AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180004502.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004502.01.T04 MTR_1g081280 84.043 188 17 2 1 175 51 238 4.59e-111 316
MsG0180004502.01.T04 MTR_1g081280 70.370 189 16 3 1 149 51 239 5.77e-84 248
MsG0180004502.01.T01 MTR_1g081280 89.894 188 19 0 1 188 51 238 5.86e-125 352
MsG0180004502.01.T01 MTR_1g081280 76.190 189 18 1 1 162 51 239 1.25e-97 283
MsG0180004502.01.T01 MTR_8g028545 30.435 138 89 3 48 182 91 224 2.22e-19 82.8
MsG0180004502.01.T03 MTR_1g081280 89.894 188 19 0 1 188 51 238 5.86e-125 352
MsG0180004502.01.T03 MTR_1g081280 76.190 189 18 1 1 162 51 239 1.25e-97 283
MsG0180004502.01.T03 MTR_8g028545 30.435 138 89 3 48 182 91 224 2.22e-19 82.8
MsG0180004502.01.T02 MTR_1g081280 88.298 188 18 1 1 184 51 238 8.69e-121 341
MsG0180004502.01.T02 MTR_1g081280 74.603 189 17 2 1 158 51 239 1.15e-93 273
MsG0180004502.01.T02 MTR_8g028545 30.435 138 89 3 44 178 91 224 2.38e-19 82.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180004502.01.T04 AT3G04890 54.857 175 66 2 7 168 33 207 2.41e-60 187
MsG0180004502.01.T04 AT3G04890 54.286 175 67 2 7 168 37 211 4.18e-60 186
MsG0180004502.01.T04 AT3G04890 49.068 161 69 2 7 154 33 193 3.57e-46 151
MsG0180004502.01.T04 AT3G04890 48.447 161 70 2 7 154 37 197 5.02e-46 150
MsG0180004502.01.T04 AT2G46100 29.365 126 75 3 54 169 109 230 7.62e-14 67.4
MsG0180004502.01.T01 AT3G04890 57.714 175 74 0 7 181 33 207 6.88e-70 211
MsG0180004502.01.T01 AT3G04890 57.714 175 74 0 7 181 37 211 1.31e-69 211
MsG0180004502.01.T01 AT3G04890 52.174 161 77 0 7 167 33 193 1.25e-55 176
MsG0180004502.01.T01 AT3G04890 52.174 161 77 0 7 167 37 197 1.67e-55 175
MsG0180004502.01.T01 AT2G46100 30.682 176 113 4 11 182 60 230 1.38e-20 85.9
MsG0180004502.01.T03 AT3G04890 57.714 175 74 0 7 181 33 207 6.88e-70 211
MsG0180004502.01.T03 AT3G04890 57.714 175 74 0 7 181 37 211 1.31e-69 211
MsG0180004502.01.T03 AT3G04890 52.174 161 77 0 7 167 33 193 1.25e-55 176
MsG0180004502.01.T03 AT3G04890 52.174 161 77 0 7 167 37 197 1.67e-55 175
MsG0180004502.01.T03 AT2G46100 30.682 176 113 4 11 182 60 230 1.38e-20 85.9
MsG0180004502.01.T02 AT3G04890 57.714 175 70 1 7 177 33 207 3.08e-67 204
MsG0180004502.01.T02 AT3G04890 57.143 175 71 1 7 177 37 211 6.10e-67 204
MsG0180004502.01.T02 AT3G04890 52.174 161 73 1 7 163 33 193 5.25e-53 169
MsG0180004502.01.T02 AT3G04890 52.174 161 73 1 7 163 37 197 6.11e-53 169
MsG0180004502.01.T02 AT2G46100 32.540 126 80 2 54 178 109 230 4.02e-20 84.7

