AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380014802.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014802.01.T01 MTR_3g464580 98.938 565 6 0 5 569 22 586 0.0 1172
MsG0380014802.01.T01 MTR_3g464580 98.770 488 6 0 5 492 22 509 0.0 1015
MsG0380014802.01.T01 MTR_5g071360 85.310 565 81 2 5 569 22 584 0.0 1013
MsG0380014802.01.T01 MTR_5g071360 86.735 490 64 1 5 494 22 510 0.0 904
MsG0380014802.01.T01 MTR_3g464580 97.674 430 9 1 5 434 22 450 0.0 881
MsG0380014802.01.T01 MTR_3g087220 74.954 539 134 1 5 543 22 559 0.0 879
MsG0380014802.01.T01 MTR_5g069310 75.524 143 34 1 427 569 2 143 1.80e-69 220
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380014802.01.T01 AT3G47340 80.565 566 106 3 5 569 22 584 0.0 973
MsG0380014802.01.T01 AT5G10240 78.090 534 116 1 5 538 22 554 0.0 905
MsG0380014802.01.T01 AT5G65010 77.111 533 121 1 2 534 19 550 0.0 896
MsG0380014802.01.T01 AT5G65010 77.154 534 120 2 2 534 19 551 0.0 894
MsG0380014802.01.T01 AT5G10240 77.095 537 121 2 2 538 19 553 0.0 894
MsG0380014802.01.T01 AT3G47340 82.992 488 82 1 5 492 22 508 0.0 877
MsG0380014802.01.T01 AT3G47340 82.620 397 68 1 5 401 22 417 0.0 717
MsG0380014802.01.T01 AT3G47340 83.828 303 48 1 99 401 1 302 0.0 550

Find 137 sgRNAs with CRISPR-Local

Find 246 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGCATATGTTGATTTAT+TGG 0.113242 3:+60345993 None:intergenic
AACACTATCATATTGTAATT+TGG 0.171106 3:-60344664 MsG0380014802.01.T01:three_prime_UTR
CTTCTTTGTTTGGTGCCTTA+TGG 0.206839 3:+60346181 None:intergenic
TGAATTTCAGTTTACTATTC+AGG 0.209606 3:-60346982 MsG0380014802.01.T01:intron
AATAATATTCTGGCTTTATT+AGG 0.218404 3:+60344845 None:intergenic
TGGATTGCATCAGAATTAAA+AGG 0.220309 3:-60347647 MsG0380014802.01.T01:CDS
GGAGTCAAATGGGTGATTTC+TGG 0.221522 3:-60346243 MsG0380014802.01.T01:CDS
CATATGATGTAACTACAATT+AGG 0.241861 3:-60346311 MsG0380014802.01.T01:CDS
TCTATAGTAATATGCTTCTT+TGG 0.249070 3:+60345390 None:intergenic
CACTTCCTTGTACATTGGTT+GGG 0.257852 3:-60347780 MsG0380014802.01.T01:CDS
AGATTAGAAATTTCCATCTT+TGG 0.261394 3:+60344915 None:intergenic
CTTCTCTGGCTCTACAGTTT+TGG 0.272062 3:+60344944 None:intergenic
GCCATTGTTGATCCTGCTTC+TGG 0.280821 3:-60348242 MsG0380014802.01.T01:CDS
CCAACATGGTGATAACTATT+TGG 0.283627 3:-60348279 MsG0380014802.01.T01:CDS
TTACCTTGCGGCATGTTTCT+TGG 0.286349 3:+60346151 None:intergenic
TGGTTGGATTGATGGTATTA+AGG 0.289578 3:-60345581 MsG0380014802.01.T01:CDS
CAATTGAGTGGGATGCTTCT+TGG 0.292591 3:-60345046 MsG0380014802.01.T01:CDS
AAGATGGAAATTTCTAATCT+TGG 0.303255 3:-60344912 MsG0380014802.01.T01:CDS
TCAAGCAACCTTGATCCTTC+TGG 0.306690 3:-60345023 MsG0380014802.01.T01:CDS
GATTACAGGCTGTGATAAAA+AGG 0.326265 3:-60347336 MsG0380014802.01.T01:intron
TATTGTTAGTATGAGGAGTA+TGG 0.327420 3:-60347899 MsG0380014802.01.T01:intron
TGGTGAAACTCTTCTTTGTT+TGG 0.329318 3:+60346171 None:intergenic
CAAATGCTATGTTATGTATA+AGG 0.331359 3:-60344760 MsG0380014802.01.T01:three_prime_UTR
TGGAGGTTTGGATTCTTCAT+TGG 0.339121 3:-60347278 MsG0380014802.01.T01:CDS
CTACTTCTCTTCCAGCCTTA+AGG 0.348738 3:+60347030 None:intergenic
TATGTAGTATAATAATATTC+TGG 0.351740 3:+60344835 None:intergenic
TCAGCAAGGCTAACAGTTCC+TGG 0.360471 3:-60345101 MsG0380014802.01.T01:CDS
ATCTTTGGTATAATCTTCTC+TGG 0.371278 3:+60344930 None:intergenic
TTGTTATTGTAGGTTCTGTT+TGG 0.373539 3:-60347667 MsG0380014802.01.T01:intron
GTTGGCTATGGTTGGATTGA+TGG 0.373548 3:-60345589 MsG0380014802.01.T01:CDS
CATTGATCCTGAGTACAAAA+TGG 0.374006 3:-60345914 MsG0380014802.01.T01:intron
CTCATTCTGTGTAGGACTTA+AGG 0.378447 3:-60347188 MsG0380014802.01.T01:intron
TTGTTGCGAGGGATGCTATA+GGG 0.380417 3:-60347805 MsG0380014802.01.T01:CDS
TATCATAAAATTCAGGTGAA+TGG 0.381079 3:-60348103 MsG0380014802.01.T01:intron
TACATTGGTTGGGGACTAGA+TGG 0.386232 3:-60347770 MsG0380014802.01.T01:intron
CACAAAAGCTGCTAAGCAAT+GGG 0.391623 3:-60347224 MsG0380014802.01.T01:CDS
CTCAAAACTAGAGGATCATA+AGG 0.403123 3:+60347500 None:intergenic
CCTTCTGGAAGAGCAGCATT+TGG 0.406608 3:-60345008 MsG0380014802.01.T01:CDS
TCACTTCCTTGTACATTGGT+TGG 0.408558 3:-60347781 MsG0380014802.01.T01:CDS
TGTGTACGGAATTTGTGATT+AGG 0.411870 3:+60348043 None:intergenic
TCAAATCATCAGGAGTCAAA+TGG 0.416775 3:-60346254 MsG0380014802.01.T01:CDS
TTAGGGTGCACCTGACCTTA+AGG 0.420678 3:-60347045 MsG0380014802.01.T01:intron
TGGTGGAGCCCACTCCAGTC+TGG 0.424835 3:+60348299 None:intergenic
ATATGATGTAACTACAATTA+GGG 0.426432 3:-60346310 MsG0380014802.01.T01:CDS
AGAGAAGATTATACCAAAGA+TGG 0.434916 3:-60344928 MsG0380014802.01.T01:CDS
TGCAGATCAAAGCTCTTCAT+AGG 0.436093 3:-60346032 MsG0380014802.01.T01:intron
