Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028901.01.T01 | XP_003616196.1 | 43.122 | 378 | 131 | 9 | 104 | 423 | 572 | 923 | 1.12E-67 | 243 |
| MsG0580028901.01.T01 | XP_003616196.1 | 33.408 | 446 | 228 | 12 | 1 | 397 | 161 | 586 | 2.78E-46 | 183 |
| MsG0580028901.01.T01 | XP_003616196.1 | 42.391 | 184 | 84 | 4 | 94 | 272 | 492 | 658 | 2.89E-27 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028901.01.T01 | Q9C9U0 | 28.631 | 482 | 260 | 16 | 1 | 408 | 176 | 647 | 3.18E-37 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028901.01.T01 | G7KFW7 | 43.122 | 378 | 131 | 9 | 104 | 423 | 572 | 923 | 5.34e-68 | 243 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048683.01 | MsG0580028901.01 | 0.806030 | 1.002461e-49 | 5.384877e-47 |
| MsG0080048761.01 | MsG0580028901.01 | -0.818134 | 2.297044e-52 | 1.705042e-49 |
| MsG0080048764.01 | MsG0580028901.01 | 0.809567 | 1.775439e-50 | 1.046027e-47 |
| MsG0080048817.01 | MsG0580028901.01 | 0.805294 | 1.430877e-49 | 7.542133e-47 |
| MsG0080049148.01 | MsG0580028901.01 | 0.811223 | 7.793327e-51 | 4.796847e-48 |
| MsG0180000152.01 | MsG0580028901.01 | 0.821498 | 3.911363e-53 | 3.187326e-50 |
| MsG0180000240.01 | MsG0580028901.01 | -0.809322 | 2.003580e-50 | 1.172759e-47 |
| MsG0180000470.01 | MsG0580028901.01 | 0.803150 | 3.998916e-49 | 1.994750e-46 |
| MsG0180000546.01 | MsG0580028901.01 | 0.820026 | 8.525761e-53 | 6.669889e-50 |
| MsG0180000550.01 | MsG0580028901.01 | 0.822803 | 1.947989e-53 | 1.647453e-50 |
| MsG0180000679.01 | MsG0580028901.01 | 0.821104 | 4.821155e-53 | 3.886176e-50 |
| MsG0180000828.01 | MsG0580028901.01 | 0.811013 | 8.654431e-51 | 5.298063e-48 |
| MsG0180001141.01 | MsG0580028901.01 | 0.833562 | 4.967290e-56 | 5.741690e-53 |
| MsG0180001213.01 | MsG0580028901.01 | 0.820287 | 7.429034e-53 | 5.853551e-50 |
| MsG0180002458.01 | MsG0580028901.01 | 0.821804 | 3.322247e-53 | 2.730952e-50 |
| MsG0180002482.01 | MsG0580028901.01 | 0.840003 | 1.129400e-57 | 1.587401e-54 |
| MsG0180003124.01 | MsG0580028901.01 | 0.805175 | 1.515707e-49 | 7.964946e-47 |
| MsG0180003854.01 | MsG0580028901.01 | 0.835498 | 1.620015e-56 | 1.984626e-53 |
| MsG0180003952.01 | MsG0580028901.01 | 0.823357 | 1.447004e-53 | 1.242949e-50 |
| MsG0180004997.01 | MsG0580028901.01 | 0.802293 | 6.008117e-49 | 2.932359e-46 |
| MsG0180005052.01 | MsG0580028901.01 | 0.800948 | 1.134420e-48 | 5.351126e-46 |
| MsG0180005424.01 | MsG0580028901.01 | 0.800122 | 1.671565e-48 | 7.720949e-46 |
| MsG0180005686.01 | MsG0580028901.01 | 0.815470 | 9.093335e-52 | 6.275434e-49 |
| MsG0180006144.01 | MsG0580028901.01 | 0.820717 | 5.917842e-53 | 4.718722e-50 |
| MsG0180006220.01 | MsG0580028901.01 | 0.826796 | 2.228133e-54 | 2.111053e-51 |
| MsG0280011032.01 | MsG0580028901.01 | 0.810364 | 1.196122e-50 | 7.195822e-48 |
| MsG0280011059.01 | MsG0580028901.01 | -0.831181 | 1.930960e-55 | 2.079368e-52 |
| MsG0280011376.01 | MsG0580028901.01 | 0.812947 | 3.280101e-51 | 2.113648e-48 |
| MsG0380011895.01 | MsG0580028901.01 | 0.827926 | 1.194656e-54 | 1.169792e-51 |
| MsG0380012310.01 | MsG0580028901.01 | 0.810772 | 9.762857e-51 | 5.937752e-48 |
| MsG0380012566.01 | MsG0580028901.01 | 0.819515 | 1.115521e-52 | 8.602723e-50 |
| MsG0380012661.01 | MsG0580028901.01 | -0.824571 | 7.510169e-54 | 6.678220e-51 |
| MsG0380013853.01 | MsG0580028901.01 | 0.820975 | 5.163389e-53 | 4.147341e-50 |
