AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043345.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043345.01.T01 MTR_1g044020 27.282 953 501 26 96 879 782 1711 3.60e-67 249
MsG0880043345.01.T01 MTR_1g044020 26.604 951 516 29 90 884 1814 2738 5.72e-61 229
MsG0880043345.01.T01 MTR_1g044020 26.218 965 505 28 90 881 1289 2219 3.02e-58 221
MsG0880043345.01.T01 MTR_1g044020 25.458 491 249 15 89 472 2315 2795 8.06e-24 109
MsG0880043345.01.T01 MTR_1g044020 23.127 774 435 29 223 877 712 1444 4.45e-15 81.3
MsG0880043345.01.T01 MTR_8g059275 27.027 962 505 27 91 879 949 1886 5.16e-67 248
MsG0880043345.01.T01 MTR_8g059275 27.069 894 469 29 91 879 557 1372 3.84e-57 217
MsG0880043345.01.T01 MTR_8g059275 25.153 815 508 22 309 1040 360 1155 1.47e-38 157
MsG0880043345.01.T01 MTR_8g059275 30.716 433 236 11 506 879 33 460 8.40e-38 155
MsG0880043345.01.T01 MTR_8g059275 25.157 477 253 12 89 465 1467 1939 9.83e-27 119
MsG0880043345.01.T01 MTR_8g059275 25.114 438 229 14 91 481 37 422 2.01e-18 92.0
MsG0880043345.01.T01 MTR_8g059275 27.027 962 505 28 91 879 1469 2406 1.70e-65 243
MsG0880043345.01.T01 MTR_8g059275 27.324 893 468 29 91 879 557 1372 7.02e-54 207
MsG0880043345.01.T01 MTR_8g059275 28.454 608 366 14 332 879 1294 1892 1.11e-45 181
MsG0880043345.01.T01 MTR_8g059275 27.674 589 356 15 309 837 360 938 1.07e-38 158
MsG0880043345.01.T01 MTR_8g059275 30.716 433 236 11 506 879 33 460 6.44e-38 155
MsG0880043345.01.T01 MTR_8g059275 25.157 477 253 12 89 465 1987 2459 6.45e-27 120
MsG0880043345.01.T01 MTR_8g059275 25.114 438 229 14 91 481 37 422 1.65e-18 92.4
MsG0880043345.01.T01 MTR_8g059275 28.514 249 141 5 49 262 907 1153 3.45e-18 91.3
MsG0880043345.01.T01 MTR_8g059275 27.027 962 505 28 91 879 1077 2014 2.31e-65 243
MsG0880043345.01.T01 MTR_8g059275 28.454 608 366 14 332 879 902 1500 1.27e-45 180
MsG0880043345.01.T01 MTR_8g059275 28.889 630 380 15 309 879 360 980 5.99e-43 172
MsG0880043345.01.T01 MTR_8g059275 30.716 433 236 11 506 879 33 460 7.37e-38 155
MsG0880043345.01.T01 MTR_8g059275 25.157 477 253 12 89 465 1595 2067 7.46e-27 119
MsG0880043345.01.T01 MTR_8g059275 25.114 438 229 14 91 481 37 422 2.15e-18 92.0
MsG0880043345.01.T01 MTR_8g059275 29.752 242 119 7 91 297 557 782 2.22e-16 85.5
MsG0880043345.01.T01 MTR_1g051625 26.632 965 509 28 90 877 21 963 4.61e-65 239
MsG0880043345.01.T01 MTR_1g051625 29.977 437 234 10 506 879 18 445 3.78e-39 158
MsG0880043345.01.T01 MTR_1g051625 26.025 488 248 14 89 469 540 1021 2.31e-28 124
MsG0880043345.01.T01 MTR_1g442750 26.251 979 522 30 8 881 1409 2292 1.02e-63 238
MsG0880043345.01.T01 MTR_1g442750 26.438 730 377 21 111 699 1007 1717 2.15e-44 176
MsG0880043345.01.T01 MTR_1g442750 26.409 621 351 15 342 874 769 1371 1.20e-37 154
MsG0880043345.01.T01 MTR_1g442750 21.024 918 501 32 108 877 787 1628 8.36e-12 70.5
MsG0880043345.01.T01 MTR_0069s0080 27.372 917 461 28 89 839 548 1425 8.61e-63 234
MsG0880043345.01.T01 MTR_0069s0080 26.833 641 390 12 302 879 346 970 8.17e-43 171
MsG0880043345.01.T01 MTR_0069s0080 27.160 648 346 18 34 575 963 1590 3.90e-34 143
MsG0880043345.01.T01 MTR_0069s0080 27.397 438 246 9 506 879 24 453 7.51e-30 129
MsG0880043345.01.T01 MTR_0069s0080 24.831 443 240 12 84 481 21 415 2.91e-18 91.7
MsG0880043345.01.T01 MTR_0006s0080 27.119 944 486 28 119 885 873 1791 2.67e-62 233
MsG0880043345.01.T01 MTR_0006s0080 26.871 521 330 13 361 874 784 1260 1.75e-35 147
MsG0880043345.01.T01 MTR_0006s0080 25.806 496 257 12 89 477 1361 1852 4.01e-32 136
MsG0880043345.01.T01 MTR_0006s0080 23.114 835 469 35 111 876 785 1515 1.27e-14 79.7
MsG0880043345.01.T01 MTR_2g089975 25.957 940 505 22 111 878 1042 1962 3.29e-61 230
MsG0880043345.01.T01 MTR_2g089975 28.663 621 359 17 313 866 2387 2990 1.77e-46 183
MsG0880043345.01.T01 MTR_2g089975 24.330 933 538 24 77 898 1613 2488 2.56e-44 176
MsG0880043345.01.T01 MTR_2g089975 26.923 624 343 15 358 874 820 1437 1.08e-37 155
MsG0880043345.01.T01 MTR_2g089975 22.492 987 517 39 1 877 846 1694 1.09e-21 102
MsG0880043345.01.T01 MTR_2g089975 29.630 216 107 7 86 258 2566 2779 1.70e-16 85.9
MsG0880043345.01.T01 MTR_2g089975 25.682 440 228 19 89 481 1538 1925 3.54e-16 84.7
MsG0880043345.01.T01 MTR_8g059275 26.632 965 509 30 91 879 1077 2018 9.38e-61 228
MsG0880043345.01.T01 MTR_8g059275 28.758 612 363 15 332 879 902 1504 5.32e-44 175
MsG0880043345.01.T01 MTR_8g059275 28.889 630 380 15 309 879 360 980 6.53e-43 171
MsG0880043345.01.T01 MTR_8g059275 30.716 433 236 11 506 879 33 460 7.76e-38 155
MsG0880043345.01.T01 MTR_8g059275 25.157 477 253 12 89 465 1599 2071 7.79e-27 119
MsG0880043345.01.T01 MTR_8g059275 25.114 438 229 14 91 481 37 422 2.18e-18 92.0
MsG0880043345.01.T01 MTR_8g059275 29.752 242 119 7 91 297 557 782 2.25e-16 85.5
MsG0880043345.01.T01 MTR_1g036750 26.050 929 504 23 119 879 1020 1933 6.29e-59 223
MsG0880043345.01.T01 MTR_1g036750 28.351 649 380 16 302 884 1828 2457 9.42e-45 177
MsG0880043345.01.T01 MTR_1g036750 25.620 484 249 13 89 465 2028 2507 7.77e-28 122
MsG0880043345.01.T01 MTR_1g036750 25.289 692 352 21 321 873 741 1406 1.20e-22 105
MsG0880043345.01.T01 MTR_1g036750 24.138 522 277 20 8 481 1445 1895 4.87e-20 97.4
MsG0880043345.01.T01 MTR_1g036750 21.894 982 532 35 1 879 817 1666 3.42e-14 78.2
MsG0880043345.01.T01 MTR_1g037250 25.628 995 572 28 1 872 852 1801 1.18e-57 218
MsG0880043345.01.T01 MTR_1g037250 25.785 446 272 16 335 741 805 1230 2.04e-18 92.0
MsG0880043345.01.T01 MTR_1g037250 29.146 199 131 4 274 465 1665 1860 1.10e-11 70.1
MsG0880043345.01.T01 MTR_1g041550 27.045 917 496 28 119 879 1051 1950 1.16e-55 213
MsG0880043345.01.T01 MTR_1g041550 25.957 967 518 26 90 879 1526 2471 1.69e-55 212
MsG0880043345.01.T01 MTR_1g041550 27.151 523 310 15 361 873 962 1423 8.15e-33 139
MsG0880043345.01.T01 MTR_1g041550 28.780 205 109 6 89 258 2045 2247 5.24e-15 80.9
MsG0880043345.01.T01 MTR_1g041550 32.450 151 100 1 313 463 2374 2522 8.15e-12 70.5
MsG0880043345.01.T01 MTR_8g028500 32.107 598 317 18 347 879 1348 1921 1.81e-54 209
MsG0880043345.01.T01 MTR_8g028500 28.632 709 382 20 69 669 1494 2186 1.10e-53 206
MsG0880043345.01.T01 MTR_8g028500 26.128 532 321 19 358 879 941 1410 4.20e-25 114
MsG0880043345.01.T01 MTR_8g028500 27.778 234 109 6 96 270 2032 2264 4.70e-13 74.7
MsG0880043345.01.T01 MTR_1g051585 26.848 920 479 27 119 874 1050 1939 3.57e-54 207
MsG0880043345.01.T01 MTR_1g051585 25.149 672 378 17 321 873 770 1435 2.07e-30 131
MsG0880043345.01.T01 MTR_1g051585 25.625 480 246 12 90 466 1524 1995 9.67e-26 115
MsG0880043345.01.T01 MTR_1g051585 21.635 795 429 31 207 877 955 1679 1.31e-11 69.7
MsG0880043345.01.T01 MTR_0006s0240 26.188 905 517 26 90 879 1506 2374 1.37e-52 202
MsG0880043345.01.T01 MTR_0006s0240 25.591 762 393 23 117 715 1015 1765 1.18e-40 164
MsG0880043345.01.T01 MTR_0006s0240 28.030 528 313 16 361 873 928 1403 3.25e-35 147
MsG0880043345.01.T01 MTR_0006s0240 21.421 929 510 34 111 877 791 1661 1.06e-12 73.6
MsG0880043345.01.T01 MTR_0006s0240 28.421 190 128 3 281 465 2241 2427 1.27e-11 69.7
MsG0880043345.01.T01 MTR_1g050402 30.278 611 364 15 309 873 1362 1956 4.87e-51 197
MsG0880043345.01.T01 MTR_1g050402 26.370 675 372 20 216 878 900 1461 5.27e-26 117
MsG0880043345.01.T01 MTR_1g050402 23.598 517 283 14 90 511 1559 2058 3.99e-24 110
MsG0880043345.01.T01 MTR_0006s0160 26.217 801 416 23 119 760 123 907 7.65e-51 194
MsG0880043345.01.T01 MTR_0006s0160 27.619 525 311 15 361 874 34 500 7.61e-36 147
MsG0880043345.01.T01 MTR_0006s0160 28.731 268 134 7 90 317 602 852 3.53e-17 87.4
MsG0880043345.01.T01 MTR_0006s0160 22.833 600 345 22 360 879 198 759 4.96e-14 77.4
MsG0880043345.01.T01 MTR_8g028520 30.399 602 320 17 347 879 1344 1915 1.70e-49 192
MsG0880043345.01.T01 MTR_8g028520 29.583 480 232 14 93 476 1515 1984 6.94e-38 155
MsG0880043345.01.T01 MTR_8g028520 26.007 596 324 22 361 879 851 1406 3.65e-25 114
MsG0880043345.01.T01 MTR_0460s0010 26.152 738 377 19 90 669 11 738 6.02e-49 187
MsG0880043345.01.T01 MTR_0460s0010 30.118 425 235 11 506 874 8 426 3.46e-35 144
MsG0880043345.01.T01 MTR_0460s0010 26.573 286 155 10 10 260 466 731 1.64e-17 88.6
MsG0880043345.01.T01 MTR_1g050395 30.272 588 327 16 365 885 93 664 1.26e-47 183
MsG0880043345.01.T01 MTR_1g050395 30.244 205 106 6 89 258 235 437 9.76e-17 85.9
MsG0880043345.01.T01 MTR_1g050395 30.409 171 117 1 307 477 557 725 7.32e-14 76.6
MsG0880043345.01.T01 MTR_1g037010 25.318 944 498 30 119 884 975 1889 5.45e-46 181
MsG0880043345.01.T01 MTR_1g037010 28.023 521 322 14 361 873 886 1361 1.46e-36 151
MsG0880043345.01.T01 MTR_1g037010 24.433 573 299 15 8 472 1400 1946 3.96e-30 130
MsG0880043345.01.T01 MTR_6g463150 26.210 744 372 21 119 699 1046 1775 1.74e-43 173
MsG0880043345.01.T01 MTR_6g463150 28.107 523 312 16 361 873 960 1428 8.78e-36 148
MsG0880043345.01.T01 MTR_6g463150 25.235 531 299 23 114 594 1387 1869 1.46e-11 69.7
MsG0880043345.01.T01 MTR_1g037150 25.591 762 393 23 117 715 1036 1786 3.88e-41 166
MsG0880043345.01.T01 MTR_1g037150 28.030 528 313 16 361 873 949 1424 1.55e-35 147
MsG0880043345.01.T01 MTR_1g037150 26.800 500 298 14 90 544 1527 2003 1.21e-29 128
MsG0880043345.01.T01 MTR_1g037150 21.421 929 510 34 111 877 812 1682 3.79e-13 74.7
MsG0880043345.01.T01 MTR_0006s0230 25.734 886 477 28 119 878 1020 1850 1.49e-39 160