TAATATGCTTCTTTGGTAAG+AGG 0.437384 3:+60345397 None:intergenic
AAGAAGGAAGAATTGAGAAA+TGG 0.439977 3:-60345795 MsG0380014802.01.T01:CDS
AGGGTATTTGTATTTCCATA+AGG 0.443024 3:-60346196 MsG0380014802.01.T01:CDS
AGAGGATCATAAGGGGTTGT+TGG 0.444662 3:+60347509 None:intergenic
TTGAGTACCTTAGGAAGGTA+AGG 0.458332 3:+60345739 None:intergenic
GCCTTGATAAAATACACAAC+AGG 0.459381 3:+60344782 None:intergenic
GGGGTCACTTCCTTGTACAT+TGG 0.460121 3:-60347785 MsG0380014802.01.T01:CDS
TCAAAACTAGAGGATCATAA+GGG 0.460214 3:+60347501 None:intergenic
TGTCTCATATTAGCTTTGAA+TGG 0.461591 3:+60344884 None:intergenic
ATTGTTGCGAGGGATGCTAT+AGG 0.464075 3:-60347806 MsG0380014802.01.T01:CDS
TCTCTTCCAGCCTTAAGGTC+AGG 0.474929 3:+60347035 None:intergenic
ACTTCCTTGTACATTGGTTG+GGG 0.475172 3:-60347779 MsG0380014802.01.T01:CDS
GAATTGAGAAATGGATACTA+AGG 0.475694 3:-60345786 MsG0380014802.01.T01:CDS
TCTCGAAAGATCAAATCATC+AGG 0.483191 3:-60346264 MsG0380014802.01.T01:CDS
TGAAGCACCGTGGTCCAGAC+TGG 0.485903 3:-60348313 MsG0380014802.01.T01:CDS
CTGTGATGTTATTGCACACC+TGG 0.486927 3:-60348014 MsG0380014802.01.T01:intron
TTATGTTAAATTTGAATGCA+AGG 0.489283 3:-60344618 MsG0380014802.01.T01:three_prime_UTR
GTTCAGATAAAACATGAAGA+AGG 0.491067 3:-60345811 MsG0380014802.01.T01:intron
GCACAAAAGCTGCTAAGCAA+TGG 0.493861 3:-60347225 MsG0380014802.01.T01:CDS
CAAATCATCAGGAGTCAAAT+GGG 0.497991 3:-60346253 MsG0380014802.01.T01:CDS
CTGCTCTTCCAGAAGGATCA+AGG 0.507380 3:+60345015 None:intergenic
CAATAAATCAACATATGCAT+GGG 0.509465 3:-60345992 MsG0380014802.01.T01:CDS
TTTAAAAGAAAGACTAGATG+TGG 0.512437 3:+60344703 None:intergenic
AAGACCGGGAGTTTCGTAGA+TGG 0.513657 3:-60347565 MsG0380014802.01.T01:CDS
GGATTGCATCAGAATTAAAA+GGG 0.514030 3:-60347646 MsG0380014802.01.T01:CDS
GTGATGGAGTTGGCTATGGT+TGG 0.516816 3:-60345597 MsG0380014802.01.T01:CDS
TCTACAATCATGAAGACCTC+AGG 0.520006 3:-60348075 MsG0380014802.01.T01:CDS
TTCAGTGATGGAGTTGGCTA+TGG 0.523214 3:-60345601 MsG0380014802.01.T01:CDS
TTGGTAAGAGGAGTGTTGAA+AGG 0.529245 3:+60345409 None:intergenic
AGAGGTTGATCACCAGAAGC+AGG 0.531123 3:+60348230 None:intergenic
ATAACTATTTGGCTCATCAA+AGG 0.533219 3:-60348268 MsG0380014802.01.T01:CDS
ACTTGTACTCGAGCAAAGAC+CGG 0.535273 3:-60347580 MsG0380014802.01.T01:CDS
CTTGTACTCGAGCAAAGACC+GGG 0.536345 3:-60347579 MsG0380014802.01.T01:CDS
CAACAGTTTCATTGTTGCGA+GGG 0.541209 3:-60347816 MsG0380014802.01.T01:CDS
GGTGCACCTGACCTTAAGGC+TGG 0.541650 3:-60347041 MsG0380014802.01.T01:CDS
AGCAGTCACTGCTAGATACC+TGG 0.543495 3:-60347251 MsG0380014802.01.T01:CDS
TAGTAAACTGAAATTCATGA+TGG 0.544517 3:+60346988 None:intergenic
AATAGTTATCACCATGTTGG+TGG 0.545301 3:+60348282 None:intergenic
CCAATAAATCAACATATGCA+TGG 0.548770 3:-60345993 MsG0380014802.01.T01:CDS
AAATGGGTGATTTCTGGAGA+AGG 0.550290 3:-60346237 MsG0380014802.01.T01:CDS
ACCGTGGTCCAGACTGGAGT+GGG 0.551709 3:-60348307 MsG0380014802.01.T01:CDS
CAGAAGGAACAGTTCAGTGA+TGG 0.554559 3:-60345613 MsG0380014802.01.T01:CDS
CCAAATGCTGCTCTTCCAGA+AGG 0.561506 3:+60345008 None:intergenic
AAATTACACTCATTCTGTGT+AGG 0.565107 3:-60347196 MsG0380014802.01.T01:CDS
GGATTTCATCAAAGTTGCAA+TGG 0.568271 3:-60345938 MsG0380014802.01.T01:CDS
AGAGAATCCTTACCTTCCTA+AGG 0.568467 3:-60345746 MsG0380014802.01.T01:intron
TTTCGAGACATCAGAAACAT+AGG 0.569570 3:+60346279 None:intergenic
TTTGAGGAACGCCTTTGAGA+AGG 0.571044 3:-60347483 MsG0380014802.01.T01:intron
CATCACAGTCACATTGTGTA+CGG 0.573999 3:+60348029 None:intergenic
ACTATAGAATGATCTTTGAG+AGG 0.575357 3:-60345375 MsG0380014802.01.T01:CDS
TGTTGCGAGGGATGCTATAG+GGG 0.583881 3:-60347804 MsG0380014802.01.T01:CDS
CATGCAACACTAGCTCCTCC+AGG 0.589828 3:+60345083 None:intergenic
GAACAGTTCAGTGATGGAGT+TGG 0.592459 3:-60345607 MsG0380014802.01.T01:CDS
TATAGTCAATAATTGCATAG+AGG 0.594968 3:-60344814 MsG0380014802.01.T01:three_prime_UTR
TTGATGACTGATGTGCCGTT+CGG 0.596910 3:-60347313 MsG0380014802.01.T01:CDS
TAGAGTTGAGTACCTTAGGA+AGG 0.599420 3:+60345734 None:intergenic
CCAAATAGTTATCACCATGT+TGG 0.601085 3:+60348279 None:intergenic
TCGATTTGTAGAACTCAGCA+AGG 0.601528 3:-60345115 MsG0380014802.01.T01:intron
GGATGGCATAGATGCAATTG+AGG 0.606055 3:-60346355 MsG0380014802.01.T01:CDS
TAGTCCCCAACCAATGTACA+AGG 0.608478 3:+60347775 None:intergenic
GCACAGAGAAAGCAATTGAG+TGG 0.609213 3:-60345058 MsG0380014802.01.T01:CDS
GATTTGTCTTCATTGAAGAG+AGG 0.610358 3:+60348212 None:intergenic
CACCGTGGTCCAGACTGGAG+TGG 0.611314 3:-60348308 MsG0380014802.01.T01:CDS
CACAGAGAAAGCAATTGAGT+GGG 0.611414 3:-60345057 MsG0380014802.01.T01:CDS
AGACAAATCTATTATTGTCA+CGG 0.614131 3:-60348198 MsG0380014802.01.T01:intron