| MsG0380014770.01 | MsG0580028901.01 | 0.823693 | 1.207098e-53 | 1.047056e-50 |
| MsG0480018964.01 | MsG0580028901.01 | 0.832577 | 8.729949e-56 | 9.798300e-53 |
| MsG0480019126.01 | MsG0580028901.01 | 0.806669 | 7.351360e-50 | 4.013553e-47 |
| MsG0480019434.01 | MsG0580028901.01 | 0.809810 | 1.574312e-50 | 9.335067e-48 |
| MsG0480020136.01 | MsG0580028901.01 | 0.820370 | 7.111561e-53 | 5.616450e-50 |
| MsG0480020839.01 | MsG0580028901.01 | 0.804288 | 2.321009e-49 | 1.192120e-46 |
| MsG0480020874.01 | MsG0580028901.01 | 0.804425 | 2.173451e-49 | 1.120219e-46 |
| MsG0480021164.01 | MsG0580028901.01 | 0.823267 | 1.518395e-53 | 1.301056e-50 |
| MsG0480021215.01 | MsG0580028901.01 | 0.801931 | 7.134348e-49 | 3.449839e-46 |
| MsG0480021536.01 | MsG0580028901.01 | 0.801140 | 1.036283e-48 | 4.912043e-46 |
| MsG0480021776.01 | MsG0580028901.01 | -0.817883 | 2.616612e-52 | 1.928956e-49 |
| MsG0480021853.01 | MsG0580028901.01 | 0.844798 | 6.046032e-59 | 9.873026e-56 |
| MsG0480022052.01 | MsG0580028901.01 | -0.834288 | 3.267940e-56 | 3.860985e-53 |
| MsG0480022222.01 | MsG0580028901.01 | 0.872648 | 2.707004e-67 | 1.141566e-63 |
| MsG0480022768.01 | MsG0580028901.01 | 0.824208 | 9.143466e-54 | 8.045857e-51 |
| MsG0480023174.01 | MsG0580028901.01 | 0.835068 | 2.080640e-56 | 2.515939e-53 |
| MsG0480023814.01 | MsG0580028901.01 | 0.837106 | 6.321959e-57 | 8.128752e-54 |
| MsG0580024165.01 | MsG0580028901.01 | 0.805438 | 1.334672e-49 | 7.061157e-47 |
| MsG0580024495.01 | MsG0580028901.01 | 0.842663 | 2.253186e-58 | 3.440233e-55 |
| MsG0580024935.01 | MsG0580028901.01 | 0.800879 | 1.171826e-48 | 5.517924e-46 |
| MsG0580025182.01 | MsG0580028901.01 | -0.807113 | 5.922482e-50 | 3.270871e-47 |
| MsG0580025448.01 | MsG0580028901.01 | 0.842075 | 3.226498e-58 | 4.836528e-55 |
| MsG0580025467.01 | MsG0580028901.01 | 0.834253 | 3.336270e-56 | 3.937432e-53 |
| MsG0380015164.01 | MsG0580028901.01 | 0.801218 | 9.989114e-49 | 4.744026e-46 |
| MsG0380015166.01 | MsG0580028901.01 | 0.817959 | 2.516053e-52 | 1.858628e-49 |
| MsG0380015216.01 | MsG0580028901.01 | 0.815262 | 1.011736e-51 | 6.941626e-49 |
| MsG0380015466.01 | MsG0580028901.01 | 0.803695 | 3.083897e-49 | 1.559986e-46 |
| MsG0380015964.01 | MsG0580028901.01 | 0.803147 | 4.005104e-49 | 1.997608e-46 |
| MsG0380015965.01 | MsG0580028901.01 | 0.830212 | 3.335002e-55 | 3.490935e-52 |
| MsG0380016004.01 | MsG0580028901.01 | 0.862790 | 3.947310e-64 | 1.170475e-60 |
| MsG0380016182.01 | MsG0580028901.01 | 0.808411 | 3.138288e-50 | 1.793137e-47 |
| MsG0380016191.01 | MsG0580028901.01 | -0.835859 | 1.312535e-56 | 1.625424e-53 |
| MsG0380016828.01 | MsG0580028901.01 | -0.840343 | 9.205218e-58 | 1.307280e-54 |
| MsG0380016910.01 | MsG0580028901.01 | 0.807952 | 3.930195e-50 | 2.218598e-47 |
| MsG0380017023.01 | MsG0580028901.01 | 0.820635 | 6.181701e-53 | 4.917586e-50 |
| MsG0380017178.01 | MsG0580028901.01 | -0.831964 | 1.238478e-55 | 1.365129e-52 |
| MsG0380017263.01 | MsG0580028901.01 | -0.818232 | 2.182681e-52 | 1.624460e-49 |
| MsG0380017551.01 | MsG0580028901.01 | -0.806554 | 7.773330e-50 | 4.231800e-47 |
| MsG0380017680.01 | MsG0580028901.01 | 0.834367 | 3.123183e-56 | 3.698594e-53 |
| MsG0380017746.01 | MsG0580028901.01 | 0.820262 | 7.527548e-53 | 5.927175e-50 |
| MsG0380017866.01 | MsG0580028901.01 | 0.828429 | 9.032855e-55 | 8.976546e-52 |
