
| GTTTGACAAACTTTGAAATA+GGG | 0.285880 | 8:-59182679 | MsG0880045441.01.T01:CDS |
| AATATTACCAGCTTCTTTGA+TGG | 0.297662 | 8:+59184035 | None:intergenic |
| CAAAGAAGCTGGTAATATTA+AGG | 0.300858 | 8:-59184031 | MsG0880045441.01.T01:intron |
| AATGCATGTCCCATTCTTGC+TGG | 0.305536 | 8:+59183434 | None:intergenic |
| AGGAGAGCTTATTGGAATTT+GGG | 0.315376 | 8:-59182972 | MsG0880045441.01.T01:CDS |
| CTATATCTGGTGTTCATATT+AGG | 0.315932 | 8:-59184095 | MsG0880045441.01.T01:CDS |
| CTCTTTGCTGGATACTTTGC+TGG | 0.318255 | 8:-59183320 | MsG0880045441.01.T01:CDS |
| GTTAAAATTACCTTACCATT+AGG | 0.319955 | 8:-59182523 | MsG0880045441.01.T01:three_prime_UTR |
| ATCTCTGCTAACCTCTTTGC+TGG | 0.361971 | 8:-59183332 | MsG0880045441.01.T01:CDS |
| GGTAACATTTGATGACAAAA+TGG | 0.366837 | 8:-59183399 | MsG0880045441.01.T01:CDS |
| TGCTGGAAGCCTCTCTCAGA+TGG | 0.390000 | 8:-59183303 | MsG0880045441.01.T01:CDS |
| ACACTAGCGTTTCTTGCCTT+CGG | 0.397251 | 8:-59183471 | MsG0880045441.01.T01:intron |
| TTTGGAGATGGAAAACATAA+AGG | 0.410931 | 8:-59183245 | MsG0880045441.01.T01:intron |
| TATAAACTTCAAGTAGCAAT+TGG | 0.419438 | 8:-59182731 | MsG0880045441.01.T01:CDS |
| GTTCTAGTAGTGGGAGGAAC+AGG | 0.429745 | 8:-59184324 | MsG0880045441.01.T01:CDS |
| CATTTAATATCTGAAATATC+CGG | 0.437578 | 8:+59182467 | None:intergenic |
| TAGTTCAATTGGGAATAAAC+CGG | 0.438436 | 8:-59182486 | MsG0880045441.01.T01:three_prime_UTR |
| AAAAGCACAAAATCTCCTAA+TGG | 0.439379 | 8:+59182508 | None:intergenic |
| TGTTACCTTTCAATGTTGTA+AGG | 0.444547 | 8:+59182897 | None:intergenic |
| TGGCCTAGACCCAGCAAGAA+TGG | 0.445117 | 8:-59183444 | MsG0880045441.01.T01:CDS |
| CATATTAGGAGTCATAGTAT+TGG | 0.455402 | 8:-59184081 | MsG0880045441.01.T01:CDS |
| AGCAAGAATGGGACATGCAT+TGG | 0.455560 | 8:-59183432 | MsG0880045441.01.T01:CDS |
| GTCCCATTCTTGCTGGGTCT+AGG | 0.460549 | 8:+59183441 | None:intergenic |
| AACTTTGAAATAGGGGAAGA+TGG | 0.469119 | 8:-59182671 | MsG0880045441.01.T01:CDS |
| AAATTCCAATAAGCTCTCCT+TGG | 0.474182 | 8:+59182975 | None:intergenic |
| ATGCATGTCCCATTCTTGCT+GGG | 0.478003 | 8:+59183435 | None:intergenic |
| ATGCGTGTGTAATTCACCTC+AGG | 0.480231 | 8:+59182626 | None:intergenic |
| CACAAAATCTCCTAATGGTA+AGG | 0.483152 | 8:+59182513 | None:intergenic |
| TCAAGCACAGACATGTTTGT+TGG | 0.484878 | 8:-59182545 | MsG0880045441.01.T01:three_prime_UTR |
| GTTGTCATCAGTGCTATATC+TGG | 0.487092 | 8:-59184108 | MsG0880045441.01.T01:CDS |
