Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023105.01.T03 | RHN42672.1 | 98.969 | 388 | 4 | 0 | 1 | 388 | 92 | 479 | 0 | 796 |
| MsG0480023105.01.T01 | RHN42672.1 | 93.991 | 466 | 9 | 1 | 1 | 447 | 14 | 479 | 0 | 892 |
| MsG0480023105.01.T02 | RHN42672.1 | 97.854 | 466 | 10 | 0 | 1 | 466 | 14 | 479 | 0 | 943 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023105.01.T01 | F4KGE8 | 29.803 | 406 | 249 | 7 | 60 | 439 | 160 | 555 | 1.28E-43 | 164 |
| MsG0480023105.01.T02 | F4KGE8 | 29.803 | 406 | 249 | 7 | 79 | 458 | 160 | 555 | 1.66E-43 | 164 |
| MsG0480023105.01.T03 | F4KGE8 | 29.803 | 406 | 249 | 7 | 1 | 380 | 160 | 555 | 8.94E-44 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023105.01.T01 | A0A396GNK6 | 93.991 | 466 | 9 | 1 | 1 | 447 | 14 | 479 | 0.0 | 892 |
| MsG0480023105.01.T02 | A0A396GNK6 | 97.854 | 466 | 10 | 0 | 1 | 466 | 14 | 479 | 0.0 | 943 |
| MsG0480023105.01.T03 | A0A396GNK6 | 98.969 | 388 | 4 | 0 | 1 | 388 | 92 | 479 | 0.0 | 796 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0480023105.01 | 0.815061 | 1.121061e-51 | 7.649584e-49 |
| MsG0180000001.01 | MsG0480023105.01 | 0.801938 | 7.108103e-49 | 3.437806e-46 |
| MsG0180000360.01 | MsG0480023105.01 | 0.826810 | 2.210827e-54 | 2.095536e-51 |
| MsG0180001117.01 | MsG0480023105.01 | 0.805304 | 1.423827e-49 | 7.506831e-47 |
| MsG0180001237.01 | MsG0480023105.01 | 0.811072 | 8.403688e-51 | 5.152042e-48 |
| MsG0180001294.01 | MsG0480023105.01 | 0.821221 | 4.531306e-53 | 3.664539e-50 |
| MsG0180001565.01 | MsG0480023105.01 | 0.816821 | 4.537706e-52 | 3.249236e-49 |
| MsG0180003444.01 | MsG0480023105.01 | 0.809718 | 1.647452e-50 | 9.745127e-48 |
| MsG0180004147.01 | MsG0480023105.01 | 0.819855 | 9.327341e-53 | 7.261793e-50 |
| MsG0180004258.01 | MsG0480023105.01 | 0.815037 | 1.134979e-51 | 7.739801e-49 |
| MsG0180006023.01 | MsG0480023105.01 | 0.831110 | 2.010009e-55 | 2.160003e-52 |
| MsG0180006235.01 | MsG0480023105.01 | 0.820253 | 7.563463e-53 | 5.953991e-50 |
| MsG0280010868.01 | MsG0480023105.01 | 0.816941 | 4.266175e-52 | 3.065074e-49 |
| MsG0380012471.01 | MsG0480023105.01 | 0.800984 | 1.114982e-48 | 5.264467e-46 |
| MsG0480018641.01 | MsG0480023105.01 | 0.802077 | 6.657434e-49 | 3.231260e-46 |
| MsG0480019635.01 | MsG0480023105.01 | 0.806340 | 8.625218e-50 | 4.669802e-47 |
| MsG0480020242.01 | MsG0480023105.01 | 0.814765 | 1.303843e-51 | 8.825842e-49 |
| MsG0480021225.01 | MsG0480023105.01 | 0.814012 | 1.913361e-51 | 1.269105e-48 |
| MsG0480022094.01 | MsG0480023105.01 | 0.809237 | 2.089746e-50 | 1.220444e-47 |
| MsG0480022115.01 | MsG0480023105.01 | 0.809044 | 2.298030e-50 | 1.335123e-47 |
| MsG0480022167.01 | MsG0480023105.01 | 0.825633 | 4.213944e-54 | 3.862397e-51 |
| MsG0480022325.01 | MsG0480023105.01 | 0.820398 | 7.005852e-53 | 5.537559e-50 |
| MsG0480023013.01 | MsG0480023105.01 | 0.846410 | 2.210570e-59 | 3.801723e-56 |
| MsG0480023105.01 | MsG0480023421.01 | 0.818852 | 1.579071e-52 | 1.195641e-49 |
| MsG0480023105.01 | MsG0480023500.01 | 0.826611 | 2.466347e-54 | 2.324391e-51 |
| MsG0480023105.01 | MsG0580024035.01 | 0.800178 | 1.627897e-48 | 7.529889e-46 |
| MsG0480023105.01 | MsG0580024478.01 | 0.834353 | 3.148588e-56 | 3.727056e-53 |
| MsG0480023105.01 | MsG0580024618.01 | 0.814790 | 1.287385e-51 | 8.720683e-49 |
| MsG0480023105.01 | MsG0580025072.01 | 0.813082 | 3.064687e-51 | 1.981982e-48 |
| MsG0480023105.01 | MsG0580025352.01 | 0.833344 | 5.629688e-56 | 6.465789e-53 |
| MsG0480023105.01 | MsG0580027954.01 | 0.805544 | 1.268033e-49 | 6.726768e-47 |
| MsG0480023105.01 | MsG0580029148.01 | 0.819155 | 1.347396e-52 | 1.028691e-49 |