| MsG0580026777.01 | MsG0580028901.01 | 0.807104 | 5.949457e-50 | 3.284913e-47 |
| MsG0580027344.01 | MsG0580028901.01 | 0.808749 | 2.657638e-50 | 1.531934e-47 |
| MsG0580028044.01 | MsG0580028901.01 | 0.822653 | 2.111254e-53 | 1.778048e-50 |
| MsG0580028901.01 | MsG0580029355.01 | 0.820555 | 6.449119e-53 | 5.119356e-50 |
| MsG0580028901.01 | MsG0580029717.01 | 0.824138 | 9.493173e-54 | 8.337159e-51 |
| MsG0580028901.01 | MsG0580029924.01 | 0.810261 | 1.258452e-50 | 7.550471e-48 |
| MsG0580028901.01 | MsG0580029925.01 | 0.818784 | 1.636331e-52 | 1.236592e-49 |
| MsG0580028901.01 | MsG0680030415.01 | 0.835661 | 1.473802e-56 | 1.814257e-53 |
| MsG0580028901.01 | MsG0680030597.01 | 0.805925 | 1.055073e-49 | 5.652176e-47 |
| MsG0580028901.01 | MsG0680030636.01 | 0.819966 | 8.800142e-53 | 6.872632e-50 |
| MsG0580028901.01 | MsG0680031334.01 | 0.833022 | 6.769681e-56 | 7.700107e-53 |
| MsG0580028901.01 | MsG0680031355.01 | 0.800185 | 1.622602e-48 | 7.506855e-46 |
| MsG0580028901.01 | MsG0680031379.01 | 0.804454 | 2.144106e-49 | 1.105923e-46 |
| MsG0580028901.01 | MsG0680032204.01 | 0.811720 | 6.079148e-51 | 3.791176e-48 |
| MsG0580028901.01 | MsG0680035659.01 | 0.823554 | 1.301053e-53 | 1.123899e-50 |
| MsG0580028901.01 | MsG0680035704.01 | 0.824334 | 8.537915e-54 | 7.539591e-51 |
| MsG0580028901.01 | MsG0780035948.01 | 0.817795 | 2.740172e-52 | 2.015200e-49 |
| MsG0580028901.01 | MsG0780036705.01 | 0.852470 | 4.518949e-61 | 9.452081e-58 |
| MsG0580028901.01 | MsG0780036964.01 | 0.819796 | 9.621640e-53 | 7.479005e-50 |
| MsG0580028901.01 | MsG0780037082.01 | 0.824149 | 9.440373e-54 | 8.293350e-51 |
| MsG0580028901.01 | MsG0780037512.01 | 0.809102 | 2.233636e-50 | 1.299759e-47 |
| MsG0580028901.01 | MsG0780039143.01 | 0.820501 | 6.633001e-53 | 5.257453e-50 |
| MsG0580028901.01 | MsG0780039258.01 | 0.808536 | 2.951727e-50 | 1.692039e-47 |
| MsG0580028901.01 | MsG0780039867.01 | -0.815973 | 7.027033e-52 | 4.916261e-49 |
| MsG0580028901.01 | MsG0780040566.01 | -0.823389 | 1.421784e-53 | 1.222381e-50 |
| MsG0580028901.01 | MsG0780040576.01 | -0.820302 | 7.369144e-53 | 5.808880e-50 |
| MsG0580028901.01 | MsG0780040596.01 | 0.856674 | 2.741771e-62 | 6.594300e-59 |
| MsG0580028901.01 | MsG0780040858.01 | 0.807324 | 5.343015e-50 | 2.967242e-47 |
| MsG0580028901.01 | MsG0780041137.01 | 0.812236 | 4.693599e-51 | 2.968166e-48 |
| MsG0580028901.01 | MsG0780041402.01 | 0.804568 | 2.029458e-49 | 1.049899e-46 |
| MsG0580028901.01 | MsG0780041441.01 | 0.803841 | 2.875234e-49 | 1.459978e-46 |
| MsG0580028901.01 | MsG0780041507.01 | 0.807486 | 4.936450e-50 | 2.753018e-47 |
| MsG0580028901.01 | MsG0880042294.01 | 0.830849 | 2.329355e-55 | 2.484030e-52 |
| MsG0580028901.01 | MsG0880042314.01 | 0.810422 | 1.161865e-50 | 7.000326e-48 |
| MsG0580028901.01 | MsG0880042966.01 | 0.831935 | 1.258856e-55 | 1.386496e-52 |
| MsG0580028901.01 | MsG0880043303.01 | 0.806965 | 6.365327e-50 | 3.502043e-47 |
| MsG0580028901.01 | MsG0880043509.01 | 0.801714 | 7.902922e-49 | 3.800495e-46 |
| MsG0580028901.01 | MsG0880043905.01 | 0.831173 | 1.939492e-55 | 2.088146e-52 |
| MsG0580028901.01 | MsG0880045133.01 | 0.803798 | 2.935861e-49 | 1.489040e-46 |
| MsG0580028901.01 | MsG0880045605.01 | -0.804734 | 1.873488e-49 | 9.734746e-47 |
| MsG0580028901.01 | MsG0880045765.01 | 0.800665 | 1.295335e-48 | 6.066383e-46 |
| MsG0580028901.01 | MsG0880046285.01 | 0.830501 | 2.833819e-55 | 2.990990e-52 |
