Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043905.01.T01 | XP_003628123.1 | 92.568 | 296 | 13 | 1 | 1 | 296 | 1 | 287 | 0 | 533 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043905.01.T01 | Q9LES3 | 54.48 | 279 | 100 | 8 | 23 | 296 | 15 | 271 | 9.64E-77 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043905.01.T01 | G7L6Z1 | 92.568 | 296 | 13 | 1 | 1 | 296 | 1 | 287 | 0.0 | 533 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0880043905.01.T01 | TF | bZIP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048073.01 | MsG0880043905.01 | 0.832291 | 1.027868e-55 | 1.143720e-52 |
| MsG0080048761.01 | MsG0880043905.01 | -0.815000 | 1.156413e-51 | 7.878247e-49 |
| MsG0080048817.01 | MsG0880043905.01 | 0.822304 | 2.544456e-53 | 2.121649e-50 |
| MsG0180000152.01 | MsG0880043905.01 | 0.826767 | 2.264535e-54 | 2.143689e-51 |
| MsG0180000544.01 | MsG0880043905.01 | -0.813709 | 2.231524e-51 | 1.468069e-48 |
| MsG0180002482.01 | MsG0880043905.01 | 0.837002 | 6.718662e-57 | 8.612231e-54 |
| MsG0180003697.01 | MsG0880043905.01 | 0.807157 | 5.797111e-50 | 3.205387e-47 |
| MsG0180003952.01 | MsG0880043905.01 | 0.805657 | 1.200721e-49 | 6.388413e-47 |
| MsG0180004997.01 | MsG0880043905.01 | 0.809348 | 1.978520e-50 | 1.158904e-47 |
| MsG0180005052.01 | MsG0880043905.01 | 0.808636 | 2.809239e-50 | 1.614508e-47 |
| MsG0180005686.01 | MsG0880043905.01 | 0.807521 | 4.853669e-50 | 2.709308e-47 |
| MsG0180005927.01 | MsG0880043905.01 | 0.839437 | 1.585203e-57 | 2.189178e-54 |
| MsG0180006144.01 | MsG0880043905.01 | 0.827478 | 1.529843e-54 | 1.478713e-51 |
| MsG0180006220.01 | MsG0880043905.01 | 0.826608 | 2.471684e-54 | 2.329085e-51 |
| MsG0780040566.01 | MsG0880043905.01 | -0.808801 | 2.590654e-50 | 1.495340e-47 |
| MsG0780040596.01 | MsG0880043905.01 | 0.822348 | 2.485932e-53 | 2.075482e-50 |
| MsG0780040858.01 | MsG0880043905.01 | 0.816208 | 6.224533e-52 | 4.383161e-49 |
| MsG0780040867.01 | MsG0880043905.01 | 0.800676 | 1.288575e-48 | 6.036413e-46 |
| MsG0780041117.01 | MsG0880043905.01 | -0.809979 | 1.447411e-50 | 8.620842e-48 |
| MsG0880043905.01 | MsG0880044394.01 | 0.806026 | 1.004363e-49 | 5.394565e-47 |
| MsG0880043905.01 | MsG0880044416.01 | 0.804024 | 2.634771e-49 | 1.344152e-46 |
| MsG0880043905.01 | MsG0880045555.01 | -0.812139 | 4.926970e-51 | 3.107531e-48 |
| MsG0880043905.01 | MsG0880045896.01 | 0.804367 | 2.235142e-49 | 1.150348e-46 |
| MsG0880043905.01 | MsG0880046126.01 | 0.827462 | 1.543787e-54 | 1.491515e-51 |
| MsG0880043905.01 | MsG0880046458.01 | 0.803520 | 3.351392e-49 | 1.687783e-46 |
| MsG0880043905.01 | MsG0880046536.01 | 0.826696 | 2.353991e-54 | 2.223919e-51 |
| MsG0880043905.01 | MsG0880046930.01 | 0.819943 | 8.905817e-53 | 6.950602e-50 |
| MsG0280011059.01 | MsG0880043905.01 | -0.827320 | 1.669345e-54 | 1.606241e-51 |
| MsG0380011898.01 | MsG0880043905.01 | 0.801551 | 8.538012e-49 | 4.088950e-46 |
| MsG0380013467.01 | MsG0880043905.01 | 0.802622 | 5.139761e-49 | 2.529570e-46 |
| MsG0380014277.01 | MsG0880043905.01 | 0.806890 | 6.604066e-50 | 3.626314e-47 |
| MsG0680032204.01 | MsG0880043905.01 | 0.808931 | 2.430003e-50 | 1.407445e-47 |
| MsG0480019126.01 | MsG0880043905.01 | 0.849518 | 3.070918e-60 | 5.836504e-57 |
| MsG0480020874.01 | MsG0880043905.01 | 0.810243 | 1.269833e-50 | 7.615194e-48 |
| MsG0480021194.01 | MsG0880043905.01 | 0.830396 | 3.007649e-55 | 3.164878e-52 |
| MsG0480021201.01 | MsG0880043905.01 | 0.839018 | 2.036722e-57 | 2.776519e-54 |
| MsG0480021776.01 | MsG0880043905.01 | -0.819900 | 9.109625e-53 | 7.101160e-50 |
| MsG0480022222.01 | MsG0880043905.01 | 0.828808 | 7.319017e-55 | 7.353017e-52 |
| MsG0480022340.01 | MsG0880043905.01 | -0.850214 | 1.962229e-60 | 3.815747e-57 |
| MsG0480022795.01 | MsG0880043905.01 | 0.800502 | 1.398546e-48 | 6.522511e-46 |
| MsG0580024495.01 | MsG0880043905.01 | 0.809413 | 1.916124e-50 | 1.124307e-47 |
| MsG0580025467.01 | MsG0880043905.01 | 0.835608 | 1.519437e-56 | 1.867500e-53 |
| MsG0380015466.01 | MsG0880043905.01 | 0.805531 | 1.276451e-49 | 6.769021e-47 |
| MsG0380015703.01 | MsG0880043905.01 | 0.800280 | 1.551754e-48 | 7.196676e-46 |
| MsG0380016004.01 | MsG0880043905.01 | 0.810769 | 9.777699e-51 | 5.946241e-48 |
| MsG0380016191.01 | MsG0880043905.01 | -0.817154 | 3.821204e-52 | 2.761245e-49 |
| MsG0380016547.01 | MsG0880043905.01 | -0.832090 | 1.152476e-55 | 1.274932e-52 |
| MsG0380016886.01 | MsG0880043905.01 | 0.816716 | 4.790073e-52 | 3.420153e-49 |