| MsG0480023105.01 | MsG0680030436.01 | 0.813649 | 2.300173e-51 | 1.510745e-48 |
| MsG0480023105.01 | MsG0680030740.01 | 0.839375 | 1.645759e-57 | 2.268420e-54 |
| MsG0480023105.01 | MsG0680031133.01 | 0.808396 | 3.161135e-50 | 1.805550e-47 |
| MsG0480023105.01 | MsG0780036235.01 | 0.810924 | 9.049826e-51 | 5.526708e-48 |
| MsG0480023105.01 | MsG0780038837.01 | 0.850621 | 1.508240e-60 | 2.972111e-57 |
| MsG0480023105.01 | MsG0780039622.01 | -0.808421 | 3.122468e-50 | 1.784606e-47 |
| MsG0480023105.01 | MsG0780039950.01 | 0.805696 | 1.178556e-49 | 6.277024e-47 |
| MsG0480023105.01 | MsG0780040482.01 | 0.822908 | 1.841089e-53 | 1.561758e-50 |
| MsG0480023105.01 | MsG0780040488.01 | 0.815047 | 1.129181e-51 | 7.702088e-49 |
| MsG0480023105.01 | MsG0780040541.01 | 0.800740 | 1.250608e-48 | 5.867990e-46 |
| MsG0480023105.01 | MsG0780040880.01 | 0.822942 | 1.807865e-53 | 1.535039e-50 |
| MsG0480023105.01 | MsG0880042583.01 | 0.817950 | 2.527167e-52 | 1.866374e-49 |
| MsG0480023105.01 | MsG0880043252.01 | 0.820178 | 7.868065e-53 | 6.181315e-50 |
| MsG0480023105.01 | MsG0880046086.01 | 0.808049 | 3.747864e-50 | 2.121068e-47 |
| MsG0480023105.01 | MsG0880046165.01 | 0.818354 | 2.048021e-52 | 1.529573e-49 |
| MsG0480023105.01 | MsG0880046669.01 | 0.801571 | 8.456007e-49 | 4.051789e-46 |
| MsG0480023105.01 | MsG0880046762.01 | 0.851530 | 8.358922e-61 | 1.696868e-57 |
| MsG0480023105.01 | MsG0880047120.01 | 0.802980 | 4.335484e-49 | 2.153181e-46 |
| MsG0480023105.01 | MsG0880047192.01 | 0.805690 | 1.181744e-49 | 6.293041e-47 |
| MsG0380015793.01 | MsG0480023105.01 | -0.831440 | 1.667527e-55 | 1.809640e-52 |
| MsG0380016102.01 | MsG0480023105.01 | 0.828450 | 8.931090e-55 | 8.880712e-52 |
| MsG0380016994.01 | MsG0480023105.01 | 0.836983 | 6.794039e-57 | 8.703731e-54 |
| MsG0380017240.01 | MsG0480023105.01 | 0.816521 | 5.298784e-52 | 3.763098e-49 |
| MsG0480018230.01 | MsG0480023105.01 | 0.812290 | 4.567417e-51 | 2.892592e-48 |
| MsG0280007089.01 | MsG0480023105.01 | 0.820323 | 7.286787e-53 | 5.747173e-50 |
| MsG0280007609.01 | MsG0480023105.01 | 0.863218 | 2.912993e-64 | 8.764394e-61 |
| MsG0280007764.01 | MsG0480023105.01 | 0.806354 | 8.568829e-50 | 4.640862e-47 |
| MsG0280007790.01 | MsG0480023105.01 | 0.844899 | 5.679489e-59 | 9.302881e-56 |
| MsG0280008280.01 | MsG0480023105.01 | 0.819849 | 9.357480e-53 | 7.283973e-50 |
| MsG0280008614.01 | MsG0480023105.01 | 0.805890 | 1.073030e-49 | 5.743224e-47 |
| MsG0280008885.01 | MsG0480023105.01 | 0.837028 | 6.617214e-57 | 8.488721e-54 |
| MsG0280009241.01 | MsG0480023105.01 | 0.820464 | 6.763991e-53 | 5.356108e-50 |
| MsG0280009514.01 | MsG0480023105.01 | 0.829234 | 5.768545e-55 | 5.869215e-52 |
| MsG0280010002.01 | MsG0480023105.01 | 0.832725 | 8.024352e-56 | 9.046440e-53 |
| MsG0280010389.01 | MsG0480023105.01 | 0.809911 | 1.497582e-50 | 8.903421e-48 |
PPI
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023105.01.T03 | MTR_8g087400 | 98.969 | 388 | 4 | 0 | 1 | 388 | 79 | 466 | 0.0 | 795 |
| MsG0480023105.01.T03 | MTR_2g075910 | 48.564 | 383 | 191 | 3 | 2 | 380 | 73 | 453 | 1.58e-119 | 355 |
| MsG0480023105.01.T03 | MTR_8g059485 | 47.792 | 385 | 186 | 6 | 2 | 381 | 63 | 437 | 7.45e-115 | 342 |
| MsG0480023105.01.T03 | MTR_8g059485 | 47.792 | 385 | 186 | 6 | 2 | 381 | 72 | 446 | 9.76e-115 | 342 |
| MsG0480023105.01.T03 | MTR_4g025420 | 39.241 | 395 | 210 | 5 | 1 | 381 | 35 | 413 | 7.95e-95 | 290 |
| MsG0480023105.01.T03 | MTR_0178s0030 | 34.351 | 393 | 229 | 6 | 4 | 381 | 145 | 523 | 3.06e-64 | 214 |
| MsG0480023105.01.T03 | MTR_3g462150 | 28.967 | 397 | 255 | 5 | 1 | 380 | 91 | 477 | 7.01e-52 | 180 |