| MsG0580028901.01 | MsG0880046384.01 | -0.828277 | 9.830142e-55 | 9.725092e-52 |
| MsG0580028901.01 | MsG0880046569.01 | -0.802098 | 6.590923e-49 | 3.200701e-46 |
| MsG0580028901.01 | MsG0880046930.01 | 0.833641 | 4.746176e-56 | 5.498754e-53 |
| MsG0580028901.01 | MsG0880047427.01 | 0.805550 | 1.264660e-49 | 6.709775e-47 |
| MsG0580028901.01 | MsG0880047448.01 | 0.808582 | 2.885090e-50 | 1.655803e-47 |
| MsG0580028901.01 | MsG0880047608.01 | 0.822315 | 2.529362e-53 | 2.109726e-50 |
| MsG0580028901.01 | MsG0880047763.01 | 0.804962 | 1.679447e-49 | 8.777488e-47 |
| MsG0280007164.01 | MsG0580028901.01 | 0.807035 | 6.152820e-50 | 3.391324e-47 |
| MsG0280007222.01 | MsG0580028901.01 | 0.807777 | 4.282393e-50 | 2.406355e-47 |
| MsG0280007763.01 | MsG0580028901.01 | 0.805272 | 1.445997e-49 | 7.617405e-47 |
| MsG0280009395.01 | MsG0580028901.01 | -0.814377 | 1.589543e-51 | 1.064820e-48 |
| MsG0280010204.01 | MsG0580028901.01 | 0.801473 | 8.855204e-49 | 4.232741e-46 |
| MsG0280010443.01 | MsG0580028901.01 | 0.813404 | 2.603627e-51 | 1.698791e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028901.01.T01 | MTR_5g077220 | 43.122 | 378 | 131 | 9 | 104 | 423 | 572 | 923 | 1.35e-71 | 243 |
| MsG0580028901.01.T01 | MTR_5g077220 | 33.408 | 446 | 228 | 12 | 1 | 397 | 161 | 586 | 3.36e-50 | 183 |
| MsG0580028901.01.T01 | MTR_5g077220 | 42.391 | 184 | 84 | 4 | 94 | 272 | 492 | 658 | 3.50e-31 | 127 |
| MsG0580028901.01.T01 | MTR_8g103480 | 25.000 | 316 | 195 | 8 | 102 | 394 | 148 | 444 | 4.89e-18 | 87.0 |
| MsG0580028901.01.T01 | MTR_5g042370 | 21.250 | 480 | 291 | 11 | 13 | 412 | 213 | 685 | 6.24e-16 | 80.5 |
| MsG0580028901.01.T01 | MTR_1g040725 | 21.250 | 480 | 291 | 11 | 13 | 412 | 793 | 1265 | 3.30e-15 | 78.6 |
| MsG0580028901.01.T01 | MTR_4g108060 | 25.602 | 332 | 204 | 12 | 103 | 410 | 102 | 414 | 5.11e-15 | 77.0 |
| MsG0580028901.01.T01 | MTR_3g054110 | 26.752 | 314 | 175 | 11 | 104 | 408 | 109 | 376 | 5.42e-15 | 77.4 |
| MsG0580028901.01.T01 | MTR_4g108060 | 25.680 | 331 | 203 | 12 | 104 | 410 | 237 | 548 | 7.36e-15 | 77.0 |
| MsG0580028901.01.T01 | MTR_1g090120 | 24.586 | 362 | 228 | 11 | 86 | 408 | 340 | 695 | 9.85e-15 | 77.0 |
| MsG0580028901.01.T01 | MTR_4g074390 | 25.602 | 332 | 204 | 12 | 103 | 410 | 236 | 548 | 3.06e-14 | 75.1 |
| MsG0580028901.01.T01 | MTR_8g054410 | 25.294 | 340 | 211 | 11 | 103 | 403 | 248 | 583 | 1.14e-13 | 73.6 |
| MsG0580028901.01.T01 | MTR_3g115270 | 25.155 | 322 | 201 | 10 | 92 | 393 | 307 | 608 | 1.70e-13 | 73.2 |
| MsG0580028901.01.T01 | MTR_1g112240 | 24.762 | 315 | 187 | 10 | 104 | 410 | 174 | 446 | 1.89e-13 | 72.8 |
| MsG0580028901.01.T01 | MTR_4g068360 | 25.551 | 227 | 122 | 7 | 104 | 325 | 429 | 613 | 3.07e-13 | 72.0 |
| MsG0580028901.01.T01 | MTR_7g091410 | 24.625 | 333 | 207 | 11 | 104 | 416 | 329 | 637 | 4.38e-13 | 72.0 |
| MsG0580028901.01.T01 | MTR_7g091410 | 24.551 | 334 | 208 | 11 | 103 | 416 | 189 | 498 | 4.80e-13 | 71.6 |
| MsG0580028901.01.T01 | MTR_8g105170 | 24.620 | 329 | 195 | 9 | 105 | 423 | 315 | 600 | 5.47e-13 | 71.6 |
| MsG0580028901.01.T01 | MTR_7g091410 | 24.551 | 334 | 208 | 11 | 103 | 416 | 124 | 433 | 5.67e-13 | 71.2 |
| MsG0580028901.01.T01 | MTR_1g048080 | 20.991 | 343 | 216 | 10 | 86 | 402 | 501 | 814 | 5.68e-13 | 71.6 |
| MsG0580028901.01.T01 | MTR_7g091410 | 24.551 | 334 | 208 | 11 | 103 | 416 | 83 | 392 | 7.76e-13 | 70.9 |