MsG0880043345.01.T01 MTR_0006s0230 26.322 813 475 27 114 873 1365 2106 5.31e-38 155
MsG0880043345.01.T01 MTR_0006s0230 25.000 688 361 20 321 874 741 1407 9.66e-24 109
MsG0880043345.01.T01 MTR_0006s0230 25.607 453 233 11 111 465 1716 2162 7.73e-21 100
MsG0880043345.01.T01 MTR_0006s0230 22.178 1010 509 38 1 876 817 1683 2.57e-20 98.2
MsG0880043345.01.T01 MTR_0006s0230 24.878 410 257 13 90 462 1509 1904 7.10e-20 97.1
MsG0880043345.01.T01 MTR_2g071860 27.062 691 368 19 313 878 308 987 3.12e-39 159
MsG0880043345.01.T01 MTR_2g071860 24.308 506 275 12 68 478 560 1052 3.16e-23 107
MsG0880043345.01.T01 MTR_2g071860 23.833 621 333 25 136 682 498 1052 3.42e-14 78.2
MsG0880043345.01.T01 MTR_1g037130 25.930 887 474 29 119 878 1049 1879 4.68e-39 159
MsG0880043345.01.T01 MTR_1g037130 26.322 813 475 27 114 873 1394 2135 2.14e-38 157
MsG0880043345.01.T01 MTR_1g037130 24.490 686 367 15 321 874 770 1436 1.08e-27 122
MsG0880043345.01.T01 MTR_1g037130 25.607 453 233 11 111 465 1745 2191 6.11e-21 100
MsG0880043345.01.T01 MTR_1g037130 21.822 944 505 35 111 876 824 1712 6.06e-18 90.5
MsG0880043345.01.T01 MTR_6g464050 28.269 520 325 13 361 874 1577 2054 1.31e-38 157
MsG0880043345.01.T01 MTR_6g464050 23.343 694 371 27 111 668 1441 2109 2.52e-13 75.5
MsG0880043345.01.T01 MTR_0068s0080 28.977 528 310 15 361 874 958 1434 1.37e-38 157
MsG0880043345.01.T01 MTR_0068s0080 26.721 610 332 15 111 613 1039 1640 1.01e-35 148
MsG0880043345.01.T01 MTR_0068s0080 33.333 126 77 3 90 210 1536 1659 5.43e-12 70.9
MsG0880043345.01.T01 MTR_2g072080 28.516 519 297 14 364 878 932 1380 3.30e-38 156
MsG0880043345.01.T01 MTR_2g072080 24.138 464 243 11 110 478 996 1445 1.94e-19 95.1
MsG0880043345.01.T01 MTR_1g036820 26.843 529 321 11 91 575 37 543 6.08e-38 154
MsG0880043345.01.T01 MTR_1g036820 26.882 279 142 7 494 716 21 293 3.82e-14 77.8
MsG0880043345.01.T01 MTR_1g036820 32.212 208 126 6 684 884 563 762 8.82e-14 76.6
MsG0880043345.01.T01 MTR_1g036820 29.534 193 122 4 281 465 626 812 4.06e-12 71.2
MsG0880043345.01.T01 MTR_1g036800 27.308 520 329 12 361 874 959 1435 1.52e-36 150
MsG0880043345.01.T01 MTR_1g036800 24.444 450 232 12 119 466 1048 1491 6.55e-19 93.6
MsG0880043345.01.T01 MTR_1g036800 25.587 383 195 15 360 668 1123 1489 6.26e-12 70.9
MsG0880043345.01.T01 MTR_0068s0080 28.492 537 310 16 361 874 958 1443 1.54e-36 150
MsG0880043345.01.T01 MTR_0068s0080 25.272 459 235 12 111 467 1048 1500 2.09e-21 101
MsG0880043345.01.T01 MTR_0069s0040 27.533 523 323 13 361 873 961 1437 9.80e-35 145
MsG0880043345.01.T01 MTR_0069s0040 24.667 450 230 11 119 465 1050 1493 4.01e-18 90.9
MsG0880043345.01.T01 MTR_0012s0150 28.327 526 314 17 361 873 710 1185 2.48e-34 143
MsG0880043345.01.T01 MTR_0012s0150 26.288 563 300 15 119 575 799 1352 6.72e-28 122
MsG0880043345.01.T01 MTR_0012s0150 22.658 790 443 32 207 879 704 1442 8.40e-14 77.0
MsG0880043345.01.T01 MTR_8g059345 27.151 523 320 15 361 873 959 1430 2.68e-33 140
MsG0880043345.01.T01 MTR_6g464030 26.698 648 373 21 309 879 192 814 7.96e-33 138
MsG0880043345.01.T01 MTR_6g464030 29.153 295 197 6 591 879 4 292 2.26e-21 101
MsG0880043345.01.T01 MTR_6g464030 29.756 205 107 6 89 258 387 589 3.98e-16 84.3
MsG0880043345.01.T01 MTR_1g044095 24.076 893 521 29 1 836 1 793 2.61e-32 136
MsG0880043345.01.T01 MTR_1g044095 25.101 494 301 10 385 874 2 430 2.58e-25 114
MsG0880043345.01.T01 MTR_1g044095 25.758 396 239 11 312 672 708 1083 5.03e-12 70.9
MsG0880043345.01.T01 MTR_0006s0300 27.256 532 315 15 364 873 3 484 5.29e-32 133
MsG0880043345.01.T01 MTR_0006s0300 25.219 456 222 13 120 463 90 538 4.46e-17 86.7
MsG0880043345.01.T01 MTR_2g071890 28.257 499 280 13 432 876 955 1429 2.07e-31 134
MsG0880043345.01.T01 MTR_2g071890 23.482 741 401 32 5 667 831 1483 1.22e-13 76.3
MsG0880043345.01.T01 MTR_2g071890 25.641 195 138 3 310 500 1333 1524 9.08e-11 67.0
MsG0880043345.01.T01 MTR_2g071850 26.465 563 342 16 338 876 912 1426 6.11e-30 129
MsG0880043345.01.T01 MTR_2g072030 25.071 702 375 22 313 876 773 1461 7.19e-30 129
MsG0880043345.01.T01 MTR_2g071870 26.465 563 342 16 338 876 912 1426 8.15e-30 129
MsG0880043345.01.T01 MTR_2g071870 29.375 160 110 2 310 469 1330 1486 5.69e-12 70.9
MsG0880043345.01.T01 MTR_2g071960 26.465 563 342 16 338 876 782 1296 8.69e-30 129
MsG0880043345.01.T01 MTR_2g071980 26.545 550 339 14 338 876 911 1406 4.89e-29 126
MsG0880043345.01.T01 MTR_2g072820 28.604 444 249 13 497 883 999 1431 7.79e-29 125
MsG0880043345.01.T01 MTR_2g072820 22.160 537 302 15 65 499 996 1518 2.10e-15 82.0
MsG0880043345.01.T01 MTR_2g072820 23.568 454 270 17 283 667 1033 1478 7.76e-12 70.5
MsG0880043345.01.T01 MTR_2g072110 26.930 531 325 15 364 876 968 1453 1.22e-28 125
MsG0880043345.01.T01 MTR_2g072110 28.205 195 133 3 307 497 1354 1545 1.47e-12 72.8
MsG0880043345.01.T01 MTR_0002s0030 71.622 74 20 1 513 585 43 116 2.93e-27 108
MsG0880043345.01.T01 MTR_8g059385 27.198 364 193 10 506 805 17 372 9.32e-26 111
MsG0880043345.01.T01 MTR_8g059385 25.897 390 194 12 91 435 21 360 2.81e-19 91.7
MsG0880043345.01.T01 MTR_1g036880 26.651 424 243 11 90 465 48 451 1.81e-24 108
MsG0880043345.01.T01 MTR_0006s0250 27.078 421 241 13 90 465 24 423 4.93e-24 107
MsG0880043345.01.T01 MTR_0006s0250 27.341 267 133 9 506 715 21 283 4.61e-14 76.6
MsG0880043345.01.T01 MTR_2g072110 25.160 469 282 12 93 497 1043 1506 1.01e-22 105
MsG0880043345.01.T01 MTR_2g072110 25.094 530 297 16 364 876 968 1414 5.92e-20 97.1
MsG0880043345.01.T01 MTR_2g072110 25.000 432 261 18 280 667 1056 1468 1.94e-15 82.4
MsG0880043345.01.T01 MTR_2g072090 25.763 524 317 16 338 837 912 1387 1.28e-22 105
MsG0880043345.01.T01 MTR_4g025430 25.664 678 398 25 221 878 768 1359 3.37e-22 104
MsG0880043345.01.T01 MTR_8g059395 27.095 358 219 8 558 876 1 355 3.77e-22 100
MsG0880043345.01.T01 MTR_0006s0290 27.139 409 238 15 84 476 18 382 5.99e-21 97.1
MsG0880043345.01.T01 MTR_0069s0090 31.274 259 157 6 634 879 6 256 6.25e-21 96.3
MsG0880043345.01.T01 MTR_0069s0090 32.026 153 102 1 313 465 159 309 1.99e-11 67.4
MsG0880043345.01.T01 MTR_7g088650 22.082 634 379 22 307 881 556 1133 7.03e-21 99.8
MsG0880043345.01.T01 MTR_1g036520 25.093 538 298 14 321 764 349 875 7.49e-21 99.8
MsG0880043345.01.T01 MTR_4g025470 25.120 625 326 22 357 876 803 1390 2.33e-17 88.6
MsG0880043345.01.T01 MTR_5g036460 24.242 660 348 22 125 640 902 1553 1.17e-16 86.3
MsG0880043345.01.T01 MTR_0602s0010 27.245 323 194 11 559 876 11 297 6.48e-16 81.3
MsG0880043345.01.T01 MTR_0402s0020 32.812 192 125 3 684 873 24 213 6.89e-16 80.5
MsG0880043345.01.T01 MTR_0402s0020 29.714 175 116 3 300 474 114 281 1.06e-12 70.9
MsG0880043345.01.T01 MTR_2g072020 24.578 533 329 18 358 876 1016 1489 9.57e-16 83.2
MsG0880043345.01.T01 MTR_2g072150 23.064 607 271 23 215 741 823 1313 1.24e-15 82.8
MsG0880043345.01.T01 MTR_2g072150 26.087 207 114 5 90 260 1033 1236 4.53e-13 74.3
MsG0880043345.01.T01 MTR_1g006975 23.248 628 370 25 298 867 896 1469 3.80e-15 81.3
MsG0880043345.01.T01 MTR_0069s0050 33.514 185 119 3 690 873 116 297 1.29e-14 77.8
MsG0880043345.01.T01 MTR_0783s0010 28.519 270 158 7 604 873 3 237 3.88e-14 75.5
MsG0880043345.01.T01 MTR_0783s0010 29.496 278 154 8 221 463 21 291 3.77e-12 69.3
MsG0880043345.01.T01 MTR_7g088640 23.155 691 392 26 46 660 835 1462 2.49e-13 75.5
MsG0880043345.01.T01 MTR_1g036870 28.405 257 168 6 623 873 185 431 2.55e-13 74.3
MsG0880043345.01.T01 MTR_1g050230 32.500 120 74 3 89 203 260 377 5.12e-13 72.8
MsG0880043345.01.T01 MTR_1g050230 32.886 149 98 1 427 575 179 325 1.86e-12 71.2
MsG0880043345.01.T01 MTR_8g059325 27.083 192 103 5 91 247 12 201 1.85e-12 67.8
MsG0880043345.01.T01 MTR_7g088290 22.548 785 452 32 111 801 976 1698 7.08e-12 70.5
MsG0880043345.01.T01 MTR_7g088290 21.406 640 352 24 361 880 975 1583 3.24e-11 68.6
MsG0880043345.01.T01 MTR_3g013790 22.874 494 260 18 1 469 843 1240 1.70e-11 69.3
MsG0880043345.01.T01 MTR_8g059295 29.775 178 117 4 303 478 67 238 3.01e-11 65.9
MsG0880043345.01.T01 MTR_8g059295 31.609 174 114 4 702 874 1 170 3.76e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 212 sgRNAs with CRISPR-Local

Find 439 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTTGTATTTCACTAATTT+TGG 0.064025 8:+23415853 None:intergenic
GTGAATAAATAATTCAATTT+TGG 0.117572 8:+23415638 None:intergenic
ATTCATGAAACTTGAGATTT+TGG 0.131518 8:-23411965 MsG0880043345.01.T01:CDS
TATTTCCATTTCTCGTAAAT+TGG 0.159119 8:+23415916 None:intergenic
CAGTTTGACGTCTCTGATTC+TGG 0.172770 8:-23416517 MsG0880043345.01.T01:CDS
TTTAGATTGGAGAAAGATAT+TGG 0.237730 8:+23415683 None:intergenic
ATCTTCGAACCTTGCTTGTT+TGG 0.241564 8:-23412533 MsG0880043345.01.T01:CDS
AAGATACAGTGTGGTTAAAC+TGG 0.267711 8:+23416093 None:intergenic
CCTATCACTGCTTGAAGAAT+TGG 0.273964 8:-23412625 MsG0880043345.01.T01:CDS
TCCTTATATCAAGCTTTATC+AGG 0.282300 8:+23412460 None:intergenic
ATGTCTACATGAATTGTCTA+TGG 0.282903 8:-23410651 MsG0880043345.01.T01:three_prime_UTR
GGCACCCAATTTACGAGAAA+TGG 0.284659 8:-23415921 MsG0880043345.01.T01:CDS
TATATATAATCATGAAAATA+AGG 0.288780 8:+23410281 None:intergenic
TCTAAAATCTTTATCAAGTC+TGG 0.289756 8:-23415480 MsG0880043345.01.T01:CDS
TGCCTTAAGATCCGAGAAAA+AGG 0.292354 8:+23415940 None:intergenic
CTCCTTTGTTGAAAGAGATA+TGG 0.293922 8:-23414955 MsG0880043345.01.T01:CDS