| MsG0480023105.01.T03 | MTR_5g075180 | 30.990 | 384 | 239 | 5 | 4 | 387 | 89 | 446 | 1.22e-50 | 176 |
| MsG0480023105.01.T01 | MTR_8g087400 | 93.991 | 466 | 9 | 1 | 1 | 447 | 1 | 466 | 0.0 | 891 |
| MsG0480023105.01.T01 | MTR_2g075910 | 44.639 | 457 | 231 | 8 | 1 | 439 | 1 | 453 | 4.19e-122 | 364 |
| MsG0480023105.01.T01 | MTR_8g059485 | 44.866 | 448 | 228 | 9 | 1 | 440 | 1 | 437 | 1.28e-118 | 354 |
| MsG0480023105.01.T01 | MTR_8g059485 | 44.866 | 448 | 228 | 9 | 1 | 440 | 10 | 446 | 2.33e-118 | 354 |
| MsG0480023105.01.T01 | MTR_4g025420 | 37.383 | 428 | 238 | 5 | 27 | 440 | 2 | 413 | 1.62e-95 | 294 |
| MsG0480023105.01.T01 | MTR_0178s0030 | 33.656 | 413 | 245 | 6 | 43 | 440 | 125 | 523 | 3.28e-64 | 216 |
| MsG0480023105.01.T01 | MTR_5g075180 | 29.806 | 463 | 279 | 9 | 4 | 446 | 10 | 446 | 8.07e-52 | 181 |
| MsG0480023105.01.T01 | MTR_3g462150 | 28.967 | 397 | 255 | 5 | 60 | 439 | 91 | 477 | 2.33e-51 | 181 |
| MsG0480023105.01.T02 | MTR_8g087400 | 97.854 | 466 | 10 | 0 | 1 | 466 | 1 | 466 | 0.0 | 942 |
| MsG0480023105.01.T02 | MTR_2g075910 | 44.156 | 462 | 245 | 6 | 1 | 458 | 1 | 453 | 1.25e-121 | 363 |
| MsG0480023105.01.T02 | MTR_8g059485 | 43.226 | 465 | 230 | 9 | 1 | 459 | 10 | 446 | 5.86e-117 | 351 |
| MsG0480023105.01.T02 | MTR_8g059485 | 43.226 | 465 | 230 | 9 | 1 | 459 | 1 | 437 | 6.38e-117 | 350 |
| MsG0480023105.01.T02 | MTR_4g025420 | 39.000 | 400 | 214 | 5 | 74 | 459 | 30 | 413 | 1.22e-94 | 292 |
| MsG0480023105.01.T02 | MTR_0178s0030 | 33.656 | 413 | 245 | 6 | 62 | 459 | 125 | 523 | 5.90e-64 | 216 |
| MsG0480023105.01.T02 | MTR_3g462150 | 28.967 | 397 | 255 | 5 | 79 | 458 | 91 | 477 | 4.29e-51 | 180 |
| MsG0480023105.01.T02 | MTR_5g075180 | 30.526 | 475 | 279 | 12 | 4 | 465 | 10 | 446 | 3.03e-50 | 177 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480023105.01.T03 | AT1G29300 | 57.360 | 394 | 143 | 4 | 1 | 388 | 85 | 459 | 1.61e-153 | 441 |
| MsG0480023105.01.T03 | AT1G53380 | 49.231 | 390 | 186 | 3 | 1 | 382 | 67 | 452 | 2.69e-127 | 374 |
| MsG0480023105.01.T03 | AT1G53380 | 49.231 | 390 | 186 | 3 | 1 | 382 | 67 | 452 | 2.69e-127 | 374 |
| MsG0480023105.01.T03 | AT1G53380 | 49.231 | 390 | 186 | 3 | 1 | 382 | 67 | 452 | 2.69e-127 | 374 |
| MsG0480023105.01.T03 | AT1G53380 | 49.231 | 390 | 186 | 3 | 1 | 382 | 67 | 452 | 2.69e-127 | 374 |
| MsG0480023105.01.T03 | AT1G53380 | 49.231 | 390 | 186 | 3 | 1 | 382 | 67 | 452 | 2.69e-127 | 374 |
| MsG0480023105.01.T03 | AT3G14870 | 48.579 | 387 | 188 | 5 | 1 | 381 | 81 | 462 | 7.89e-124 | 366 |
| MsG0480023105.01.T03 | AT3G14870 | 48.579 | 387 | 188 | 5 | 1 | 381 | 81 | 462 | 7.89e-124 | 366 |
| MsG0480023105.01.T03 | AT3G14870 | 48.579 | 387 | 188 | 5 | 1 | 381 | 81 | 462 | 7.89e-124 | 366 |
| MsG0480023105.01.T03 | AT3G14870 | 48.579 | 387 | 188 | 5 | 1 | 381 | 82 | 463 | 8.59e-124 | 366 |
| MsG0480023105.01.T03 | AT3G14870 | 48.579 | 387 | 188 | 5 | 1 | 381 | 85 | 466 | 1.11e-123 | 366 |
| MsG0480023105.01.T03 | AT2G45260 | 40.609 | 394 | 215 | 4 | 1 | 383 | 36 | 421 | 2.20e-97 | 297 |
| MsG0480023105.01.T03 | AT3G60680 | 34.625 | 387 | 233 | 5 | 3 | 381 | 120 | 494 | 1.16e-73 | 238 |
| MsG0480023105.01.T03 | AT2G30380 | 34.031 | 382 | 201 | 8 | 5 | 381 | 76 | 411 | 4.12e-57 | 192 |
| MsG0480023105.01.T03 | AT4G34080 | 37.037 | 270 | 159 | 3 | 1 | 259 | 12 | 281 | 2.84e-54 | 181 |
| MsG0480023105.01.T03 | AT4G33320 | 36.122 | 263 | 156 | 4 | 1 | 251 | 12 | 274 | 3.87e-49 | 168 |
| MsG0480023105.01.T03 | AT5G58960 | 29.803 | 406 | 249 | 7 | 1 | 380 | 85 | 480 | 1.78e-45 | 163 |
| MsG0480023105.01.T03 | AT5G58960 | 29.803 | 406 | 249 | 7 | 1 | 380 | 85 | 480 | 1.78e-45 | 163 |