| TTCAAATTGAGAAGATTCAA+AGG | 0.491021 | 8:-59184221 | MsG0880045441.01.T01:CDS |
| TCAATTTGAAGTCCCAACTC+TGG | 0.493933 | 8:+59184234 | None:intergenic |
| TTGATGACAAAATGGCTGTA+AGG | 0.494907 | 8:-59183391 | MsG0880045441.01.T01:CDS |
| ATGGGACATGCATTGGAGCC+AGG | 0.496170 | 8:-59183425 | MsG0880045441.01.T01:CDS |
| GCTGGAAGCCTCTCTCAGAT+GGG | 0.496185 | 8:-59183302 | MsG0880045441.01.T01:CDS |
| CTTCTTTCATTCAAGAAACA+AGG | 0.497102 | 8:-59184198 | MsG0880045441.01.T01:CDS |
| GTGGGAGGAACAGGATACAT+AGG | 0.497938 | 8:-59184315 | MsG0880045441.01.T01:CDS |
| GGCCTAGACCCAGCAAGAAT+GGG | 0.499805 | 8:-59183443 | MsG0880045441.01.T01:CDS |
| AAGGTTCATCTCTTTGGAGA+TGG | 0.505407 | 8:-59183257 | MsG0880045441.01.T01:CDS |
| GAAACTTATTGGAAAAGAGC+TGG | 0.507171 | 8:-59182948 | MsG0880045441.01.T01:CDS |
| TTTGACAAACTTTGAAATAG+GGG | 0.526655 | 8:-59182678 | MsG0880045441.01.T01:CDS |
| TGTGATTCAAAGGCCAGAGT+TGG | 0.529026 | 8:-59184247 | MsG0880045441.01.T01:CDS |
| AAGAGCAAGGTTCTAGTAGT+GGG | 0.529398 | 8:-59184333 | MsG0880045441.01.T01:CDS |
| GTGATTCAAAGGCCAGAGTT+GGG | 0.530457 | 8:-59184246 | MsG0880045441.01.T01:CDS |
| GGCTTCCTTACAACATTGAA+AGG | 0.541729 | 8:-59182902 | MsG0880045441.01.T01:intron |
| AATACTTCCACGTGAGGTAG+TGG | 0.545465 | 8:-59182569 | MsG0880045441.01.T01:three_prime_UTR |
| ATGAAACCTATGTGATTCAA+AGG | 0.548412 | 8:-59184257 | MsG0880045441.01.T01:CDS |
| AAGAGATGAACCTTGTCTCT+AGG | 0.549631 | 8:+59183266 | None:intergenic |
| ATTCACCTCAGGGTAAAGCT+TGG | 0.558374 | 8:+59182637 | None:intergenic |
| AATTCCAATAAGCTCTCCTT+GGG | 0.559132 | 8:+59182976 | None:intergenic |
| AAAGAGCAAGGTTCTAGTAG+TGG | 0.560042 | 8:-59184334 | MsG0880045441.01.T01:CDS |
| GTTGATGCCATCAAAGAAGC+TGG | 0.562038 | 8:-59184042 | MsG0880045441.01.T01:CDS |
| TTAGCAGAGATGTAAGTGAA+AGG | 0.563391 | 8:+59183344 | None:intergenic |
| GACATGCATTGGAGCCAGGA+AGG | 0.564748 | 8:-59183421 | MsG0880045441.01.T01:CDS |
| TCTTGTTGATGCTATCAAGA+AGG | 0.568801 | 8:-59184136 | MsG0880045441.01.T01:CDS |
| AATGTTGTAAGGAAGCCCTC+AGG | 0.573144 | 8:+59182908 | None:intergenic |
| AGAGAAAATGGAAAAGAGCA+AGG | 0.586777 | 8:-59184346 | MsG0880045441.01.T01:exon |
| TGAGGTGAATTACACACGCA+TGG | 0.597960 | 8:-59182624 | MsG0880045441.01.T01:CDS |
| CTCTGGCCTTTGAATCACAT+AGG | 0.599139 | 8:+59184251 | None:intergenic |
| TGCGTGTGTAATTCACCTCA+GGG | 0.611857 | 8:+59182627 | None:intergenic |