CCAATGATTTCAAGTTGATT+AGG 0.295120 8:+23414822 None:intergenic
CACATGTGTGTATGACATTT+CGG 0.296085 8:-23410359 MsG0880043345.01.T01:three_prime_UTR
TAAAATGAGTGTTATGTTCA+TGG 0.308924 8:-23410333 MsG0880043345.01.T01:three_prime_UTR
TAAATTCCATAACTTCAAAA+AGG 0.311522 8:+23414610 None:intergenic
CCTAATCAACTTGAAATCAT+TGG 0.311953 8:-23414822 MsG0880043345.01.T01:CDS
TCCGTTTGTCTTCCATTCTA+AGG 0.313876 8:-23412742 MsG0880043345.01.T01:CDS
TCTTCGAACCTTGCTTGTTT+GGG 0.322368 8:-23412532 MsG0880043345.01.T01:CDS
CAGGAATTTCAACAAATTGT+TGG 0.331978 8:-23416159 MsG0880043345.01.T01:CDS
TTAGATTGGAGAAAGATATT+GGG 0.347207 8:+23415684 None:intergenic
AAACGAGGGAATTCAATTCT+TGG 0.349505 8:+23412796 None:intergenic
ACCTGATAAAGCTTGATATA+AGG 0.353129 8:-23412461 MsG0880043345.01.T01:CDS
CATTGTAAAACGTGCTTCTC+TGG 0.354066 8:+23414566 None:intergenic
CACATGTAAATCATTTAACT+TGG 0.354441 8:+23416015 None:intergenic
CCAATTCTTCAAGCAGTGAT+AGG 0.357836 8:+23412625 None:intergenic
ATTTCCATTTCTCGTAAATT+GGG 0.364120 8:+23415917 None:intergenic
AATTTACGAGAAATGGAAAT+AGG 0.364884 8:-23415914 MsG0880043345.01.T01:CDS
TTAAATGATTTACATGTGTT+TGG 0.365956 8:-23416010 MsG0880043345.01.T01:CDS
ATTGTCACCTTCAAATCCTT+TGG 0.366730 8:+23411814 None:intergenic
AAACAACGAAGAATATTAGA+TGG 0.375801 8:+23416465 None:intergenic
ACAGATGCTGTCAACAAGTA+TGG 0.376051 8:-23416619 MsG0880043345.01.T01:intron
AAGTCTTAACCTTCCAAGTC+TGG 0.378349 8:-23414738 MsG0880043345.01.T01:CDS
TTTGAAGAAAGTGGAAATAT+CGG 0.386480 8:-23415417 MsG0880043345.01.T01:CDS
AACTTTGGTGTTGTCGCATT+GGG 0.390911 8:+23411858 None:intergenic
GACAATTCATGTAGACATAA+AGG 0.392769 8:+23410656 None:intergenic
TGCGATCATGCAACAGTTTG+AGG 0.393528 8:-23411758 MsG0880043345.01.T01:CDS
CAACAATGTTAAAGCACCTT+GGG 0.403375 8:-23417549 MsG0880043345.01.T01:CDS
TCGGTTCATGCGAAATATTT+CGG 0.403767 8:-23415362 MsG0880043345.01.T01:CDS
TCACAGTTCACACGAGTGTC+AGG 0.404247 8:-23414480 MsG0880043345.01.T01:CDS
TGCAGCAATGTCGTCAAATC+AGG 0.406164 8:+23415716 None:intergenic
TCTTCAATTCGATCACTTGT+GGG 0.408282 8:+23415519 None:intergenic
CCCGTTGTAGAAGAATTTCC+TGG 0.410198 8:+23415267 None:intergenic
CAAACTTCCTGTGGAAATAC+AGG 0.418146 8:+23410518 None:intergenic
TTACATAAAGCATGGTTGTC+TGG 0.418534 8:+23410438 None:intergenic
AGTTGTGAATTGTAGTTCAA+TGG 0.423152 8:-23415573 MsG0880043345.01.T01:CDS
GAGATTTCAAAATCTGCTAA+TGG 0.423675 8:-23416277 MsG0880043345.01.T01:CDS
GAAGATAAGGGTATAACATC+AGG 0.423919 8:-23410747 MsG0880043345.01.T01:three_prime_UTR
AAGAATTTCCTGGTCTACTT+TGG 0.424132 8:+23415277 None:intergenic
CACTAAATCATCATTTGAAC+AGG 0.429082 8:+23415322 None:intergenic
TTTGAAATCTCAGGATTCCT+TGG 0.431655 8:+23416289 None:intergenic
GCAACACTATTGACAAATCA+AGG 0.432014 8:-23410724 MsG0880043345.01.T01:three_prime_UTR
CTGTCCCGGCTTGAATCCAT+TGG 0.437364 8:-23412591 MsG0880043345.01.T01:CDS
ATATTTGTTTATACAAAGAC+TGG 0.441941 8:-23414770 MsG0880043345.01.T01:CDS
TTCTTCAATTCGATCACTTG+TGG 0.446447 8:+23415518 None:intergenic
AGCATTTGTCTCACTTGAAA+AGG 0.449586 8:-23414435 MsG0880043345.01.T01:intron
CCAGGAAATTCTTCTACAAC+GGG 0.450414 8:-23415267 MsG0880043345.01.T01:intron
CTACATTCACCCTCATCCTC+AGG 0.452408 8:+23415983 None:intergenic
TCGGGTCAGAGGATTCTTCA+TGG 0.452467 8:-23415787 MsG0880043345.01.T01:CDS
GAGTAAAAGTATTTGAGCTC+TGG 0.452471 8:+23416061 None:intergenic
CTGTGTATGTACTCTACTAC+TGG 0.453856 8:-23410409 MsG0880043345.01.T01:three_prime_UTR
TTTAGCTTGTTACCAAAACT+TGG 0.464545 8:-23411940 MsG0880043345.01.T01:CDS
CCTGCATAAACATATATACT+AGG 0.464575 8:+23410590 None:intergenic
GAAGGCAGTAGTGGCTAAAG+AGG 0.466322 8:-23412346 MsG0880043345.01.T01:CDS
TTGGTATTTGATCACCATGA+TGG 0.466754 8:+23411833 None:intergenic
CAGATTAAGTCCATCATACC+AGG 0.466885 8:+23416557 None:intergenic
GGAAGGTTAAGACTTCCTTC+AGG 0.467682 8:+23414746 None:intergenic
AGCCAACTGTAAATTATTGA+AGG 0.474507 8:-23412364 MsG0880043345.01.T01:CDS
TGGAATGCAGTATGAAGATA+AGG 0.475625 8:-23410760 MsG0880043345.01.T01:three_prime_UTR
AGTGAAAGTGCTTCCAAGCC+GGG 0.477833 8:+23412870 None:intergenic
ACATGTAAATCATTTAACTT+GGG 0.479195 8:+23416016 None:intergenic
ATCCAAGGTTACTCCCGGCT+TGG 0.479436 8:-23412883 MsG0880043345.01.T01:intron
TCAAATACCAAAGGATTTGA+AGG 0.480721 8:-23411821 MsG0880043345.01.T01:CDS
TGCCTTCAATAATTTACAGT+TGG 0.480996 8:+23412362 None:intergenic
TTGCAATTTAAAATCTTTGG+TGG 0.481068 8:-23414900 MsG0880043345.01.T01:CDS
AAACTTTGGTGTTGTCGCAT+TGG 0.482783 8:+23411857 None:intergenic
GTTTGGATGCCCTGAGGATG+AGG 0.482918 8:-23415993 MsG0880043345.01.T01:CDS
GGAAGCACTTTCACTTGGTA+AGG 0.483124 8:-23412862 MsG0880043345.01.T01:CDS
TACCTGAGCTGACATCTGTT+TGG 0.484277 8:-23416323 MsG0880043345.01.T01:CDS
ATACAAGAAGCCTGGTATGA+TGG 0.484306 8:-23416567 MsG0880043345.01.T01:CDS
TTAAAATCTTTGGTGGTGGA+AGG 0.484514 8:-23414893 MsG0880043345.01.T01:CDS
CAATTTAAAATCTTTGGTGG+TGG 0.490319 8:-23414897 MsG0880043345.01.T01:CDS
GAAGATCAAGATGGAGGTAA+AGG 0.490700 8:-23412099 MsG0880043345.01.T01:CDS
GGAAAACTGTGAAAATTTAG+TGG 0.493091 8:-23414702 MsG0880043345.01.T01:CDS
TACTGGTGTTGTAATAAACT+TGG 0.494796 8:-23410392 MsG0880043345.01.T01:three_prime_UTR
TTTAGTGGAAATTGTTGCAA+AGG 0.495292 8:-23414687 MsG0880043345.01.T01:CDS
ATATATGTACTTACAAGTCA+TGG 0.497829 8:+23411699 None:intergenic
CCATTGGATTAGATCACTCC+TGG 0.498578 8:-23412575 MsG0880043345.01.T01:CDS
TGGAGCTTCGTAGTCTGTCC+CGG 0.501621 8:-23412605 MsG0880043345.01.T01:CDS
GAAATTAAAGAGGAAGATGA+AGG 0.510240 8:-23412039 MsG0880043345.01.T01:CDS
TTTGAATCCAAGGTTACTCC+CGG 0.511178 8:-23412888 MsG0880043345.01.T01:intron
TTATCTGAGCTCAAGTTCAT+CGG 0.511791 8:-23415806 MsG0880043345.01.T01:CDS
GAGGATAAAGACAAAGGTAA+AGG 0.513493 8:-23412015 MsG0880043345.01.T01:CDS
TCGAATTGAAGAAGCTATGC+TGG 0.515064 8:-23415508 MsG0880043345.01.T01:CDS
GACGAAGGTGAACGTGAAGA+TGG 0.516414 8:-23412195 MsG0880043345.01.T01:CDS
CCTCAGTGCATGTAATGTCT+TGG 0.516718 8:+23412398 None:intergenic
ACCGTGAGATACAAGAAGCC+TGG 0.517549 8:-23416575 MsG0880043345.01.T01:CDS
TATCTGAGCTCAAGTTCATC+GGG 0.518139 8:-23415805 MsG0880043345.01.T01:CDS
GCCTTAGAATGGAAGACAAA+CGG 0.519303 8:+23412741 None:intergenic
GATGGAAAAGATAAAGATGA+AGG 0.520606 8:-23412177 MsG0880043345.01.T01:CDS
TCTATGTCAAAGGTTTGAGA+TGG 0.522846 8:+23412660 None:intergenic
CCTAGTATATATGTTTATGC+AGG 0.524081 8:-23410590 MsG0880043345.01.T01:three_prime_UTR
AAGTGAAAGTGCTTCCAAGC+CGG 0.524801 8:+23412869 None:intergenic
ATTTCAACAAATTGTTGGAA+AGG 0.526293 8:-23416154 MsG0880043345.01.T01:CDS
TAAAATCTTTGGTGGTGGAA+GGG 0.527405 8:-23414892 MsG0880043345.01.T01:CDS
TAGATTGGAGAAAGATATTG+GGG 0.528876 8:+23415685 None:intergenic
TTCCAAACAGATGTCAGCTC+AGG 0.529033 8:+23416321 None:intergenic
TATGAAGATGAAAGTCAAGA+TGG 0.531415 8:-23412309 MsG0880043345.01.T01:CDS
GAAGATGTAGTTAAAGTTGA+AGG 0.532076 8:-23412246 MsG0880043345.01.T01:CDS
ACCAGGAAATTCTTCTACAA+CGG 0.535287 8:-23415268 MsG0880043345.01.T01:CDS
GCAACAATGTTAAAGCACCT+TGG 0.535310 8:-23417550 MsG0880043345.01.T01:CDS
GTTACCGTCTTTGAAGAAAG+TGG 0.536767 8:-23415426 MsG0880043345.01.T01:CDS
TTCAAGGAAAGGGCTCATCC+AGG 0.537023 8:+23412557 None:intergenic
GGCTTGGAAGCACTTTCACT+TGG 0.537136 8:-23412867 MsG0880043345.01.T01:CDS
ATCACCATGATGGAAAACTT+TGG 0.537418 8:+23411843 None:intergenic
ATTTCCACTTTCTTCAAAGA+CGG 0.538207 8:+23415422 None:intergenic
CTTCAATTCGATCACTTGTG+GGG 0.544072 8:+23415520 None:intergenic
TTGCTTGTTTGGGATTGTGA+TGG 0.545002 8:-23412522 MsG0880043345.01.T01:CDS
ATGTAATGTCTTGGCGGTTG+AGG 0.547176 8:+23412407 None:intergenic
AACTACACAAGTAGTAGAGA+AGG 0.549467 8:-23417467 MsG0880043345.01.T01:CDS
AGATACAGTGTGGTTAAACT+GGG 0.550009 8:+23416094 None:intergenic
TTGTCACGATACAAATCAGC+AGG 0.551221 8:+23411726 None:intergenic
AACCATATCTCTTTCAACAA+AGG 0.551241 8:+23414953 None:intergenic
AAAATAGTTCAAACTTCCTG+TGG 0.551333 8:+23410509 None:intergenic
AACCATGCTTTATGTAATGT+TGG 0.551979 8:-23410432 MsG0880043345.01.T01:three_prime_UTR
CCTTGGGGAGATCGTAATCA+AGG 0.552152 8:-23417533 MsG0880043345.01.T01:CDS
GTAGTTAAAGTTGAAGGTGA+AGG 0.554556 8:-23412240 MsG0880043345.01.T01:CDS
AGGTGAAAGTGAAATTAAAG+AGG 0.555060 8:-23412049 MsG0880043345.01.T01:CDS
TAATCCAATGGATTCAAGCC+GGG 0.555361 8:+23412587 None:intergenic
TAAATTATTGAAGGCAGTAG+TGG 0.557447 8:-23412355 MsG0880043345.01.T01:CDS
ACCAGGCTTCTTGTATCTCA+CGG 0.557989 8:+23416574 None:intergenic
TAAAGAGGAAGATGAAGGTG+AGG 0.560007 8:-23412034 MsG0880043345.01.T01:CDS
GATTTCAAGTTGATTAGGAA+AGG 0.561131 8:+23414827 None:intergenic
ATGTCCACTTGAATCAGAGC+TGG 0.566134 8:+23417331 None:intergenic
AACGACACTTGTTTCAAACA+TGG 0.566931 8:+23411883 None:intergenic
AATTTCACCTGTATTTCCAC+AGG 0.568065 8:-23410525 MsG0880043345.01.T01:three_prime_UTR
GCGAAAATGTAATTCTGTTG+AGG 0.569251 8:-23414795 MsG0880043345.01.T01:CDS
GAAATCGAAGAGGAAGATGA+AGG 0.573334 8:-23412123 MsG0880043345.01.T01:CDS
GAAATCGAAGAGGAAGATGA+AGG 0.573334 8:-23412153 MsG0880043345.01.T01:CDS
GGAATGCAGTATGAAGATAA+GGG 0.573752 8:-23410759 MsG0880043345.01.T01:three_prime_UTR
CAGTGCATGTAATGTCTTGG+CGG 0.575713 8:+23412401 None:intergenic
TATATGTACTTACAAGTCAT+GGG 0.575718 8:+23411700 None:intergenic
CTAATCCAATGGATTCAAGC+CGG 0.575879 8:+23412586 None:intergenic
GATTTGAAGGTGACAATCGA+TGG 0.576305 8:-23411808 MsG0880043345.01.T01:CDS