Find 18 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCCAACTATTAAATTTAG+TGG 0.322543 1:-78941811 MsG0180004502.01.T04:intron
GGCATAGATACCTTGTTTGT+TGG 0.359037 1:+78942474 None:intergenic
TTACCACTAAATTTAATAGT+TGG 0.387007 1:+78941808 None:intergenic
AGATACCTTGTTTGTTGGAG+AGG 0.500425 1:+78942479 None:intergenic
GGAGAGGAGAGAAAAGCCTC+AGG 0.522489 1:+78942495 None:intergenic
GGACGCCACCCTTGCTGTTG+CGG 0.524042 1:-78942643 MsG0180004502.01.T04:five_prime_UTR
GCGGAGTGACGGAGCTCCTG+AGG 0.554237 1:-78942511 MsG0180004502.01.T04:CDS
GATTGCAGTGAGCGGAGTGA+CGG 0.565614 1:-78942522 MsG0180004502.01.T04:CDS
AGAAAGAAATGAAACCCCTC+AGG 0.569312 1:-78942552 MsG0180004502.01.T04:CDS
TGTTTCCGCAACAGCAAGGG+TGG 0.575559 1:+78942638 None:intergenic
CTGCAATCTTCAGAACCTGA+GGG 0.576531 1:+78942537 None:intergenic
TCTCTCCTCTCCAACAAACA+AGG 0.582792 1:-78942484 MsG0180004502.01.T04:intron
TGTTGTTTCCGCAACAGCAA+GGG 0.587584 1:+78942635 None:intergenic
GTGTTGTTTCCGCAACAGCA+AGG 0.594278 1:+78942634 None:intergenic
GACTTGTGCAATTTATAACA+TGG 0.596814 1:-78942579 MsG0180004502.01.T04:intron
ACTGCAATCTTCAGAACCTG+AGG 0.643213 1:+78942536 None:intergenic
GTTCTGAAGATTGCAGTGAG+CGG 0.663984 1:-78942530 MsG0180004502.01.T04:CDS
TGCAATCTTCAGAACCTGAG+GGG 0.670652 1:+78942538 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATATAAATTAATAATGC+AGG - Chr1:78942350-78942369 MsG0180004502.01.T04:intron 10.0%
!! ATGAAAAAATATTTGATAAG+AGG + Chr1:78941754-78941773 None:intergenic 15.0%
!! CTATATAAATTAAGAATCAT+AGG + Chr1:78942812-78942831 None:intergenic 15.0%
!! TGAAAAAATATTTGATAAGA+GGG + Chr1:78941753-78941772 None:intergenic 15.0%
!! AACACTGCATATTAATAAAT+TGG + Chr1:78941593-78941612 None:intergenic 20.0%
!! AATAAAGACATTTATTACCT+GGG + Chr1:78940993-78941012 None:intergenic 20.0%
!! TTACCACTAAATTTAATAGT+TGG + Chr1:78941936-78941955 None:intergenic 20.0%
!!! GATAAAGATTTGTTTTTACT+CGG + Chr1:78940854-78940873 None:intergenic 20.0%
!!! TTAAAGATTTGAAACATCTA+GGG + Chr1:78942079-78942098 None:intergenic 20.0%
!!! TTTAAAGATTTGAAACATCT+AGG + Chr1:78942080-78942099 None:intergenic 20.0%
! AAACAACTATAAGAGCTAAA+AGG - Chr1:78942098-78942117 MsG0180004502.01.T04:CDS 25.0%
! AAACATATGAACCAATGAAT+TGG - Chr1:78940913-78940932 MsG0180004502.01.T04:three_prime_UTR 25.0%
! AAGTTAGAAGAATAGGTAAT+GGG + Chr1:78940886-78940905 None:intergenic 25.0%
! AGACTAGCATAAGATATTAT+AGG + Chr1:78941974-78941993 None:intergenic 25.0%
! AGATGCTTAGAAAAATATAC+AGG + Chr1:78942878-78942897 None:intergenic 25.0%
! ATAAAAGTAGTTGACACATA+CGG + Chr1:78941417-78941436 None:intergenic 25.0%
! CATTAACAACTATATACAGT+AGG + Chr1:78942843-78942862 None:intergenic 25.0%
! GAATAAAGACATTTATTACC+TGG + Chr1:78940994-78941013 None:intergenic 25.0%
! GATCCAACTATTAAATTTAG+TGG - Chr1:78941930-78941949 MsG0180004502.01.T04:intron 25.0%
! TAGACTACTAAAGATCAAAA+AGG - Chr1:78942255-78942274 MsG0180004502.01.T04:intron 25.0%
! TGATGTTCTAATCATCATAA+AGG - Chr1:78941666-78941685 MsG0180004502.01.T04:intron 25.0%