TGTACCATCTACGAAACTCC+CGG 0.614554 3:+60347561 None:intergenic
GATTAGGCAATTGTTTCCTG+AGG 0.616657 3:+60348059 None:intergenic
TGAGAAATGGATACTAAGGA+AGG 0.617704 3:-60345782 MsG0380014802.01.T01:CDS
AGCTAATATGAGACATGGCA+AGG 0.619874 3:-60344876 MsG0380014802.01.T01:exon
GTCACTGCTAGATACCTGGC+TGG 0.621089 3:-60347247 MsG0380014802.01.T01:CDS
TGTGAATCTTACCTTCTCAA+AGG 0.629969 3:+60347472 None:intergenic
CATAAGCAGTATTCAAATAG+CGG 0.633647 3:+60344594 None:intergenic
GCCCACTCCAGTCTGGACCA+CGG 0.634064 3:+60348306 None:intergenic
AAGGCGTTCCTCAAAACTAG+AGG 0.639779 3:+60347491 None:intergenic
ACAACAGTTTCATTGTTGCG+AGG 0.640177 3:-60347817 MsG0380014802.01.T01:CDS
TTCAAAGCTAATATGAGACA+TGG 0.641602 3:-60344881 MsG0380014802.01.T01:exon
TGGAGTGGGCTCCACCAACA+TGG 0.641715 3:-60348293 MsG0380014802.01.T01:CDS
TTGCTCGAGTACAAGTGACC+AGG 0.642279 3:+60347587 None:intergenic
CCAGATAGTAAAACACCGAA+CGG 0.643802 3:+60347298 None:intergenic
CTCGAGTACAAGTGACCAGG+TGG 0.647322 3:+60347590 None:intergenic
CAATCCTCCGTGGTTCAATG+AGG 0.653887 3:-60347540 MsG0380014802.01.T01:CDS
TCACCAAGAAACATGCCGCA+AGG 0.655836 3:-60346154 MsG0380014802.01.T01:intron
CAAAACTAGAGGATCATAAG+GGG 0.656036 3:+60347502 None:intergenic
ACCAGAAGCAGGATCAACAA+TGG 0.667593 3:+60348241 None:intergenic
AATAAATCAACATATGCATG+GGG 0.691237 3:-60345991 MsG0380014802.01.T01:CDS
ACAAAAGCTGCTAAGCAATG+GGG 0.694915 3:-60347223 MsG0380014802.01.T01:CDS
ATAATAGCCTCATTGAACCA+CGG 0.694926 3:+60347533 None:intergenic
GTAGATGGTACAATCCTCCG+TGG 0.707926 3:-60347550 MsG0380014802.01.T01:CDS
GCAAGGCTAACAGTTCCTGG+AGG 0.746433 3:-60345098 MsG0380014802.01.T01:CDS
ATAGCCTCATTGAACCACGG+AGG 0.797295 3:+60347536 None:intergenic
TGTCACAGATTGAAGCACCG+TGG 0.798262 3:-60348323 MsG0380014802.01.T01:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAATTAATAAGTAACAT+TGG - Chr3:60344786-60344805 MsG0380014802.01.T01:three_prime_UTR 10.0%
!!! ATTACATTTTTTATACTATA+TGG - Chr3:60345027-60345046 MsG0380014802.01.T01:CDS 10.0%
!!! TAAATTTTATCATAAAATTC+AGG - Chr3:60345073-60345092 MsG0380014802.01.T01:CDS 10.0%
!! CAAATTAAATTTGCAAATTA+TGG + Chr3:60347500-60347519 None:intergenic 15.0%
!! TATGTAGTATAATAATATTC+TGG + Chr3:60348351-60348370 None:intergenic 15.0%
!!! ACATTTTTATAATATCATAG+GGG - Chr3:60346750-60346769 MsG0380014802.01.T01:intron 15.0%
!!! ATTAGCAATGTTTTAAATAA+AGG + Chr3:60345228-60345247 None:intergenic 15.0%
!!! ATTGCTTTAATCTTTATTTA+TGG - Chr3:60346107-60346126 MsG0380014802.01.T01:intron 15.0%
!!! ATTTCATAAATTTTATCAGA+CGG + Chr3:60345750-60345769 None:intergenic 15.0%
!!! CACATTTTTATAATATCATA+GGG - Chr3:60346749-60346768 MsG0380014802.01.T01:intron 15.0%
!!! TAATTTTTATTGTTAGTATG+AGG - Chr3:60345277-60345296 MsG0380014802.01.T01:intron 15.0%
!! AACACTATCATATTGTAATT+TGG - Chr3:60348519-60348538 MsG0380014802.01.T01:intron 20.0%
!! ATATGATGTAACTACAATTA+GGG - Chr3:60346873-60346892 MsG0380014802.01.T01:intron 20.0%
!! ATTAAACAAAAGTAAGACAT+GGG - Chr3:60344596-60344615 MsG0380014802.01.T01:three_prime_UTR 20.0%
!! TACTATATGGTATAATAAAG+TGG - Chr3:60345040-60345059 MsG0380014802.01.T01:CDS 20.0%
!! TGAAATTAGAAAGAAAATGT+TGG + Chr3:60347657-60347676 None:intergenic 20.0%
!! TTATGTTAAATTTGAATGCA+AGG - Chr3:60348565-60348584 MsG0380014802.01.T01:intron 20.0%
!! TTTACTTTAATAAATCACGT+GGG - Chr3:60344715-60344734 MsG0380014802.01.T01:three_prime_UTR 20.0%
!!! AATAATATTCTGGCTTTATT+AGG + Chr3:60348341-60348360 None:intergenic 20.0%
!!! ATGGAAAAAAAATTTGTTCA+AGG - Chr3:60346077-60346096 MsG0380014802.01.T01:intron 20.0%
!!! CATTTTTATAATATCATAGG+GGG - Chr3:60346751-60346770 MsG0380014802.01.T01:intron 20.0%
!!! GCACATTTTTATAATATCAT+AGG - Chr3:60346748-60346767 MsG0380014802.01.T01:intron 20.0%
!!! GTGGATTATTAGTTTTTTAA+TGG - Chr3:60346058-60346077 MsG0380014802.01.T01:intron 20.0%
!!! GTTCTTGAAATTTTTCATAT+AGG - Chr3:60347713-60347732 MsG0380014802.01.T01:intron 20.0%
!!! TATTTATGGTATGTTGATTA+GGG - Chr3:60346121-60346140 MsG0380014802.01.T01:intron 20.0%
!!! TTATTTATGGTATGTTGATT+AGG - Chr3:60346120-60346139 MsG0380014802.01.T01:intron 20.0%
!!! TTTTACTTTAATAAATCACG+TGG - Chr3:60344714-60344733 MsG0380014802.01.T01:three_prime_UTR 20.0%
! AAGATGGAAATTTCTAATCT+TGG - Chr3:60348271-60348290 MsG0380014802.01.T01:CDS 25.0%
! AATAAATCAACATATGCATG+GGG - Chr3:60347192-60347211 MsG0380014802.01.T01:CDS 25.0%
! ACCAAAATCAATAACATTCT+TGG + Chr3:60345258-60345277 None:intergenic 25.0%
! AGACAAATCTATTATTGTCA+CGG - Chr3:60344985-60345004 MsG0380014802.01.T01:CDS 25.0%