| CATAGGAAGAAGAATAGTGA+AGG | 0.614022 | 8:-59184298 | MsG0880045441.01.T01:CDS |
| ACATGCATTGGAGCCAGGAA+GGG | 0.617973 | 8:-59183420 | MsG0880045441.01.T01:CDS |
| CAAGAAAACATTCTCTCCCA+AGG | 0.620681 | 8:-59182992 | MsG0880045441.01.T01:CDS |
| CAGCAAAGTATCCAGCAAAG+AGG | 0.621117 | 8:+59183321 | None:intergenic |
| CAAAAGAACCCATCTGAGAG+AGG | 0.622907 | 8:+59183294 | None:intergenic |
| TTTCTCAAAATTGCAGACAG+CGG | 0.634596 | 8:-59182415 | MsG0880045441.01.T01:three_prime_UTR |
| AAATGAAATACTTCCACGTG+AGG | 0.641659 | 8:-59182575 | MsG0880045441.01.T01:three_prime_UTR |
| ACAAGGTGCTCATATTGTTG+AGG | 0.645307 | 8:-59184181 | MsG0880045441.01.T01:CDS |
| GCTTGAACCACTACCTCACG+TGG | 0.645650 | 8:+59182562 | None:intergenic |
| GGGTCTAGGCCAAATTCCGA+AGG | 0.645748 | 8:+59183455 | None:intergenic |
| GTGAAGGCAAGTTTAGAACA+AGG | 0.646091 | 8:-59184282 | MsG0880045441.01.T01:CDS |
| AGCAAGGTTCTAGTAGTGGG+AGG | 0.646523 | 8:-59184330 | MsG0880045441.01.T01:CDS |
| AGATGAACCTTGTCTCTAGG+AGG | 0.656944 | 8:+59183269 | None:intergenic |
| GTTGTAAGGAAGCCCTCAGG+AGG | 0.661067 | 8:+59182911 | None:intergenic |
| GAAGACATATATTCCTCCTG+AGG | 0.665530 | 8:-59182924 | MsG0880045441.01.T01:CDS |
| AAGACATATATTCCTCCTGA+GGG | 0.669732 | 8:-59182923 | MsG0880045441.01.T01:CDS |
| AGCATCCAAGCTTTACCCTG+AGG | 0.701976 | 8:-59182642 | MsG0880045441.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTTAATGTTAAAAATT+TGG | - | Chr8:59183132-59183151 | MsG0880045441.01.T01:intron | 10.0% |
| !! | TTGTTTAATGTTAAAAATTT+GGG | - | Chr8:59183133-59183152 | MsG0880045441.01.T01:intron | 10.0% |
| !!! | ATTTTTAGACATAAATTTTT+AGG | + | Chr8:59184175-59184194 | None:intergenic | 10.0% |
| !! | AAAGATTAAGAAATTAAGAT+AGG | + | Chr8:59182784-59182803 | None:intergenic | 15.0% |
| !! | TATTAAGGTAATTAATTTCT+TGG | - | Chr8:59182750-59182769 | MsG0880045441.01.T01:intron | 15.0% |
| !! | TTAATTTCCTAATACATATA+AGG | + | Chr8:59183946-59183965 | None:intergenic | 15.0% |
| !! | ATTAGATATTAGATATGCAA+CGG | + | Chr8:59183176-59183195 | None:intergenic | 20.0% |
| !! | ATTTGACATAATTACATACA+TGG | - | Chr8:59183234-59183253 | MsG0880045441.01.T01:intron | 20.0% |
| !! | GTATATAATTCATTTGAGAA+AGG | - | Chr8:59182945-59182964 | MsG0880045441.01.T01:CDS | 20.0% |
| !! | TAAGTGAAAGACATTTATAT+TGG | - | Chr8:59183101-59183120 | MsG0880045441.01.T01:intron | 20.0% |
| !! | TGTATGTAATTATGTCAAAT+TGG | + | Chr8:59183234-59183253 | None:intergenic | 20.0% |