| MsG0580028901.01.T01 | MTR_1g008310 | 22.330 | 309 | 189 | 8 | 104 | 403 | 181 | 447 | 2.44e-12 | 69.3 |
| MsG0580028901.01.T01 | MTR_6g079830 | 21.317 | 319 | 214 | 8 | 104 | 403 | 192 | 492 | 3.38e-12 | 68.9 |
| MsG0580028901.01.T01 | MTR_6g079920 | 21.630 | 319 | 213 | 8 | 104 | 403 | 192 | 492 | 3.87e-12 | 68.6 |
| MsG0580028901.01.T01 | MTR_3g088505 | 26.943 | 193 | 119 | 5 | 81 | 269 | 250 | 424 | 5.17e-12 | 67.8 |
| MsG0580028901.01.T01 | MTR_5g090210 | 25.484 | 310 | 196 | 8 | 104 | 395 | 310 | 602 | 6.11e-12 | 68.2 |
| MsG0580028901.01.T01 | MTR_5g090210 | 23.478 | 230 | 138 | 6 | 103 | 314 | 519 | 728 | 3.24e-11 | 65.9 |
| MsG0580028901.01.T01 | MTR_3g105900 | 23.964 | 338 | 204 | 9 | 78 | 405 | 245 | 539 | 8.73e-12 | 67.8 |
| MsG0580028901.01.T01 | MTR_3g061000 | 24.865 | 185 | 119 | 4 | 104 | 284 | 281 | 449 | 1.47e-11 | 66.6 |
| MsG0580028901.01.T01 | MTR_1g033960 | 24.375 | 320 | 184 | 13 | 104 | 411 | 301 | 574 | 2.00e-11 | 66.6 |
| MsG0580028901.01.T01 | MTR_1g033960 | 27.692 | 260 | 136 | 9 | 104 | 356 | 371 | 585 | 3.28e-11 | 65.9 |
| MsG0580028901.01.T01 | MTR_2g102210 | 24.316 | 329 | 193 | 11 | 104 | 403 | 303 | 604 | 3.05e-11 | 65.9 |
| MsG0580028901.01.T01 | MTR_1g114300 | 26.012 | 173 | 108 | 3 | 103 | 271 | 316 | 472 | 3.51e-11 | 65.5 |
| MsG0580028901.01.T01 | MTR_6g471100 | 21.795 | 312 | 211 | 6 | 104 | 398 | 245 | 540 | 3.70e-11 | 65.9 |
| MsG0580028901.01.T01 | MTR_5g029690 | 22.892 | 332 | 208 | 11 | 86 | 393 | 201 | 508 | 4.02e-11 | 65.5 |
| MsG0580028901.01.T01 | MTR_2g036080 | 26.728 | 217 | 133 | 7 | 79 | 271 | 192 | 406 | 5.01e-11 | 65.5 |
| MsG0580028901.01.T01 | MTR_2g036560 | 25.078 | 319 | 202 | 9 | 104 | 403 | 310 | 610 | 5.81e-11 | 65.1 |
| MsG0580028901.01.T01 | MTR_3g033040 | 25.984 | 254 | 152 | 10 | 102 | 338 | 238 | 472 | 6.03e-11 | 64.7 |
| MsG0580028901.01.T01 | MTR_3g033040 | 25.641 | 273 | 164 | 11 | 102 | 357 | 238 | 488 | 6.11e-11 | 64.7 |
| MsG0580028901.01.T01 | MTR_7g076550 | 29.442 | 197 | 121 | 6 | 218 | 398 | 174 | 368 | 6.78e-11 | 64.7 |
| MsG0580028901.01.T01 | MTR_2g049740 | 24.837 | 306 | 189 | 10 | 104 | 388 | 334 | 619 | 7.40e-11 | 64.7 |
| MsG0580028901.01.T01 | MTR_7g103600 | 24.348 | 345 | 192 | 9 | 103 | 398 | 260 | 584 | 8.17e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580028901.01.T01 | AT1G73710 | 28.631 | 482 | 260 | 16 | 1 | 408 | 176 | 647 | 3.24e-38 | 148 |
| MsG0580028901.01.T01 | AT1G73710 | 30.328 | 366 | 181 | 8 | 104 | 415 | 587 | 932 | 1.25e-36 | 143 |
| MsG0580028901.01.T01 | AT1G73710 | 34.503 | 171 | 92 | 3 | 105 | 271 | 518 | 672 | 2.67e-20 | 94.4 |
| MsG0580028901.01.T01 | AT3G23020 | 24.038 | 416 | 240 | 12 | 13 | 398 | 258 | 627 | 5.58e-20 | 93.2 |
| MsG0580028901.01.T01 | AT3G23020 | 22.449 | 343 | 213 | 10 | 100 | 414 | 503 | 820 | 3.09e-14 | 75.5 |
| MsG0580028901.01.T01 | AT5G39710 | 25.926 | 351 | 220 | 10 | 104 | 416 | 242 | 590 | 1.20e-18 | 89.0 |
| MsG0580028901.01.T01 | AT5G21222 | 25.959 | 339 | 208 | 12 | 80 | 394 | 401 | 720 | 1.97e-18 | 88.6 |
| MsG0580028901.01.T01 | AT5G21222 | 25.959 | 339 | 208 | 12 | 80 | 394 | 401 | 720 | 1.97e-18 | 88.6 |
| MsG0580028901.01.T01 | AT5G21222 | 25.959 | 339 | 208 | 12 | 80 | 394 | 401 | 720 | 1.97e-18 | 88.6 |
| MsG0580028901.01.T01 | AT5G21222 | 25.959 | 339 | 208 | 12 | 80 | 394 | 401 | 720 | 1.97e-18 | 88.6 |