| MsG0480018214.01 | MsG0880043905.01 | 0.800583 | 1.346225e-48 | 6.291599e-46 |
| MsG0580027064.01 | MsG0880043905.01 | -0.811159 | 8.046238e-51 | 4.944056e-48 |
| MsG0580028901.01 | MsG0880043905.01 | 0.831173 | 1.939492e-55 | 2.088146e-52 |
| MsG0580029924.01 | MsG0880043905.01 | 0.817325 | 3.496476e-52 | 2.538408e-49 |
| MsG0580029925.01 | MsG0880043905.01 | 0.808237 | 3.417747e-50 | 1.943967e-47 |
| MsG0280007058.01 | MsG0880043905.01 | -0.811476 | 6.868204e-51 | 4.255857e-48 |
| MsG0280007193.01 | MsG0880043905.01 | -0.801640 | 8.185006e-49 | 3.928754e-46 |
| MsG0280007763.01 | MsG0880043905.01 | 0.800749 | 1.245406e-48 | 5.844797e-46 |
| MsG0680035659.01 | MsG0880043905.01 | 0.807918 | 3.997702e-50 | 2.254566e-47 |
| MsG0680035704.01 | MsG0880043905.01 | 0.811725 | 6.063637e-51 | 3.782071e-48 |
| MsG0780036705.01 | MsG0880043905.01 | 0.827120 | 1.864640e-54 | 1.783453e-51 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0380011796.01 | MsG0880043905.01 | PPI |
| MsG0380011934.01 | MsG0880043905.01 | PPI |
| MsG0880043905.01 | MsG0380011934.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043905.01.T01 | MTR_8g043960 | 92.568 | 296 | 13 | 1 | 1 | 296 | 1 | 287 | 0.0 | 533 |
| MsG0880043905.01.T01 | MTR_3g010660 | 64.983 | 297 | 97 | 4 | 6 | 296 | 1 | 296 | 1.04e-132 | 379 |
| MsG0880043905.01.T01 | MTR_7g088090 | 47.386 | 306 | 130 | 8 | 6 | 294 | 1 | 292 | 1.91e-74 | 231 |
| MsG0880043905.01.T01 | MTR_6g026800 | 50.000 | 304 | 126 | 7 | 6 | 294 | 1 | 293 | 2.78e-72 | 226 |
| MsG0880043905.01.T01 | MTR_4g085910 | 34.985 | 343 | 141 | 11 | 23 | 296 | 17 | 346 | 8.46e-47 | 161 |
| MsG0880043905.01.T01 | MTR_7g104480 | 35.260 | 346 | 141 | 11 | 30 | 294 | 45 | 388 | 3.41e-36 | 134 |
| MsG0880043905.01.T01 | MTR_5g088230 | 55.629 | 151 | 60 | 3 | 1 | 148 | 1 | 147 | 1.34e-34 | 126 |
| MsG0880043905.01.T01 | MTR_5g088230 | 66.129 | 62 | 20 | 1 | 235 | 296 | 183 | 243 | 1.51e-16 | 78.2 |
| MsG0880043905.01.T01 | MTR_5g088230 | 54.795 | 146 | 59 | 3 | 6 | 148 | 1 | 142 | 6.18e-32 | 119 |
| MsG0880043905.01.T01 | MTR_5g088230 | 66.129 | 62 | 20 | 1 | 235 | 296 | 178 | 238 | 1.62e-16 | 78.2 |
| MsG0880043905.01.T01 | MTR_3g101780 | 46.154 | 156 | 72 | 5 | 1 | 151 | 1 | 149 | 2.59e-31 | 121 |
| MsG0880043905.01.T01 | MTR_3g101780 | 63.235 | 68 | 22 | 1 | 229 | 296 | 333 | 397 | 6.64e-17 | 80.9 |
| MsG0880043905.01.T01 | MTR_2g086390 | 35.069 | 288 | 128 | 12 | 27 | 297 | 11 | 256 | 1.65e-30 | 116 |
| MsG0880043905.01.T01 | MTR_2g086390 | 35.088 | 285 | 126 | 12 | 27 | 294 | 11 | 253 | 2.63e-30 | 115 |
| MsG0880043905.01.T01 | MTR_2g086340 | 35.231 | 281 | 150 | 9 | 26 | 294 | 24 | 284 | 3.78e-30 | 116 |
| MsG0880043905.01.T01 | MTR_5g060990 | 31.667 | 300 | 158 | 10 | 16 | 273 | 4 | 298 | 4.91e-24 | 99.8 |
| MsG0880043905.01.T01 | MTR_4g094390 | 61.818 | 55 | 21 | 0 | 238 | 292 | 117 | 171 | 1.74e-12 | 65.5 |
| MsG0880043905.01.T01 | MTR_7g015990 | 71.429 | 49 | 11 | 1 | 251 | 296 | 120 | 168 | 1.04e-11 | 63.2 |
| MsG0880043905.01.T01 | MTR_5g022780 | 62.069 | 58 | 10 | 1 | 251 | 296 | 166 | 223 | 1.86e-11 | 63.5 |
| MsG0880043905.01.T01 | MTR_8g075130 | 58.182 | 55 | 20 | 1 | 243 | 294 | 97 | 151 | 3.97e-11 | 61.2 |
| MsG0880043905.01.T01 | MTR_1g098590 | 62.745 | 51 | 19 | 0 | 246 | 296 | 157 | 207 | 3.99e-11 | 62.4 |
| MsG0880043905.01.T01 | MTR_1g098590 | 62.745 | 51 | 19 | 0 | 246 | 296 | 157 | 207 | 4.77e-11 | 62.0 |
| MsG0880043905.01.T01 | MTR_1g098590 | 62.745 | 51 | 19 | 0 | 246 | 296 | 157 | 207 | 6.18e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880043905.01.T01 | AT3G56850 | 54.480 | 279 | 100 | 8 | 23 | 296 | 15 | 271 | 9.83e-78 | 239 |
| MsG0880043905.01.T01 | AT2G41070 | 49.462 | 279 | 81 | 9 | 23 | 297 | 15 | 237 | 1.11e-66 | 209 |
| MsG0880043905.01.T01 | AT2G41070 | 49.281 | 278 | 81 | 9 | 23 | 296 | 24 | 245 | 1.83e-65 | 206 |
| MsG0880043905.01.T01 | AT2G41070 | 49.281 | 278 | 81 | 9 | 23 | 296 | 15 | 236 | 1.84e-65 | 206 |
| MsG0880043905.01.T01 | AT2G41070 | 49.281 | 278 | 81 | 9 | 23 | 296 | 15 | 236 | 1.84e-65 | 206 |
| MsG0880043905.01.T01 | AT2G41070 | 49.281 | 278 | 81 | 9 | 23 | 296 | 15 | 236 | 1.84e-65 | 206 |
| MsG0880043905.01.T01 | AT2G36270 | 33.943 | 383 | 139 | 12 | 21 | 296 | 34 | 409 | 1.22e-38 | 141 |
| MsG0880043905.01.T01 | AT2G36270 | 33.943 | 383 | 139 | 12 | 21 | 296 | 34 | 409 | 1.22e-38 | 141 |
| MsG0880043905.01.T01 | AT2G36270 | 33.943 | 383 | 139 | 12 | 21 | 296 | 34 | 409 | 4.16e-38 | 140 |
| MsG0880043905.01.T01 | AT3G44460 | 39.456 | 294 | 130 | 13 | 18 | 294 | 29 | 291 | 7.93e-31 | 118 |