!! CTTACTTTGTTTGAGATTTA+GGG - Chr1:78941865-78941884 MsG0180004502.01.T04:intron 25.0%
!! TCTTACTTTGTTTGAGATTT+AGG - Chr1:78941864-78941883 MsG0180004502.01.T04:intron 25.0%
!!! ATTTTCAAGTTTGATAAACC+AGG - Chr1:78942729-78942748 MsG0180004502.01.T04:intron 25.0%
AAGTGTTTGTGCTACATAAA+TGG + Chr1:78941291-78941310 None:intergenic 30.0%
ACATCATCAATACTTGAAAC+TGG + Chr1:78941652-78941671 None:intergenic 30.0%
ATAGTTGTTAATGACGCAAT+TGG - Chr1:78942850-78942869 MsG0180004502.01.T04:five_prime_UTR 30.0%
ATCATCAATACTTGAAACTG+GGG + Chr1:78941650-78941669 None:intergenic 30.0%
ATTAACATGCTTAATGAGCA+AGG + Chr1:78942429-78942448 None:intergenic 30.0%
CATCATCAATACTTGAAACT+GGG + Chr1:78941651-78941670 None:intergenic 30.0%
CTAGTTATGCATATGCTTAT+CGG + Chr1:78942912-78942931 None:intergenic 30.0%
GAAGTTAGAAGAATAGGTAA+TGG + Chr1:78940887-78940906 None:intergenic 30.0%
GACTTGTGCAATTTATAACA+TGG - Chr1:78941162-78941181 MsG0180004502.01.T04:intron 30.0%
GATCTTTAGTAGTCTAATTG+AGG + Chr1:78942251-78942270 None:intergenic 30.0%
GTTTATTATCTCTCAATCTC+AGG - Chr1:78942479-78942498 MsG0180004502.01.T04:intron 30.0%
TCTATGATGTATGATCATAC+AGG - Chr1:78942172-78942191 MsG0180004502.01.T04:intron 30.0%
TGCTTAGAAGTTAGAAGAAT+AGG + Chr1:78940893-78940912 None:intergenic 30.0%
TTTAGATTACATGCCAGAAA+AGG + Chr1:78941840-78941859 None:intergenic 30.0%
! AAGAATCATAGGCATTTTCA+TGG + Chr1:78942801-78942820 None:intergenic 30.0%
! ATTATGAGTCGAAAGTTTTG+AGG + Chr1:78942606-78942625 None:intergenic 30.0%
! TTCAACATCATTTCCTTTTC+TGG - Chr1:78941824-78941843 MsG0180004502.01.T04:CDS 30.0%
!! ATTTTGTTTGACAGATCGTT+CGG - Chr1:78942661-78942680 MsG0180004502.01.T04:intron 30.0%
ATAATGCAGGATGTTGAATC+TGG - Chr1:78942363-78942382 MsG0180004502.01.T04:intron 35.0%
CAACATTGACGCTTAAACAT+TGG + Chr1:78941384-78941403 None:intergenic 35.0%
CGATAAGCATATGCATAACT+AGG - Chr1:78942910-78942929 MsG0180004502.01.T04:five_prime_UTR 35.0%
CTGAATCTCTTGTTAAGACT+AGG - Chr1:78941077-78941096 MsG0180004502.01.T04:intron 35.0%
GATGTATGATCATACAGGTA+GGG - Chr1:78942177-78942196 MsG0180004502.01.T04:intron 35.0%
TCGAAATCCATGTTAACTAG+TGG - Chr1:78942631-78942650 MsG0180004502.01.T04:five_prime_UTR 35.0%
TGATGTATGATCATACAGGT+AGG - Chr1:78942176-78942195 MsG0180004502.01.T04:intron 35.0%
! ACATAAGTTGACGATTAGTG+AGG + Chr1:78941542-78941561 None:intergenic 35.0%
! TTCAAGTTTGATAAACCAGG+TGG - Chr1:78942732-78942751 MsG0180004502.01.T04:intron 35.0%
!! GCATGTTTTTGCCAATTCAT+TGG + Chr1:78940927-78940946 None:intergenic 35.0%
AGAAAGAAATGAAACCCCTC+AGG - Chr1:78941189-78941208 MsG0180004502.01.T04:CDS 40.0%
AGACATTTATTACCTGGGAG+TGG + Chr1:78940988-78941007 None:intergenic 40.0%
ATGTGTCAAGTGTACGACAT+TGG + Chr1:78941351-78941370 None:intergenic 40.0%
CTTCCATCAATAGCAATCAG+AGG + Chr1:78942529-78942548 None:intergenic 40.0%
GAAGTGTAAGGCTATTGTAG+GGG + Chr1:78940966-78940985 None:intergenic 40.0%
GCTTAAACATTGGCCAATGT+CGG + Chr1:78941374-78941393 None:intergenic 40.0%
GGTGTATGTGTATGTGTAAG+AGG - Chr1:78941471-78941490 MsG0180004502.01.T04:intron 40.0%