| !! | TTAATGACAATATATAGTTC+AGG | + | Chr8:59182995-59183014 | None:intergenic | 20.0% |
| !!! | AAGGTATAATGTTTTGTTTA+AGG | + | Chr8:59183748-59183767 | None:intergenic | 20.0% |
| !!! | CATTTAATATCTGAAATATC+CGG | + | Chr8:59184302-59184321 | None:intergenic | 20.0% |
| ! | GTTAAAATTACCTTACCATT+AGG | - | Chr8:59184243-59184262 | MsG0880045441.01.T01:CDS | 25.0% |
| ! | TATAAACTTCAAGTAGCAAT+TGG | - | Chr8:59184035-59184054 | MsG0880045441.01.T01:CDS | 25.0% |
| ! | TTATGTCAAATTGGAAAAAG+AGG | + | Chr8:59183225-59183244 | None:intergenic | 25.0% |
| ! | TTCAAATTGAGAAGATTCAA+AGG | - | Chr8:59182545-59182564 | MsG0880045441.01.T01:three_prime_UTR | 25.0% |
| !! | TTCTATCATATTTTCTACGA+GGG | - | Chr8:59184062-59184081 | MsG0880045441.01.T01:CDS | 25.0% |
| !!! | AAAGTTTGTTGAACTTGTAA+AGG | + | Chr8:59183549-59183568 | None:intergenic | 25.0% |
| !!! | GTTTGACAAACTTTGAAATA+GGG | - | Chr8:59184087-59184106 | MsG0880045441.01.T01:CDS | 25.0% |
| !!! | TGTTTGACAAACTTTGAAAT+AGG | - | Chr8:59184086-59184105 | MsG0880045441.01.T01:CDS | 25.0% |
| !!! | TTTATGTGAAATTGATTTGC+AGG | - | Chr8:59184005-59184024 | MsG0880045441.01.T01:intron | 25.0% |
| !!! | TTTGACAAACTTTGAAATAG+GGG | - | Chr8:59184088-59184107 | MsG0880045441.01.T01:CDS | 25.0% |
| !!! | TTTGTGCTTTTAGTTCAATT+GGG | - | Chr8:59184270-59184289 | MsG0880045441.01.T01:CDS | 25.0% |
| !!! | TTTTGTGCTTTTAGTTCAAT+TGG | - | Chr8:59184269-59184288 | MsG0880045441.01.T01:CDS | 25.0% |
| AAGCTAACCAATCATGTAAT+GGG | + | Chr8:59183202-59183221 | None:intergenic | 30.0% | |
| AATATTACCAGCTTCTTTGA+TGG | + | Chr8:59182734-59182753 | None:intergenic | 30.0% | |
| ATGAAACCTATGTGATTCAA+AGG | - | Chr8:59182509-59182528 | MsG0880045441.01.T01:three_prime_UTR | 30.0% | |
| CAAAGAAGCTGGTAATATTA+AGG | - | Chr8:59182735-59182754 | MsG0880045441.01.T01:CDS | 30.0% | |
| CAGAAGAAAAAGAGAGAAAA+TGG | - | Chr8:59182408-59182427 | MsG0880045441.01.T01:three_prime_UTR | 30.0% | |
| CATATTAGGAGTCATAGTAT+TGG | - | Chr8:59182685-59182704 | MsG0880045441.01.T01:CDS | 30.0% | |
| CTATATCTGGTGTTCATATT+AGG | - | Chr8:59182671-59182690 | MsG0880045441.01.T01:CDS | 30.0% | |
| CTTCTTTCATTCAAGAAACA+AGG | - | Chr8:59182568-59182587 | MsG0880045441.01.T01:three_prime_UTR | 30.0% | |
| TAGTTCAATTGGGAATAAAC+CGG | - | Chr8:59184280-59184299 | MsG0880045441.01.T01:CDS | 30.0% | |
| TATACAGATTGTGATCGATT+TGG | + | Chr8:59182930-59182949 | None:intergenic | 30.0% | |