AGGAAAGGAAGCAAATGAGA+GGG 0.576756 8:+23414842 None:intergenic
AGGTGAAGATGAAATGAAAG+AGG 0.576793 8:-23412079 MsG0880043345.01.T01:CDS
TAGGTAGTAGAGCCTTAGAA+TGG 0.577089 8:+23412730 None:intergenic
TGGATATAGATATGAAAATG+AGG 0.579092 8:-23412271 MsG0880043345.01.T01:CDS
CATGTAAATCATTTAACTTG+GGG 0.581748 8:+23416017 None:intergenic
GAAGGTGAGGATAAAGACAA+AGG 0.582999 8:-23412021 MsG0880043345.01.T01:CDS
GAAGGTGAAGATCAAGATGG+AGG 0.586024 8:-23412105 MsG0880043345.01.T01:CDS
CATGAAAACTCTGCAAAACG+AGG 0.590070 8:+23412781 None:intergenic
AGTATATATGTTTATGCAGG+AGG 0.590219 8:-23410587 MsG0880043345.01.T01:three_prime_UTR
CAAAAGAGATCAAATTTGAG+TGG 0.590338 8:-23417426 MsG0880043345.01.T01:CDS
TAAATCATCATTTGAACAGG+AGG 0.591482 8:+23415325 None:intergenic
CAATATGAATGAAGTTGACA+TGG 0.593381 8:-23410469 MsG0880043345.01.T01:three_prime_UTR
ATATGTTTATGCAGGAGGAG+AGG 0.593408 8:-23410582 MsG0880043345.01.T01:three_prime_UTR
TACGAGAAATGGAAATAGGA+AGG 0.594555 8:-23415910 MsG0880043345.01.T01:CDS
GATGAAGGTGAAGATCAAGA+TGG 0.597086 8:-23412108 MsG0880043345.01.T01:CDS
AAGATAAGGGTATAACATCA+GGG 0.597328 8:-23410746 MsG0880043345.01.T01:three_prime_UTR
CACAGTTCACACGAGTGTCA+GGG 0.597751 8:-23414479 MsG0880043345.01.T01:CDS
CCAGGAGTGATCTAATCCAA+TGG 0.598384 8:+23412575 None:intergenic
CAAACATGGAAACTTCAAAG+TGG 0.598706 8:+23411897 None:intergenic
GTTTGGAAGAAGAATTGCCA+AGG 0.599462 8:-23416306 MsG0880043345.01.T01:CDS
CTATGTCAAAGGTTTGAGAT+GGG 0.599575 8:+23412661 None:intergenic
TTACTCTGAATTATTCATTG+TGG 0.600034 8:-23416044 MsG0880043345.01.T01:CDS
TTATATCGCCAAAGTAGACC+AGG 0.600442 8:-23415285 MsG0880043345.01.T01:CDS
AAGTCTGGAAAAGCTTTGTG+TGG 0.601600 8:-23414723 MsG0880043345.01.T01:CDS
TAGGAAAGGAAGCAAATGAG+AGG 0.602011 8:+23414841 None:intergenic
TTTCAAAATCTGCTAATGGT+CGG 0.609427 8:-23416273 MsG0880043345.01.T01:intron
CAAGACATTACATGCACTGA+GGG 0.610826 8:-23412397 MsG0880043345.01.T01:CDS
TATACAAAGACTGGACCTGA+AGG 0.612125 8:-23414761 MsG0880043345.01.T01:CDS
AAAATAGTAGAGGAGCAAGA+AGG 0.613178 8:-23417493 MsG0880043345.01.T01:CDS
GATGGAGATGAAGAGACAGA+TGG 0.614529 8:-23412291 MsG0880043345.01.T01:CDS
AGATGAAGGTGAAATCGAAG+AGG 0.616536 8:-23412163 MsG0880043345.01.T01:CDS
ATCACAATCCCAAACAAGCA+AGG 0.616553 8:+23412524 None:intergenic
GCTCAAGTTCATCGGGTCAG+AGG 0.616577 8:-23415798 MsG0880043345.01.T01:CDS
GAAGAGGAAGATGAAGGTGA+AGG 0.616672 8:-23412147 MsG0880043345.01.T01:CDS
TACATTCACCCTCATCCTCA+GGG 0.616909 8:+23415984 None:intergenic
TTTGGATGCCCTGAGGATGA+GGG 0.618730 8:-23415992 MsG0880043345.01.T01:CDS
AAGGCAGTAGTGGCTAAAGA+GGG 0.620960 8:-23412345 MsG0880043345.01.T01:CDS
TCACAACTATGATCTTCTCA+AGG 0.633480 8:+23415588 None:intergenic
AGGTGAAGGTGAAATCGAAG+AGG 0.635046 8:-23412133 MsG0880043345.01.T01:CDS
GTAGTAGAGAAGGAGCAAGA+AGG 0.635726 8:-23417457 MsG0880043345.01.T01:CDS
TCATGGTGATCAAATACCAA+AGG 0.636331 8:-23411830 MsG0880043345.01.T01:CDS
AGCCAACATTACATAAAGCA+TGG 0.636986 8:+23410430 None:intergenic
GCAAAGGACGAAACAGCCAC+CGG 0.638179 8:-23414671 MsG0880043345.01.T01:CDS
CAACACTATTGACAAATCAA+GGG 0.645808 8:-23410723 MsG0880043345.01.T01:three_prime_UTR
CGAAATGTCATACACACATG+TGG 0.647817 8:+23410360 None:intergenic
ATGAAAACTCTGCAAAACGA+GGG 0.649255 8:+23412782 None:intergenic
GATATGGTTCAAGTCAGCGA+TGG 0.664186 8:-23414939 MsG0880043345.01.T01:CDS
TCATGCAACAGTTTGAGGAG+AGG 0.666480 8:-23411753 MsG0880043345.01.T01:CDS
GAAGCCGAGATGATTGAGCA+AGG 0.667380 8:-23412837 MsG0880043345.01.T01:CDS
AATTGTTGGAAAGGAAGACA+CGG 0.672108 8:-23416145 MsG0880043345.01.T01:CDS
GCATAAACATATATACTAGG+AGG 0.676404 8:+23410593 None:intergenic
CGCTATGAAGATGAAGACGA+AGG 0.677467 8:-23412210 MsG0880043345.01.T01:CDS
TCAAGGTTGAGTAAGACTCG+TGG 0.678548 8:-23410780 MsG0880043345.01.T01:three_prime_UTR
CCTTGATTACGATCTCCCCA+AGG 0.679771 8:+23417533 None:intergenic
GAAATGAAAGAGGATGATGA+AGG 0.681737 8:-23412069 MsG0880043345.01.T01:CDS
TAACTTTAAAAGATACAGTG+TGG 0.687814 8:+23416084 None:intergenic
AACAATGTTAAAGCACCTTG+GGG 0.688183 8:-23417548 MsG0880043345.01.T01:CDS
ATTGTTGGAAAGGAAGACAC+GGG 0.691319 8:-23416144 MsG0880043345.01.T01:CDS
GTTCATGCGAAATATTTCGG+AGG 0.697205 8:-23415359 MsG0880043345.01.T01:CDS
TTAGAGAAAGACACAGTGGA+CGG 0.700280 8:+23412483 None:intergenic
CCAAGACATTACATGCACTG+AGG 0.710319 8:-23412398 MsG0880043345.01.T01:CDS
GATACAGTGTGGTTAAACTG+GGG 0.717760 8:+23416095 None:intergenic
ACATGTGTTTGGATGCCCTG+AGG 0.724395 8:-23415999 MsG0880043345.01.T01:CDS
CAGGTTAGAGAAAGACACAG+TGG 0.756898 8:+23412479 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATTAATTAATAAAAAAT+TGG + Chr8:23414538-23414557 None:intergenic 0.0%
!! TAATTAATTAATAAAAAATT+GGG + Chr8:23414537-23414556 None:intergenic 0.0%
!! AAATATAAAATTTACTTTCA+CGG - Chr8:23414291-23414310 MsG0880043345.01.T01:intron 10.0%
!! TTAATTCATAATTTATTGAT+TGG + Chr8:23410698-23410717 None:intergenic 10.0%
!!! GAAAGTAAATTTTATATTTA+TGG + Chr8:23414290-23414309 None:intergenic 10.0%
!!! TAATTCATAATTTATTGATT+GGG + Chr8:23410697-23410716 None:intergenic 10.0%
!! AATACACATAAATATGTATT+AGG + Chr8:23413562-23413581 None:intergenic 15.0%
!! ACATAATTTATTTAGTAAAC+AGG - Chr8:23411012-23411031 MsG0880043345.01.T01:intron 15.0%
!! ACCGTAATATAATATAATAA+CGG + Chr8:23410828-23410847 None:intergenic 15.0%
!! CAAATGTTATTAAAATAAGA+TGG + Chr8:23411176-23411195 None:intergenic 15.0%
!! GAATTAATAATACTTAATAG+AGG + Chr8:23416215-23416234 None:intergenic 15.0%
!! TAAATATCAATAATAGTGTT+TGG - Chr8:23414047-23414066 MsG0880043345.01.T01:intron 15.0%
!! TATCAACAGATATAATTAAT+TGG + Chr8:23412671-23412690 None:intergenic 15.0%
!! TCCGTTATTATATTATATTA+CGG - Chr8:23410824-23410843 MsG0880043345.01.T01:intron 15.0%
!! TTAAGTATTATTAATTCTCA+TGG - Chr8:23416218-23416237 MsG0880043345.01.T01:intron 15.0%
!! TTGACTTTATGAATATATTT+GGG - Chr8:23416722-23416741 MsG0880043345.01.T01:intron 15.0%
!!! AAGAAATTATTTCTACTATT+TGG - Chr8:23414582-23414601 MsG0880043345.01.T01:CDS 15.0%
!!! ATGTATTAGGTTTTTTTATT+GGG + Chr8:23413549-23413568 None:intergenic 15.0%
!!! ATTACAAATAACTTGTATTT+TGG - Chr8:23413896-23413915 MsG0880043345.01.T01:intron 15.0%
!!! ATTTTATTACATTTAAAGAC+AGG + Chr8:23411120-23411139 None:intergenic 15.0%
!!! GAACTATTTTTAATTTAGTA+AGG - Chr8:23417343-23417362 MsG0880043345.01.T01:CDS 15.0%
!!! GTGAATAAATAATTCAATTT+TGG + Chr8:23412204-23412223 None:intergenic 15.0%
!!! TATGTATTAGGTTTTTTTAT+TGG + Chr8:23413550-23413569 None:intergenic 15.0%
!!! TTACAAATAACTTGTATTTT+GGG - Chr8:23413897-23413916 MsG0880043345.01.T01:intron 15.0%
!!! TTTGACTTTATGAATATATT+TGG - Chr8:23416721-23416740 MsG0880043345.01.T01:intron 15.0%
!!! TTTTTGCAATTTAAAATCTT+TGG - Chr8:23412936-23412955 MsG0880043345.01.T01:intron 15.0%
!! AACCAAACATATTCATAAAA+GGG + Chr8:23416926-23416945 None:intergenic 20.0%
!! AATAAATAAGAAAGATGAGA+AGG + Chr8:23414932-23414951 None:intergenic 20.0%
!! ACAAAAAATGAAATAGATTG+AGG - Chr8:23414654-23414673 MsG0880043345.01.T01:CDS 20.0%
!! ATATTTGTTTATACAAAGAC+TGG - Chr8:23413069-23413088 MsG0880043345.01.T01:intron 20.0%
!! ATCAATTAGAAAAATAGTAG+AGG - Chr8:23410336-23410355 MsG0880043345.01.T01:three_prime_UTR 20.0%
!! ATGATATTTATGTCTTCAAA+TGG - Chr8:23410726-23410745 MsG0880043345.01.T01:three_prime_UTR 20.0%
!! ATTCATAAAGTCAAAAATTC+AGG + Chr8:23416716-23416735 None:intergenic 20.0%
!! CAAAAAATGAAATAGATTGA+GGG - Chr8:23414655-23414674 MsG0880043345.01.T01:CDS 20.0%
!! TAAAAACAAAAGCTTCAATT+GGG + Chr8:23411489-23411508 None:intergenic 20.0%
!! TAAATTCCATAACTTCAAAA+AGG + Chr8:23413232-23413251 None:intergenic 20.0%
!! TAAGCTATGTTATTATACTA+TGG - Chr8:23413581-23413600 MsG0880043345.01.T01:intron 20.0%
!! TATTAATATGCAATTTACGA+TGG + Chr8:23412814-23412833 None:intergenic 20.0%
!! TGATACATTGTTTATATGAA+TGG - Chr8:23413433-23413452 MsG0880043345.01.T01:intron 20.0%
!! TTAAATGATTTACATGTGTT+TGG - Chr8:23411829-23411848 MsG0880043345.01.T01:CDS 20.0%
!! TTTAAAAAACTTGAATCAAC+TGG - Chr8:23411394-23411413 MsG0880043345.01.T01:intron 20.0%
!!! ACATGTAAATCATTTAACTT+GGG + Chr8:23411826-23411845 None:intergenic 20.0%
!!! ATGTTGAAGTATTTTTAATG+TGG + Chr8:23412728-23412747 None:intergenic 20.0%
!!! ATGTTGTATTTCACTAATTT+TGG + Chr8:23411989-23412008 None:intergenic 20.0%
!!! ATGTTTTGCAGAAAAATATT+AGG + Chr8:23413717-23413736 None:intergenic 20.0%
!!! CAAAACATTTTAGTTTTAGA+TGG - Chr8:23413729-23413748 MsG0880043345.01.T01:intron 20.0%
!!! GGAAATTATTGTTGTTTAAA+TGG + Chr8:23412793-23412812 None:intergenic 20.0%
!!! TATGTACAATTCTTTTAGAT+TGG + Chr8:23412172-23412191 None:intergenic 20.0%
!!! TCTTATTTATTTTGAATCCA+AGG - Chr8:23414941-23414960 MsG0880043345.01.T01:CDS 20.0%
!!! TGTTGTATTTCACTAATTTT+GGG + Chr8:23411988-23412007 None:intergenic 20.0%
!!! TTTAGTTGATAATTTGCATT+AGG - Chr8:23416452-23416471 MsG0880043345.01.T01:CDS 20.0%
! AAACAACGAAGAATATTAGA+TGG + Chr8:23411377-23411396 None:intergenic 25.0%
! AAACAGGTTTACATAAAGTT+AGG - Chr8:23411028-23411047 MsG0880043345.01.T01:intron 25.0%
! AAAGGTTTAGAAATCATAAC+AGG - Chr8:23416565-23416584 MsG0880043345.01.T01:CDS 25.0%
! AATTTACGAGAAATGGAAAT+AGG - Chr8:23411925-23411944 MsG0880043345.01.T01:CDS 25.0%
! AATTTCTTACCATGGTAAAA+TGG + Chr8:23414570-23414589 None:intergenic 25.0%
! ACAGGATTTCATATATATAG+AGG - Chr8:23414780-23414799 MsG0880043345.01.T01:CDS 25.0%