| MsG0580028901.01.T01 | AT2G35130 | 25.269 | 372 | 204 | 12 | 78 | 410 | 129 | 465 | 2.88e-17 | 84.7 |
| MsG0580028901.01.T01 | AT2G35130 | 25.067 | 375 | 204 | 12 | 78 | 410 | 151 | 490 | 1.49e-16 | 82.4 |
| MsG0580028901.01.T01 | AT2G35130 | 25.067 | 375 | 204 | 12 | 78 | 410 | 129 | 468 | 1.74e-16 | 82.0 |
| MsG0580028901.01.T01 | AT1G64583 | 26.899 | 316 | 187 | 11 | 95 | 388 | 145 | 438 | 5.61e-15 | 77.4 |
| MsG0580028901.01.T01 | AT1G64583 | 26.899 | 316 | 187 | 11 | 95 | 388 | 170 | 463 | 5.97e-15 | 77.4 |
| MsG0580028901.01.T01 | AT3G04760 | 24.629 | 337 | 174 | 12 | 105 | 398 | 161 | 460 | 7.38e-15 | 77.0 |
| MsG0580028901.01.T01 | AT1G09900 | 26.944 | 360 | 191 | 14 | 104 | 410 | 174 | 514 | 7.67e-15 | 77.0 |
| MsG0580028901.01.T01 | AT2G31400 | 25.234 | 321 | 190 | 10 | 104 | 398 | 305 | 601 | 8.47e-15 | 77.4 |
| MsG0580028901.01.T01 | AT2G31400 | 25.234 | 321 | 190 | 10 | 104 | 398 | 305 | 601 | 9.73e-15 | 77.0 |
| MsG0580028901.01.T01 | AT3G22470 | 24.172 | 302 | 183 | 7 | 105 | 395 | 248 | 514 | 2.20e-14 | 75.9 |
| MsG0580028901.01.T01 | AT5G02860 | 22.832 | 346 | 224 | 8 | 87 | 410 | 229 | 553 | 2.67e-14 | 75.9 |
| MsG0580028901.01.T01 | AT5G02860 | 22.832 | 346 | 224 | 8 | 87 | 410 | 229 | 553 | 2.67e-14 | 75.9 |
| MsG0580028901.01.T01 | AT5G02860 | 22.832 | 346 | 224 | 8 | 87 | 410 | 229 | 553 | 2.67e-14 | 75.9 |
| MsG0580028901.01.T01 | AT5G02860 | 22.832 | 346 | 224 | 8 | 87 | 410 | 229 | 553 | 2.67e-14 | 75.9 |
| MsG0580028901.01.T01 | AT5G02860 | 22.832 | 346 | 224 | 8 | 87 | 410 | 229 | 553 | 2.67e-14 | 75.9 |
| MsG0580028901.01.T01 | AT3G22470 | 24.841 | 314 | 191 | 8 | 105 | 395 | 248 | 539 | 5.68e-14 | 74.3 |
| MsG0580028901.01.T01 | AT1G63130 | 23.460 | 341 | 223 | 10 | 78 | 398 | 231 | 553 | 6.34e-14 | 74.3 |
| MsG0580028901.01.T01 | AT1G63130 | 23.460 | 341 | 223 | 10 | 78 | 398 | 231 | 553 | 6.34e-14 | 74.3 |
| MsG0580028901.01.T01 | AT1G63400 | 21.884 | 361 | 230 | 10 | 47 | 398 | 240 | 557 | 6.94e-14 | 73.9 |
| MsG0580028901.01.T01 | AT1G62720 | 25.163 | 306 | 168 | 12 | 105 | 398 | 177 | 433 | 1.05e-13 | 73.2 |
| MsG0580028901.01.T01 | AT2G18940 | 23.853 | 327 | 214 | 6 | 104 | 412 | 283 | 592 | 1.18e-13 | 73.6 |
| MsG0580028901.01.T01 | AT2G18940 | 23.625 | 309 | 183 | 6 | 105 | 403 | 213 | 478 | 9.61e-12 | 67.8 |
| MsG0580028901.01.T01 | AT1G62930 | 23.765 | 324 | 196 | 10 | 83 | 398 | 272 | 552 | 1.24e-13 | 73.6 |
| MsG0580028901.01.T01 | AT2G41720 | 23.344 | 317 | 188 | 11 | 103 | 391 | 321 | 610 | 1.96e-13 | 73.2 |
| MsG0580028901.01.T01 | AT2G41720 | 23.344 | 317 | 188 | 11 | 103 | 391 | 321 | 610 | 2.00e-13 | 72.8 |
| MsG0580028901.01.T01 | AT2G41720 | 23.344 | 317 | 188 | 11 | 103 | 391 | 189 | 478 | 2.33e-13 | 72.8 |
| MsG0580028901.01.T01 | AT5G01110 | 22.832 | 346 | 188 | 10 | 103 | 430 | 271 | 555 | 2.34e-13 | 72.8 |
| MsG0580028901.01.T01 | AT5G01110 | 22.857 | 350 | 191 | 10 | 103 | 434 | 299 | 587 | 2.75e-13 | 72.4 |
| MsG0580028901.01.T01 | AT3G16710 | 25.987 | 304 | 175 | 8 | 103 | 398 | 189 | 450 | 2.84e-13 | 72.0 |
| MsG0580028901.01.T01 | AT3G16710 | 23.385 | 325 | 196 | 13 | 83 | 398 | 205 | 485 | 3.42e-13 | 71.6 |
| MsG0580028901.01.T01 | AT1G63070 | 23.841 | 302 | 181 | 8 | 105 | 398 | 253 | 513 | 5.21e-13 | 71.2 |
| MsG0580028901.01.T01 | AT1G62670 | 24.848 | 330 | 197 | 9 | 78 | 398 | 231 | 518 | 1.09e-12 | 70.5 |