| TCTTGCACCTTATATGTATT+AGG | - | Chr8:59183936-59183955 | MsG0880045441.01.T01:intron | 30.0% | |
| TGTATGTTCGTATTCGAATT+TGG | - | Chr8:59183587-59183606 | MsG0880045441.01.T01:intron | 30.0% | |
| TGTTACCTTTCAATGTTGTA+AGG | + | Chr8:59183872-59183891 | None:intergenic | 30.0% | |
| TTTGGAGATGGAAAACATAA+AGG | - | Chr8:59183521-59183540 | MsG0880045441.01.T01:intron | 30.0% | |
| ! | AAAAGCACAAAATCTCCTAA+TGG | + | Chr8:59184261-59184280 | None:intergenic | 30.0% |
| ! | CTTCTATCATATTTTCTACG+AGG | - | Chr8:59184061-59184080 | MsG0880045441.01.T01:CDS | 30.0% |
| ! | GGTAACATTTGATGACAAAA+TGG | - | Chr8:59183367-59183386 | MsG0880045441.01.T01:CDS | 30.0% |
| !!! | AATGTTTTGTTTAAGGTTCG+AGG | + | Chr8:59183741-59183760 | None:intergenic | 30.0% |
| AAATGAAATACTTCCACGTG+AGG | - | Chr8:59184191-59184210 | MsG0880045441.01.T01:CDS | 35.0% | |
| AAATTCCAATAAGCTCTCCT+TGG | + | Chr8:59183794-59183813 | None:intergenic | 35.0% | |
| AAGACATATATTCCTCCTGA+GGG | - | Chr8:59183843-59183862 | MsG0880045441.01.T01:intron | 35.0% | |
| AAGGAGAGCTTATTGGAATT+TGG | - | Chr8:59183793-59183812 | MsG0880045441.01.T01:intron | 35.0% | |
| AATTCCAATAAGCTCTCCTT+GGG | + | Chr8:59183793-59183812 | None:intergenic | 35.0% | |
| AGAGAAAATGGAAAAGAGCA+AGG | - | Chr8:59182420-59182439 | MsG0880045441.01.T01:three_prime_UTR | 35.0% | |
| AGCTAACCAATCATGTAATG+GGG | + | Chr8:59183201-59183220 | None:intergenic | 35.0% | |
| AGGAGAGCTTATTGGAATTT+GGG | - | Chr8:59183794-59183813 | MsG0880045441.01.T01:intron | 35.0% | |
| ATGCAACGGTATTCACATAT+TGG | + | Chr8:59183162-59183181 | None:intergenic | 35.0% | |
| CACAAAATCTCCTAATGGTA+AGG | + | Chr8:59184256-59184275 | None:intergenic | 35.0% | |
| CATAGGAAGAAGAATAGTGA+AGG | - | Chr8:59182468-59182487 | MsG0880045441.01.T01:three_prime_UTR | 35.0% | |
| GAAACTTATTGGAAAAGAGC+TGG | - | Chr8:59183818-59183837 | MsG0880045441.01.T01:intron | 35.0% | |
| GAAGCTAACCAATCATGTAA+TGG | + | Chr8:59183203-59183222 | None:intergenic | 35.0% | |
| GGAATTTGGGAGAAACTTAT+TGG | - | Chr8:59183807-59183826 | MsG0880045441.01.T01:intron | 35.0% | |
| TAATGACCCCATTACATGAT+TGG | - | Chr8:59183192-59183211 | MsG0880045441.01.T01:intron | 35.0% | |
| TCTTGTTGATGCTATCAAGA+AGG | - | Chr8:59182630-59182649 | MsG0880045441.01.T01:CDS | 35.0% | |
| TGCAACGGTATTCACATATT+GGG | + | Chr8:59183161-59183180 | None:intergenic | 35.0% | |