! ACATAAAGTTAGGTAAATGA+GGG - Chr8:23411038-23411057 MsG0880043345.01.T01:intron 25.0%
! AGAAAAGATCAAAATAACTC+AGG + Chr8:23416421-23416440 None:intergenic 25.0%
! AGTCTTTATAAACTCTAATC+AGG + Chr8:23413477-23413496 None:intergenic 25.0%
! AGTGTTTGGATAAACAATTT+CGG - Chr8:23414061-23414080 MsG0880043345.01.T01:intron 25.0%
! ATATATGTACTTACAAGTCA+TGG + Chr8:23416143-23416162 None:intergenic 25.0%
! ATTTCAACAAATTGTTGGAA+AGG - Chr8:23411685-23411704 MsG0880043345.01.T01:intron 25.0%
! ATTTCCATTTCTCGTAAATT+GGG + Chr8:23411925-23411944 None:intergenic 25.0%
! CACATGTAAATCATTTAACT+TGG + Chr8:23411827-23411846 None:intergenic 25.0%
! CTAAAAACAAAAGCTTCAAT+TGG + Chr8:23411490-23411509 None:intergenic 25.0%
! GAACCAAACATATTCATAAA+AGG + Chr8:23416927-23416946 None:intergenic 25.0%
! GTAGAAATAATTTCTTACCA+TGG + Chr8:23414578-23414597 None:intergenic 25.0%
! TAAAATGAGTGTTATGTTCA+TGG - Chr8:23417506-23417525 MsG0880043345.01.T01:CDS 25.0%
! TAAATTGCAAAAACATCTGT+CGG + Chr8:23412929-23412948 None:intergenic 25.0%
! TACATAAAGTTAGGTAAATG+AGG - Chr8:23411037-23411056 MsG0880043345.01.T01:intron 25.0%
! TAGTTCAATGGAAAAAGTAA+TGG - Chr8:23412278-23412297 MsG0880043345.01.T01:CDS 25.0%
! TATAAAGCTTGAACAATCTT+AGG + Chr8:23414706-23414725 None:intergenic 25.0%
! TATATGTACTTACAAGTCAT+GGG + Chr8:23416142-23416161 None:intergenic 25.0%
! TATTTCCATTTCTCGTAAAT+TGG + Chr8:23411926-23411945 None:intergenic 25.0%
! TGATATTCTAGTAGTTTAGA+TGG - Chr8:23414445-23414464 MsG0880043345.01.T01:CDS 25.0%
! TGGATATAGATATGAAAATG+AGG - Chr8:23415568-23415587 MsG0880043345.01.T01:CDS 25.0%
! TGTTAATTATCATTGCATGT+TGG - Chr8:23413832-23413851 MsG0880043345.01.T01:intron 25.0%
! TTACTCTGAATTATTCATTG+TGG - Chr8:23411795-23411814 MsG0880043345.01.T01:CDS 25.0%
! TTAGATTGGAGAAAGATATT+GGG + Chr8:23412158-23412177 None:intergenic 25.0%
! TTTAGATTGGAGAAAGATAT+TGG + Chr8:23412159-23412178 None:intergenic 25.0%
! TTTGAAGAAAGTGGAAATAT+CGG - Chr8:23412422-23412441 MsG0880043345.01.T01:CDS 25.0%
!! AAAACTTGGAAGTTTTTACT+CGG - Chr8:23415913-23415932 MsG0880043345.01.T01:CDS 25.0%
!! AAGCTATTTCATCAATGAAA+AGG + Chr8:23410978-23410997 None:intergenic 25.0%
!! AATTTCTTCATTTTCTTCTC+CGG + Chr8:23413190-23413209 None:intergenic 25.0%
!! ATTCATGAAACTTGAGATTT+TGG - Chr8:23415874-23415893 MsG0880043345.01.T01:CDS 25.0%
!! ATTTTAAATTTCAGACGTCA+AGG - Chr8:23417042-23417061 MsG0880043345.01.T01:intron 25.0%
!! CTTAAAATACCATTTTACCA+TGG - Chr8:23414558-23414577 MsG0880043345.01.T01:CDS 25.0%
!! GTTGTATTTCACTAATTTTG+GGG + Chr8:23411987-23412006 None:intergenic 25.0%
!! TAACTTTAAAAGATACAGTG+TGG + Chr8:23411758-23411777 None:intergenic 25.0%
!! TCCAAACTTTGAAAACAAAA+AGG + Chr8:23416986-23417005 None:intergenic 25.0%
!! TCTAAAATCTTTATCAAGTC+TGG - Chr8:23412359-23412378 MsG0880043345.01.T01:CDS 25.0%
!! TTGCAATTTAAAATCTTTGG+TGG - Chr8:23412939-23412958 MsG0880043345.01.T01:intron 25.0%
!! TTTTCACTGCTTTGTAAATA+TGG - Chr8:23416683-23416702 MsG0880043345.01.T01:intron 25.0%
!! TTTTGTACAATCTATGTCAA+AGG + Chr8:23415192-23415211 None:intergenic 25.0%
!!! AAGTCTGGAATGTTTTTTTT+CGG - Chr8:23412374-23412393 MsG0880043345.01.T01:CDS 25.0%
!!! CATGTAAATCATTTAACTTG+GGG + Chr8:23411825-23411844 None:intergenic 25.0%
!!! TATGAATATATTTGGGTTGA+GGG - Chr8:23416729-23416748 MsG0880043345.01.T01:intron 25.0%
!!! TCCTTTTTGTTTTCAAAGTT+TGG - Chr8:23416982-23417001 MsG0880043345.01.T01:intron 25.0%
!!! TGAAGCTTTTGTTTTTAGAA+GGG - Chr8:23411492-23411511 MsG0880043345.01.T01:intron 25.0%
!!! TTATGAATATATTTGGGTTG+AGG - Chr8:23416728-23416747 MsG0880043345.01.T01:intron 25.0%
!!! TTATTTTTTGTGCTGCTTTA+TGG - Chr8:23414840-23414859 MsG0880043345.01.T01:CDS 25.0%
!!! TTGAAGCTTTTGTTTTTAGA+AGG - Chr8:23411491-23411510 MsG0880043345.01.T01:intron 25.0%
!!! TTTCTTTTTTTGTTGAAGTG+TGG - Chr8:23417141-23417160 MsG0880043345.01.T01:intron 25.0%
AAAATAGTTCAAACTTCCTG+TGG + Chr8:23417333-23417352 None:intergenic 30.0%
AAAGATGAGAAGGCAAAAAT+CGG + Chr8:23414922-23414941 None:intergenic 30.0%
AAATTGCAAAAACATCTGTC+GGG + Chr8:23412928-23412947 None:intergenic 30.0%
AACCATATCTCTTTCAACAA+AGG + Chr8:23412889-23412908 None:intergenic 30.0%
AACCATGCTTTATGTAATGT+TGG - Chr8:23417407-23417426 MsG0880043345.01.T01:CDS 30.0%
ACAAAGCAGTGAAAAAATGT+TGG + Chr8:23416678-23416697 None:intergenic 30.0%
ACATTAGACTCATGATTGTT+AGG + Chr8:23410796-23410815 None:intergenic 30.0%
ACCTGATAAAGCTTGATATA+AGG - Chr8:23415378-23415397 MsG0880043345.01.T01:CDS 30.0%
ACTTATTGTAGAATCTTGTC+AGG - Chr8:23411661-23411680 MsG0880043345.01.T01:intron 30.0%
AGCCAACTGTAAATTATTGA+AGG - Chr8:23415475-23415494 MsG0880043345.01.T01:CDS 30.0%
AGGTGAAAGTGAAATTAAAG+AGG - Chr8:23415790-23415809 MsG0880043345.01.T01:CDS 30.0%
AGTATATATGTTTATGCAGG+AGG - Chr8:23417252-23417271 MsG0880043345.01.T01:intron 30.0%
AGTTGTGAATTGTAGTTCAA+TGG - Chr8:23412266-23412285 MsG0880043345.01.T01:CDS 30.0%
ATACAAAACTATGATCTACC+TGG + Chr8:23414629-23414648 None:intergenic 30.0%
ATACTTAATAGAGGTGAAGT+TGG + Chr8:23416206-23416225 None:intergenic 30.0%
ATATAGAGACAGAATAGGTT+AGG + Chr8:23411089-23411108 None:intergenic 30.0%
ATCTACATATGCGAAGAATT+TGG - Chr8:23416371-23416390 MsG0880043345.01.T01:CDS 30.0%
ATGTCTACATGAATTGTCTA+TGG - Chr8:23417188-23417207 MsG0880043345.01.T01:intron 30.0%
ATTTCCACTTTCTTCAAAGA+CGG + Chr8:23412420-23412439 None:intergenic 30.0%
CAAAAGAGATCAAATTTGAG+TGG - Chr8:23410413-23410432 MsG0880043345.01.T01:three_prime_UTR 30.0%
CAAAGCAGTGAAAAAATGTT+GGG + Chr8:23416677-23416696 None:intergenic 30.0%
CAACACTATTGACAAATCAA+GGG - Chr8:23417116-23417135 MsG0880043345.01.T01:intron 30.0%
CAATATGAATGAAGTTGACA+TGG - Chr8:23417370-23417389 MsG0880043345.01.T01:CDS 30.0%
CACTAAATCATCATTTGAAC+AGG + Chr8:23412520-23412539 None:intergenic 30.0%
CAGGAATTTCAACAAATTGT+TGG - Chr8:23411680-23411699 MsG0880043345.01.T01:intron 30.0%
CCTAATCAACTTGAAATCAT+TGG - Chr8:23413017-23413036 MsG0880043345.01.T01:intron 30.0%
CCTAGTATATATGTTTATGC+AGG - Chr8:23417249-23417268 MsG0880043345.01.T01:intron 30.0%
CCTGCATAAACATATATACT+AGG + Chr8:23417252-23417271 None:intergenic 30.0%
CTTTGATATGATTAAGTGAC+AGG - Chr8:23413937-23413956 MsG0880043345.01.T01:intron 30.0%
GAAATTAAAGAGGAAGATGA+AGG - Chr8:23415800-23415819 MsG0880043345.01.T01:CDS 30.0%
GAAGATGTAGTTAAAGTTGA+AGG - Chr8:23415593-23415612 MsG0880043345.01.T01:CDS 30.0%
GACAATTCATGTAGACATAA+AGG + Chr8:23417186-23417205 None:intergenic 30.0%
GAGATTTCAAAATCTGCTAA+TGG - Chr8:23411562-23411581 MsG0880043345.01.T01:intron 30.0%
GATGGAAAAGATAAAGATGA+AGG - Chr8:23415662-23415681 MsG0880043345.01.T01:CDS 30.0%
GATGGAACACAATGATAATA+TGG + Chr8:23416498-23416517 None:intergenic 30.0%
GCATAAACATATATACTAGG+AGG + Chr8:23417249-23417268 None:intergenic 30.0%
GGAAAACTGTGAAAATTTAG+TGG - Chr8:23413137-23413156 MsG0880043345.01.T01:intron 30.0%
GTCAAAACTATTCATGAGAA+CGG + Chr8:23416956-23416975 None:intergenic 30.0%
TAAATCATCATTTGAACAGG+AGG + Chr8:23412517-23412536 None:intergenic 30.0%
TAAATTATTGAAGGCAGTAG+TGG - Chr8:23415484-23415503 MsG0880043345.01.T01:CDS 30.0%
TACAAAACTATGATCTACCT+GGG + Chr8:23414628-23414647 None:intergenic 30.0%
TAGATTGGAGAAAGATATTG+GGG + Chr8:23412157-23412176 None:intergenic 30.0%
TATGAAGATGAAAGTCAAGA+TGG - Chr8:23415530-23415549 MsG0880043345.01.T01:CDS 30.0%
TATGTAGATGACAGAAACAA+AGG + Chr8:23416360-23416379 None:intergenic 30.0%
TCAAATACCAAAGGATTTGA+AGG - Chr8:23416018-23416037 MsG0880043345.01.T01:CDS 30.0%
TGCATATAAAGAAGATGCAT+TGG - Chr8:23413788-23413807 MsG0880043345.01.T01:intron 30.0%
TGCCTTCAATAATTTACAGT+TGG + Chr8:23415480-23415499 None:intergenic 30.0%
TTACTTTCACGGTTATTACA+AGG - Chr8:23414302-23414321 MsG0880043345.01.T01:intron 30.0%
TTGACAGTTCAACTAAAACA+AGG + Chr8:23413869-23413888 None:intergenic 30.0%
TTGTTTAGTAAGGATGAGTT+AGG - Chr8:23413523-23413542 MsG0880043345.01.T01:intron 30.0%
TTTAGTGGAAATTGTTGCAA+AGG - Chr8:23413152-23413171 MsG0880043345.01.T01:intron 30.0%
TTTCAAAATCTGCTAATGGT+CGG - Chr8:23411566-23411585 MsG0880043345.01.T01:intron 30.0%
TTTCTATCAATTGAGTGAGA+AGG - Chr8:23416310-23416329 MsG0880043345.01.T01:CDS 30.0%
! AAACTTGGAAGTTTTTACTC+GGG - Chr8:23415914-23415933 MsG0880043345.01.T01:CDS 30.0%
! AAGATAAGGGTATAACATCA+GGG - Chr8:23417093-23417112 MsG0880043345.01.T01:intron 30.0%
! AATGTTGGGACATCAAATTT+TGG + Chr8:23416663-23416682 None:intergenic 30.0%
! ATTTAAATAGACTAGCTGTG+CGG - Chr8:23410933-23410952 MsG0880043345.01.T01:intron 30.0%
! CAAATGGACTTGATAGATTA+AGG - Chr8:23410742-23410761 MsG0880043345.01.T01:three_prime_UTR 30.0%
! CAATCTGCTAAATGATTTGT+TGG - Chr8:23413636-23413655 MsG0880043345.01.T01:intron 30.0%
! CAATTTAAAATCTTTGGTGG+TGG - Chr8:23412942-23412961 MsG0880043345.01.T01:intron 30.0%
! CTGTCACTTAATCATATCAA+AGG + Chr8:23413939-23413958 None:intergenic 30.0%
! GAGTAAAAACTTCCAAGTTT+TGG + Chr8:23415914-23415933 None:intergenic 30.0%
! TAGAAAAACCCTTTTTACTG+AGG + Chr8:23410655-23410674 None:intergenic 30.0%
! TAGTAGTTTAGATGGCATTT+TGG - Chr8:23414453-23414472 MsG0880043345.01.T01:CDS 30.0%
! TCCTTATATCAAGCTTTATC+AGG + Chr8:23415382-23415401 None:intergenic 30.0%
! TGCCCTTTTATGAATATGTT+TGG - Chr8:23416921-23416940 MsG0880043345.01.T01:intron 30.0%
!! AACCTTGAATGTTTTTACTC+AGG - Chr8:23410466-23410485 MsG0880043345.01.T01:three_prime_UTR 30.0%