GTTGCAACCACTAGTTAACA+TGG + Chr1:78942641-78942660 None:intergenic 40.0%
TGCGTGCATCTTGGAAATTA+AGG - Chr1:78942397-78942416 MsG0180004502.01.T04:intron 40.0%
TGTGTATGTGTAAGAGGTAG+TGG - Chr1:78941477-78941496 MsG0180004502.01.T04:intron 40.0%
! AGATACCTTGTTTGTTGGAG+AGG + Chr1:78941265-78941284 None:intergenic 40.0%
! CAAATTTTCTGCGTGCATCT+TGG - Chr1:78942388-78942407 MsG0180004502.01.T04:intron 40.0%
! GCAAAAACATGCTGCTTCAA+CGG - Chr1:78940935-78940954 MsG0180004502.01.T04:three_prime_UTR 40.0%
! GCACAAGTCTTTTTGCTACA+CGG + Chr1:78941151-78941170 None:intergenic 40.0%
! GGAAGTGTAAGGCTATTGTA+GGG + Chr1:78940967-78940986 None:intergenic 40.0%
! GGCATAGATACCTTGTTTGT+TGG + Chr1:78941270-78941289 None:intergenic 40.0%
! TGGAAGTGTAAGGCTATTGT+AGG + Chr1:78940968-78940987 None:intergenic 40.0%
AACCAGGTGGTTGAATGTCA+TGG - Chr1:78942745-78942764 MsG0180004502.01.T04:intron 45.0%
ACACTTGACACATCCGACAT+TGG - Chr1:78941358-78941377 MsG0180004502.01.T04:CDS 45.0%
ACTGCAATCTTCAGAACCTG+AGG + Chr1:78941208-78941227 None:intergenic 45.0%
ATGCATATTTCCCTGGCAGT+TGG + Chr1:78941518-78941537 None:intergenic 45.0%
ATTGAGGCACAGTCGAAGAA+TGG + Chr1:78942235-78942254 None:intergenic 45.0%
CCAACTTAAAACTTCCGTGG+AGG - Chr1:78942503-78942522 MsG0180004502.01.T04:CDS 45.0%
CTGCAATCTTCAGAACCTGA+GGG + Chr1:78941207-78941226 None:intergenic 45.0%
CTTCAGAGTGAAGACGTCTT+TGG - Chr1:78941308-78941327 MsG0180004502.01.T04:intron 45.0%
GGACCAACTTAAAACTTCCG+TGG - Chr1:78942500-78942519 MsG0180004502.01.T04:CDS 45.0%
GTGAGGAATGCATATTTCCC+TGG + Chr1:78941525-78941544 None:intergenic 45.0%
TCGTTCGGCATATTGAGAGT+TGG - Chr1:78942676-78942695 MsG0180004502.01.T04:intron 45.0%
TCTCTCCTCTCCAACAAACA+AGG - Chr1:78941257-78941276 MsG0180004502.01.T04:intron 45.0%
TGCAATCTTCAGAACCTGAG+GGG + Chr1:78941206-78941225 None:intergenic 45.0%
! AGGCCTCTGATTGCTATTGA+TGG - Chr1:78942523-78942542 MsG0180004502.01.T04:CDS 45.0%
! GAGGTAGTGGTTCATGTTGT+TGG - Chr1:78941490-78941509 MsG0180004502.01.T04:CDS 45.0%
!! GTTCTGAAGATTGCAGTGAG+CGG - Chr1:78941211-78941230 MsG0180004502.01.T04:CDS 45.0%
!! TGTTGTTTCCGCAACAGCAA+GGG + Chr1:78941109-78941128 None:intergenic 45.0%
!!! CCTCCACGGAAGTTTTAAGT+TGG + Chr1:78942506-78942525 None:intergenic 45.0%
!!! GACAGCGCTTATTTTGTCAC+AGG - Chr1:78941697-78941716 MsG0180004502.01.T04:intron 45.0%
!!! GAGTCGAAAGTTTTGAGGCA+AGG + Chr1:78942601-78942620 None:intergenic 45.0%
!!! TCGAAAGTTTTGAGGCAAGG+AGG + Chr1:78942598-78942617 None:intergenic 45.0%
AGGTGGTTGAATGTCATGGC+GGG - Chr1:78942749-78942768 MsG0180004502.01.T04:intron 50.0%
ATAGCAATCAGAGGCCTCCA+CGG + Chr1:78942520-78942539 None:intergenic 50.0%
CAGGTGGTTGAATGTCATGG+CGG - Chr1:78942748-78942767 MsG0180004502.01.T04:intron 50.0%
GTTGTTGGAACCAACTGCCA+GGG - Chr1:78941505-78941524 MsG0180004502.01.T04:CDS 50.0%
TACCAGTGTCATGTCTGCTC+TGG - Chr1:78941450-78941469 MsG0180004502.01.T04:intron 50.0%
TGTTGTTGGAACCAACTGCC+AGG - Chr1:78941504-78941523 MsG0180004502.01.T04:CDS 50.0%
! TACCTGGGAGTGGAAGTGTA+AGG + Chr1:78940978-78940997 None:intergenic 50.0%