| MsG0480023105.01.T03 | AT5G58960 | 29.803 | 406 | 249 | 7 | 1 | 380 | 160 | 555 | 9.11e-45 | 162 |
| MsG0480023105.01.T03 | AT2G32130 | 57.724 | 123 | 52 | 0 | 2 | 124 | 34 | 156 | 1.56e-43 | 149 |
| MsG0480023105.01.T03 | AT4G36100 | 44.762 | 105 | 53 | 2 | 1 | 100 | 12 | 116 | 1.16e-20 | 90.5 |
| MsG0480023105.01.T01 | AT1G29300 | 52.183 | 481 | 174 | 8 | 1 | 447 | 1 | 459 | 4.27e-163 | 468 |
| MsG0480023105.01.T01 | AT1G53380 | 45.077 | 457 | 230 | 5 | 1 | 441 | 1 | 452 | 5.47e-132 | 389 |
| MsG0480023105.01.T01 | AT1G53380 | 45.077 | 457 | 230 | 5 | 1 | 441 | 1 | 452 | 5.47e-132 | 389 |
| MsG0480023105.01.T01 | AT1G53380 | 45.077 | 457 | 230 | 5 | 1 | 441 | 1 | 452 | 5.47e-132 | 389 |
| MsG0480023105.01.T01 | AT1G53380 | 45.077 | 457 | 230 | 5 | 1 | 441 | 1 | 452 | 5.47e-132 | 389 |
| MsG0480023105.01.T01 | AT1G53380 | 45.077 | 457 | 230 | 5 | 1 | 441 | 1 | 452 | 5.47e-132 | 389 |
| MsG0480023105.01.T01 | AT3G14870 | 44.255 | 470 | 224 | 8 | 1 | 440 | 5 | 466 | 1.89e-128 | 380 |
| MsG0480023105.01.T01 | AT3G14870 | 44.681 | 470 | 222 | 9 | 1 | 440 | 1 | 462 | 2.09e-128 | 380 |
| MsG0480023105.01.T01 | AT3G14870 | 44.681 | 470 | 222 | 9 | 1 | 440 | 1 | 462 | 2.09e-128 | 380 |
| MsG0480023105.01.T01 | AT3G14870 | 44.681 | 470 | 222 | 9 | 1 | 440 | 1 | 462 | 2.09e-128 | 380 |
| MsG0480023105.01.T01 | AT3G14870 | 44.255 | 470 | 224 | 8 | 1 | 440 | 2 | 463 | 2.11e-128 | 380 |
| MsG0480023105.01.T01 | AT2G45260 | 39.019 | 428 | 239 | 5 | 26 | 442 | 5 | 421 | 7.94e-98 | 300 |
| MsG0480023105.01.T01 | AT3G60680 | 34.625 | 387 | 233 | 5 | 62 | 440 | 120 | 494 | 3.33e-73 | 239 |
| MsG0480023105.01.T01 | AT2G30380 | 32.915 | 398 | 216 | 8 | 48 | 440 | 60 | 411 | 6.79e-57 | 193 |
| MsG0480023105.01.T01 | AT4G34080 | 36.727 | 275 | 163 | 3 | 55 | 318 | 7 | 281 | 1.80e-54 | 183 |
| MsG0480023105.01.T01 | AT4G33320 | 35.821 | 268 | 160 | 4 | 55 | 310 | 7 | 274 | 3.93e-49 | 169 |
| MsG0480023105.01.T01 | AT5G58960 | 29.803 | 406 | 249 | 7 | 60 | 439 | 85 | 480 | 3.58e-45 | 164 |
| MsG0480023105.01.T01 | AT5G58960 | 29.803 | 406 | 249 | 7 | 60 | 439 | 85 | 480 | 3.58e-45 | 164 |
| MsG0480023105.01.T01 | AT5G58960 | 29.803 | 406 | 249 | 7 | 60 | 439 | 160 | 555 | 1.31e-44 | 164 |
| MsG0480023105.01.T01 | AT2G32130 | 57.724 | 123 | 52 | 0 | 61 | 183 | 34 | 156 | 4.40e-43 | 149 |
| MsG0480023105.01.T01 | AT4G36100 | 43.636 | 110 | 57 | 2 | 55 | 159 | 7 | 116 | 4.52e-21 | 92.0 |
| MsG0480023105.01.T02 | AT1G29300 | 53.846 | 481 | 185 | 9 | 1 | 466 | 1 | 459 | 2.28e-167 | 479 |
| MsG0480023105.01.T02 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 5 | 466 | 2.64e-130 | 385 |
| MsG0480023105.01.T02 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 2 | 463 | 3.35e-130 | 385 |
| MsG0480023105.01.T02 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 1 | 462 | 3.43e-130 | 385 |
| MsG0480023105.01.T02 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 1 | 462 | 3.43e-130 | 385 |
| MsG0480023105.01.T02 | AT3G14870 | 44.872 | 468 | 243 | 8 | 1 | 459 | 1 | 462 | 3.43e-130 | 385 |
| MsG0480023105.01.T02 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.15e-128 | 380 |
| MsG0480023105.01.T02 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.15e-128 | 380 |
| MsG0480023105.01.T02 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.15e-128 | 380 |
| MsG0480023105.01.T02 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.15e-128 | 380 |
| MsG0480023105.01.T02 | AT1G53380 | 43.803 | 468 | 239 | 5 | 1 | 460 | 1 | 452 | 3.15e-128 | 380 |
| MsG0480023105.01.T02 | AT2G45260 | 40.351 | 399 | 219 | 4 | 74 | 461 | 31 | 421 | 2.16e-97 | 300 |