!! ATGAATATATTTGGGTTGAG+GGG - Chr8:23416730-23416749 MsG0880043345.01.T01:intron 30.0%
!! CCAATGATTTCAAGTTGATT+AGG + Chr8:23413020-23413039 None:intergenic 30.0%
!! GATTTCAAGTTGATTAGGAA+AGG + Chr8:23413015-23413034 None:intergenic 30.0%
!! TACTGGTGTTGTAATAAACT+TGG - Chr8:23417447-23417466 MsG0880043345.01.T01:CDS 30.0%
!! TTCGAAGATTTTCAAGGAAA+GGG + Chr8:23415295-23415314 None:intergenic 30.0%
!! TTTAGCTTGTTACCAAAACT+TGG - Chr8:23415899-23415918 MsG0880043345.01.T01:CDS 30.0%
!!! AGTCTGGAATGTTTTTTTTC+GGG - Chr8:23412375-23412394 MsG0880043345.01.T01:CDS 30.0%
!!! CATTAAGTTTTTTGTTGCTG+AGG + Chr8:23412229-23412248 None:intergenic 30.0%
!!! CATTTTAAGTTTTCTGGCAA+GGG + Chr8:23411633-23411652 None:intergenic 30.0%
!!! CTCAAGCATTTTAAGTTTTC+TGG + Chr8:23411639-23411658 None:intergenic 30.0%
!!! TTAGCAGATTTTGAAATCTC+AGG + Chr8:23411562-23411581 None:intergenic 30.0%
!!! TTGGAACTGTTTTAGCTTTT+AGG - Chr8:23417001-23417020 MsG0880043345.01.T01:intron 30.0%
AAAATAGTAGAGGAGCAAGA+AGG - Chr8:23410346-23410365 MsG0880043345.01.T01:three_prime_UTR 35.0%
AAACGAGGGAATTCAATTCT+TGG + Chr8:23415046-23415065 None:intergenic 35.0%
AACATGCAAAAATTCGCTCA+AGG - Chr8:23412453-23412472 MsG0880043345.01.T01:CDS 35.0%
AACGACACTTGTTTCAAACA+TGG + Chr8:23415959-23415978 None:intergenic 35.0%
AACTACACAAGTAGTAGAGA+AGG - Chr8:23410372-23410391 MsG0880043345.01.T01:three_prime_UTR 35.0%
AACTTCAAAAAGGTTGCACT+TGG + Chr8:23413222-23413241 None:intergenic 35.0%
AAGAATTTCCTGGTCTACTT+TGG + Chr8:23412565-23412584 None:intergenic 35.0%
AAGATACAGTGTGGTTAAAC+TGG + Chr8:23411749-23411768 None:intergenic 35.0%
AATCCTAGTGTACAGTCTTA+GGG - Chr8:23413605-23413624 MsG0880043345.01.T01:intron 35.0%
AATTGTTGGAAAGGAAGACA+CGG - Chr8:23411694-23411713 MsG0880043345.01.T01:intron 35.0%
AATTTCACCTGTATTTCCAC+AGG - Chr8:23417314-23417333 MsG0880043345.01.T01:intron 35.0%
ACCAGGAAATTCTTCTACAA+CGG - Chr8:23412571-23412590 MsG0880043345.01.T01:CDS 35.0%
ACCTAGCATTAAAAAGCTTG+TGG - Chr8:23415127-23415146 MsG0880043345.01.T01:intron 35.0%
ACTTCAAAAAGGTTGCACTT+GGG + Chr8:23413221-23413240 None:intergenic 35.0%
AGATACAGTGTGGTTAAACT+GGG + Chr8:23411748-23411767 None:intergenic 35.0%
AGCATTTGTCTCACTTGAAA+AGG - Chr8:23413404-23413423 MsG0880043345.01.T01:intron 35.0%
AGCCAACATTACATAAAGCA+TGG + Chr8:23417412-23417431 None:intergenic 35.0%
AGGCTCTTGTGAAAAAAACA+GGG - Chr8:23416820-23416839 MsG0880043345.01.T01:intron 35.0%
AGGTGAAGATGAAATGAAAG+AGG - Chr8:23415760-23415779 MsG0880043345.01.T01:CDS 35.0%
ATGAAAACTCTGCAAAACGA+GGG + Chr8:23415060-23415079 None:intergenic 35.0%
ATGTTAACGCCTCAGTAAAA+AGG - Chr8:23410643-23410662 MsG0880043345.01.T01:three_prime_UTR 35.0%
ATTGTCACCTTCAAATCCTT+TGG + Chr8:23416028-23416047 None:intergenic 35.0%
CAAACATGGAAACTTCAAAG+TGG + Chr8:23415945-23415964 None:intergenic 35.0%
CACATGTGTGTATGACATTT+CGG - Chr8:23417480-23417499 MsG0880043345.01.T01:CDS 35.0%
CGAGAGAAAAATTCCATCTT+GGG + Chr8:23410544-23410563 None:intergenic 35.0%
CTCCTTTGTTGAAAGAGATA+TGG - Chr8:23412884-23412903 MsG0880043345.01.T01:intron 35.0%
CTTGTGAAAAAAACAGGGTA+AGG - Chr8:23416825-23416844 MsG0880043345.01.T01:intron 35.0%
GAAATGAAAGAGGATGATGA+AGG - Chr8:23415770-23415789 MsG0880043345.01.T01:CDS 35.0%
GACTTGATAGATTAAGGTAG+TGG - Chr8:23410748-23410767 MsG0880043345.01.T01:three_prime_UTR 35.0%
GAGCCAATATACTAAGTATG+TGG + Chr8:23416251-23416270 None:intergenic 35.0%
GAGGATAAAGACAAAGGTAA+AGG - Chr8:23415824-23415843 MsG0880043345.01.T01:CDS 35.0%
GCAACACTATTGACAAATCA+AGG - Chr8:23417115-23417134 MsG0880043345.01.T01:intron 35.0%
GCAAGTATGAGAAAAACTTC+AGG + Chr8:23414896-23414915 None:intergenic 35.0%
GCACCACATACTTAGTATAT+TGG - Chr8:23416245-23416264 MsG0880043345.01.T01:intron 35.0%
GCGAAAATGTAATTCTGTTG+AGG - Chr8:23413044-23413063 MsG0880043345.01.T01:intron 35.0%
GGAATGCAGTATGAAGATAA+GGG - Chr8:23417080-23417099 MsG0880043345.01.T01:intron 35.0%
GTAGTTAAAGTTGAAGGTGA+AGG - Chr8:23415599-23415618 MsG0880043345.01.T01:CDS 35.0%
GTTGCATATAGAGACAGAAT+AGG + Chr8:23411094-23411113 None:intergenic 35.0%
GTTGCGAAAAAATTCAGCTT+GGG + Chr8:23413333-23413352 None:intergenic 35.0%
TACGAGAAATGGAAATAGGA+AGG - Chr8:23411929-23411948 MsG0880043345.01.T01:CDS 35.0%
TAGATACGATGCTTGATCAA+TGG + Chr8:23413755-23413774 None:intergenic 35.0%
TCACAACTATGATCTTCTCA+AGG + Chr8:23412254-23412273 None:intergenic 35.0%
TCAGGCAAAATTATAACACG+AGG + Chr8:23413459-23413478 None:intergenic 35.0%
TCATGGTGATCAAATACCAA+AGG - Chr8:23416009-23416028 MsG0880043345.01.T01:CDS 35.0%
TCGAGAGAAAAATTCCATCT+TGG + Chr8:23410545-23410564 None:intergenic 35.0%
TCGGTTCATGCGAAATATTT+CGG - Chr8:23412477-23412496 MsG0880043345.01.T01:CDS 35.0%
TCTATGTCAAAGGTTTGAGA+TGG + Chr8:23415182-23415201 None:intergenic 35.0%
TCTTCAATTCGATCACTTGT+GGG + Chr8:23412323-23412342 None:intergenic 35.0%
TGACTACTCACTTGATGAAT+TGG - Chr8:23410608-23410627 MsG0880043345.01.T01:three_prime_UTR 35.0%
TGCCTGAGTAAAAACATTCA+AGG + Chr8:23410471-23410490 None:intergenic 35.0%
TGGAATGCAGTATGAAGATA+AGG - Chr8:23417079-23417098 MsG0880043345.01.T01:intron 35.0%
TGTTAACGCCTCAGTAAAAA+GGG - Chr8:23410644-23410663 MsG0880043345.01.T01:three_prime_UTR 35.0%
TGTTGCGAAAAAATTCAGCT+TGG + Chr8:23413334-23413353 None:intergenic 35.0%
TTACATAAAGCATGGTTGTC+TGG + Chr8:23417404-23417423 None:intergenic 35.0%
TTATCTGAGCTCAAGTTCAT+CGG - Chr8:23412033-23412052 MsG0880043345.01.T01:CDS 35.0%
TTCACGGTTATTACAAGGAT+GGG - Chr8:23414307-23414326 MsG0880043345.01.T01:intron 35.0%
TTCTTCAATTCGATCACTTG+TGG + Chr8:23412324-23412343 None:intergenic 35.0%
TTGGGATATGAACTTCTTCA+AGG + Chr8:23414519-23414538 None:intergenic 35.0%
TTGGTATTTGATCACCATGA+TGG + Chr8:23416009-23416028 None:intergenic 35.0%
TTTCACGGTTATTACAAGGA+TGG - Chr8:23414306-23414325 MsG0880043345.01.T01:intron 35.0%
TTTGCCTTAATCCTGAAACA+TGG + Chr8:23414741-23414760 None:intergenic 35.0%
TTTGTTCAAGCAGAAAAGAG+CGG - Chr8:23416541-23416560 MsG0880043345.01.T01:CDS 35.0%
! AAAAAGGGTTTTTCTACTGC+AGG - Chr8:23410659-23410678 MsG0880043345.01.T01:three_prime_UTR 35.0%
! AACAATGTTAAAGCACCTTG+GGG - Chr8:23410291-23410310 MsG0880043345.01.T01:three_prime_UTR 35.0%
! AACACCAAAGTTTTCCATCA+TGG - Chr8:23415992-23416011 MsG0880043345.01.T01:CDS 35.0%
! AACTTGGAAGTTTTTACTCG+GGG - Chr8:23415915-23415934 MsG0880043345.01.T01:CDS 35.0%
! ACCACAAGCTTTTTAATGCT+AGG + Chr8:23415131-23415150 None:intergenic 35.0%
! AGGGTTTCGTCTTTGTATTT+TGG - Chr8:23414674-23414693 MsG0880043345.01.T01:CDS 35.0%
! ATCACCATGATGGAAAACTT+TGG + Chr8:23415999-23416018 None:intergenic 35.0%
! ATTGATCAAGCATCGTATCT+AGG - Chr8:23413754-23413773 MsG0880043345.01.T01:intron 35.0%
! CAACAATGTTAAAGCACCTT+GGG - Chr8:23410290-23410309 MsG0880043345.01.T01:three_prime_UTR 35.0%
! CAAGACTCTCTTGTTTAGTA+AGG - Chr8:23413513-23413532 MsG0880043345.01.T01:intron 35.0%
! CTAAACAAGAGAGTCTTGTA+AGG + Chr8:23413511-23413530 None:intergenic 35.0%
! CTATGTCAAAGGTTTGAGAT+GGG + Chr8:23415181-23415200 None:intergenic 35.0%
! GAAGATAAGGGTATAACATC+AGG - Chr8:23417092-23417111 MsG0880043345.01.T01:intron 35.0%
! TTTGAAATCTCAGGATTCCT+TGG + Chr8:23411553-23411572 None:intergenic 35.0%
! TTTTCCTTGCTCAATCATCT+CGG + Chr8:23415009-23415028 None:intergenic 35.0%
!! CACTAATTTTGGGGAATTGA+GGG + Chr8:23411978-23411997 None:intergenic 35.0%
!! GAGTAAAAGTATTTGAGCTC+TGG + Chr8:23411781-23411800 None:intergenic 35.0%
!! GATGGATTGAAGTAGAAACT+TGG + Chr8:23411158-23411177 None:intergenic 35.0%
!! GTTCGAAGATTTTCAAGGAA+AGG + Chr8:23415296-23415315 None:intergenic 35.0%
!! TAAAATCTTTGGTGGTGGAA+GGG - Chr8:23412947-23412966 MsG0880043345.01.T01:intron 35.0%
!! TCACTAATTTTGGGGAATTG+AGG + Chr8:23411979-23411998 None:intergenic 35.0%
!! TGAATATATTTGGGTTGAGG+GGG - Chr8:23416731-23416750 MsG0880043345.01.T01:intron 35.0%
!! TTAAAATCTTTGGTGGTGGA+AGG - Chr8:23412946-23412965 MsG0880043345.01.T01:intron 35.0%
!!! CAGAGTCATTTAGTTTTCAG+TGG - Chr8:23412859-23412878 MsG0880043345.01.T01:CDS 35.0%
!!! GAACAAAAGCGTTGTTTTCA+AGG + Chr8:23416528-23416547 None:intergenic 35.0%
!!! GCATTTTAAGTTTTCTGGCA+AGG + Chr8:23411634-23411653 None:intergenic 35.0%
!!! GTGCAACCTTTTTGAAGTTA+TGG - Chr8:23413223-23413242 MsG0880043345.01.T01:intron 35.0%
AAGTCTTAACCTTCCAAGTC+TGG - Chr8:23413101-23413120 MsG0880043345.01.T01:intron 40.0%
AATCCTGTGCAGCAAAATCT+TGG + Chr8:23414768-23414787 None:intergenic 40.0%
ACAGATGCTGTCAACAAGTA+TGG - Chr8:23411220-23411239 MsG0880043345.01.T01:intron 40.0%
AGATGAAGGTGAAATCGAAG+AGG - Chr8:23415676-23415695 MsG0880043345.01.T01:CDS 40.0%
AGCAATTGCTGAAATATCCC+AGG - Chr8:23414608-23414627 MsG0880043345.01.T01:CDS 40.0%
AGGAAAGGAAGCAAATGAGA+GGG + Chr8:23413000-23413019 None:intergenic 40.0%
ATACAAGAAGCCTGGTATGA+TGG - Chr8:23411272-23411291 MsG0880043345.01.T01:intron 40.0%
ATATGTTTATGCAGGAGGAG+AGG - Chr8:23417257-23417276 MsG0880043345.01.T01:intron 40.0%
ATATTCATAAAAGGGCAGCC+CGG + Chr8:23416918-23416937 None:intergenic 40.0%
ATCACAATCCCAAACAAGCA+AGG + Chr8:23415318-23415337 None:intergenic 40.0%
ATCCTAGTGTACAGTCTTAG+GGG - Chr8:23413606-23413625 MsG0880043345.01.T01:intron 40.0%
ATCTTCGAACCTTGCTTGTT+TGG - Chr8:23415306-23415325 MsG0880043345.01.T01:CDS 40.0%
ATTGTTGGAAAGGAAGACAC+GGG - Chr8:23411695-23411714 MsG0880043345.01.T01:intron 40.0%