! AGATTAGAAATTTCCATCTT+TGG + Chr3:60348271-60348290 None:intergenic 25.0%
! ATTTGATTAGGCCTTTATTA+AGG + Chr3:60348039-60348058 None:intergenic 25.0%
! CAAATGCTATGTTATGTATA+AGG - Chr3:60348423-60348442 MsG0380014802.01.T01:intron 25.0%
! CAATAAATCAACATATGCAT+GGG - Chr3:60347191-60347210 MsG0380014802.01.T01:CDS 25.0%
! CATATGATGTAACTACAATT+AGG - Chr3:60346872-60346891 MsG0380014802.01.T01:intron 25.0%
! GATTAAACAAAAGTAAGACA+TGG - Chr3:60344595-60344614 MsG0380014802.01.T01:three_prime_UTR 25.0%
! TAGTAAACTGAAATTCATGA+TGG + Chr3:60346198-60346217 None:intergenic 25.0%
! TATAGTCAATAATTGCATAG+AGG - Chr3:60348369-60348388 MsG0380014802.01.T01:intron 25.0%
! TATCATAAAATTCAGGTGAA+TGG - Chr3:60345080-60345099 MsG0380014802.01.T01:CDS 25.0%
! TCTATAGTAATATGCTTCTT+TGG + Chr3:60347796-60347815 None:intergenic 25.0%
! TGAATTTCAGTTTACTATTC+AGG - Chr3:60346201-60346220 MsG0380014802.01.T01:CDS 25.0%
! TGTTGTTATGATGCAATAAT+TGG - Chr3:60344626-60344645 MsG0380014802.01.T01:three_prime_UTR 25.0%
! TTAAACAAAAGTAAGACATG+GGG - Chr3:60344597-60344616 MsG0380014802.01.T01:three_prime_UTR 25.0%
! TTATGATGCAATAATTGGTT+CGG - Chr3:60344631-60344650 MsG0380014802.01.T01:three_prime_UTR 25.0%
! TTGGACTTTATGTATATGAA+CGG + Chr3:60344754-60344773 None:intergenic 25.0%
! TTTAAAAGAAAGACTAGATG+TGG + Chr3:60348483-60348502 None:intergenic 25.0%
!! GAATCAAAAATCAATTTTCG+TGG - Chr3:60346039-60346058 MsG0380014802.01.T01:intron 25.0%
!! GTCTTTCTTTTAAATTGATG+TGG - Chr3:60348489-60348508 MsG0380014802.01.T01:intron 25.0%
!! TGAATAATTTGTGACAAGTT+TGG - Chr3:60345486-60345505 MsG0380014802.01.T01:intron 25.0%
!!! ACAATTCTCACTTTTTAAGT+CGG - Chr3:60345774-60345793 MsG0380014802.01.T01:CDS 25.0%
!!! ACCAAGAATGTTATTGATTT+TGG - Chr3:60345254-60345273 MsG0380014802.01.T01:intron 25.0%
!!! TCTTTTTCGTTGATTTTGTT+GGG + Chr3:60344664-60344683 None:intergenic 25.0%
!!! TTTATTTTTGTGGTCTATGT+AGG - Chr3:60346807-60346826 MsG0380014802.01.T01:intron 25.0%
AAAGTAAAAATTCCACATGC+AGG + Chr3:60344703-60344722 None:intergenic 30.0%
AAATTACACTCATTCTGTGT+AGG - Chr3:60345987-60346006 MsG0380014802.01.T01:CDS 30.0%
AAGAAGGAAGAATTGAGAAA+TGG - Chr3:60347388-60347407 MsG0380014802.01.T01:intron 30.0%
ACTATAGAATGATCTTTGAG+AGG - Chr3:60347808-60347827 MsG0380014802.01.T01:CDS 30.0%
AGAGAAGATTATACCAAAGA+TGG - Chr3:60348255-60348274 MsG0380014802.01.T01:CDS 30.0%
ATCTTTGGTATAATCTTCTC+TGG + Chr3:60348256-60348275 None:intergenic 30.0%
ATGAAATCCTTGTCCAAAAA+TGG + Chr3:60347234-60347253 None:intergenic 30.0%
CATAAGCAGTATTCAAATAG+CGG + Chr3:60348592-60348611 None:intergenic 30.0%
CCAATAAATCAACATATGCA+TGG - Chr3:60347190-60347209 MsG0380014802.01.T01:CDS 30.0%
CTCAAAATTGCAAAAAGTTG+CGG - Chr3:60346386-60346405 MsG0380014802.01.T01:intron 30.0%
GAATTGAGAAATGGATACTA+AGG - Chr3:60347397-60347416 MsG0380014802.01.T01:intron 30.0%
GGATTGCATCAGAATTAAAA+GGG - Chr3:60345537-60345556 MsG0380014802.01.T01:intron 30.0%
GGTAATAGAACTACATTACA+TGG - Chr3:60347050-60347069 MsG0380014802.01.T01:intron 30.0%
GTTCAGATAAAACATGAAGA+AGG - Chr3:60347372-60347391 MsG0380014802.01.T01:intron 30.0%
TAATATGCTTCTTTGGTAAG+AGG + Chr3:60347789-60347808 None:intergenic 30.0%
TATTGCATCATAACAACATG+TGG + Chr3:60344624-60344643 None:intergenic 30.0%
TATTGTTAGTATGAGGAGTA+TGG - Chr3:60345284-60345303 MsG0380014802.01.T01:intron 30.0%
TCAAAACTAGAGGATCATAA+GGG + Chr3:60345685-60345704 None:intergenic 30.0%
TCAAAATTGCGAAAAGATGT+GGG - Chr3:60346256-60346275 MsG0380014802.01.T01:CDS 30.0%
TGGACTTTATGTATATGAAC+GGG + Chr3:60344753-60344772 None:intergenic 30.0%
TGGATTGCATCAGAATTAAA+AGG - Chr3:60345536-60345555 MsG0380014802.01.T01:intron 30.0%
TTCAAAGCTAATATGAGACA+TGG - Chr3:60348302-60348321 MsG0380014802.01.T01:CDS 30.0%
! AATCACGTGGGAATTTTTAA+TGG - Chr3:60344727-60344746 MsG0380014802.01.T01:three_prime_UTR 30.0%
! AATGTAGTTCTATTACCTTG+CGG + Chr3:60347047-60347066 None:intergenic 30.0%
! AGAAAATTTTGTGGACATGT+TGG - Chr3:60345307-60345326 MsG0380014802.01.T01:intron 30.0%
! AGGGTATTTGTATTTCCATA+AGG - Chr3:60346987-60347006 MsG0380014802.01.T01:CDS 30.0%
! ATAACTATTTGGCTCATCAA+AGG - Chr3:60344915-60344934 MsG0380014802.01.T01:CDS 30.0%
! TATCATACCATTTTGTACTC+AGG + Chr3:60347279-60347298 None:intergenic 30.0%
! TATCTTTTCATTTGTTCTGC+TGG - Chr3:60345334-60345353 MsG0380014802.01.T01:intron 30.0%
! TCATGCAGCACATTTTATAT+AGG - Chr3:60347547-60347566 MsG0380014802.01.T01:CDS 30.0%
! TTGTTATTGTAGGTTCTGTT+TGG - Chr3:60345516-60345535 MsG0380014802.01.T01:intron 30.0%
!! AAATTAATTTGTCCTGCATG+TGG - Chr3:60344688-60344707 MsG0380014802.01.T01:three_prime_UTR 30.0%