| MsG0480023105.01.T02 | AT3G60680 | 34.625 | 387 | 233 | 5 | 81 | 459 | 120 | 494 | 5.23e-73 | 239 |
| MsG0480023105.01.T02 | AT2G30380 | 32.915 | 398 | 216 | 8 | 67 | 459 | 60 | 411 | 1.08e-56 | 193 |
| MsG0480023105.01.T02 | AT4G34080 | 36.727 | 275 | 163 | 3 | 74 | 337 | 7 | 281 | 3.50e-54 | 183 |
| MsG0480023105.01.T02 | AT4G33320 | 35.821 | 268 | 160 | 4 | 74 | 329 | 7 | 274 | 6.45e-49 | 169 |
| MsG0480023105.01.T02 | AT5G58960 | 29.803 | 406 | 249 | 7 | 79 | 458 | 85 | 480 | 4.25e-45 | 164 |
| MsG0480023105.01.T02 | AT5G58960 | 29.803 | 406 | 249 | 7 | 79 | 458 | 85 | 480 | 4.25e-45 | 164 |
| MsG0480023105.01.T02 | AT5G58960 | 29.803 | 406 | 249 | 7 | 79 | 458 | 160 | 555 | 1.69e-44 | 164 |
| MsG0480023105.01.T02 | AT2G32130 | 57.724 | 123 | 52 | 0 | 80 | 202 | 34 | 156 | 6.46e-43 | 149 |
| MsG0480023105.01.T02 | AT4G36100 | 43.636 | 110 | 57 | 2 | 74 | 178 | 7 | 116 | 6.34e-21 | 92.0 |
Find 58 sgRNAs with CRISPR-Local
Find 78 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTGTTCATTGCTGATTT+TGG | 0.079747 | 4:+81037499 | None:intergenic |
| TTCTAATTCCGGCGAGTTTC+GGG | 0.120775 | 4:-81036228 | MsG0480023105.01.T02:CDS |
| ATGGACAACTTGATGATATT+TGG | 0.163563 | 4:+81036508 | None:intergenic |
| ATTCTAATTCCGGCGAGTTT+CGG | 0.208130 | 4:-81036229 | MsG0480023105.01.T02:CDS |
| ATTTGTCAAAATAGTGATTT+TGG | 0.234573 | 4:+81036609 | None:intergenic |
| GATTCTATTGATTCTAATTC+CGG | 0.300156 | 4:-81036239 | MsG0480023105.01.T02:CDS |
| CGGAGATGGCAAAGCGCGTT+TGG | 0.317538 | 4:-81036391 | MsG0480023105.01.T02:CDS |
| TTCTCCTTGAAGCTTCTTGA+TGG | 0.321429 | 4:+81037024 | None:intergenic |
| CTTCTTGATGGTGATTTCAT+AGG | 0.327494 | 4:+81037036 | None:intergenic |
| TTCTTATTGATCTCAAAGTA+TGG | 0.329293 | 4:+81036834 | None:intergenic |
| GAGTCAGGTTTATCTGTCTT+TGG | 0.330222 | 4:-81036156 | MsG0480023105.01.T02:CDS |
| CAGAGGAAGCTAGTGAATTC+TGG | 0.337395 | 4:-81036449 | MsG0480023105.01.T02:CDS |
| TCAAGTTGTCCATGCTAAAA+TGG | 0.340049 | 4:-81036498 | MsG0480023105.01.T02:CDS |
| GAAACTTATGATTGAAGAAA+TGG | 0.349019 | 4:-81036804 | MsG0480023105.01.T02:CDS |
| TCAGTTTCAACTTCATGTTC+AGG | 0.353607 | 4:-81036263 | MsG0480023105.01.T02:CDS |
| AAAATGGAGTGTTCTTTGTT+TGG | 0.368125 | 4:-81036482 | MsG0480023105.01.T02:CDS |
| AAGAAATGGAATCAGCAAAC+TGG | 0.369176 | 4:-81036790 | MsG0480023105.01.T02:CDS |
| CGTTTGGACACTGCATTACT+TGG | 0.373882 | 4:-81036375 | MsG0480023105.01.T02:CDS |
| GATTCAACATTGAAAGTTCA+AGG | 0.402308 | 4:+81036882 | None:intergenic |
| AACTTGGCAAAAGATGAGTT+TGG | 0.414833 | 4:+81036539 | None:intergenic |
| TTCTAACCTTGTTCTTCTGT+TGG | 0.416097 | 4:+81037314 | None:intergenic |
| GGTTAGAAACAAAGCAGTTA+TGG | 0.418035 | 4:-81037299 | MsG0480023105.01.T02:CDS |
| GGTTTGGTGAAAACTGCATT+TGG | 0.434711 | 4:+81036737 | None:intergenic |
| AAAACAACGATGACTTGGTT+TGG | 0.448235 | 4:+81036721 | None:intergenic |
| GTTTGCATAACAATGTTTGA+AGG | 0.448726 | 4:-81036683 | MsG0480023105.01.T02:CDS |
| ATCATATGCAGAACTTCAAA+TGG | 0.451722 | 4:-81037230 | MsG0480023105.01.T02:CDS |
| TAGGTTCTCTGAGGTTTACA+TGG | 0.451972 | 4:-81036303 | MsG0480023105.01.T02:CDS |
| ATCACCATCAAGAAGCTTCA+AGG | 0.452355 | 4:-81037028 | MsG0480023105.01.T02:CDS |
| CAGAATTCACTAGCTTCCTC+TGG | 0.453524 | 4:+81036450 | None:intergenic |
| CAGTTTCAACTTCATGTTCA+GGG | 0.460825 | 4:-81036262 | MsG0480023105.01.T02:CDS |
| TGTATTGAATCATTGTTGTA+AGG | 0.470099 | 4:+81037199 | None:intergenic |
| TAAGACAGTGATACAGAGTC+AGG | 0.472174 | 4:-81036171 | MsG0480023105.01.T02:CDS |
| TCAGGTTTATCTGTCTTTGG+TGG | 0.472612 | 4:-81036153 | MsG0480023105.01.T02:CDS |