CAAACTTCCTGTGGAAATAC+AGG + Chr8:23417324-23417343 None:intergenic 40.0%
CAAGACATTACATGCACTGA+GGG - Chr8:23415442-23415461 MsG0880043345.01.T01:CDS 40.0%
CAATCCTAGTGTACAGTCTT+AGG - Chr8:23413604-23413623 MsG0880043345.01.T01:intron 40.0%
CAGATTAAGTCCATCATACC+AGG + Chr8:23411285-23411304 None:intergenic 40.0%
CAGGCTCTTGTGAAAAAAAC+AGG - Chr8:23416819-23416838 MsG0880043345.01.T01:intron 40.0%
CATGAAAACTCTGCAAAACG+AGG + Chr8:23415061-23415080 None:intergenic 40.0%
CATTGTAAAACGTGCTTCTC+TGG + Chr8:23413276-23413295 None:intergenic 40.0%
CCAATTCTTCAAGCAGTGAT+AGG + Chr8:23415217-23415236 None:intergenic 40.0%
CCAGGAAATTCTTCTACAAC+GGG - Chr8:23412572-23412591 MsG0880043345.01.T01:CDS 40.0%
CCTATCACTGCTTGAAGAAT+TGG - Chr8:23415214-23415233 MsG0880043345.01.T01:intron 40.0%
CGAAATGTCATACACACATG+TGG + Chr8:23417482-23417501 None:intergenic 40.0%
CTCTGATTCAAGTGGACATT+AGG - Chr8:23410512-23410531 MsG0880043345.01.T01:three_prime_UTR 40.0%
CTGTGCGGTTTATAACTGAA+AGG - Chr8:23410948-23410967 MsG0880043345.01.T01:intron 40.0%
CTGTGTATGTACTCTACTAC+TGG - Chr8:23417430-23417449 MsG0880043345.01.T01:CDS 40.0%
CTTCAATTCGATCACTTGTG+GGG + Chr8:23412322-23412341 None:intergenic 40.0%
GAAATCGAAGAGGAAGATGA+AGG - Chr8:23415686-23415705 MsG0880043345.01.T01:CDS 40.0%
GAAGATCAAGATGGAGGTAA+AGG - Chr8:23415740-23415759 MsG0880043345.01.T01:CDS 40.0%
GAAGCCATGTTTCAGGATTA+AGG - Chr8:23414734-23414753 MsG0880043345.01.T01:CDS 40.0%
GAAGGTGAGGATAAAGACAA+AGG - Chr8:23415818-23415837 MsG0880043345.01.T01:CDS 40.0%
GAATACAGAAGCCATGTTTC+AGG - Chr8:23414727-23414746 MsG0880043345.01.T01:CDS 40.0%
GATACAGTGTGGTTAAACTG+GGG + Chr8:23411747-23411766 None:intergenic 40.0%
GATGAAGGTGAAGATCAAGA+TGG - Chr8:23415731-23415750 MsG0880043345.01.T01:CDS 40.0%
GATTTGAAGGTGACAATCGA+TGG - Chr8:23416031-23416050 MsG0880043345.01.T01:CDS 40.0%
GCAAAAATTCGCTCAAGGAT+CGG - Chr8:23412458-23412477 MsG0880043345.01.T01:CDS 40.0%
GCCTTAAGATCCGAGAAAAA+GGG + Chr8:23411901-23411920 None:intergenic 40.0%
GCCTTAGAATGGAAGACAAA+CGG + Chr8:23415101-23415120 None:intergenic 40.0%
GTACAATACCCCAAAATGGT+GGG - Chr8:23416852-23416871 MsG0880043345.01.T01:intron 40.0%
GTTCATGCGAAATATTTCGG+AGG - Chr8:23412480-23412499 MsG0880043345.01.T01:CDS 40.0%
GTTGTTGTCATGTGACTGAA+AGG - Chr8:23416774-23416793 MsG0880043345.01.T01:intron 40.0%
GTTTGGAAGAAGAATTGCCA+AGG - Chr8:23411533-23411552 MsG0880043345.01.T01:intron 40.0%
TAAAGAGGAAGATGAAGGTG+AGG - Chr8:23415805-23415824 MsG0880043345.01.T01:CDS 40.0%
TAGAGACAGAATAGGTTAGG+TGG + Chr8:23411086-23411105 None:intergenic 40.0%
TAGGAAAGGAAGCAAATGAG+AGG + Chr8:23413001-23413020 None:intergenic 40.0%
TAGGTAGTAGAGCCTTAGAA+TGG + Chr8:23415112-23415131 None:intergenic 40.0%
TATACAAAGACTGGACCTGA+AGG - Chr8:23413078-23413097 MsG0880043345.01.T01:intron 40.0%
TATCTGAGCTCAAGTTCATC+GGG - Chr8:23412034-23412053 MsG0880043345.01.T01:CDS 40.0%
TCCGTTTGTCTTCCATTCTA+AGG - Chr8:23415097-23415116 MsG0880043345.01.T01:intron 40.0%
TCGAATTGAAGAAGCTATGC+TGG - Chr8:23412331-23412350 MsG0880043345.01.T01:CDS 40.0%
TCTTCGAACCTTGCTTGTTT+GGG - Chr8:23415307-23415326 MsG0880043345.01.T01:CDS 40.0%
TGCCTTAAGATCCGAGAAAA+AGG + Chr8:23411902-23411921 None:intergenic 40.0%
TTAAGATCCGAGAAAAAGGG+TGG + Chr8:23411898-23411917 None:intergenic 40.0%
TTAGAGAAAGACACAGTGGA+CGG + Chr8:23415359-23415378 None:intergenic 40.0%
TTATATCGCCAAAGTAGACC+AGG - Chr8:23412554-23412573 MsG0880043345.01.T01:CDS 40.0%
TTGTCACGATACAAATCAGC+AGG + Chr8:23416116-23416135 None:intergenic 40.0%
TTTGAATCCAAGGTTACTCC+CGG - Chr8:23414951-23414970 MsG0880043345.01.T01:CDS 40.0%
! AAAGCTTTTCCAGACTTGGA+AGG + Chr8:23413113-23413132 None:intergenic 40.0%
! AAGAGAGTCTTGTAAGGTGA+GGG + Chr8:23413505-23413524 None:intergenic 40.0%
! AAGTCTGGAAAAGCTTTGTG+TGG - Chr8:23413116-23413135 MsG0880043345.01.T01:intron 40.0%
! ACACAAAGCTTTTCCAGACT+TGG + Chr8:23413117-23413136 None:intergenic 40.0%
! ACCCTTTTTCTCGGATCTTA+AGG - Chr8:23411897-23411916 MsG0880043345.01.T01:CDS 40.0%
! CAATAGACCACCCTTTTTCT+CGG - Chr8:23411888-23411907 MsG0880043345.01.T01:CDS 40.0%
! CTAATCCAATGGATTCAAGC+CGG + Chr8:23415256-23415275 None:intergenic 40.0%
! GAGCGAATTTTTGCATGTTG+AGG + Chr8:23412452-23412471 None:intergenic 40.0%
! GCAACAATGTTAAAGCACCT+TGG - Chr8:23410289-23410308 MsG0880043345.01.T01:three_prime_UTR 40.0%
! GCAAGGTTCGAAGATTTTCA+AGG + Chr8:23415301-23415320 None:intergenic 40.0%
! GTTACCGTCTTTGAAGAAAG+TGG - Chr8:23412413-23412432 MsG0880043345.01.T01:CDS 40.0%
! TAATCCAATGGATTCAAGCC+GGG + Chr8:23415255-23415274 None:intergenic 40.0%
! TTCTTCATTTTCTTCTCCGG+TGG + Chr8:23413187-23413206 None:intergenic 40.0%
! TTGCTTGTTTGGGATTGTGA+TGG - Chr8:23415317-23415336 MsG0880043345.01.T01:CDS 40.0%
! TTTCCAAGATTTTGCTGCAC+AGG - Chr8:23414762-23414781 MsG0880043345.01.T01:CDS 40.0%
! TTTCGGGCTATGACATTTTG+CGG - Chr8:23412391-23412410 MsG0880043345.01.T01:CDS 40.0%
!! AAACTTTGGTGTTGTCGCAT+TGG + Chr8:23415985-23416004 None:intergenic 40.0%
!! AACTTTGGTGTTGTCGCATT+GGG + Chr8:23415984-23416003 None:intergenic 40.0%
!! AATTTTGGGGAATTGAGGGA+GGG + Chr8:23411974-23411993 None:intergenic 40.0%
!! TAATTTTGGGGAATTGAGGG+AGG + Chr8:23411975-23411994 None:intergenic 40.0%
!! TGTTTTCAAGGCTAGGATGA+TGG + Chr8:23416516-23416535 None:intergenic 40.0%
!!! AAAGCGTTGTTTTCAAGGCT+AGG + Chr8:23416523-23416542 None:intergenic 40.0%
AACCCCTAAGACTGTACACT+AGG + Chr8:23413611-23413630 None:intergenic 45.0%
AAGGCAGTAGTGGCTAAAGA+GGG - Chr8:23415494-23415513 MsG0880043345.01.T01:CDS 45.0%
ACCAGGCTTCTTGTATCTCA+CGG + Chr8:23411268-23411287 None:intergenic 45.0%
AGGTGAAGGTGAAATCGAAG+AGG - Chr8:23415706-23415725 MsG0880043345.01.T01:CDS 45.0%
ATAGGTTAGGTGGTCAGTTG+AGG + Chr8:23411076-23411095 None:intergenic 45.0%
ATGTAATGTCTTGGCGGTTG+AGG + Chr8:23415435-23415454 None:intergenic 45.0%
ATGTCCACTTGAATCAGAGC+TGG + Chr8:23410511-23410530 None:intergenic 45.0%
CAAGCAGAAAAGAGCGGAAA+AGG - Chr8:23416547-23416566 MsG0880043345.01.T01:CDS 45.0%
CAGGTTAGAGAAAGACACAG+TGG + Chr8:23415363-23415382 None:intergenic 45.0%
CAGTGCATGTAATGTCTTGG+CGG + Chr8:23415441-23415460 None:intergenic 45.0%
CAGTTTGACGTCTCTGATTC+TGG - Chr8:23411322-23411341 MsG0880043345.01.T01:intron 45.0%
CCAAGACATTACATGCACTG+AGG - Chr8:23415441-23415460 MsG0880043345.01.T01:CDS 45.0%
CCAGGAGTGATCTAATCCAA+TGG + Chr8:23415267-23415286 None:intergenic 45.0%
CCCGTTGTAGAAGAATTTCC+TGG + Chr8:23412575-23412594 None:intergenic 45.0%
CCTCAGTGCATGTAATGTCT+TGG + Chr8:23415444-23415463 None:intergenic 45.0%
CGCTATGAAGATGAAGACGA+AGG - Chr8:23415629-23415648 MsG0880043345.01.T01:CDS 45.0%
CGTACAATACCCCAAAATGG+TGG - Chr8:23416851-23416870 MsG0880043345.01.T01:intron 45.0%
CTGCGTACAATACCCCAAAA+TGG - Chr8:23416848-23416867 MsG0880043345.01.T01:intron 45.0%
GAAGAGGAAGATGAAGGTGA+AGG - Chr8:23415692-23415711 MsG0880043345.01.T01:CDS 45.0%
GAAGGTGAAGATCAAGATGG+AGG - Chr8:23415734-23415753 MsG0880043345.01.T01:CDS 45.0%
GATATGGTTCAAGTCAGCGA+TGG - Chr8:23412900-23412919 MsG0880043345.01.T01:intron 45.0%
GATGGAGATGAAGAGACAGA+TGG - Chr8:23415548-23415567 MsG0880043345.01.T01:CDS 45.0%
GGAAGGTTAAGACTTCCTTC+AGG + Chr8:23413096-23413115 None:intergenic 45.0%
GGCACCCAATTTACGAGAAA+TGG - Chr8:23411918-23411937 MsG0880043345.01.T01:CDS 45.0%
GTAGTAGAGAAGGAGCAAGA+AGG - Chr8:23410382-23410401 MsG0880043345.01.T01:three_prime_UTR 45.0%
GTCATGTGACTGAAAGGTCA+CGG - Chr8:23416780-23416799 MsG0880043345.01.T01:intron 45.0%
TACATTCACCCTCATCCTCA+GGG + Chr8:23411858-23411877 None:intergenic 45.0%
TACCTGAGCTGACATCTGTT+TGG - Chr8:23411516-23411535 MsG0880043345.01.T01:intron 45.0%
TCAAGGTTGAGTAAGACTCG+TGG - Chr8:23417059-23417078 MsG0880043345.01.T01:intron 45.0%
TCATGCAACAGTTTGAGGAG+AGG - Chr8:23416086-23416105 MsG0880043345.01.T01:CDS 45.0%
TCATGTGACTGAAAGGTCAC+GGG - Chr8:23416781-23416800 MsG0880043345.01.T01:intron 45.0%
TGCAGCAATGTCGTCAAATC+AGG + Chr8:23412126-23412145 None:intergenic 45.0%
TGCGATCATGCAACAGTTTG+AGG - Chr8:23416081-23416100 MsG0880043345.01.T01:CDS 45.0%
TTCCAAACAGATGTCAGCTC+AGG + Chr8:23411521-23411540 None:intergenic 45.0%
! AGAGAGTCTTGTAAGGTGAG+GGG + Chr8:23413504-23413523 None:intergenic 45.0%
! AGGGTTTTTCTACTGCAGGT+AGG - Chr8:23410663-23410682 MsG0880043345.01.T01:three_prime_UTR 45.0%
! ATCTGCTAATGGTCGGTGTT+AGG - Chr8:23411573-23411592 MsG0880043345.01.T01:intron 45.0%
! CAAGAGAGTCTTGTAAGGTG+AGG + Chr8:23413506-23413525 None:intergenic 45.0%
! CCATTGGATTAGATCACTCC+TGG - Chr8:23415264-23415283 MsG0880043345.01.T01:intron 45.0%
! CTGAGGCGTTAACATCATTG+TGG + Chr8:23410638-23410657 None:intergenic 45.0%
! GTTACCAGCTCTGATTCAAG+TGG - Chr8:23410504-23410523 MsG0880043345.01.T01:three_prime_UTR 45.0%
!! AAGTGAAAGTGCTTCCAAGC+CGG + Chr8:23414973-23414992 None:intergenic 45.0%
!! GGAAGCACTTTCACTTGGTA+AGG - Chr8:23414977-23414996 MsG0880043345.01.T01:CDS 45.0%
!!! AAAGTAAATTTTATATTTAT+GGG + Chr8:23414289-23414308 None:intergenic 5.0%
ACAACTTTACCGTTGCGCCA+AGG + Chr8:23416759-23416778 None:intergenic 50.0%
ACATGTGTTTGGATGCCCTG+AGG - Chr8:23411840-23411859 MsG0880043345.01.T01:CDS 50.0%
ACCGTGAGATACAAGAAGCC+TGG - Chr8:23411264-23411283 MsG0880043345.01.T01:intron 50.0%
CACAGTTCACACGAGTGTCA+GGG - Chr8:23413360-23413379 MsG0880043345.01.T01:intron 50.0%