| MsG0880043905.01.T01 | AT3G19290 | 47.143 | 140 | 55 | 3 | 24 | 144 | 34 | 173 | 2.58e-26 | 107 |
| MsG0880043905.01.T01 | AT3G19290 | 47.143 | 140 | 55 | 3 | 24 | 144 | 34 | 173 | 2.76e-26 | 107 |
| MsG0880043905.01.T01 | AT3G19290 | 59.016 | 61 | 22 | 1 | 236 | 296 | 340 | 397 | 4.75e-14 | 72.4 |
| MsG0880043905.01.T01 | AT3G19290 | 47.143 | 140 | 55 | 3 | 24 | 144 | 34 | 173 | 4.47e-26 | 107 |
| MsG0880043905.01.T01 | AT3G19290 | 58.065 | 62 | 23 | 1 | 236 | 297 | 340 | 398 | 8.19e-14 | 71.6 |
| MsG0880043905.01.T01 | AT3G19290 | 47.143 | 140 | 55 | 3 | 24 | 144 | 34 | 173 | 4.75e-26 | 107 |
| MsG0880043905.01.T01 | AT3G19290 | 58.065 | 62 | 23 | 1 | 236 | 297 | 340 | 398 | 8.24e-14 | 71.6 |
| MsG0880043905.01.T01 | AT3G19290 | 47.143 | 140 | 55 | 3 | 24 | 144 | 34 | 173 | 4.75e-26 | 107 |
| MsG0880043905.01.T01 | AT3G19290 | 58.065 | 62 | 23 | 1 | 236 | 297 | 340 | 398 | 8.24e-14 | 71.6 |
| MsG0880043905.01.T01 | AT4G34000 | 39.752 | 161 | 57 | 3 | 24 | 144 | 27 | 187 | 2.28e-24 | 102 |
| MsG0880043905.01.T01 | AT4G34000 | 65.625 | 64 | 21 | 1 | 234 | 297 | 357 | 419 | 4.70e-17 | 81.3 |
| MsG0880043905.01.T01 | AT4G34000 | 39.752 | 161 | 57 | 3 | 24 | 144 | 27 | 187 | 2.63e-24 | 102 |
| MsG0880043905.01.T01 | AT4G34000 | 65.625 | 64 | 21 | 1 | 234 | 297 | 357 | 419 | 9.94e-17 | 80.5 |
| MsG0880043905.01.T01 | AT4G34000 | 39.752 | 161 | 57 | 3 | 24 | 144 | 27 | 187 | 2.63e-24 | 102 |
| MsG0880043905.01.T01 | AT4G34000 | 65.625 | 64 | 21 | 1 | 234 | 297 | 357 | 419 | 9.94e-17 | 80.5 |
| MsG0880043905.01.T01 | AT4G34000 | 39.752 | 161 | 57 | 3 | 24 | 144 | 27 | 187 | 2.63e-24 | 102 |
| MsG0880043905.01.T01 | AT4G34000 | 65.625 | 64 | 21 | 1 | 234 | 297 | 357 | 419 | 9.94e-17 | 80.5 |
| MsG0880043905.01.T01 | AT5G42910 | 29.683 | 347 | 147 | 14 | 23 | 297 | 19 | 340 | 4.17e-23 | 98.2 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 21 | 153 | 8.10e-22 | 94.4 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 21 | 153 | 8.10e-22 | 94.4 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 21 | 153 | 1.79e-21 | 94.0 |
| MsG0880043905.01.T01 | AT1G45249 | 67.213 | 61 | 16 | 1 | 236 | 296 | 326 | 382 | 9.57e-17 | 80.5 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 21 | 153 | 1.82e-21 | 94.0 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 21 | 153 | 1.82e-21 | 94.0 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 21 | 153 | 1.82e-21 | 94.0 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 21 | 153 | 1.82e-21 | 94.0 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 36 | 168 | 1.89e-21 | 94.0 |
| MsG0880043905.01.T01 | AT1G45249 | 67.213 | 61 | 16 | 1 | 236 | 296 | 341 | 397 | 1.17e-16 | 80.1 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 36 | 168 | 1.89e-21 | 94.0 |
| MsG0880043905.01.T01 | AT1G45249 | 67.213 | 61 | 16 | 1 | 236 | 296 | 341 | 397 | 1.17e-16 | 80.1 |
| MsG0880043905.01.T01 | AT1G45249 | 41.912 | 136 | 61 | 3 | 24 | 144 | 21 | 153 | 2.82e-21 | 93.6 |
| MsG0880043905.01.T01 | AT1G45249 | 56.944 | 72 | 16 | 2 | 236 | 296 | 326 | 393 | 7.65e-14 | 71.6 |
| MsG0880043905.01.T01 | AT5G44080 | 32.323 | 198 | 89 | 6 | 100 | 294 | 120 | 275 | 6.71e-16 | 77.0 |
| MsG0880043905.01.T01 | AT4G35900 | 60.656 | 61 | 22 | 1 | 236 | 296 | 202 | 260 | 1.01e-14 | 73.2 |
| MsG0880043905.01.T01 | AT1G49720 | 61.290 | 62 | 21 | 1 | 236 | 297 | 300 | 358 | 1.46e-13 | 70.9 |
| MsG0880043905.01.T01 | AT1G49720 | 61.290 | 62 | 21 | 1 | 236 | 297 | 300 | 358 | 1.64e-13 | 70.9 |
| MsG0880043905.01.T01 | AT1G49720 | 61.290 | 62 | 21 | 1 | 236 | 297 | 300 | 358 | 1.64e-13 | 70.9 |
| MsG0880043905.01.T01 | AT2G17770 | 60.345 | 58 | 21 | 1 | 236 | 293 | 112 | 167 | 4.78e-13 | 67.0 |
| MsG0880043905.01.T01 | AT1G03970 | 31.034 | 203 | 76 | 6 | 100 | 294 | 85 | 231 | 1.32e-11 | 64.3 |
Find 89 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCATTGGGTGCACCTCTTA+TGG | 0.223647 | 8:+32419378 | MsG0880043905.01.T01:CDS |
| TAACAGTGGTAATTGATAAA+TGG | 0.241554 | 8:+32418703 | MsG0880043905.01.T01:exon |
| GATGACATTGGAGGATTTCT+TGG | 0.249290 | 8:+32419108 | MsG0880043905.01.T01:CDS |
| GAGTGATGAACAAAGGTTTC+AGG | 0.283310 | 8:-32417780 | None:intergenic |
| GATGAAGTTCAAAATCAATT+AGG | 0.300260 | 8:+32418827 | MsG0880043905.01.T01:CDS |
| AAGGAGCACTCCGGAGGATA+TGG | 0.328607 | 8:+32419435 | MsG0880043905.01.T01:CDS |
| CAAAATCAATTAGGTGACTT+AGG | 0.335660 | 8:+32418836 | MsG0880043905.01.T01:CDS |