| TTCAGGTCAAGAAGAATACT+AGG | 0.473719 | 4:-81036322 | MsG0480023105.01.T02:CDS |
| CCATCTCAGAATTGAAAAGA+AGG | 0.510329 | 4:-81037141 | MsG0480023105.01.T02:CDS |
| AAAGCAAAACAACGATGACT+TGG | 0.515541 | 4:+81036716 | None:intergenic |
| AGAAATGGAATCAGCAAACT+GGG | 0.539408 | 4:-81036789 | MsG0480023105.01.T02:CDS |
| TTTGGTGAATATTGTGAAGA+GGG | 0.541008 | 4:+81036627 | None:intergenic |
| CAAAATCAGCAATGAACAAG+AGG | 0.553083 | 4:-81037498 | MsG0480023105.01.T02:CDS |
| TGGTGAAAACTGCATTTGGA+TGG | 0.559887 | 4:+81036741 | None:intergenic |
| GTGGTGCCTGGTTTCAACAT+TGG | 0.564074 | 4:-81036194 | MsG0480023105.01.T02:CDS |
| TAATTCCGGCGAGTTTCGGG+TGG | 0.572386 | 4:-81036225 | MsG0480023105.01.T02:CDS |
| AGCAGCTGATCAAGCAGTGG+TGG | 0.584305 | 4:-81037176 | MsG0480023105.01.T02:CDS |
| GAAAACCACCCGAAACTCGC+CGG | 0.587240 | 4:+81036220 | None:intergenic |
| ATTTGATGGTGATCTGTGAA+AGG | 0.594388 | 4:+81037355 | None:intergenic |
| AGTTTCAACTTCATGTTCAG+GGG | 0.594405 | 4:-81036261 | MsG0480023105.01.T02:CDS |
| CAACTCACATCTCAAAGTGA+AGG | 0.600233 | 4:-81037389 | MsG0480023105.01.T02:CDS |
| TGTTTGGAAATTTGAACCAG+AGG | 0.621071 | 4:-81036466 | MsG0480023105.01.T02:CDS |
| ATTTGCAAAGACATTCCAGA+AGG | 0.624146 | 4:-81037467 | MsG0480023105.01.T02:CDS |
| TTATGGAGGCTCTAATAGCA+AGG | 0.629498 | 4:-81037282 | MsG0480023105.01.T02:CDS |
| AGGAAGCTAGTGAATTCTGG+AGG | 0.632294 | 4:-81036446 | MsG0480023105.01.T02:CDS |
| GCTAGCATTATAGTAACTTG+AGG | 0.633614 | 4:+81037091 | None:intergenic |
| GTCTTACCAATGTTGAAACC+AGG | 0.633731 | 4:+81036188 | None:intergenic |
| TAGAAACAAAGCAGTTATGG+AGG | 0.646650 | 4:-81037296 | MsG0480023105.01.T02:CDS |
| GAAGAATACTAGGTTCTCTG+AGG | 0.672182 | 4:-81036312 | MsG0480023105.01.T02:CDS |
| GGAAGCTAGTGAATTCTGGA+GGG | 0.675270 | 4:-81036445 | MsG0480023105.01.T02:CDS |
| ACAAGCAGCTGATCAAGCAG+TGG | 0.679340 | 4:-81037179 | MsG0480023105.01.T02:CDS |
| TAAGCACCAACAGAAGAACA+AGG | 0.710444 | 4:-81037320 | MsG0480023105.01.T02:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAATTGCTTCAAATAA+TGG | - | Chr4:81036223-81036242 | MsG0480023105.01.T02:CDS | 20.0% |
| !!! | ATATTTGGATTTTAGAAACT+TGG | + | Chr4:81037127-81037146 | None:intergenic | 20.0% |
| !!! | ATTTGTCAAAATAGTGATTT+TGG | + | Chr4:81037041-81037060 | None:intergenic | 20.0% |
| !!! | TACTATTAGTTTTCATTTGA+TGG | + | Chr4:81036309-81036328 | None:intergenic | 20.0% |
| ! | GAAACTTATGATTGAAGAAA+TGG | - | Chr4:81036843-81036862 | MsG0480023105.01.T02:CDS | 25.0% |
| ! | TGTATTGAATCATTGTTGTA+AGG | + | Chr4:81036451-81036470 | None:intergenic | 25.0% |
| ! | TTCTTATTGATCTCAAAGTA+TGG | + | Chr4:81036816-81036835 | None:intergenic | 25.0% |
| !!! | ACTATTTTGACAAATTCAAG+AGG | - | Chr4:81037046-81037065 | MsG0480023105.01.T02:CDS | 25.0% |
| !!! | GATTCTATTGATTCTAATTC+CGG | - | Chr4:81037408-81037427 | MsG0480023105.01.T02:CDS | 25.0% |
| !!! | TTGTTTTCTAAGTACTGTTT+TGG | + | Chr4:81037087-81037106 | None:intergenic | 25.0% |
| ATCATATGCAGAACTTCAAA+TGG | - | Chr4:81036417-81036436 | MsG0480023105.01.T02:CDS | 30.0% | |
| GATTCAACATTGAAAGTTCA+AGG | + | Chr4:81036768-81036787 | None:intergenic | 30.0% | |
| GTTTGCATAACAATGTTTGA+AGG | - | Chr4:81036964-81036983 | MsG0480023105.01.T02:CDS | 30.0% | |
| TTTGGTGAATATTGTGAAGA+GGG | + | Chr4:81037023-81037042 | None:intergenic | 30.0% | |
| ! | AAAATGGAGTGTTCTTTGTT+TGG | - | Chr4:81037165-81037184 | MsG0480023105.01.T02:CDS | 30.0% |
| ! | AGAAGATGTTAGCATTTTTC+AGG | - | Chr4:81037308-81037327 | MsG0480023105.01.T02:CDS | 30.0% |
| ! | ATGGACAACTTGATGATATT+TGG | + | Chr4:81037142-81037161 | None:intergenic | 30.0% |
| ! | TTCTGCATATGATGCTTTTA+TGG | + | Chr4:81036410-81036429 | None:intergenic | 30.0% |