!! CCATGCATATGTTGATTTAT+TGG + Chr3:60347193-60347212 None:intergenic 30.0%
!! TGTCTCATATTAGCTTTGAA+TGG + Chr3:60348302-60348321 None:intergenic 30.0%
!!! CTCTTTTTCGTTGATTTTGT+TGG + Chr3:60344665-60344684 None:intergenic 30.0%
AAAGTAGAGTTGAGTACCTT+AGG + Chr3:60347456-60347475 None:intergenic 35.0%
AATAGTTATCACCATGTTGG+TGG + Chr3:60344904-60344923 None:intergenic 35.0%
ATAAATTCTGAGTGACACCA+AGG + Chr3:60346463-60346482 None:intergenic 35.0%
ATAATAGCCTCATTGAACCA+CGG + Chr3:60345653-60345672 None:intergenic 35.0%
ATTACATGGCTCATGTTTGA+AGG - Chr3:60347064-60347083 MsG0380014802.01.T01:intron 35.0%
CAAAAAGTTGCGGTCTAATA+GGG - Chr3:60346396-60346415 MsG0380014802.01.T01:intron 35.0%
CAAAACTAGAGGATCATAAG+GGG + Chr3:60345684-60345703 None:intergenic 35.0%
CAAATCATCAGGAGTCAAAT+GGG - Chr3:60346930-60346949 MsG0380014802.01.T01:intron 35.0%
CATTGATCCTGAGTACAAAA+TGG - Chr3:60347269-60347288 MsG0380014802.01.T01:CDS 35.0%
CATTGTAATTATTGCTCTCC+AGG - Chr3:60347882-60347901 MsG0380014802.01.T01:CDS 35.0%
CCAAATAGTTATCACCATGT+TGG + Chr3:60344907-60344926 None:intergenic 35.0%
CCAACATGGTGATAACTATT+TGG - Chr3:60344904-60344923 MsG0380014802.01.T01:CDS 35.0%
CGAAAAGTTGCAGTCAAATA+GGG - Chr3:60346656-60346675 MsG0380014802.01.T01:intron 35.0%
CGAAACACAGAGATTTGATT+AGG + Chr3:60348051-60348070 None:intergenic 35.0%
CTCAAAACTAGAGGATCATA+AGG + Chr3:60345686-60345705 None:intergenic 35.0%
CTCAAAATTGCGAAAAGATG+TGG - Chr3:60346255-60346274 MsG0380014802.01.T01:CDS 35.0%
GATTACAGGCTGTGATAAAA+AGG - Chr3:60345847-60345866 MsG0380014802.01.T01:intron 35.0%
GATTTGTCTTCATTGAAGAG+AGG + Chr3:60344974-60344993 None:intergenic 35.0%
GCAATAATTACAATGTCGCT+TGG + Chr3:60347877-60347896 None:intergenic 35.0%
GCCTTGATAAAATACACAAC+AGG + Chr3:60348404-60348423 None:intergenic 35.0%
GCCTTTATTAAGGTTCTGTT+GGG + Chr3:60348029-60348048 None:intergenic 35.0%
GGACAGAAATTGCAGTAAAT+GGG + Chr3:60347479-60347498 None:intergenic 35.0%
GGATTTCATCAAAGTTGCAA+TGG - Chr3:60347245-60347264 MsG0380014802.01.T01:CDS 35.0%
TCAAATCATCAGGAGTCAAA+TGG - Chr3:60346929-60346948 MsG0380014802.01.T01:intron 35.0%
TCCCAACAGAACCTTAATAA+AGG - Chr3:60348025-60348044 MsG0380014802.01.T01:CDS 35.0%
TCTCGAAAGATCAAATCATC+AGG - Chr3:60346919-60346938 MsG0380014802.01.T01:intron 35.0%
TGAGAAATGGATACTAAGGA+AGG - Chr3:60347401-60347420 MsG0380014802.01.T01:intron 35.0%
TGAGAAGGTAAGATTCACAT+CGG - Chr3:60345715-60345734 MsG0380014802.01.T01:intron 35.0%
TGATCGATTAAGTTACCTGA+GGG + Chr3:60347839-60347858 None:intergenic 35.0%
TGATGTCACAGTCTGAATTT+GGG - Chr3:60346592-60346611 MsG0380014802.01.T01:intron 35.0%
TGGACAGAAATTGCAGTAAA+TGG + Chr3:60347480-60347499 None:intergenic 35.0%
TGGTGAAACTCTTCTTTGTT+TGG + Chr3:60347015-60347034 None:intergenic 35.0%
TGTGAATCTTACCTTCTCAA+AGG + Chr3:60345714-60345733 None:intergenic 35.0%
TGTGTACGGAATTTGTGATT+AGG + Chr3:60345143-60345162 None:intergenic 35.0%
TTGATCGATTAAGTTACCTG+AGG + Chr3:60347840-60347859 None:intergenic 35.0%
TTGATGTCACAGTCTGAATT+TGG - Chr3:60346591-60346610 MsG0380014802.01.T01:intron 35.0%
TTTCGAGACATCAGAAACAT+AGG + Chr3:60346907-60346926 None:intergenic 35.0%
! AATTTTGTGGACATGTTGGA+TGG - Chr3:60345311-60345330 MsG0380014802.01.T01:intron 35.0%
! AGAGAAGTAGCAGACTTTTT+AGG - Chr3:60346166-60346185 MsG0380014802.01.T01:CDS 35.0%
! GAAGGATCTGATGAGATTTT+TGG - Chr3:60346964-60346983 MsG0380014802.01.T01:intron 35.0%
! GCACATTTTATATAGGCAGA+AGG - Chr3:60347554-60347573 MsG0380014802.01.T01:CDS 35.0%
! GCCTGTTGTGTATTTTATCA+AGG - Chr3:60348400-60348419 MsG0380014802.01.T01:intron 35.0%
! GGAGTATGGAGAAAATTTTG+TGG - Chr3:60345298-60345317 MsG0380014802.01.T01:intron 35.0%
! TGGTTGGATTGATGGTATTA+AGG - Chr3:60347602-60347621 MsG0380014802.01.T01:CDS 35.0%
! TGTTTACATGTTTTGCAGCA+TGG + Chr3:60347629-60347648 None:intergenic 35.0%
! TGTTTTACTATCTGGAGGTT+TGG - Chr3:60345893-60345912 MsG0380014802.01.T01:intron 35.0%
! TTTTTGTGGTCTATGTAGGA+TGG - Chr3:60346811-60346830 MsG0380014802.01.T01:intron 35.0%
!! AGAAGCTAGAGTACCATTTT+TGG - Chr3:60347218-60347237 MsG0380014802.01.T01:CDS 35.0%
!! GATCTGATGAGATTTTTGGA+GGG - Chr3:60346968-60346987 MsG0380014802.01.T01:intron 35.0%
!! TAGAGTACCATTTTTGGACA+AGG - Chr3:60347224-60347243 MsG0380014802.01.T01:CDS 35.0%
!!! CATTTTGAAGTTTTTCCACC+TGG - Chr3:60345578-60345597 MsG0380014802.01.T01:CDS 35.0%
!!! CTTATGATCCTCTAGTTTTG+AGG - Chr3:60345684-60345703 MsG0380014802.01.T01:intron 35.0%
!!! CTTTTTAAGTCGGTTCTGTA+AGG - Chr3:60345784-60345803 MsG0380014802.01.T01:CDS 35.0%