| CGAGAGAGACAAACTACTTT+AGG | 0.337274 | 8:+32419082 | MsG0880043905.01.T01:CDS |
| CGCAGATGCCTGGAAGAAAA+AGG | 0.341085 | 8:+32419416 | MsG0880043905.01.T01:CDS |
| CTGTTTCCGTGCTCTTGAAC+GGG | 0.379424 | 8:-32419515 | None:intergenic |
| GCCTTCATTGTCCGTATTCG+TGG | 0.383060 | 8:-32418927 | None:intergenic |
| CCGTTCAAGAGCACGGAAAC+AGG | 0.394263 | 8:+32419516 | MsG0880043905.01.T01:CDS |
| GGCTTACACAAATGAATTAG+AGG | 0.404750 | 8:+32419648 | MsG0880043905.01.T01:intron |
| TCTACAACGTCAAGCTAGTC+TGG | 0.406297 | 8:+32418973 | MsG0880043905.01.T01:CDS |
| GCATTGGGTGCACCTCTTAT+GGG | 0.408513 | 8:+32419379 | MsG0880043905.01.T01:CDS |
| AAAATTGAGCAACTGCCATT+TGG | 0.408571 | 8:+32417725 | None:intergenic |
| TCTAGGAACAGGGATCAAAT+TGG | 0.411529 | 8:+32418645 | MsG0880043905.01.T01:intron |
| CATTGTCCGTATTCGTGGAC+TGG | 0.421785 | 8:-32418922 | None:intergenic |
| TAAATGGAAATTCAGACAAT+GGG | 0.422470 | 8:+32418719 | MsG0880043905.01.T01:exon |
| AGAAGACTGTGGATGAGGTT+TGG | 0.422682 | 8:+32419017 | MsG0880043905.01.T01:CDS |
| TCTAGGTTCATACTGCTTAG+TGG | 0.432596 | 8:-32418863 | None:intergenic |
| AAAATCAATTAGGTGACTTA+GGG | 0.436185 | 8:+32418837 | MsG0880043905.01.T01:CDS |
| AGTATCACAGTTTCCTCTGC+AGG | 0.436415 | 8:+32419210 | MsG0880043905.01.T01:CDS |
| TCCGTTTGCAGATAGTCATA+TGG | 0.455759 | 8:+32419357 | MsG0880043905.01.T01:CDS |
| AGAAAAGGATGATCAAGAAT+CGG | 0.457820 | 8:+32419482 | MsG0880043905.01.T01:CDS |
| GCAGATAGTCATATGGCATT+GGG | 0.461753 | 8:+32419364 | MsG0880043905.01.T01:CDS |
| CTGTTGAGAGAAGGCAGAAA+AGG | 0.461801 | 8:+32419467 | MsG0880043905.01.T01:CDS |
| TGCAGATAGTCATATGGCAT+TGG | 0.465956 | 8:+32419363 | MsG0880043905.01.T01:CDS |
| CCTGTTTCCGTGCTCTTGAA+CGG | 0.468292 | 8:-32419516 | None:intergenic |
| GTGTCAGATACGCAGATGCC+TGG | 0.469471 | 8:+32419406 | MsG0880043905.01.T01:CDS |
| ATAAGCGAACCTTTGTTTGT+CGG | 0.470045 | 8:-32417870 | None:intergenic |
| TCTGACACAGTTCCCATAAG+AGG | 0.474734 | 8:-32419391 | None:intergenic |
| GCAGCCGTAGTATCGGTATT+CGG | 0.482465 | 8:-32419169 | None:intergenic |
| GAGGATTTCTTGGTGAAAGC+AGG | 0.483426 | 8:+32419118 | MsG0880043905.01.T01:CDS |
| GGGTCTCAAGGTGGTGGAGA+TGG | 0.487387 | 8:+32418740 | MsG0880043905.01.T01:CDS |
| CAGCAAGAAGACTGTGGATG+AGG | 0.491713 | 8:+32419012 | MsG0880043905.01.T01:CDS |
| TGATACTGCCACATTTGAAT+CGG | 0.495093 | 8:-32419194 | None:intergenic |
| TTTAGGAGAGATGACATTGG+AGG | 0.495208 | 8:+32419099 | MsG0880043905.01.T01:CDS |
| GGGGATTTATATGCCTAGCC+AGG | 0.498570 | 8:+32419288 | MsG0880043905.01.T01:CDS |
| TAAAGTTTCACGCCTGGAAG+AGG | 0.502778 | 8:+32419672 | MsG0880043905.01.T01:CDS |
| CATGGGGTCAGGTGCTTCGA+TGG | 0.509798 | 8:+32419330 | MsG0880043905.01.T01:CDS |
| AGTGATGAACAAAGGTTTCA+GGG | 0.517327 | 8:-32417779 | None:intergenic |
| CAGCCGTTACACATGGGGTC+AGG | 0.519930 | 8:+32419319 | MsG0880043905.01.T01:CDS |
| GCCATATGACTATCTGCAAA+CGG | 0.520435 | 8:-32419358 | None:intergenic |
| GAAAAGGATGATCAAGAATC+GGG | 0.521274 | 8:+32419483 | MsG0880043905.01.T01:CDS |
| TGTTGTAGATGCTGATATTG+TGG | 0.526222 | 8:-32419256 | None:intergenic |
| CAAGGTGGTGGAGATGGTAG+TGG | 0.530920 | 8:+32418746 | MsG0880043905.01.T01:CDS |
| GCATCTACAACAAAGTTCCA+TGG | 0.531471 | 8:+32419267 | MsG0880043905.01.T01:CDS |
| GGTGAACCAGTCCACGAATA+CGG | 0.535449 | 8:+32418916 | MsG0880043905.01.T01:CDS |
| GTCTTCTCCACCATATCCTC+CGG | 0.535473 | 8:-32419445 | None:intergenic |
| TGAAATGCTGAGGAAAAGAA+AGG | 0.539855 | 8:+32419699 | MsG0880043905.01.T01:CDS |
| AGTTTCCTCTGCAGGGTCAG+TGG | 0.540111 | 8:+32419218 | MsG0880043905.01.T01:CDS |
| AGAGGTTAAAGTTTCACGCC+TGG | 0.543773 | 8:+32419666 | MsG0880043905.01.T01:CDS |
| ATTCAGACAATGGGGTCTCA+AGG | 0.548755 | 8:+32418728 | MsG0880043905.01.T01:CDS |
| CATCTACAACAAAGTTCCAT+GGG | 0.551430 | 8:+32419268 | MsG0880043905.01.T01:CDS |
| AGATGCTGATATTGTGGTTG+CGG | 0.557999 | 8:-32419250 | None:intergenic |
| TTTCTCTCACCGACAAACAA+AGG | 0.564052 | 8:+32417861 | MsG0880043905.01.T01:five_prime_UTR |
| ACAATGGGGTCTCAAGGTGG+TGG | 0.565619 | 8:+32418734 | MsG0880043905.01.T01:CDS |
| ATAAATGGAAATTCAGACAA+TGG | 0.565908 | 8:+32418718 | MsG0880043905.01.T01:exon |
| TCCACGAATACGGACAATGA+AGG | 0.580287 | 8:+32418926 | MsG0880043905.01.T01:CDS |
| TAAACCGAATACCGATACTA+CGG | 0.583628 | 8:+32419165 | MsG0880043905.01.T01:CDS |
| CAAAGAAGAGTGATGAACAA+AGG | 0.587562 | 8:-32417787 | None:intergenic |
| CTGCTGCCCGTTCAAGAGCA+CGG | 0.591970 | 8:+32419509 | MsG0880043905.01.T01:CDS |
| TATAGCACAGCCGTTACACA+TGG | 0.595784 | 8:+32419312 | MsG0880043905.01.T01:CDS |