| TTAGCAGAGATGTAAGTGAA+AGG | + | Chr8:59183425-59183444 | None:intergenic | 35.0% | |
| TTTCTCAAAATTGCAGACAG+CGG | - | Chr8:59184351-59184370 | MsG0880045441.01.T01:exon | 35.0% | |
| ! | GAATGTTTTCTTGTGGTCTA+AGG | + | Chr8:59183767-59183786 | None:intergenic | 35.0% |
| ! | TTGATGACAAAATGGCTGTA+AGG | - | Chr8:59183375-59183394 | MsG0880045441.01.T01:CDS | 35.0% |
| !! | AACTTTGAAATAGGGGAAGA+TGG | - | Chr8:59184095-59184114 | MsG0880045441.01.T01:CDS | 35.0% |
| !! | GTGAAATTGATTTGCAGGAT+TGG | - | Chr8:59184010-59184029 | MsG0880045441.01.T01:intron | 35.0% |
| !! | TGTGATCGATTTGGTCTATA+TGG | + | Chr8:59182921-59182940 | None:intergenic | 35.0% |
| AAGAGATGAACCTTGTCTCT+AGG | + | Chr8:59183503-59183522 | None:intergenic | 40.0% | |
| AGAGACAAGGTTCATCTCTT+TGG | - | Chr8:59183503-59183522 | MsG0880045441.01.T01:intron | 40.0% | |
| CAAGAAAACATTCTCTCCCA+AGG | - | Chr8:59183774-59183793 | MsG0880045441.01.T01:intron | 40.0% | |
| GAAGACATATATTCCTCCTG+AGG | - | Chr8:59183842-59183861 | MsG0880045441.01.T01:intron | 40.0% | |
| GGCTTCCTTACAACATTGAA+AGG | - | Chr8:59183864-59183883 | MsG0880045441.01.T01:intron | 40.0% | |
| GTTGTCATCAGTGCTATATC+TGG | - | Chr8:59182658-59182677 | MsG0880045441.01.T01:CDS | 40.0% | |
| TCAAGCACAGACATGTTTGT+TGG | - | Chr8:59184221-59184240 | MsG0880045441.01.T01:CDS | 40.0% | |
| TCATCAAATGTTACCCTTCC+TGG | + | Chr8:59183362-59183381 | None:intergenic | 40.0% | |
| TGCAGACAGCGGTTATAATT+TGG | - | Chr8:59184362-59184381 | MsG0880045441.01.T01:five_prime_UTR | 40.0% | |
| ! | AAAGAGCAAGGTTCTAGTAG+TGG | - | Chr8:59182432-59182451 | MsG0880045441.01.T01:three_prime_UTR | 40.0% |
| ! | AAGAGCAAGGTTCTAGTAGT+GGG | - | Chr8:59182433-59182452 | MsG0880045441.01.T01:three_prime_UTR | 40.0% |
| ! | AAGGTTCATCTCTTTGGAGA+TGG | - | Chr8:59183509-59183528 | MsG0880045441.01.T01:intron | 40.0% |
| ! | ACAAGGTGCTCATATTGTTG+AGG | - | Chr8:59182585-59182604 | MsG0880045441.01.T01:exon | 40.0% |
| ! | GTGAAGGCAAGTTTAGAACA+AGG | - | Chr8:59182484-59182503 | MsG0880045441.01.T01:three_prime_UTR | 40.0% |
| ! | TCAATTTGAAGTCCCAACTC+TGG | + | Chr8:59182535-59182554 | None:intergenic | 40.0% |
| ! | TGGGAGAGAATGTTTTCTTG+TGG | + | Chr8:59183774-59183793 | None:intergenic | 40.0% |
| !! | CGATTTGGTCTATATGGTTC+AGG | + | Chr8:59182915-59182934 | None:intergenic | 40.0% |
| AATACTTCCACGTGAGGTAG+TGG | - | Chr8:59184197-59184216 | MsG0880045441.01.T01:CDS | 45.0% | |