!!! GCTGTTTTTATAAGCTATCC+TGG + Chr3:60347903-60347922 None:intergenic 35.0%
!!! TGGCACGTTTTTGTTATTGT+AGG - Chr3:60345506-60345525 MsG0380014802.01.T01:intron 35.0%
ACAAAAGCTGCTAAGCAATG+GGG - Chr3:60345960-60345979 MsG0380014802.01.T01:CDS 40.0%
ACAACAGTTTCATTGTTGCG+AGG - Chr3:60345366-60345385 MsG0380014802.01.T01:CDS 40.0%
ACGAAAAGTCGCTGTCAAAT+AGG - Chr3:60346524-60346543 MsG0380014802.01.T01:intron 40.0%
AGAGAATCCTTACCTTCCTA+AGG - Chr3:60347437-60347456 MsG0380014802.01.T01:intron 40.0%
AGCTAATATGAGACATGGCA+AGG - Chr3:60348307-60348326 MsG0380014802.01.T01:CDS 40.0%
CAACAGTTTCATTGTTGCGA+GGG - Chr3:60345367-60345386 MsG0380014802.01.T01:CDS 40.0%
CACAAAAGCTGCTAAGCAAT+GGG - Chr3:60345959-60345978 MsG0380014802.01.T01:CDS 40.0%
CACAGAGAAAGCAATTGAGT+GGG - Chr3:60348126-60348145 MsG0380014802.01.T01:intron 40.0%
CATCACAGTCACATTGTGTA+CGG + Chr3:60345157-60345176 None:intergenic 40.0%
CATGCAGACATCAAAAACCT+TGG - Chr3:60346443-60346462 MsG0380014802.01.T01:intron 40.0%
CCAGATAGTAAAACACCGAA+CGG + Chr3:60345888-60345907 None:intergenic 40.0%
CGAAAAGATGTGGGCAAATA+GGG - Chr3:60346265-60346284 MsG0380014802.01.T01:CDS 40.0%
CGAAAAGTCGCTGTCAAATA+GGG - Chr3:60346525-60346544 MsG0380014802.01.T01:intron 40.0%
CTCATTCTGTGTAGGACTTA+AGG - Chr3:60345995-60346014 MsG0380014802.01.T01:CDS 40.0%
GATTAGGCAATTGTTTCCTG+AGG + Chr3:60345127-60345146 None:intergenic 40.0%
GCAAAAAGTTGCGGTCTAAT+AGG - Chr3:60346395-60346414 MsG0380014802.01.T01:intron 40.0%
GCGAAAAGTTGCAGTCAAAT+AGG - Chr3:60346655-60346674 MsG0380014802.01.T01:intron 40.0%
GGCCTTTATTAAGGTTCTGT+TGG + Chr3:60348030-60348049 None:intergenic 40.0%
TAGAGTTGAGTACCTTAGGA+AGG + Chr3:60347452-60347471 None:intergenic 40.0%
TCACAGCCTGTAATCAAACA+CGG + Chr3:60345842-60345861 None:intergenic 40.0%
TCACTTCCTTGTACATTGGT+TGG - Chr3:60345402-60345421 MsG0380014802.01.T01:CDS 40.0%
TCTACAATCATGAAGACCTC+AGG - Chr3:60345108-60345127 MsG0380014802.01.T01:intron 40.0%
TGAAGTCACAGTCTAGATTG+CGG - Chr3:60346723-60346742 MsG0380014802.01.T01:intron 40.0%
TGATTGCCGTGTTTGATTAC+AGG - Chr3:60345833-60345852 MsG0380014802.01.T01:intron 40.0%
TGCAGATCAAAGCTCTTCAT+AGG - Chr3:60347151-60347170 MsG0380014802.01.T01:intron 40.0%
TGGAGGTTTGGATTCTTCAT+TGG - Chr3:60345905-60345924 MsG0380014802.01.T01:intron 40.0%
TTGAGTACCTTAGGAAGGTA+AGG + Chr3:60347447-60347466 None:intergenic 40.0%
! AAATGGGTGATTTCTGGAGA+AGG - Chr3:60346946-60346965 MsG0380014802.01.T01:intron 40.0%
! ACTTCCTTGTACATTGGTTG+GGG - Chr3:60345404-60345423 MsG0380014802.01.T01:CDS 40.0%
! CACTTCCTTGTACATTGGTT+GGG - Chr3:60345403-60345422 MsG0380014802.01.T01:CDS 40.0%
! TCGATTTGTAGAACTCAGCA+AGG - Chr3:60348068-60348087 MsG0380014802.01.T01:CDS 40.0%
!! CTTCTTTGTTTGGTGCCTTA+TGG + Chr3:60347005-60347024 None:intergenic 40.0%
!! GGATCTGATGAGATTTTTGG+AGG - Chr3:60346967-60346986 MsG0380014802.01.T01:intron 40.0%
!! TTGGTAAGAGGAGTGTTGAA+AGG + Chr3:60347777-60347796 None:intergenic 40.0%
!! TTTTGGCAACTGAGTTGACT+TGG + Chr3:60348225-60348244 None:intergenic 40.0%
!!! TTCGGTGTTTTACTATCTGG+AGG - Chr3:60345888-60345907 MsG0380014802.01.T01:intron 40.0%
ACCAGAAGCAGGATCAACAA+TGG + Chr3:60344945-60344964 None:intergenic 45.0%
ACTTGTACTCGAGCAAAGAC+CGG - Chr3:60345603-60345622 MsG0380014802.01.T01:CDS 45.0%
AGAGGATCATAAGGGGTTGT+TGG + Chr3:60345677-60345696 None:intergenic 45.0%
ATTGTTGCGAGGGATGCTAT+AGG - Chr3:60345377-60345396 MsG0380014802.01.T01:CDS 45.0%
CAATTGAGTGGGATGCTTCT+TGG - Chr3:60348137-60348156 MsG0380014802.01.T01:intron 45.0%
CAGAAGGAACAGTTCAGTGA+TGG - Chr3:60347570-60347589 MsG0380014802.01.T01:CDS 45.0%
CTACTTCTCTTCCAGCCTTA+AGG + Chr3:60346156-60346175 None:intergenic 45.0%
CTGTGATGTTATTGCACACC+TGG - Chr3:60345169-60345188 MsG0380014802.01.T01:intron 45.0%
GCACAAAAGCTGCTAAGCAA+TGG - Chr3:60345958-60345977 MsG0380014802.01.T01:CDS 45.0%
GCACAGAGAAAGCAATTGAG+TGG - Chr3:60348125-60348144 MsG0380014802.01.T01:intron 45.0%
GCGAAAAGATGTGGGCAAAT+AGG - Chr3:60346264-60346283 MsG0380014802.01.T01:CDS 45.0%
GGAGTCAAATGGGTGATTTC+TGG - Chr3:60346940-60346959 MsG0380014802.01.T01:intron 45.0%
GGATGGCATAGATGCAATTG+AGG - Chr3:60346828-60346847 MsG0380014802.01.T01:intron 45.0%
GTTGGCTATGGTTGGATTGA+TGG - Chr3:60347594-60347613 MsG0380014802.01.T01:CDS 45.0%
TAGTCCCCAACCAATGTACA+AGG + Chr3:60345411-60345430 None:intergenic 45.0%
TCAAGCAACCTTGATCCTTC+TGG - Chr3:60348160-60348179 MsG0380014802.01.T01:intron 45.0%
TGTACCATCTACGAAACTCC+CGG + Chr3:60345625-60345644 None:intergenic 45.0%
TTACCTTGCGGCATGTTTCT+TGG + Chr3:60347035-60347054 None:intergenic 45.0%