| TGGAGAAGACTGTTGAGAGA+AGG | 0.597925 | 8:+32419458 | MsG0880043905.01.T01:CDS |
| GAGCACTCCGGAGGATATGG+TGG | 0.597936 | 8:+32419438 | MsG0880043905.01.T01:CDS |
| ATCGGCCGCAGCCGTAGTAT+CGG | 0.598147 | 8:-32419176 | None:intergenic |
| GCACCTGACCCCATGTGTAA+CGG | 0.611183 | 8:-32419322 | None:intergenic |
| TTACTTTGTCTCTAGGAACA+GGG | 0.611259 | 8:+32418635 | MsG0880043905.01.T01:intron |
| GTATCACAGTTTCCTCTGCA+GGG | 0.615727 | 8:+32419211 | MsG0880043905.01.T01:CDS |
| GGCTGTGCTATACCCTGGCT+AGG | 0.624273 | 8:-32419301 | None:intergenic |
| CACAATTCCACTCTCTTGTG+CGG | 0.625308 | 8:+32418777 | MsG0880043905.01.T01:CDS |
| AAGAGGAAAATGAAATGCTG+AGG | 0.635284 | 8:+32419689 | MsG0880043905.01.T01:CDS |
| TACTTTAGGAGAGATGACAT+TGG | 0.639124 | 8:+32419096 | MsG0880043905.01.T01:CDS |
| GGCTGCGGCCGATTCAAATG+TGG | 0.639880 | 8:+32419186 | MsG0880043905.01.T01:CDS |
| GGGATTTATATGCCTAGCCA+GGG | 0.641870 | 8:+32419289 | MsG0880043905.01.T01:CDS |
| TGTAACCACTGACCCTGCAG+AGG | 0.647637 | 8:-32419223 | None:intergenic |
| GAATACCGATACTACGGCTG+CGG | 0.648846 | 8:+32419171 | MsG0880043905.01.T01:CDS |
| GCTAGGCATATAAATCCCCA+TGG | 0.652039 | 8:-32419284 | None:intergenic |
| GTGATGAACAAAGGTTTCAG+GGG | 0.669432 | 8:-32417778 | None:intergenic |
| CAGACAATGGGGTCTCAAGG+TGG | 0.676726 | 8:+32418731 | MsG0880043905.01.T01:CDS |
| TAGCACAGCCGTTACACATG+GGG | 0.677657 | 8:+32419314 | MsG0880043905.01.T01:CDS |
| ATGAAGTGAATTGTTAACAG+TGG | 0.684459 | 8:+32418689 | MsG0880043905.01.T01:five_prime_UTR |
| AAATGGAAATTCAGACAATG+GGG | 0.686793 | 8:+32418720 | MsG0880043905.01.T01:exon |
| GTAACGGCTGTGCTATACCC+TGG | 0.689448 | 8:-32419306 | None:intergenic |
| ATAGCACAGCCGTTACACAT+GGG | 0.689708 | 8:+32419313 | MsG0880043905.01.T01:CDS |
| TGCATTCAGCAAGAAGACTG+TGG | 0.700030 | 8:+32419006 | MsG0880043905.01.T01:CDS |
| ATCTACAACAAAGTTCCATG+GGG | 0.739377 | 8:+32419269 | MsG0880043905.01.T01:CDS |
| CCAACAAAAGAAAGACAACG+AGG | 0.748926 | 8:+32419048 | MsG0880043905.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGTTTTAATTTTGAATTC+TGG | + | Chr8:32418128-32418147 | MsG0880043905.01.T01:intron | 15.0% |
| !!! | AAGTTTTAATTTTGAATTCT+GGG | + | Chr8:32418129-32418148 | MsG0880043905.01.T01:intron | 15.0% |
| !!! | AATTTGGTATTATATTTTGT+CGG | + | Chr8:32418546-32418565 | MsG0880043905.01.T01:intron | 15.0% |
| !!! | TTGGATATTATTTTTTGTAA+GGG | - | Chr8:32418459-32418478 | None:intergenic | 15.0% |
| !!! | TTTGGATATTATTTTTTGTA+AGG | - | Chr8:32418460-32418479 | None:intergenic | 15.0% |
| !! | AAGCAATCTAAAGAAAATAA+TGG | + | Chr8:32418384-32418403 | MsG0880043905.01.T01:intron | 20.0% |
| !! | CAAAAACCAATCAAATAATA+AGG | - | Chr8:32419585-32419604 | None:intergenic | 20.0% |
| !!! | AATAAATGCTTTTTCTGTAA+TGG | + | Chr8:32418005-32418024 | MsG0880043905.01.T01:intron | 20.0% |
| !!! | AATTTGTGTGTTTTGAAAAT+GGG | + | Chr8:32418292-32418311 | MsG0880043905.01.T01:intron | 20.0% |
| !!! | ATAAATGCTTTTTCTGTAAT+GGG | + | Chr8:32418006-32418025 | MsG0880043905.01.T01:intron | 20.0% |
| !!! | ATCTCAATCACAATTTTTTT+TGG | - | Chr8:32418038-32418057 | None:intergenic | 20.0% |
| !!! | ATTTGGTATTATATTTTGTC+GGG | + | Chr8:32418547-32418566 | MsG0880043905.01.T01:intron | 20.0% |
| ! | AAAATCAATTAGGTGACTTA+GGG | + | Chr8:32418837-32418856 | MsG0880043905.01.T01:CDS | 25.0% |
| ! | ATAAATGGAAATTCAGACAA+TGG | + | Chr8:32418718-32418737 | MsG0880043905.01.T01:exon | 25.0% |
| ! | GAATAATTGCTTTAACAAAC+AGG | + | Chr8:32419627-32419646 | MsG0880043905.01.T01:intron | 25.0% |
| ! | GATGAAGTTCAAAATCAATT+AGG | + | Chr8:32418827-32418846 | MsG0880043905.01.T01:CDS | 25.0% |
| ! | GTAACATAAACTAAGAAAAG+AGG | - | Chr8:32417902-32417921 | None:intergenic | 25.0% |
| ! | TAAATGGAAATTCAGACAAT+GGG | + | Chr8:32418719-32418738 | MsG0880043905.01.T01:exon | 25.0% |
| ! | TAACAGTGGTAATTGATAAA+TGG | + | Chr8:32418703-32418722 | MsG0880043905.01.T01:exon | 25.0% |
| ! | TCTTTAGATTGCTTCAAAAA+GGG | - | Chr8:32418378-32418397 | None:intergenic | 25.0% |
| ! | TTCTTTAGATTGCTTCAAAA+AGG | - | Chr8:32418379-32418398 | None:intergenic | 25.0% |
| !! | AAAGCAATTATTCAGGTTTA+GGG | - | Chr8:32419620-32419639 | None:intergenic | 25.0% |
| !! | AATTGTGATTGAGATGTTTT+TGG | + | Chr8:32418043-32418062 | MsG0880043905.01.T01:intron | 25.0% |
| !! | GTTTGTTAAAGCAATTATTC+AGG | - | Chr8:32419627-32419646 | None:intergenic | 25.0% |
| !! | TAAAGCAATTATTCAGGTTT+AGG | - | Chr8:32419621-32419640 | None:intergenic | 25.0% |