| MsG0580028901.01.T01 | AT1G62670 | 24.848 | 330 | 197 | 9 | 78 | 398 | 231 | 518 | 1.09e-12 | 70.5 |
| MsG0580028901.01.T01 | AT3G16710 | 25.581 | 301 | 174 | 8 | 103 | 395 | 189 | 447 | 1.82e-12 | 69.3 |
| MsG0580028901.01.T01 | AT2G32630 | 22.293 | 314 | 192 | 7 | 104 | 408 | 261 | 531 | 2.19e-12 | 69.3 |
| MsG0580028901.01.T01 | AT4G31850 | 23.692 | 325 | 179 | 8 | 104 | 410 | 260 | 533 | 2.20e-12 | 69.7 |
| MsG0580028901.01.T01 | AT1G62910 | 22.848 | 302 | 185 | 7 | 104 | 398 | 295 | 555 | 3.15e-12 | 68.9 |
| MsG0580028901.01.T01 | AT1G62680 | 22.849 | 337 | 215 | 10 | 103 | 416 | 191 | 505 | 4.99e-12 | 68.2 |
| MsG0580028901.01.T01 | AT1G62680 | 22.849 | 337 | 215 | 10 | 103 | 416 | 191 | 505 | 4.99e-12 | 68.2 |
| MsG0580028901.01.T01 | AT5G25630 | 23.077 | 312 | 201 | 8 | 102 | 391 | 99 | 393 | 7.47e-12 | 67.8 |
| MsG0580028901.01.T01 | AT5G25630 | 23.077 | 312 | 201 | 8 | 102 | 391 | 150 | 444 | 8.42e-12 | 67.4 |
| MsG0580028901.01.T01 | AT5G04810 | 23.385 | 325 | 190 | 10 | 104 | 398 | 521 | 816 | 8.75e-12 | 67.8 |
| MsG0580028901.01.T01 | AT5G65560 | 24.528 | 318 | 184 | 9 | 100 | 408 | 286 | 556 | 8.78e-12 | 67.8 |
| MsG0580028901.01.T01 | AT5G65560 | 24.611 | 321 | 206 | 9 | 105 | 407 | 186 | 488 | 5.12e-11 | 65.5 |
| MsG0580028901.01.T01 | AT5G65560 | 24.528 | 318 | 184 | 9 | 100 | 408 | 286 | 556 | 8.78e-12 | 67.8 |
| MsG0580028901.01.T01 | AT5G65560 | 24.611 | 321 | 206 | 9 | 105 | 407 | 186 | 488 | 5.12e-11 | 65.5 |
| MsG0580028901.01.T01 | AT5G65560 | 24.528 | 318 | 184 | 9 | 100 | 408 | 286 | 556 | 8.78e-12 | 67.8 |
| MsG0580028901.01.T01 | AT5G65560 | 24.611 | 321 | 206 | 9 | 105 | 407 | 186 | 488 | 5.12e-11 | 65.5 |
| MsG0580028901.01.T01 | AT1G12700 | 24.479 | 192 | 120 | 5 | 104 | 271 | 316 | 506 | 1.30e-11 | 67.0 |
| MsG0580028901.01.T01 | AT1G12700 | 24.479 | 192 | 120 | 5 | 104 | 271 | 316 | 506 | 1.30e-11 | 67.0 |
| MsG0580028901.01.T01 | AT1G12700 | 24.479 | 192 | 120 | 5 | 104 | 271 | 300 | 490 | 1.30e-11 | 67.0 |
| MsG0580028901.01.T01 | AT3G59040 | 26.543 | 162 | 99 | 3 | 104 | 261 | 316 | 461 | 1.30e-11 | 67.0 |
| MsG0580028901.01.T01 | AT3G59040 | 26.543 | 162 | 99 | 3 | 104 | 261 | 323 | 468 | 1.34e-11 | 67.0 |
| MsG0580028901.01.T01 | AT4G01030 | 23.344 | 317 | 195 | 7 | 107 | 419 | 265 | 537 | 1.51e-11 | 67.0 |
| MsG0580028901.01.T01 | AT1G05670 | 26.000 | 300 | 170 | 10 | 104 | 394 | 388 | 644 | 1.82e-11 | 66.6 |
| MsG0580028901.01.T01 | AT1G05670 | 26.000 | 300 | 170 | 10 | 104 | 394 | 388 | 644 | 1.82e-11 | 66.6 |
| MsG0580028901.01.T01 | AT1G05670 | 26.000 | 300 | 170 | 10 | 104 | 394 | 388 | 644 | 1.82e-11 | 66.6 |
| MsG0580028901.01.T01 | AT1G09680 | 25.316 | 316 | 198 | 10 | 92 | 388 | 266 | 562 | 2.78e-11 | 65.9 |
| MsG0580028901.01.T01 | AT1G19290 | 23.602 | 322 | 198 | 6 | 88 | 403 | 144 | 423 | 3.65e-11 | 65.9 |
| MsG0580028901.01.T01 | AT1G19290 | 23.602 | 322 | 198 | 6 | 88 | 403 | 144 | 423 | 3.65e-11 | 65.9 |
| MsG0580028901.01.T01 | AT1G31430 | 24.586 | 362 | 190 | 13 | 100 | 424 | 110 | 425 | 3.93e-11 | 65.5 |
| MsG0580028901.01.T01 | AT1G31430 | 24.586 | 362 | 190 | 13 | 100 | 424 | 110 | 425 | 3.93e-11 | 65.5 |
| MsG0580028901.01.T01 | AT1G31840 | 29.101 | 189 | 100 | 6 | 213 | 395 | 280 | 440 | 4.05e-11 | 65.9 |
| MsG0580028901.01.T01 | AT1G31840 | 29.101 | 189 | 100 | 6 | 213 | 395 | 280 | 440 | 4.14e-11 | 65.5 |
| MsG0580028901.01.T01 | AT2G01740 | 24.771 | 327 | 212 | 10 | 103 | 410 | 57 | 368 | 5.13e-11 | 65.1 |