TTGTTGCGAGGGATGCTATA+GGG - Chr3:60345378-60345397 MsG0380014802.01.T01:CDS 45.0%
! AAGGCGTTCCTCAAAACTAG+AGG + Chr3:60345695-60345714 None:intergenic 45.0%
! GAACAGTTCAGTGATGGAGT+TGG - Chr3:60347576-60347595 MsG0380014802.01.T01:CDS 45.0%
! TACATTGGTTGGGGACTAGA+TGG - Chr3:60345413-60345432 MsG0380014802.01.T01:CDS 45.0%
! TTCAGTGATGGAGTTGGCTA+TGG - Chr3:60347582-60347601 MsG0380014802.01.T01:CDS 45.0%
! TTGATGACTGATGTGCCGTT+CGG - Chr3:60345870-60345889 MsG0380014802.01.T01:intron 45.0%
! TTTGAGGAACGCCTTTGAGA+AGG - Chr3:60345700-60345719 MsG0380014802.01.T01:intron 45.0%
!! CTTTGAGAGGATTTTCCCTC+AGG - Chr3:60347821-60347840 MsG0380014802.01.T01:CDS 45.0%
!!! CCGTTCGGTGTTTTACTATC+TGG - Chr3:60345885-60345904 MsG0380014802.01.T01:intron 45.0%
!!! CTTCTCTGGCTCTACAGTTT+TGG + Chr3:60348242-60348261 None:intergenic 45.0%
!! ATTATAATTATTATTCTAAT+TGG + Chr3:60344773-60344792 None:intergenic 5.0%
!!! TTAATTTTATTTTATTTTTG+TGG - Chr3:60346797-60346816 MsG0380014802.01.T01:intron 5.0%
AAGACCGGGAGTTTCGTAGA+TGG - Chr3:60345618-60345637 MsG0380014802.01.T01:CDS 50.0%
AGCAGTCACTGCTAGATACC+TGG - Chr3:60345932-60345951 MsG0380014802.01.T01:CDS 50.0%
ATAGCCTCATTGAACCACGG+AGG + Chr3:60345650-60345669 None:intergenic 50.0%
CAATCCTCCGTGGTTCAATG+AGG - Chr3:60345643-60345662 MsG0380014802.01.T01:intron 50.0%
CACACCTGGTTAGTATGTCG+CGG - Chr3:60345183-60345202 MsG0380014802.01.T01:intron 50.0%
CCAAATGCTGCTCTTCCAGA+AGG + Chr3:60348178-60348197 None:intergenic 50.0%
CTGCTCTTCCAGAAGGATCA+AGG + Chr3:60348171-60348190 None:intergenic 50.0%
CTTGTACTCGAGCAAAGACC+GGG - Chr3:60345604-60345623 MsG0380014802.01.T01:CDS 50.0%
GCCATTGTTGATCCTGCTTC+TGG - Chr3:60344941-60344960 MsG0380014802.01.T01:CDS 50.0%
GGGGTCACTTCCTTGTACAT+TGG - Chr3:60345398-60345417 MsG0380014802.01.T01:CDS 50.0%
GTAGATGGTACAATCCTCCG+TGG - Chr3:60345633-60345652 MsG0380014802.01.T01:intron 50.0%
GTATGTCGCGGTCTAGATTG+CGG - Chr3:60345195-60345214 MsG0380014802.01.T01:intron 50.0%
TAGACCGCGACATACTAACC+AGG + Chr3:60345190-60345209 None:intergenic 50.0%
TCACCAAGAAACATGCCGCA+AGG - Chr3:60347029-60347048 MsG0380014802.01.T01:CDS 50.0%
TCAGCAAGGCTAACAGTTCC+TGG - Chr3:60348082-60348101 MsG0380014802.01.T01:CDS 50.0%
TCTCTTCCAGCCTTAAGGTC+AGG + Chr3:60346151-60346170 None:intergenic 50.0%
TGTTGCGAGGGATGCTATAG+GGG - Chr3:60345379-60345398 MsG0380014802.01.T01:CDS 50.0%
TTAGGGTGCACCTGACCTTA+AGG - Chr3:60346138-60346157 MsG0380014802.01.T01:intron 50.0%
TTGCTCGAGTACAAGTGACC+AGG + Chr3:60345599-60345618 None:intergenic 50.0%
! AGAGGTTGATCACCAGAAGC+AGG + Chr3:60344956-60344975 None:intergenic 50.0%
! CCTTCTGGAAGAGCAGCATT+TGG - Chr3:60348175-60348194 MsG0380014802.01.T01:intron 50.0%
! GTGATGGAGTTGGCTATGGT+TGG - Chr3:60347586-60347605 MsG0380014802.01.T01:CDS 50.0%
!! TGTCACAGATTGAAGCACCG+TGG - Chr3:60344860-60344879 MsG0380014802.01.T01:three_prime_UTR 50.0%
CATGCAACACTAGCTCCTCC+AGG + Chr3:60348103-60348122 None:intergenic 55.0%
CTCGAGTACAAGTGACCAGG+TGG + Chr3:60345596-60345615 None:intergenic 55.0%
GCAAGGCTAACAGTTCCTGG+AGG - Chr3:60348085-60348104 MsG0380014802.01.T01:CDS 55.0%
GTCACTGCTAGATACCTGGC+TGG - Chr3:60345936-60345955 MsG0380014802.01.T01:CDS 55.0%
! TAGCAGCTTTTGTGCCAGCC+AGG + Chr3:60345953-60345972 None:intergenic 55.0%
ACCGTGGTCCAGACTGGAGT+GGG - Chr3:60344876-60344895 MsG0380014802.01.T01:exon 60.0%
GGTGCACCTGACCTTAAGGC+TGG - Chr3:60346142-60346161 MsG0380014802.01.T01:intron 60.0%
! TGGAGTGGGCTCCACCAACA+TGG - Chr3:60344890-60344909 MsG0380014802.01.T01:exon 60.0%
!! TGAAGCACCGTGGTCCAGAC+TGG - Chr3:60344870-60344889 MsG0380014802.01.T01:three_prime_UTR 60.0%
CACCGTGGTCCAGACTGGAG+TGG - Chr3:60344875-60344894 MsG0380014802.01.T01:exon 65.0%
CGCGGTCTAGATTGCGGTCG+TGG - Chr3:60345201-60345220 MsG0380014802.01.T01:intron 65.0%
GCCCACTCCAGTCTGGACCA+CGG + Chr3:60344880-60344899 None:intergenic 65.0%
TGGTGGAGCCCACTCCAGTC+TGG + Chr3:60344887-60344906 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 60344578 60348627 60344578 ID=MsG0380014802.01;Name=MsG0380014802.01
Chr3 mRNA 60344578 60348627 60344578 ID=MsG0380014802.01.T01;Parent=MsG0380014802.01;Name=MsG0380014802.01.T01;_AED=0.35;_eAED=0.36;_QI=0|0.91|0.92|1|1|1|13|315|569
Chr3 exon 60344578 60345126 60344578 ID=MsG0380014802.01.T01:exon:1808;Parent=MsG0380014802.01.T01
Chr3 exon 60345363 60345470 60345363 ID=MsG0380014802.01.T01:exon:1807;Parent=MsG0380014802.01.T01
Chr3 exon 60345564 60345650 60345564 ID=MsG0380014802.01.T01:exon:1806;Parent=MsG0380014802.01.T01
Chr3 exon 60345747 60345827 60345747 ID=MsG0380014802.01.T01:exon:1805;Parent=MsG0380014802.01.T01