CATTAGGCAGTGTCCCAAGA+TGG - Chr8:23410528-23410547 MsG0880043345.01.T01:three_prime_UTR 50.0%
CCTTGATTACGATCTCCCCA+AGG + Chr8:23410309-23410328 None:intergenic 50.0%
CCTTGGGGAGATCGTAATCA+AGG - Chr8:23410306-23410325 MsG0880043345.01.T01:three_prime_UTR 50.0%
CTACATTCACCCTCATCCTC+AGG + Chr8:23411859-23411878 None:intergenic 50.0%
GAAGCCGAGATGATTGAGCA+AGG - Chr8:23415002-23415021 MsG0880043345.01.T01:intron 50.0%
GAAGGCAGTAGTGGCTAAAG+AGG - Chr8:23415493-23415512 MsG0880043345.01.T01:CDS 50.0%
GACGAAGGTGAACGTGAAGA+TGG - Chr8:23415644-23415663 MsG0880043345.01.T01:CDS 50.0%
TCACAGTTCACACGAGTGTC+AGG - Chr8:23413359-23413378 MsG0880043345.01.T01:intron 50.0%
TCGGGTCAGAGGATTCTTCA+TGG - Chr8:23412052-23412071 MsG0880043345.01.T01:CDS 50.0%
TTCAAGGAAAGGGCTCATCC+AGG + Chr8:23415285-23415304 None:intergenic 50.0%
TTTGGATGCCCTGAGGATGA+GGG - Chr8:23411847-23411866 MsG0880043345.01.T01:CDS 50.0%
!! AGTGAAAGTGCTTCCAAGCC+GGG + Chr8:23414972-23414991 None:intergenic 50.0%
!! GGCTTGGAAGCACTTTCACT+TGG - Chr8:23414972-23414991 MsG0880043345.01.T01:CDS 50.0%
ACTAAAGCTCCCGCATACGC+AGG + Chr8:23416892-23416911 None:intergenic 55.0%
ATCCAAGGTTACTCCCGGCT+TGG - Chr8:23414956-23414975 MsG0880043345.01.T01:CDS 55.0%
CTAAAGCTCCCGCATACGCA+GGG + Chr8:23416891-23416910 None:intergenic 55.0%
GCAAAGGACGAAACAGCCAC+CGG - Chr8:23413168-23413187 MsG0880043345.01.T01:intron 55.0%
GCTCAAGTTCATCGGGTCAG+AGG - Chr8:23412041-23412060 MsG0880043345.01.T01:CDS 55.0%
GTTTGGATGCCCTGAGGATG+AGG - Chr8:23411846-23411865 MsG0880043345.01.T01:CDS 55.0%
TGGAGCTTCGTAGTCTGTCC+CGG - Chr8:23415234-23415253 MsG0880043345.01.T01:intron 55.0%
TTCCAAGCCGGGAGTAACCT+TGG + Chr8:23414961-23414980 None:intergenic 55.0%
! AAAATGGTGGGACCCCTTCG+TGG - Chr8:23416864-23416883 MsG0880043345.01.T01:intron 55.0%
! AAGGTCACGGGTTCGAGTTC+TGG - Chr8:23416793-23416812 MsG0880043345.01.T01:intron 55.0%
! ACGAAGGGGTCCCACCATTT+TGG + Chr8:23416865-23416884 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - Chr8:23416896-23416915 MsG0880043345.01.T01:intron 55.0%
! CGAAGGGGTCCCACCATTTT+GGG + Chr8:23416864-23416883 None:intergenic 55.0%
! CTGTCCCGGCTTGAATCCAT+TGG - Chr8:23415248-23415267 MsG0880043345.01.T01:intron 55.0%
! GAAGGGGTCCCACCATTTTG+GGG + Chr8:23416863-23416882 None:intergenic 55.0%
!! AGTTTTCTGGCAAGGGCTGC+AGG + Chr8:23411626-23411645 None:intergenic 55.0%
!! CGGGTTCGAGTTCTGGAAAC+AGG - Chr8:23416800-23416819 MsG0880043345.01.T01:intron 55.0%
!! GGGCTGCAGGAAAGAGTGTT+CGG + Chr8:23411613-23411632 None:intergenic 55.0%
CATACGCAGGGTCCACGAAG+GGG + Chr8:23416879-23416898 None:intergenic 60.0%
CTTCGTGGACCCTGCGTATG+CGG - Chr8:23416879-23416898 MsG0880043345.01.T01:intron 60.0%
GCATACGCAGGGTCCACGAA+GGG + Chr8:23416880-23416899 None:intergenic 60.0%
TTCGTGGACCCTGCGTATGC+GGG - Chr8:23416880-23416899 MsG0880043345.01.T01:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - Chr8:23416897-23416916 MsG0880043345.01.T01:intron 60.0%
!! TTTGGGTTGAGGGGGAGCCT+TGG - Chr8:23416739-23416758 MsG0880043345.01.T01:intron 60.0%
CGCATACGCAGGGTCCACGA+AGG + Chr8:23416881-23416900 None:intergenic 65.0%
GAGGGGGAGCCTTGGCGCAA+CGG - Chr8:23416747-23416766 MsG0880043345.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 23410286 23417575 23410286 ID=MsG0880043345.01;Name=MsG0880043345.01
Chr8 mRNA 23410286 23417575 23410286 ID=MsG0880043345.01.T01;Parent=MsG0880043345.01;Name=MsG0880043345.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0.6|0.5|1|0.8|0.66|6|548|1077
Chr8 exon 23410286 23410805 23410286 ID=MsG0880043345.01.T01:exon:8585;Parent=MsG0880043345.01.T01
Chr8 exon 23411713 23412898 23411713 ID=MsG0880043345.01.T01:exon:8584;Parent=MsG0880043345.01.T01
Chr8 exon 23414436 23414999 23414436 ID=MsG0880043345.01.T01:exon:8583;Parent=MsG0880043345.01.T01
Chr8 exon 23415268 23416178 23415268 ID=MsG0880043345.01.T01:exon:8582;Parent=MsG0880043345.01.T01
Chr8 exon 23416274 23416637 23416274 ID=MsG0880043345.01.T01:exon:8581;Parent=MsG0880043345.01.T01
Chr8 exon 23417339 23417575 23417339 ID=MsG0880043345.01.T01:exon:8580;Parent=MsG0880043345.01.T01
Chr8 CDS 23417339 23417575 23417339 ID=MsG0880043345.01.T01:cds;Parent=MsG0880043345.01.T01
Chr8 CDS 23416274 23416637 23416274 ID=MsG0880043345.01.T01:cds;Parent=MsG0880043345.01.T01
Chr8 CDS 23415268 23416178 23415268 ID=MsG0880043345.01.T01:cds;Parent=MsG0880043345.01.T01
Chr8 CDS 23414436 23414999 23414436 ID=MsG0880043345.01.T01:cds;Parent=MsG0880043345.01.T01
Chr8 CDS 23411741 23412898 23411741 ID=MsG0880043345.01.T01:cds;Parent=MsG0880043345.01.T01
Chr8 three_prime_UTR 23411713 23411740 23411713 ID=MsG0880043345.01.T01:three_prime_utr;Parent=MsG0880043345.01.T01
Chr8 three_prime_UTR 23410286 23410805 23410286 ID=MsG0880043345.01.T01:three_prime_utr;Parent=MsG0880043345.01.T01
Gene Sequence

>MsG0880043345.01.T01

ATGGCAACAATGTTAAAGCACCTTGGGGAGATCGTAATCAAGGACTGTCGATCAATTAGAAAAATAGTAGAGGAGCAAGAAGGAACAACTACACAAGTAGTAGAGAAGGAGCAAGAAGGAACAACTTCAAAAGAGATCAAATTTGAGTGGCTATACTTGATACATCTAGATTCTTTATCAAACCTTGAATGTTTTTACTCAGGCAATGATACTTTGCAGTTACCAGCTCTGATTCAAATGCTGTCAACAAGTATGGACAAGAAGAGTTTTTCAAAACACCGTGAGATACAAGAAGCCTGGTATGATGGACTTAATCTGCAAAACAATTTGTTTTGCAGTTTGACGTCTCTGATTCTGGACAACTGTGATTTTGAAGAATATGCAATTCCATCTAATATTCTTCGTTGTTTAAAAAACTTGAATCAACTGGTAGTAAAGAATTGCAACAAAATAAAAGTAATTTTTGATATGAATGACAATGATACTATTGAAACAACATCCCAATTGAAGCTTTTGTTTTTAGAAGGGCTACCTGAGCTGACATCTGTTTGGAAGAAGAATTGCCAAGGAATCCTGAGATTTCAAAATCTGCTAATGGTCGGAATTTCAACAAATTGTTGGAAAGGAAGACACGGGAACAGATGTAATGAAAAGCTTGTGTTCCCCAGTTTAACCACACTGTATCTTTTAAAGTTACCAGAGCTCAAATACTTTTACTCTGAATTATTCATTGTGGAGTGCCCCAAGTTAAATGATTTACATGTGTTTGGATGCCCTGAGGATGAGGGTGAATGTAGTACGTACATCAATAGACCACCCTTTTTCTCGGATCTTAAGGCACCCAATTTACGAGAAATGGAAATAGGAAGGTGCAGTAGTCTTGATATGTCCCTCCCTCAATTCCCCAAAATTAGTGAAATACAACATTTAGAAATTTTGACAATGAACAAATTATCTGAGCTCAAGTTCATCGGGTCAGAGGATTCTTCATGGTTGAACAATGTCTGTGAGAAACTCTGTGAGCTGAATGTTCATGCTTGTCCTGATTTGACGACATTGCTGCATTCTACATCCCCAATATCTTTCTCCAATCTAAAAGAATTGTACATAAGTGAATGTCCAAAATTGAATTATTTATTCACTTCCTCAGCAACAAAAAACTTAATGCACCTTGAGAAGATCATAGTTGTGAATTGTAGTTCAATGGAAAAAGTAATGGCAAAAGATAAGAATGAAGCCCCACAAGTGATCGAATTGAAGAAGCTATGCTGGATACTTCTAAAATCTTTATCAAGTCTGGAATGTTTTTTTTCGGGCTATGACATTTTGCGGTTACCGTCTTTGAAGAAAGTGGAAATATCGGATTGCCTCAACATGCAAAAATTCGCTCAAGGATCGGTTCATGCGAAATATTTCGGAGGAAGTCAAGTTTCCTCCTGTTCAAATGATGATTTAGTGTTGAATAATCAAGATTATATCGCCAAAGTAGACCAGGAAATTCTTCTACAACGGAGTCATTTAGTTTTCAGTGGCTCTCCTTTGTTGAAAGAGATATGGTTCAAGTCAGCGATGGTTCCCGACAGATGTTTTTGCAATTTAAAATCTTTGGTGGTGGAAGGGTGTGAATTTTTATCTGATGTGATACTACCCTCTCATTTGCTTCCTTTCCTAATCAACTTGAAATCATTGGAAGTGCGAAAATGTAATTCTGTTGAGGCAATATTTGTTTATACAAAGACTGGACCTGAAGGAAGTCTTAACCTTCCAAGTCTGGAAAAGCTTTGTGTGGAAAACTGTGAAAATTTAGTGGAAATTGTTGCAAAGGACGAAACAGCCACCGGAGAAGAAAATGAAGAAATTATTATGTTCCCAAGTGCAACCTTTTTGAAGTTATGGAATTTATACAATCTGAGTTGCATATATCCAGAGAAGCACGTTTTACAATGCAGTGAGTTAACAGAATTACATGTCGTGCATTGTCCCAAGCTGAATTTTTTCGCAACAGAATTTCACAGTTCACACGAGTGTCAGGGTAATTCTCTTACAAATCAGCAAGCATTTGTCTCACTTGAAAAGGTTACTCCCGGCTTGGAAGCACTTTCACTTGGTAAGGAAGAAGCCGAGATGATTGAGCAAGGAAAACTTCATGTTGATTTCCAAGAATTGAATTCCCTCGTTTTGCAGAGTTTTCATGATGAATCAGTTGAATATCCGTTTGTCTTCCATTCTAAGGCTCTACTACCTAGCATTAAAAAGCTTGTGGTGTGTGATAGTGACTTCAAAGAGATATTCCCATCTCAAACCTTTGACATAGATTGTACAAAAATCCTATCACTGCTTGAAGAATTGGAGCTTCGTAGTCTGTCCCGGCTTGAATCCATTGGATTAGATCACTCCTGGATGAGCCCTTTCCTTGAAAATCTTCGAACCTTGCTTGTTTGGGATTGTGATGGTTTGAAAAACTTAACACCGTCCACTGTGTCTTTCTCTAACCTGATAAAGCTTGATATAAGGAACTGTTGTGAATTCAAATACTTGTTTACATCCTCAACCGCCAAGACATTACATGCACTGAGGGAGTTGCACATAGCCAACTGTAAATTATTGAAGGCAGTAGTGGCTAAAGAGGGAGATGAATATAAATATGAAGATGAAAGTCAAGATGGAGATGAAGAGACAGATGGATATAGATATGAAAATGAGGCTGAAGATGTAGTTAAAGTTGAAGGTGAAGGTGAAAGACGCTATGAAGATGAAGACGAAGGTGAACGTGAAGATGGAAAAGATAAAGATGAAGGTGAAATCGAAGAGGAAGATGAAGGTGAAGGTGAAATCGAAGAGGAAGATGAAGGTGAAGATCAAGATGGAGGTAAAGGTGAAGATGAAATGAAAGAGGATGATGAAGGTGAAAGTGAAATTAAAGAGGAAGATGAAGGTGAGGATAAAGACAAAGGTAAAGGTGAAATCAAAGATGAAGATAATATGATATTCATGAAACTTGAGATTTTGGACTTTAGCTTGTTACCAAAACTTGGAAGTTTTTACTCGGGGAGTTCCACTTTGAAGTTTCCATGTTTGAAACAAGTGTCGTTCACCCAATGCGACAACACCAAAGTTTTCCATCATGGTGATCAAATACCAAAGGATTTGAAGGTGACAATCGATGGAGACTGCACAAAATATGATATAAACTCTGCGATCATGCAACAGTTTGAGGAGAGGCAGACCTGCTGA

Protein sequence

>MsG0880043345.01.T01

MATMLKHLGEIVIKDCRSIRKIVEEQEGTTTQVVEKEQEGTTSKEIKFEWLYLIHLDSLSNLECFYSGNDTLQLPALIQMLSTSMDKKSFSKHREIQEAWYDGLNLQNNLFCSLTSLILDNCDFEEYAIPSNILRCLKNLNQLVVKNCNKIKVIFDMNDNDTIETTSQLKLLFLEGLPELTSVWKKNCQGILRFQNLLMVGISTNCWKGRHGNRCNEKLVFPSLTTLYLLKLPELKYFYSELFIVECPKLNDLHVFGCPEDEGECSTYINRPPFFSDLKAPNLREMEIGRCSSLDMSLPQFPKISEIQHLEILTMNKLSELKFIGSEDSSWLNNVCEKLCELNVHACPDLTTLLHSTSPISFSNLKELYISECPKLNYLFTSSATKNLMHLEKIIVVNCSSMEKVMAKDKNEAPQVIELKKLCWILLKSLSSLECFFSGYDILRLPSLKKVEISDCLNMQKFAQGSVHAKYFGGSQVSSCSNDDLVLNNQDYIAKVDQEILLQRSHLVFSGSPLLKEIWFKSAMVPDRCFCNLKSLVVEGCEFLSDVILPSHLLPFLINLKSLEVRKCNSVEAIFVYTKTGPEGSLNLPSLEKLCVENCENLVEIVAKDETATGEENEEIIMFPSATFLKLWNLYNLSCIYPEKHVLQCSELTELHVVHCPKLNFFATEFHSSHECQGNSLTNQQAFVSLEKVTPGLEALSLGKEEAEMIEQGKLHVDFQELNSLVLQSFHDESVEYPFVFHSKALLPSIKKLVVCDSDFKEIFPSQTFDIDCTKILSLLEELELRSLSRLESIGLDHSWMSPFLENLRTLLVWDCDGLKNLTPSTVSFSNLIKLDIRNCCEFKYLFTSSTAKTLHALRELHIANCKLLKAVVAKEGDEYKYEDESQDGDEETDGYRYENEAEDVVKVEGEGERRYEDEDEGEREDGKDKDEGEIEEEDEGEGEIEEEDEGEDQDGGKGEDEMKEDDEGESEIKEEDEGEDKDKGKGEIKDEDNMIFMKLEILDFSLLPKLGSFYSGSSTLKFPCLKQVSFTQCDNTKVFHHGDQIPKDLKVTIDGDCTKYDINSAIMQQFEERQTC*