| !! | TTTCTTTTTACTTTGTCTCT+AGG | + | Chr8:32418628-32418647 | MsG0880043905.01.T01:intron | 25.0% |
| !! | TTTGGTATTATATTTTGTCG+GGG | + | Chr8:32418548-32418567 | MsG0880043905.01.T01:intron | 25.0% |
| !!! | ATTTGTGTGTTTTGAAAATG+GGG | + | Chr8:32418293-32418312 | MsG0880043905.01.T01:intron | 25.0% |
| !!! | CAATTTGTGTGTTTTGAAAA+TGG | + | Chr8:32418291-32418310 | MsG0880043905.01.T01:intron | 25.0% |
| AAATGGAAATTCAGACAATG+GGG | + | Chr8:32418720-32418739 | MsG0880043905.01.T01:exon | 30.0% | |
| AATTATTGTGAGGACCAAAA+TGG | - | Chr8:32418432-32418451 | None:intergenic | 30.0% | |
| AGAAAAGGATGATCAAGAAT+CGG | + | Chr8:32419482-32419501 | MsG0880043905.01.T01:CDS | 30.0% | |
| ATGAAGTGAATTGTTAACAG+TGG | + | Chr8:32418689-32418708 | MsG0880043905.01.T01:five_prime_UTR | 30.0% | |
| ATTATTGTGAGGACCAAAAT+GGG | - | Chr8:32418431-32418450 | None:intergenic | 30.0% | |
| CAAAATCAATTAGGTGACTT+AGG | + | Chr8:32418836-32418855 | MsG0880043905.01.T01:CDS | 30.0% | |
| CAACAGTTTCATATGTAGAA+GGG | + | Chr8:32418488-32418507 | MsG0880043905.01.T01:intron | 30.0% | |
| CTTCTACATATGAAACTGTT+GGG | - | Chr8:32418489-32418508 | None:intergenic | 30.0% | |
| GAGTAAAAAACACAACCAAA+TGG | - | Chr8:32417743-32417762 | None:intergenic | 30.0% | |
| GCAAGTCCTTATTATTTGAT+TGG | + | Chr8:32419576-32419595 | MsG0880043905.01.T01:intron | 30.0% | |
| TAAGGGACTAAATTATTGTG+AGG | - | Chr8:32418442-32418461 | None:intergenic | 30.0% | |
| ! | AAACCATTTTCCTCATTTCA+CGG | - | Chr8:32418251-32418270 | None:intergenic | 30.0% |
| ! | GAAATGAGGAAAATGGTTTT+GGG | + | Chr8:32418252-32418271 | MsG0880043905.01.T01:intron | 30.0% |
| ! | TGAAATGAGGAAAATGGTTT+TGG | + | Chr8:32418251-32418270 | MsG0880043905.01.T01:intron | 30.0% |
| !! | TTTTGAGTAAAGACCCATTT+TGG | + | Chr8:32418415-32418434 | MsG0880043905.01.T01:intron | 30.0% |
| !!! | TGTTTTGAAAATGGGGTTTT+GGG | + | Chr8:32418300-32418319 | MsG0880043905.01.T01:intron | 30.0% |
| !!! | TTTTTTTGTTCCGTGAAATG+AGG | + | Chr8:32418238-32418257 | MsG0880043905.01.T01:intron | 30.0% |
| AAAATTGCCAGGGATCAAAT+TGG | + | Chr8:32418589-32418608 | MsG0880043905.01.T01:intron | 35.0% | |
| AAATTGCCAGGGATCAAATT+GGG | + | Chr8:32418590-32418609 | MsG0880043905.01.T01:intron | 35.0% | |
| AAGAGGAAAATGAAATGCTG+AGG | + | Chr8:32419689-32419708 | MsG0880043905.01.T01:CDS | 35.0% | |
| AGTGATGAACAAAGGTTTCA+GGG | - | Chr8:32417782-32417801 | None:intergenic | 35.0% | |
| ATCTACAACAAAGTTCCATG+GGG | + | Chr8:32419269-32419288 | MsG0880043905.01.T01:CDS | 35.0% | |
| ATTCAACAGTGACACTGAAT+TGG | + | Chr8:32418068-32418087 | MsG0880043905.01.T01:intron | 35.0% | |
| CAAAGAAGAGTGATGAACAA+AGG | - | Chr8:32417790-32417809 | None:intergenic | 35.0% | |
| CATCTACAACAAAGTTCCAT+GGG | + | Chr8:32419268-32419287 | MsG0880043905.01.T01:CDS | 35.0% | |
| CCAACAGTTTCATATGTAGA+AGG | + | Chr8:32418487-32418506 | MsG0880043905.01.T01:intron | 35.0% | |
| CCTTCTACATATGAAACTGT+TGG | - | Chr8:32418490-32418509 | None:intergenic | 35.0% | |
| GAAAAGGATGATCAAGAATC+GGG | + | Chr8:32419483-32419502 | MsG0880043905.01.T01:CDS | 35.0% | |
| GAAACTGTTGGGTACTAATT+TGG | - | Chr8:32418478-32418497 | None:intergenic | 35.0% | |
| GGCTTACACAAATGAATTAG+AGG | + | Chr8:32419648-32419667 | MsG0880043905.01.T01:intron | 35.0% | |
| TAAACCGAATACCGATACTA+CGG | + | Chr8:32419165-32419184 | MsG0880043905.01.T01:CDS | 35.0% | |
| TGAAATGCTGAGGAAAAGAA+AGG | + | Chr8:32419699-32419718 | MsG0880043905.01.T01:CDS | 35.0% | |
| TGATACTGCCACATTTGAAT+CGG | - | Chr8:32419197-32419216 | None:intergenic | 35.0% | |
| TGTTGTAGATGCTGATATTG+TGG | - | Chr8:32419259-32419278 | None:intergenic | 35.0% | |
| ! | ACGAGCTTCTGAAAAATGTA+TGG | + | Chr8:32418885-32418904 | MsG0880043905.01.T01:CDS | 35.0% |
| ! | ATAAGCGAACCTTTGTTTGT+CGG | - | Chr8:32417873-32417892 | None:intergenic | 35.0% |
| ! | ATTTTGTCGGGGACTAAATT+GGG | + | Chr8:32418559-32418578 | MsG0880043905.01.T01:intron | 35.0% |
| ! | GAAAAATGTATGGACTGTTG+AGG | + | Chr8:32418895-32418914 | MsG0880043905.01.T01:CDS | 35.0% |
| ! | TACTTTAGGAGAGATGACAT+TGG | + | Chr8:32419096-32419115 | MsG0880043905.01.T01:CDS | 35.0% |
| ! | TATTTTGTCGGGGACTAAAT+TGG | + | Chr8:32418558-32418577 | MsG0880043905.01.T01:intron | 35.0% |
| ! | TTACTTTGTCTCTAGGAACA+GGG | + | Chr8:32418635-32418654 | MsG0880043905.01.T01:intron | 35.0% |
| ! | TTTACTTTGTCTCTAGGAAC+AGG | + | Chr8:32418634-32418653 | MsG0880043905.01.T01:intron | 35.0% |
| !!! | GTGTTTTGAAAATGGGGTTT+TGG | + | Chr8:32418299-32418318 | MsG0880043905.01.T01:intron | 35.0% |