| ! | TTTTGGTGAATATTGTGAAG+AGG | + | Chr4:81037024-81037043 | None:intergenic | 30.0% |
| !!! | ACTCATCAAGTTTTTTTCTG+AGG | + | Chr4:81036678-81036697 | None:intergenic | 30.0% |
| !!! | AGCTTTTTTCTTAGCTTTTG+CGG | - | Chr4:81037236-81037255 | MsG0480023105.01.T02:CDS | 30.0% |
| !!! | CTCATCAAGTTTTTTTCTGA+GGG | + | Chr4:81036677-81036696 | None:intergenic | 30.0% |
| AAAGCAAAACAACGATGACT+TGG | + | Chr4:81036934-81036953 | None:intergenic | 35.0% | |
| AACTTGGCAAAAGATGAGTT+TGG | + | Chr4:81037111-81037130 | None:intergenic | 35.0% | |
| AAGAAATGGAATCAGCAAAC+TGG | - | Chr4:81036857-81036876 | MsG0480023105.01.T02:CDS | 35.0% | |
| AGAAATGGAATCAGCAAACT+GGG | - | Chr4:81036858-81036877 | MsG0480023105.01.T02:CDS | 35.0% | |
| AGTTTCAACTTCATGTTCAG+GGG | - | Chr4:81037386-81037405 | MsG0480023105.01.T02:CDS | 35.0% | |
| ATTTGCAAAGACATTCCAGA+AGG | - | Chr4:81036180-81036199 | MsG0480023105.01.T02:CDS | 35.0% | |
| CAAAATCAGCAATGAACAAG+AGG | - | Chr4:81036149-81036168 | MsG0480023105.01.T02:CDS | 35.0% | |
| CAGTTTCAACTTCATGTTCA+GGG | - | Chr4:81037385-81037404 | MsG0480023105.01.T02:CDS | 35.0% | |
| CCATCTCAGAATTGAAAAGA+AGG | - | Chr4:81036506-81036525 | MsG0480023105.01.T02:CDS | 35.0% | |
| GCTAAGAAAAAAGCTGAATC+TGG | + | Chr4:81037231-81037250 | None:intergenic | 35.0% | |
| GCTAGCATTATAGTAACTTG+AGG | + | Chr4:81036559-81036578 | None:intergenic | 35.0% | |
| GGTTAGAAACAAAGCAGTTA+TGG | - | Chr4:81036348-81036367 | MsG0480023105.01.T02:CDS | 35.0% | |
| TAGAAACAAAGCAGTTATGG+AGG | - | Chr4:81036351-81036370 | MsG0480023105.01.T02:CDS | 35.0% | |
| TCAGTTTCAACTTCATGTTC+AGG | - | Chr4:81037384-81037403 | MsG0480023105.01.T02:CDS | 35.0% | |
| TGTTTGGAAATTTGAACCAG+AGG | - | Chr4:81037181-81037200 | MsG0480023105.01.T02:CDS | 35.0% | |
| TTCAGGTCAAGAAGAATACT+AGG | - | Chr4:81037325-81037344 | MsG0480023105.01.T02:CDS | 35.0% | |
| TTCTAACCTTGTTCTTCTGT+TGG | + | Chr4:81036336-81036355 | None:intergenic | 35.0% | |
| ! | TCAAGTTGTCCATGCTAAAA+TGG | - | Chr4:81037149-81037168 | MsG0480023105.01.T02:CDS | 35.0% |
| !! | AAAACAACGATGACTTGGTT+TGG | + | Chr4:81036929-81036948 | None:intergenic | 35.0% |
| !! | AAGAACACTCCATTTTAGCA+TGG | + | Chr4:81037161-81037180 | None:intergenic | 35.0% |
| !! | ATTTGATGGTGATCTGTGAA+AGG | + | Chr4:81036295-81036314 | None:intergenic | 35.0% |
| !! | CCTTCTTTTCAATTCTGAGA+TGG | + | Chr4:81036509-81036528 | None:intergenic | 35.0% |
| !! | CTTCTTGATGGTGATTTCAT+AGG | + | Chr4:81036614-81036633 | None:intergenic | 35.0% |
| !!! | CTCTTGTTCATTGCTGATTT+TGG | + | Chr4:81036151-81036170 | None:intergenic | 35.0% |
| !!! | TTTTGAGACTAATCACCTTC+TGG | + | Chr4:81036198-81036217 | None:intergenic | 35.0% |
| ATCACCATCAAGAAGCTTCA+AGG | - | Chr4:81036619-81036638 | MsG0480023105.01.T02:CDS | 40.0% | |
| ATTCTAATTCCGGCGAGTTT+CGG | - | Chr4:81037418-81037437 | MsG0480023105.01.T02:CDS | 40.0% | |
| CAACTCACATCTCAAAGTGA+AGG | - | Chr4:81036258-81036277 | MsG0480023105.01.T02:CDS | 40.0% | |
| GAAGAATACTAGGTTCTCTG+AGG | - | Chr4:81037335-81037354 | MsG0480023105.01.T02:CDS | 40.0% | |
| GAGTCAGGTTTATCTGTCTT+TGG | - | Chr4:81037491-81037510 | MsG0480023105.01.T02:CDS | 40.0% | |
| GTCTTACCAATGTTGAAACC+AGG | + | Chr4:81037462-81037481 | None:intergenic | 40.0% | |
| TAAGACAGTGATACAGAGTC+AGG | - | Chr4:81037476-81037495 | MsG0480023105.01.T02:CDS | 40.0% | |
| TAAGCACCAACAGAAGAACA+AGG | - | Chr4:81036327-81036346 | MsG0480023105.01.T02:CDS | 40.0% | |
| TCAGGTTTATCTGTCTTTGG+TGG | - | Chr4:81037494-81037513 | MsG0480023105.01.T02:CDS | 40.0% | |
| TGGTGAAAACTGCATTTGGA+TGG | + | Chr4:81036909-81036928 | None:intergenic | 40.0% | |