!! GTGTTGTTTCCGCAACAGCA+AGG + Chr1:78941110-78941129 None:intergenic 50.0%
!! TTGAATGTCATGGCGGGTGA+GGG - Chr1:78942755-78942774 MsG0180004502.01.T04:intron 50.0%
AGCCTTACACTTCCACTCCC+AGG - Chr1:78940973-78940992 MsG0180004502.01.T04:three_prime_UTR 55.0%
CACCAGAGCAGACATGACAC+TGG + Chr1:78941455-78941474 None:intergenic 55.0%
CGCCATGACATTCAACCACC+TGG + Chr1:78942750-78942769 None:intergenic 55.0%
GATTGCAGTGAGCGGAGTGA+CGG - Chr1:78941219-78941238 MsG0180004502.01.T04:CDS 55.0%
GGAGAGGAGAGAAAAGCCTC+AGG + Chr1:78941249-78941268 None:intergenic 55.0%
TGTTTCCGCAACAGCAAGGG+TGG + Chr1:78941106-78941125 None:intergenic 55.0%
!! GTTGAATGTCATGGCGGGTG+AGG - Chr1:78942754-78942773 MsG0180004502.01.T04:intron 55.0%
!! GGACGCCACCCTTGCTGTTG+CGG - Chr1:78941098-78941117 MsG0180004502.01.T04:intron 65.0%
! GCGGAGTGACGGAGCTCCTG+AGG - Chr1:78941230-78941249 MsG0180004502.01.T04:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 78940832 78942931 78940832 ID=MsG0180004502.01;Name=MsG0180004502.01
Chr1 mRNA 78940832 78942931 78940832 ID=MsG0180004502.01.T01;Parent=MsG0180004502.01;Name=MsG0180004502.01.T01;_AED=0.49;_eAED=0.49;_QI=250|1|1|1|0|0|8|173|188
Chr1 exon 78942485 78942669 78942485 ID=MsG0180004502.01.T01:exon:15276;Parent=MsG0180004502.01.T01
Chr1 five_prime_UTR 78942769 78942931 78942769 ID=MsG0180004502.01.T01:five_prime_utr;Parent=MsG0180004502.01.T01
Chr1 five_prime_UTR 78942583 78942669 78942583 ID=MsG0180004502.01.T01:five_prime_utr;Parent=MsG0180004502.01.T01
Chr1 CDS 78942485 78942582 78942485 ID=MsG0180004502.01.T01:cds;Parent=MsG0180004502.01.T01
Chr1 CDS 78942045 78942154 78942045 ID=MsG0180004502.01.T01:cds;Parent=MsG0180004502.01.T01
Chr1 CDS 78941812 78941877 78941812 ID=MsG0180004502.01.T01:cds;Parent=MsG0180004502.01.T01
Chr1 CDS 78941487 78941569 78941487 ID=MsG0180004502.01.T01:cds;Parent=MsG0180004502.01.T01
Chr1 CDS 78941345 78941391 78941345 ID=MsG0180004502.01.T01:cds;Parent=MsG0180004502.01.T01
Chr1 CDS 78941184 78941262 78941184 ID=MsG0180004502.01.T01:cds;Parent=MsG0180004502.01.T01
Chr1 CDS 78941005 78941088 78941005 ID=MsG0180004502.01.T01:cds;Parent=MsG0180004502.01.T01
Chr1 three_prime_UTR 78940832 78941004 78940832 ID=MsG0180004502.01.T01:three_prime_utr;Parent=MsG0180004502.01.T01
Chr1 mRNA 78940832 78942931 78940832 ID=MsG0180004502.01.T02;Parent=MsG0180004502.01;Name=MsG0180004502.01.T02;_AED=0.49;_eAED=0.49;_QI=245|0.85|0.87|1|0|0|8|173|184
Chr1 five_prime_UTR 78942769 78942931 78942769 ID=MsG0180004502.01.T02:five_prime_utr;Parent=MsG0180004502.01.T02
Chr1 five_prime_UTR 78942583 78942664 78942583 ID=MsG0180004502.01.T02:five_prime_utr;Parent=MsG0180004502.01.T02
Chr1 CDS 78942485 78942582 78942485 ID=MsG0180004502.01.T02:cds;Parent=MsG0180004502.01.T02
Chr1 CDS 78942045 78942142 78942045 ID=MsG0180004502.01.T02:cds;Parent=MsG0180004502.01.T02
Chr1 CDS 78941812 78941877 78941812 ID=MsG0180004502.01.T02:cds;Parent=MsG0180004502.01.T02