| AGATGCTGATATTGTGGTTG+CGG | - | Chr8:32419253-32419272 | None:intergenic | 40.0% | |
| CCAACAAAAGAAAGACAACG+AGG | + | Chr8:32419048-32419067 | MsG0880043905.01.T01:CDS | 40.0% | |
| CGAGAGAGACAAACTACTTT+AGG | + | Chr8:32419082-32419101 | MsG0880043905.01.T01:CDS | 40.0% | |
| CTGAATTGGTTGCATGCAAA+TGG | + | Chr8:32418082-32418101 | MsG0880043905.01.T01:intron | 40.0% | |
| GACAATGTCGGAGACTAATT+TGG | + | Chr8:32418530-32418549 | MsG0880043905.01.T01:intron | 40.0% | |
| GAGTGATGAACAAAGGTTTC+AGG | - | Chr8:32417783-32417802 | None:intergenic | 40.0% | |
| GATGACATTGGAGGATTTCT+TGG | + | Chr8:32419108-32419127 | MsG0880043905.01.T01:CDS | 40.0% | |
| GCAGATAGTCATATGGCATT+GGG | + | Chr8:32419364-32419383 | MsG0880043905.01.T01:CDS | 40.0% | |
| GCATCTACAACAAAGTTCCA+TGG | + | Chr8:32419267-32419286 | MsG0880043905.01.T01:CDS | 40.0% | |
| GCCATATGACTATCTGCAAA+CGG | - | Chr8:32419361-32419380 | None:intergenic | 40.0% | |
| GTGATGAACAAAGGTTTCAG+GGG | - | Chr8:32417781-32417800 | None:intergenic | 40.0% | |
| GTTCCGTGAAATGAGGAAAA+TGG | + | Chr8:32418245-32418264 | MsG0880043905.01.T01:intron | 40.0% | |
| TCCGTTTGCAGATAGTCATA+TGG | + | Chr8:32419357-32419376 | MsG0880043905.01.T01:CDS | 40.0% | |
| TCTAGGAACAGGGATCAAAT+TGG | + | Chr8:32418645-32418664 | MsG0880043905.01.T01:intron | 40.0% | |
| TCTAGGTTCATACTGCTTAG+TGG | - | Chr8:32418866-32418885 | None:intergenic | 40.0% | |
| TGAATACCCAATTTGATCCC+TGG | - | Chr8:32418599-32418618 | None:intergenic | 40.0% | |
| TGCAGATAGTCATATGGCAT+TGG | + | Chr8:32419363-32419382 | MsG0880043905.01.T01:CDS | 40.0% | |
| TGTTTGACCTTGCATGCAAA+GGG | + | Chr8:32418336-32418355 | MsG0880043905.01.T01:intron | 40.0% | |
| TTGTTTGACCTTGCATGCAA+AGG | + | Chr8:32418335-32418354 | MsG0880043905.01.T01:intron | 40.0% | |
| TTTAGGAGAGATGACATTGG+AGG | + | Chr8:32419099-32419118 | MsG0880043905.01.T01:CDS | 40.0% | |
| TTTCTCTCACCGACAAACAA+AGG | + | Chr8:32417861-32417880 | MsG0880043905.01.T01:five_prime_UTR | 40.0% | |
| ! | CCTCGTTGTCTTTCTTTTGT+TGG | - | Chr8:32419051-32419070 | None:intergenic | 40.0% |
| ! | GCATTTCATTTTCCTCTTCC+AGG | - | Chr8:32419687-32419706 | None:intergenic | 40.0% |
| !! | CATTTTTCAGAAGCTCGTCT+AGG | - | Chr8:32418883-32418902 | None:intergenic | 40.0% |
| AGAAGACTGTGGATGAGGTT+TGG | + | Chr8:32419017-32419036 | MsG0880043905.01.T01:CDS | 45.0% | |
| AGAGGTTAAAGTTTCACGCC+TGG | + | Chr8:32419666-32419685 | MsG0880043905.01.T01:CDS | 45.0% | |
| AGTATCACAGTTTCCTCTGC+AGG | + | Chr8:32419210-32419229 | MsG0880043905.01.T01:CDS | 45.0% | |
| ATAGCACAGCCGTTACACAT+GGG | + | Chr8:32419313-32419332 | MsG0880043905.01.T01:CDS | 45.0% | |
| ATTCAGACAATGGGGTCTCA+AGG | + | Chr8:32418728-32418747 | MsG0880043905.01.T01:CDS | 45.0% | |
| CACAATTCCACTCTCTTGTG+CGG | + | Chr8:32418777-32418796 | MsG0880043905.01.T01:CDS | 45.0% | |
| CTGTTGAGAGAAGGCAGAAA+AGG | + | Chr8:32419467-32419486 | MsG0880043905.01.T01:CDS | 45.0% | |
| GAGGATTTCTTGGTGAAAGC+AGG | + | Chr8:32419118-32419137 | MsG0880043905.01.T01:CDS | 45.0% | |
| GCTAGGCATATAAATCCCCA+TGG | - | Chr8:32419287-32419306 | None:intergenic | 45.0% | |
| GGGATTTATATGCCTAGCCA+GGG | + | Chr8:32419289-32419308 | MsG0880043905.01.T01:CDS | 45.0% | |
| GTATCACAGTTTCCTCTGCA+GGG | + | Chr8:32419211-32419230 | MsG0880043905.01.T01:CDS | 45.0% | |
| GTCTCCGACATTGTCGAATT+CGG | - | Chr8:32418525-32418544 | None:intergenic | 45.0% | |
| TAAAGTTTCACGCCTGGAAG+AGG | + | Chr8:32419672-32419691 | MsG0880043905.01.T01:CDS | 45.0% | |
| TATAGCACAGCCGTTACACA+TGG | + | Chr8:32419312-32419331 | MsG0880043905.01.T01:CDS | 45.0% | |
| TCCACGAATACGGACAATGA+AGG | + | Chr8:32418926-32418945 | MsG0880043905.01.T01:CDS | 45.0% | |
| TCTACAACGTCAAGCTAGTC+TGG | + | Chr8:32418973-32418992 | MsG0880043905.01.T01:CDS | 45.0% | |
| TCTCCGACATTGTCGAATTC+GGG | - | Chr8:32418524-32418543 | None:intergenic | 45.0% | |
| TCTGACACAGTTCCCATAAG+AGG | - | Chr8:32419394-32419413 | None:intergenic | 45.0% | |
| TCTTGATCCCTTTGCATGCA+AGG | - | Chr8:32418346-32418365 | None:intergenic | 45.0% | |
| TGCATTCAGCAAGAAGACTG+TGG | + | Chr8:32419006-32419025 | MsG0880043905.01.T01:CDS | 45.0% | |
| TGGAGAAGACTGTTGAGAGA+AGG | + | Chr8:32419458-32419477 | MsG0880043905.01.T01:CDS | 45.0% | |
| TGTCCCGAATTCGACAATGT+CGG | + | Chr8:32418518-32418537 | MsG0880043905.01.T01:intron | 45.0% | |
| ! | AATTTTGCCGCACAAGAGAG+TGG | - | Chr8:32418787-32418806 | None:intergenic | 45.0% |
| !! | TGGAAGAAAAAGGAGCACTC+CGG | + | Chr8:32419426-32419445 | MsG0880043905.01.T01:CDS | 45.0% |