| AATGCATGTCCCATTCTTGC+TGG | + | Chr8:59183335-59183354 | None:intergenic | 45.0% | |
| AATGTTGTAAGGAAGCCCTC+AGG | + | Chr8:59183861-59183880 | None:intergenic | 45.0% | |
| ACACTAGCGTTTCTTGCCTT+CGG | - | Chr8:59183295-59183314 | MsG0880045441.01.T01:CDS | 45.0% | |
| AGATGAACCTTGTCTCTAGG+AGG | + | Chr8:59183500-59183519 | None:intergenic | 45.0% | |
| AGCAAGAATGGGACATGCAT+TGG | - | Chr8:59183334-59183353 | MsG0880045441.01.T01:CDS | 45.0% | |
| ATCTCTGCTAACCTCTTTGC+TGG | - | Chr8:59183434-59183453 | MsG0880045441.01.T01:CDS | 45.0% | |
| ATGCATGTCCCATTCTTGCT+GGG | + | Chr8:59183334-59183353 | None:intergenic | 45.0% | |
| ATGCGTGTGTAATTCACCTC+AGG | + | Chr8:59184143-59184162 | None:intergenic | 45.0% | |
| ATTCACCTCAGGGTAAAGCT+TGG | + | Chr8:59184132-59184151 | None:intergenic | 45.0% | |
| CAAAAGAACCCATCTGAGAG+AGG | + | Chr8:59183475-59183494 | None:intergenic | 45.0% | |
| CGTTTCTTGCCTTCGGAATT+TGG | - | Chr8:59183302-59183321 | MsG0880045441.01.T01:CDS | 45.0% | |
| CTCTTTGCTGGATACTTTGC+TGG | - | Chr8:59183446-59183465 | MsG0880045441.01.T01:CDS | 45.0% | |
| GTGATTCAAAGGCCAGAGTT+GGG | - | Chr8:59182520-59182539 | MsG0880045441.01.T01:three_prime_UTR | 45.0% | |
| GTTGATGCCATCAAAGAAGC+TGG | - | Chr8:59182724-59182743 | MsG0880045441.01.T01:CDS | 45.0% | |
| TGAGGTGAATTACACACGCA+TGG | - | Chr8:59184142-59184161 | MsG0880045441.01.T01:CDS | 45.0% | |
| TGCGTGTGTAATTCACCTCA+GGG | + | Chr8:59184142-59184161 | None:intergenic | 45.0% | |
| TGTGATTCAAAGGCCAGAGT+TGG | - | Chr8:59182519-59182538 | MsG0880045441.01.T01:three_prime_UTR | 45.0% | |
| ! | CAGCAAAGTATCCAGCAAAG+AGG | + | Chr8:59183448-59183467 | None:intergenic | 45.0% |
| ! | CTCTGGCCTTTGAATCACAT+AGG | + | Chr8:59182518-59182537 | None:intergenic | 45.0% |
| ! | TTTTGTGCCTCCTAGAGACA+AGG | - | Chr8:59183490-59183509 | MsG0880045441.01.T01:intron | 45.0% |
| ACATGCATTGGAGCCAGGAA+GGG | - | Chr8:59183346-59183365 | MsG0880045441.01.T01:CDS | 50.0% | |
| AGCATCCAAGCTTTACCCTG+AGG | - | Chr8:59184124-59184143 | MsG0880045441.01.T01:CDS | 50.0% | |
| CTCTCCCAAGGAGAGCTTAT+TGG | - | Chr8:59183786-59183805 | MsG0880045441.01.T01:intron | 50.0% | |
| GTGGGAGGAACAGGATACAT+AGG | - | Chr8:59182451-59182470 | MsG0880045441.01.T01:three_prime_UTR | 50.0% | |
| ! | AGCAAGGTTCTAGTAGTGGG+AGG | - | Chr8:59182436-59182455 | MsG0880045441.01.T01:three_prime_UTR | 50.0% |
| ! | GTTCTAGTAGTGGGAGGAAC+AGG | - | Chr8:59182442-59182461 | MsG0880045441.01.T01:three_prime_UTR | 50.0% |