Chr1 CDS 78941487 78941569 78941487 ID=MsG0180004502.01.T02:cds;Parent=MsG0180004502.01.T02
Chr1 CDS 78941345 78941391 78941345 ID=MsG0180004502.01.T02:cds;Parent=MsG0180004502.01.T02
Chr1 CDS 78941184 78941262 78941184 ID=MsG0180004502.01.T02:cds;Parent=MsG0180004502.01.T02
Chr1 CDS 78941005 78941088 78941005 ID=MsG0180004502.01.T02:cds;Parent=MsG0180004502.01.T02
Chr1 three_prime_UTR 78940832 78941004 78940832 ID=MsG0180004502.01.T02:three_prime_utr;Parent=MsG0180004502.01.T02
Chr1 mRNA 78940832 78942931 78940832 ID=MsG0180004502.01.T03;Parent=MsG0180004502.01;Name=MsG0180004502.01.T03;_AED=0.49;_eAED=0.49;_QI=229|0.85|0.87|1|0|0|8|173|188
Chr1 exon 78942485 78942648 78942485 ID=MsG0180004502.01.T03:exon:15285;Parent=MsG0180004502.01.T03
Chr1 five_prime_UTR 78942769 78942931 78942769 ID=MsG0180004502.01.T03:five_prime_utr;Parent=MsG0180004502.01.T03
Chr1 five_prime_UTR 78942583 78942648 78942583 ID=MsG0180004502.01.T03:five_prime_utr;Parent=MsG0180004502.01.T03
Chr1 CDS 78942485 78942582 78942485 ID=MsG0180004502.01.T03:cds;Parent=MsG0180004502.01.T03
Chr1 CDS 78942045 78942154 78942045 ID=MsG0180004502.01.T03:cds;Parent=MsG0180004502.01.T03
Chr1 CDS 78941812 78941877 78941812 ID=MsG0180004502.01.T03:cds;Parent=MsG0180004502.01.T03
Chr1 CDS 78941487 78941569 78941487 ID=MsG0180004502.01.T03:cds;Parent=MsG0180004502.01.T03
Chr1 CDS 78941345 78941391 78941345 ID=MsG0180004502.01.T03:cds;Parent=MsG0180004502.01.T03
Chr1 CDS 78941184 78941262 78941184 ID=MsG0180004502.01.T03:cds;Parent=MsG0180004502.01.T03
Chr1 CDS 78941005 78941088 78941005 ID=MsG0180004502.01.T03:cds;Parent=MsG0180004502.01.T03
Chr1 three_prime_UTR 78940832 78941004 78940832 ID=MsG0180004502.01.T03:three_prime_utr;Parent=MsG0180004502.01.T03
Chr1 mRNA 78940832 78942931 78940832 ID=MsG0180004502.01.T04;Parent=MsG0180004502.01;Name=MsG0180004502.01.T04;_AED=0.49;_eAED=0.49;_QI=245|0.71|0.75|1|0|0|8|173|175
Chr1 exon 78941812 78941850 78941812 ID=MsG0180004502.01.T04:exon:15286;Parent=MsG0180004502.01.T04
Chr1 five_prime_UTR 78942769 78942931 78942769 ID=MsG0180004502.01.T04:five_prime_utr;Parent=MsG0180004502.01.T04
Chr1 five_prime_UTR 78942583 78942664 78942583 ID=MsG0180004502.01.T04:five_prime_utr;Parent=MsG0180004502.01.T04
Chr1 CDS 78942485 78942582 78942485 ID=MsG0180004502.01.T04:cds;Parent=MsG0180004502.01.T04
Chr1 CDS 78942045 78942142 78942045 ID=MsG0180004502.01.T04:cds;Parent=MsG0180004502.01.T04
Chr1 CDS 78941812 78941850 78941812 ID=MsG0180004502.01.T04:cds;Parent=MsG0180004502.01.T04
Chr1 CDS 78941487 78941569 78941487 ID=MsG0180004502.01.T04:cds;Parent=MsG0180004502.01.T04
Chr1 CDS 78941345 78941391 78941345 ID=MsG0180004502.01.T04:cds;Parent=MsG0180004502.01.T04
Chr1 CDS 78941184 78941262 78941184 ID=MsG0180004502.01.T04:cds;Parent=MsG0180004502.01.T04
Chr1 CDS 78941005 78941088 78941005 ID=MsG0180004502.01.T04:cds;Parent=MsG0180004502.01.T04
Chr1 three_prime_UTR 78940832 78941004 78940832 ID=MsG0180004502.01.T04:three_prime_utr;Parent=MsG0180004502.01.T04
Gene Sequence