Chr3 exon 60345915 60346049 60345915 ID=MsG0380014802.01.T01:exon:1804;Parent=MsG0380014802.01.T01
Chr3 exon 60346155 60346376 60346155 ID=MsG0380014802.01.T01:exon:1803;Parent=MsG0380014802.01.T01
Chr3 exon 60346983 60347063 60346983 ID=MsG0380014802.01.T01:exon:1802;Parent=MsG0380014802.01.T01
Chr3 exon 60347189 60347350 60347189 ID=MsG0380014802.01.T01:exon:1801;Parent=MsG0380014802.01.T01
Chr3 exon 60347484 60347677 60347484 ID=MsG0380014802.01.T01:exon:1800;Parent=MsG0380014802.01.T01
Chr3 exon 60347771 60347912 60347771 ID=MsG0380014802.01.T01:exon:1799;Parent=MsG0380014802.01.T01
Chr3 exon 60348015 60348110 60348015 ID=MsG0380014802.01.T01:exon:1798;Parent=MsG0380014802.01.T01
Chr3 exon 60348199 60348337 60348199 ID=MsG0380014802.01.T01:exon:1797;Parent=MsG0380014802.01.T01
Chr3 exon 60348599 60348627 60348599 ID=MsG0380014802.01.T01:exon:1796;Parent=MsG0380014802.01.T01
Chr3 CDS 60348599 60348627 60348599 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60348199 60348337 60348199 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60348015 60348110 60348015 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60347771 60347912 60347771 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60347484 60347677 60347484 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60347189 60347350 60347189 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60346983 60347063 60346983 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60346155 60346376 60346155 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60345915 60346049 60345915 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60345747 60345827 60345747 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60345564 60345650 60345564 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60345363 60345470 60345363 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 CDS 60344893 60345126 60344893 ID=MsG0380014802.01.T01:cds;Parent=MsG0380014802.01.T01
Chr3 three_prime_UTR 60344578 60344892 60344578 ID=MsG0380014802.01.T01:three_prime_utr;Parent=MsG0380014802.01.T01
Gene Sequence

>MsG0380014802.01.T01

ATGACACATTACATTGAGATTAAACAAAAATTGAAGCACCGTGGTCCAGACTGGAGTGGGCTCCACCAACATGGTGATAACTATTTGGCTCATCAAAGGTTAGCCATTGTTGATCCTGCTTCTGGTGATCAACCTCTCTTCAATGAAGACAAATCTATTATTGTCACGGTGAATGGAGAGATCTACAATCATGAAGACCTCAGGAAACAATTGCCTAATCACAAATTCCGTACACAATGTGACTGTGATGTTATTGCACACCTGTATGAGGAGTATGGAGAAAATTTTGTGGACATGTTGGATGGTATCTTTTCATTTGTTCTGCTGGATACTCGCGACAACAGTTTCATTGTTGCGAGGGATGCTATAGGGGTCACTTCCTTGTACATTGGTTGGGGACTAGATGGTTCTGTTTGGATTGCATCAGAATTAAAAGGGCTGAATGATGAATGTGAACATTTTGAAGTTTTTCCACCTGGTCACTTGTACTCGAGCAAAGACCGGGAGTTTCGTAGATGGTACAATCCTCCGTGGTTCAATGAGGCTATTATTCCAACAACCCCTTATGATCCTCTAGTTTTGAGGAACGCCTTTGAGAAGGCTGTGATAAAAAGGTTGATGACTGATGTGCCGTTCGGTGTTTTACTATCTGGAGGTTTGGATTCTTCATTGGTTGCAGCAGTCACTGCTAGATACCTGGCTGGCACAAAAGCTGCTAAGCAATGGGGAGCAAAATTACACTCATTCTGTGTAGGACTTAAGGGTGCACCTGACCTTAAGGCTGGAAGAGAAGTAGCAGACTTTTTAGGAACTGTCCATCATGAATTTCAGTTTACTATTCAGGATGGCATAGATGCAATTGAGGATGTCATTTATCATACAGAAACATATGATGTAACTACAATTAGGGCAGCAACACCTATGTTTCTGATGTCTCGAAAGATCAAATCATCAGGAGTCAAATGGGTGATTTCTGGAGAAGGATCTGATGAGATTTTTGGAGGGTATTTGTATTTCCATAAGGCACCAAACAAAGAAGAGTTTCACCAAGAAACATGCCGCAAGATCAAAGCTCTTCATAGGTATGACTGTTTGAGAGCCAATAAATCAACATATGCATGGGGTCTAGAAGCTAGAGTACCATTTTTGGACAAGGATTTCATCAAAGTTGCAATGGACATTGATCCTGAGTACAAAATGATAAAACATGAAGAAGGAAGAATTGAGAAATGGATACTAAGGAAGGCTTTTGATGATGAAGAGAATCCTTACCTTCCTAAGCACATTTTATATAGGCAGAAGGAACAGTTCAGTGATGGAGTTGGCTATGGTTGGATTGATGGTATTAAGGACCATGCTGCAAAACATGTCACTGATAGAATGATGCTCAATGCTTCTCACATCTTTCCTTTCAACACTCCTCTTACCAAAGAAGCATATTACTATAGAATGATCTTTGAGAGGATTTTCCCTCAGAACTCAGCAAGGCTAACAGTTCCTGGAGGAGCTAGTGTTGCATGTAGCACAGAGAAAGCAATTGAGTGGGATGCTTCTTGGTCAAGCAACCTTGATCCTTCTGGAAGAGCAGCATTTGGAGTTCATAATTCAGCTTATGAAAACCAAGTCAACTCAGTTGCCAAAACTGTAGAGCCAGAGAAGATTATACCAAAGATGGAAATTTCTAATCTTGGAGTTGCCATTCAAAGCTAA

Protein sequence

>MsG0380014802.01.T01

MTHYIEIKQKLKHRGPDWSGLHQHGDNYLAHQRLAIVDPASGDQPLFNEDKSIIVTVNGEIYNHEDLRKQLPNHKFRTQCDCDVIAHLYEEYGENFVDMLDGIFSFVLLDTRDNSFIVARDAIGVTSLYIGWGLDGSVWIASELKGLNDECEHFEVFPPGHLYSSKDREFRRWYNPPWFNEAIIPTTPYDPLVLRNAFEKAVIKRLMTDVPFGVLLSGGLDSSLVAAVTARYLAGTKAAKQWGAKLHSFCVGLKGAPDLKAGREVADFLGTVHHEFQFTIQDGIDAIEDVIYHTETYDVTTIRAATPMFLMSRKIKSSGVKWVISGEGSDEIFGGYLYFHKAPNKEEFHQETCRKIKALHRYDCLRANKSTYAWGLEARVPFLDKDFIKVAMDIDPEYKMIKHEEGRIEKWILRKAFDDEENPYLPKHILYRQKEQFSDGVGYGWIDGIKDHAAKHVTDRMMLNASHIFPFNTPLTKEAYYYRMIFERIFPQNSARLTVPGGASVACSTEKAIEWDASWSSNLDPSGRAAFGVHNSAYENQVNSVAKTVEPEKIIPKMEISNLGVAIQS*