| ATGGGACATGCATTGGAGCC+AGG | - | Chr8:59183341-59183360 | MsG0880045441.01.T01:CDS | 55.0% | |
| GACATGCATTGGAGCCAGGA+AGG | - | Chr8:59183345-59183364 | MsG0880045441.01.T01:CDS | 55.0% | |
| GCTGGAAGCCTCTCTCAGAT+GGG | - | Chr8:59183464-59183483 | MsG0880045441.01.T01:CDS | 55.0% | |
| GCTTGAACCACTACCTCACG+TGG | + | Chr8:59184207-59184226 | None:intergenic | 55.0% | |
| GGCCTAGACCCAGCAAGAAT+GGG | - | Chr8:59183323-59183342 | MsG0880045441.01.T01:CDS | 55.0% | |
| GGGTCTAGGCCAAATTCCGA+AGG | + | Chr8:59183314-59183333 | None:intergenic | 55.0% | |
| GTCCCATTCTTGCTGGGTCT+AGG | + | Chr8:59183328-59183347 | None:intergenic | 55.0% | |
| GTTGTAAGGAAGCCCTCAGG+AGG | + | Chr8:59183858-59183877 | None:intergenic | 55.0% | |
| TGCTGGAAGCCTCTCTCAGA+TGG | - | Chr8:59183463-59183482 | MsG0880045441.01.T01:CDS | 55.0% | |
| TGGCCTAGACCCAGCAAGAA+TGG | - | Chr8:59183322-59183341 | MsG0880045441.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 59182388 | 59184400 | 59182388 | ID=MsG0880045441.01;Name=MsG0880045441.01 |
| Chr8 | mRNA | 59182388 | 59184400 | 59182388 | ID=MsG0880045441.01.T01;Parent=MsG0880045441.01;Name=MsG0880045441.01.T01;_AED=0.47;_eAED=0.47;_QI=39|1|1|1|1|1|4|210|312 |
| Chr8 | exon | 59182388 | 59182761 | 59182388 | ID=MsG0880045441.01.T01:exon:22779;Parent=MsG0880045441.01.T01 |
| Chr8 | exon | 59182903 | 59183106 | 59182903 | ID=MsG0880045441.01.T01:exon:22778;Parent=MsG0880045441.01.T01 |
| Chr8 | exon | 59183246 | 59183486 | 59183246 | ID=MsG0880045441.01.T01:exon:22777;Parent=MsG0880045441.01.T01 |
| Chr8 | exon | 59184032 | 59184400 | 59184032 | ID=MsG0880045441.01.T01:exon:22776;Parent=MsG0880045441.01.T01 |
| Chr8 | five_prime_UTR | 59184362 | 59184400 | 59184362 | ID=MsG0880045441.01.T01:five_prime_utr;Parent=MsG0880045441.01.T01 |
| Chr8 | CDS | 59184032 | 59184361 | 59184032 | ID=MsG0880045441.01.T01:cds;Parent=MsG0880045441.01.T01 |
| Chr8 | CDS | 59183246 | 59183486 | 59183246 | ID=MsG0880045441.01.T01:cds;Parent=MsG0880045441.01.T01 |
| Chr8 | CDS | 59182903 | 59183106 | 59182903 | ID=MsG0880045441.01.T01:cds;Parent=MsG0880045441.01.T01 |
| Chr8 | CDS | 59182598 | 59182761 | 59182598 | ID=MsG0880045441.01.T01:cds;Parent=MsG0880045441.01.T01 |
| Chr8 | three_prime_UTR | 59182388 | 59182597 | 59182388 | ID=MsG0880045441.01.T01:three_prime_utr;Parent=MsG0880045441.01.T01 |
| Gene Sequence |
| Protein sequence |