| CAGCAAGAAGACTGTGGATG+AGG | + | Chr8:32419012-32419031 | MsG0880043905.01.T01:CDS | 50.0% | |
| CATTGTCCGTATTCGTGGAC+TGG | - | Chr8:32418925-32418944 | None:intergenic | 50.0% | |
| CCTGTTTCCGTGCTCTTGAA+CGG | - | Chr8:32419519-32419538 | None:intergenic | 50.0% | |
| CGCAGATGCCTGGAAGAAAA+AGG | + | Chr8:32419416-32419435 | MsG0880043905.01.T01:CDS | 50.0% | |
| CTGTTTCCGTGCTCTTGAAC+GGG | - | Chr8:32419518-32419537 | None:intergenic | 50.0% | |
| GAATACCGATACTACGGCTG+CGG | + | Chr8:32419171-32419190 | MsG0880043905.01.T01:CDS | 50.0% | |
| GCATTGGGTGCACCTCTTAT+GGG | + | Chr8:32419379-32419398 | MsG0880043905.01.T01:CDS | 50.0% | |
| GCCTTCATTGTCCGTATTCG+TGG | - | Chr8:32418930-32418949 | None:intergenic | 50.0% | |
| GGGGATTTATATGCCTAGCC+AGG | + | Chr8:32419288-32419307 | MsG0880043905.01.T01:CDS | 50.0% | |
| GGGTCACGAGAAAATTGCCA+GGG | + | Chr8:32418579-32418598 | MsG0880043905.01.T01:intron | 50.0% | |
| GGTGAACCAGTCCACGAATA+CGG | + | Chr8:32418916-32418935 | MsG0880043905.01.T01:CDS | 50.0% | |
| GTCTTCTCCACCATATCCTC+CGG | - | Chr8:32419448-32419467 | None:intergenic | 50.0% | |
| TAGCACAGCCGTTACACATG+GGG | + | Chr8:32419314-32419333 | MsG0880043905.01.T01:CDS | 50.0% | |
| TGGGTCACGAGAAAATTGCC+AGG | + | Chr8:32418578-32418597 | MsG0880043905.01.T01:intron | 50.0% | |
| !! | AAGAAAAAGGAGCACTCCGG+AGG | + | Chr8:32419429-32419448 | MsG0880043905.01.T01:CDS | 50.0% |
| !! | GCAGCCGTAGTATCGGTATT+CGG | - | Chr8:32419172-32419191 | None:intergenic | 50.0% |
| !! | GGAGTGCTCCTTTTTCTTCC+AGG | - | Chr8:32419427-32419446 | None:intergenic | 50.0% |
| ACAATGGGGTCTCAAGGTGG+TGG | + | Chr8:32418734-32418753 | MsG0880043905.01.T01:CDS | 55.0% | |
| AGTTTCCTCTGCAGGGTCAG+TGG | + | Chr8:32419218-32419237 | MsG0880043905.01.T01:CDS | 55.0% | |
| CAGACAATGGGGTCTCAAGG+TGG | + | Chr8:32418731-32418750 | MsG0880043905.01.T01:CDS | 55.0% | |
| GCACCTGACCCCATGTGTAA+CGG | - | Chr8:32419325-32419344 | None:intergenic | 55.0% | |
| GTAACGGCTGTGCTATACCC+TGG | - | Chr8:32419309-32419328 | None:intergenic | 55.0% | |
| GTGTCAGATACGCAGATGCC+TGG | + | Chr8:32419406-32419425 | MsG0880043905.01.T01:CDS | 55.0% | |
| TGTAACCACTGACCCTGCAG+AGG | - | Chr8:32419226-32419245 | None:intergenic | 55.0% | |
| ! | CCGTTCAAGAGCACGGAAAC+AGG | + | Chr8:32419516-32419535 | MsG0880043905.01.T01:CDS | 55.0% |
| ! | GGCATTGGGTGCACCTCTTA+TGG | + | Chr8:32419378-32419397 | MsG0880043905.01.T01:CDS | 55.0% |
| !! | AAGGAGCACTCCGGAGGATA+TGG | + | Chr8:32419435-32419454 | MsG0880043905.01.T01:CDS | 55.0% |
| !! | CAAGGTGGTGGAGATGGTAG+TGG | + | Chr8:32418746-32418765 | MsG0880043905.01.T01:CDS | 55.0% |
| ATCGGCCGCAGCCGTAGTAT+CGG | - | Chr8:32419179-32419198 | None:intergenic | 60.0% | |
| CAGCCGTTACACATGGGGTC+AGG | + | Chr8:32419319-32419338 | MsG0880043905.01.T01:CDS | 60.0% | |
| CATGGGGTCAGGTGCTTCGA+TGG | + | Chr8:32419330-32419349 | MsG0880043905.01.T01:CDS | 60.0% | |
| CTGCTGCCCGTTCAAGAGCA+CGG | + | Chr8:32419509-32419528 | MsG0880043905.01.T01:CDS | 60.0% | |
| GAGCACTCCGGAGGATATGG+TGG | + | Chr8:32419438-32419457 | MsG0880043905.01.T01:CDS | 60.0% | |
| GGCTGTGCTATACCCTGGCT+AGG | - | Chr8:32419304-32419323 | None:intergenic | 60.0% | |
| ! | GGCTGCGGCCGATTCAAATG+TGG | + | Chr8:32419186-32419205 | MsG0880043905.01.T01:CDS | 60.0% |
| !! | GGGTCTCAAGGTGGTGGAGA+TGG | + | Chr8:32418740-32418759 | MsG0880043905.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 32417732 | 32419726 | 32417732 | ID=MsG0880043905.01;Name=MsG0880043905.01 |
| Chr8 | mRNA | 32417732 | 32419726 | 32417732 | ID=MsG0880043905.01.T01;Parent=MsG0880043905.01;Name=MsG0880043905.01.T01;_AED=0.47;_eAED=0.47;_QI=223|1|0.66|1|0.5|0.33|3|0|297 |
| Chr8 | exon | 32417732 | 32417882 | 32417732 | ID=MsG0880043905.01.T01:exon:7904;Parent=MsG0880043905.01.T01 |
| Chr8 | exon | 32418650 | 32419537 | 32418650 | ID=MsG0880043905.01.T01:exon:7905;Parent=MsG0880043905.01.T01 |
| Chr8 | exon | 32419649 | 32419726 | 32419649 | ID=MsG0880043905.01.T01:exon:7906;Parent=MsG0880043905.01.T01 |
| Chr8 | five_prime_UTR | 32417732 | 32417882 | 32417732 | ID=MsG0880043905.01.T01:five_prime_utr;Parent=MsG0880043905.01.T01 |
| Chr8 | five_prime_UTR | 32418650 | 32418721 | 32418650 | ID=MsG0880043905.01.T01:five_prime_utr;Parent=MsG0880043905.01.T01 |
| Chr8 | CDS | 32418722 | 32419537 | 32418722 | ID=MsG0880043905.01.T01:cds;Parent=MsG0880043905.01.T01 |
| Chr8 | CDS | 32419649 | 32419726 | 32419649 | ID=MsG0880043905.01.T01:cds;Parent=MsG0880043905.01.T01 |
| Gene Sequence |
| Protein sequence |