| TTCTCCTTGAAGCTTCTTGA+TGG | + | Chr4:81036626-81036645 | None:intergenic | 40.0% | |
| ! | CTAATAGCAAGGCTTTTTGC+TGG | - | Chr4:81036376-81036395 | MsG0480023105.01.T02:CDS | 40.0% |
| ! | TTATGGAGGCTCTAATAGCA+AGG | - | Chr4:81036365-81036384 | MsG0480023105.01.T02:CDS | 40.0% |
| !! | GGTTTGGTGAAAACTGCATT+TGG | + | Chr4:81036913-81036932 | None:intergenic | 40.0% |
| !! | TAGGTTCTCTGAGGTTTACA+TGG | - | Chr4:81037344-81037363 | MsG0480023105.01.T02:CDS | 40.0% |
| !! | TTTCTTAGCTTTTGCGGAGA+TGG | - | Chr4:81037242-81037261 | MsG0480023105.01.T02:CDS | 40.0% |
| AGGAAGCTAGTGAATTCTGG+AGG | - | Chr4:81037201-81037220 | MsG0480023105.01.T02:CDS | 45.0% | |
| CAGAGGAAGCTAGTGAATTC+TGG | - | Chr4:81037198-81037217 | MsG0480023105.01.T02:CDS | 45.0% | |
| CGTTTGGACACTGCATTACT+TGG | - | Chr4:81037272-81037291 | MsG0480023105.01.T02:CDS | 45.0% | |
| GGAAGCTAGTGAATTCTGGA+GGG | - | Chr4:81037202-81037221 | MsG0480023105.01.T02:CDS | 45.0% | |
| TTCTAATTCCGGCGAGTTTC+GGG | - | Chr4:81037419-81037438 | MsG0480023105.01.T02:CDS | 45.0% | |
| ! | CAGAATTCACTAGCTTCCTC+TGG | + | Chr4:81037200-81037219 | None:intergenic | 45.0% |
| ACAAGCAGCTGATCAAGCAG+TGG | - | Chr4:81036468-81036487 | MsG0480023105.01.T02:CDS | 50.0% | |
| GTGGTGCCTGGTTTCAACAT+TGG | - | Chr4:81037453-81037472 | MsG0480023105.01.T02:CDS | 50.0% | |
| !! | CGAGTTTCGGGTGGTTTTCA+CGG | - | Chr4:81037431-81037450 | MsG0480023105.01.T02:CDS | 50.0% |
| AGCAGCTGATCAAGCAGTGG+TGG | - | Chr4:81036471-81036490 | MsG0480023105.01.T02:CDS | 55.0% | |
| GAAAACCACCCGAAACTCGC+CGG | + | Chr4:81037430-81037449 | None:intergenic | 55.0% | |
| TAATTCCGGCGAGTTTCGGG+TGG | - | Chr4:81037422-81037441 | MsG0480023105.01.T02:CDS | 55.0% | |
| !! | GTTTCGGGTGGTTTTCACGG+TGG | - | Chr4:81037434-81037453 | MsG0480023105.01.T02:CDS | 55.0% |
| CGGAGATGGCAAAGCGCGTT+TGG | - | Chr4:81037256-81037275 | MsG0480023105.01.T02:CDS | 60.0% | |
| ! | GTGGTTTTCACGGTGGTGCC+TGG | - | Chr4:81037441-81037460 | MsG0480023105.01.T02:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 81036133 | 81037536 | 81036133 | ID=MsG0480023105.01;Name=MsG0480023105.01 |
| Chr4 | mRNA | 81036133 | 81037536 | 81036133 | ID=MsG0480023105.01.T01;Parent=MsG0480023105.01;Name=MsG0480023105.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|0|0|2|0|448 |
| Chr4 | exon | 81036133 | 81037367 | 81036133 | ID=MsG0480023105.01.T01:exon:2349;Parent=MsG0480023105.01.T01 |
| Chr4 | exon | 81037425 | 81037536 | 81037425 | ID=MsG0480023105.01.T01:exon:2348;Parent=MsG0480023105.01.T01 |
| Chr4 | CDS | 81037425 | 81037536 | 81037425 | ID=MsG0480023105.01.T01:cds;Parent=MsG0480023105.01.T01 |
| Chr4 | CDS | 81036133 | 81037367 | 81036133 | ID=MsG0480023105.01.T01:cds;Parent=MsG0480023105.01.T01 |
| Chr4 | mRNA | 81036133 | 81037536 | 81036133 | ID=MsG0480023105.01.T02;Parent=MsG0480023105.01;Name=MsG0480023105.01.T02;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|467 |
| Chr4 | exon | 81036133 | 81037536 | 81036133 | ID=MsG0480023105.01.T02:exon:2350;Parent=MsG0480023105.01.T02 |
| Chr4 | CDS | 81036133 | 81037536 | 81036133 | ID=MsG0480023105.01.T02:cds;Parent=MsG0480023105.01.T02 |
| Chr4 | mRNA | 81036133 | 81037302 | 81036133 | ID=MsG0480023105.01.T03;Parent=MsG0480023105.01;Name=MsG0480023105.01.T03;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|0|1|0|389 |
| Chr4 | exon | 81036133 | 81037302 | 81036133 | ID=MsG0480023105.01.T03:exon:2351;Parent=MsG0480023105.01.T03 |
| Chr4 | CDS | 81036133 | 81037302 | 81036133 | ID=MsG0480023105.01.T03:cds;Parent=MsG0480023105.01.T03 |
| Gene Sequence |
| Protein sequence |