>MsG0180004502.01.T04

ATGGTAAAAGAAAGAAATGAAACCCCTCAGGTTCTGAAGATTGCAGTGAGCGGAGTGACGGAGCTCCTGAGGCTTTTCTCTCCTCTCCAACAAACAAGTAACGTTGAGAAACAGAATAATGACTCCCCAGTTTCAAGTATTGATGATGTTCTAATCATCATAAAGGATGATTATGACAGCGCTTATTTTGTCACAGAAAATTGTATCTTTGAAGATCCAACTATTAAATTTAGTGGTAGGGACTTATATGCGCGCAACTTGAAATTACTCGTTCCATTCTTCGACTGTGCCTCAATTAGACTACTAAAGATCAAAAAGGATGTTGAATCTGGCACAAATTTTCTGCGTGCATCTTGGAAATTAAGGACCAACTTAAAACTTCCGTGGAGGCCTCTGATTGCTATTGATGGAAGCACTTCTTATGAATTGAATGAAGATTTCAAAATCGTTCGGCATATTGAGAGTTGGAATGTTTCTGCACTTGAAGCAGTTTTGCAGATTTTCAAGTTTGATAAACCAGGTGGTTGA

>MsG0180004502.01.T01

ATGGTAAAAGAAAGAAATGAAACCCCTCAGGTTCTGAAGATTGCAGTGAGCGGAGTGACGGAGCTCCTGAGGCTTTTCTCTCCTCTCCAACAAACAAGTGTTTTAAGCAGTAACGTTGAGAAACAGAATAATGACTCCCCAGTTTCAAGTATTGATGATGTTCTAATCATCATAAAGGATGATTATGACAGCGCTTATTTTGTCACAGGGAACTTCACTTCTTCAATTTACGCAGAAAATTGTATCTTTGAAGATCCAACTATTAAATTTAGTGGTAGGGACTTATATGCGCGCAACTTGAAATTACTCGTTCCATTCTTCGACTGTGCCTCAATTAGACTACTAAAGATCAAAAAGGATGTTGAATCTGGCACAAATTTTCTGCGTGCATCTTGGAAATTAAGGACCAACTTAAAACTTCCGTGGAGGCCTCTGATTGCTATTGATGGAAGCACTTCTTATGAATTGAATGAAGATTTCAAAATCGTTCGGCATATTGAGAGTTGGAATGTTTCTGCACTTGAAGCAGTTTTGCAGATTTTCAAGTTTGATAAACCAGGTGGTTGA

>MsG0180004502.01.T03

ATGGTAAAAGAAAGAAATGAAACCCCTCAGGTTCTGAAGATTGCAGTGAGCGGAGTGACGGAGCTCCTGAGGCTTTTCTCTCCTCTCCAACAAACAAGTGTTTTAAGCAGTAACGTTGAGAAACAGAATAATGACTCCCCAGTTTCAAGTATTGATGATGTTCTAATCATCATAAAGGATGATTATGACAGCGCTTATTTTGTCACAGGGAACTTCACTTCTTCAATTTACGCAGAAAATTGTATCTTTGAAGATCCAACTATTAAATTTAGTGGTAGGGACTTATATGCGCGCAACTTGAAATTACTCGTTCCATTCTTCGACTGTGCCTCAATTAGACTACTAAAGATCAAAAAGGATGTTGAATCTGGCACAAATTTTCTGCGTGCATCTTGGAAATTAAGGACCAACTTAAAACTTCCGTGGAGGCCTCTGATTGCTATTGATGGAAGCACTTCTTATGAATTGAATGAAGATTTCAAAATCGTTCGGCATATTGAGAGTTGGAATGTTTCTGCACTTGAAGCAGTTTTGCAGATTTTCAAGTTTGATAAACCAGGTGGTTGA

>MsG0180004502.01.T02

ATGGTAAAAGAAAGAAATGAAACCCCTCAGGTTCTGAAGATTGCAGTGAGCGGAGTGACGGAGCTCCTGAGGCTTTTCTCTCCTCTCCAACAAACAAGTAACGTTGAGAAACAGAATAATGACTCCCCAGTTTCAAGTATTGATGATGTTCTAATCATCATAAAGGATGATTATGACAGCGCTTATTTTGTCACAGGGAACTTCACTTCTTCAATTTACGCAGAAAATTGTATCTTTGAAGATCCAACTATTAAATTTAGTGGTAGGGACTTATATGCGCGCAACTTGAAATTACTCGTTCCATTCTTCGACTGTGCCTCAATTAGACTACTAAAGATCAAAAAGGATGTTGAATCTGGCACAAATTTTCTGCGTGCATCTTGGAAATTAAGGACCAACTTAAAACTTCCGTGGAGGCCTCTGATTGCTATTGATGGAAGCACTTCTTATGAATTGAATGAAGATTTCAAAATCGTTCGGCATATTGAGAGTTGGAATGTTTCTGCACTTGAAGCAGTTTTGCAGATTTTCAAGTTTGATAAACCAGGTGGTTGA

Protein sequence

>MsG0180004502.01.T04

MVKERNETPQVLKIAVSGVTELLRLFSPLQQTSNVEKQNNDSPVSSIDDVLIIIKDDYDSAYFVTENCIFEDPTIKFSGRDLYARNLKLLVPFFDCASIRLLKIKKDVESGTNFLRASWKLRTNLKLPWRPLIAIDGSTSYELNEDFKIVRHIESWNVSALEAVLQIFKFDKPGG*

>MsG0180004502.01.T01

MVKERNETPQVLKIAVSGVTELLRLFSPLQQTSVLSSNVEKQNNDSPVSSIDDVLIIIKDDYDSAYFVTGNFTSSIYAENCIFEDPTIKFSGRDLYARNLKLLVPFFDCASIRLLKIKKDVESGTNFLRASWKLRTNLKLPWRPLIAIDGSTSYELNEDFKIVRHIESWNVSALEAVLQIFKFDKPGG*

>MsG0180004502.01.T03

MVKERNETPQVLKIAVSGVTELLRLFSPLQQTSVLSSNVEKQNNDSPVSSIDDVLIIIKDDYDSAYFVTGNFTSSIYAENCIFEDPTIKFSGRDLYARNLKLLVPFFDCASIRLLKIKKDVESGTNFLRASWKLRTNLKLPWRPLIAIDGSTSYELNEDFKIVRHIESWNVSALEAVLQIFKFDKPGG*

>MsG0180004502.01.T02

MVKERNETPQVLKIAVSGVTELLRLFSPLQQTSNVEKQNNDSPVSSIDDVLIIIKDDYDSAYFVTGNFTSSIYAENCIFEDPTIKFSGRDLYARNLKLLVPFFDCASIRLLKIKKDVESGTNFLRASWKLRTNLKLPWRPLIAIDGSTSYELNEDFKIVRHIESWNVSALEAVLQIFKFDKPGG*