| MsG0580028901.01.T01 | AT4G20090 | 25.083 | 303 | 187 | 9 | 103 | 383 | 293 | 577 | 6.07e-11 | 65.1 |
| MsG0580028901.01.T01 | AT4G20090 | 25.083 | 303 | 187 | 9 | 103 | 383 | 293 | 577 | 6.07e-11 | 65.1 |
| MsG0580028901.01.T01 | AT1G03560 | 24.855 | 173 | 110 | 3 | 103 | 271 | 258 | 414 | 6.75e-11 | 64.7 |
| MsG0580028901.01.T01 | AT5G61990 | 23.197 | 319 | 206 | 9 | 105 | 403 | 350 | 649 | 6.97e-11 | 65.1 |
| MsG0580028901.01.T01 | AT5G41170 | 22.082 | 317 | 201 | 9 | 105 | 396 | 215 | 510 | 9.68e-11 | 64.3 |
Find 100 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGATGAGCATTCTCTTCC+TGG | 0.227634 | 5:-88300917 | MsG0580028901.01.T01:CDS |
| ATTAATCTGGTTGGTTGTTA+TGG | 0.255643 | 5:-88299558 | MsG0580028901.01.T01:CDS |
| AAGCATAAGGTTTCCCTTCC+TGG | 0.264935 | 5:+88299787 | None:intergenic |
| TAGTATGTTGTTGATTGTTA+TGG | 0.293722 | 5:-88301695 | MsG0580028901.01.T01:CDS |
| CGATCTCTCCATATTCTAAT+AGG | 0.293725 | 5:+88299496 | None:intergenic |
| TCTGCTGCTCTGCTTGTAGA+TGG | 0.321080 | 5:+88300225 | None:intergenic |
| TCAGAAGTTTCAAATGTATA+GGG | 0.328635 | 5:-88300841 | MsG0580028901.01.T01:CDS |
| ATGCCTATAAAATTTGCAAT+AGG | 0.329979 | 5:-88299441 | MsG0580028901.01.T01:CDS |
| TTCCACTTGATGCAAGAATC+TGG | 0.344744 | 5:-88300324 | MsG0580028901.01.T01:CDS |
| ACCCAGCACTTATCATTTCC+TGG | 0.347446 | 5:+88300426 | None:intergenic |
| AACTGTTCTGCCGCTTCAAC+AGG | 0.356522 | 5:+88299822 | None:intergenic |
| ATACATAGCCTATTAGAATA+TGG | 0.357209 | 5:-88299504 | MsG0580028901.01.T01:CDS |
| TTCAGAAGTTTCAAATGTAT+AGG | 0.371260 | 5:-88300842 | MsG0580028901.01.T01:CDS |
| CATTGTAACGTACATTAATC+TGG | 0.377648 | 5:-88299571 | MsG0580028901.01.T01:CDS |
| ACTGCTTTGTACTCTTTACT+TGG | 0.387282 | 5:-88299750 | MsG0580028901.01.T01:intron |
| AAAGAACTGCTTGAAACTAA+TGG | 0.387706 | 5:+88301438 | None:intergenic |
| AGTATGTTGTTGATTGTTAT+GGG | 0.387889 | 5:-88301694 | MsG0580028901.01.T01:CDS |
| GCACCATACACAACCTCATT+TGG | 0.391858 | 5:+88300399 | None:intergenic |
| AAGAACTGCTTGAAACTAAT+GGG | 0.419420 | 5:+88301439 | None:intergenic |
| TGCCTATAAAATTTGCAATA+GGG | 0.421384 | 5:-88299440 | MsG0580028901.01.T01:CDS |
| TGCGTTATGCACAGAGAATA+TGG | 0.425829 | 5:-88300993 | MsG0580028901.01.T01:CDS |
| TTCACTATACTAAAGAAAGC+AGG | 0.434487 | 5:-88299849 | MsG0580028901.01.T01:CDS |
| GTGTATGGTGCTATAATAAA+CGG | 0.438942 | 5:-88300387 | MsG0580028901.01.T01:CDS |
| GGGAGTTTGATAAGGCTGAT+AGG | 0.446108 | 5:-88301558 | MsG0580028901.01.T01:CDS |
| TACCAGGAAATGATAAGTGC+TGG | 0.447704 | 5:-88300428 | MsG0580028901.01.T01:CDS |
| ACTATCAAAGTTCCATCATC+TGG | 0.448921 | 5:+88299876 | None:intergenic |
| ATAGATTTGTATGGCAAGGC+TGG | 0.450374 | 5:-88301310 | MsG0580028901.01.T01:CDS |
| GCGGGATAAGCACGTGGAAC+CGG | 0.450595 | 5:-88299595 | MsG0580028901.01.T01:CDS |
| GTAACTTACAGAGCTCTTCT+CGG | 0.451738 | 5:-88301016 | MsG0580028901.01.T01:CDS |
| ATGCACAGAGAATATGGTTC+AGG | 0.459410 | 5:-88300987 | MsG0580028901.01.T01:CDS |
| TTTGCTGATATGATGAAATC+TGG | 0.462153 | 5:-88301262 | MsG0580028901.01.T01:intron |
| AATACTCTGATAGATTTGTA+TGG | 0.463420 | 5:-88301319 | MsG0580028901.01.T01:CDS |
| CCTACTGAAGTCTTATAGTA+AGG | 0.470394 | 5:-88300271 | MsG0580028901.01.T01:CDS |
| TAGGTAGCTTGTGAAGCATA+AGG | 0.472780 | 5:+88299774 | None:intergenic |
| TGTTATGGGAAAGGTGGTCT+TGG | 0.473884 | 5:-88301680 | MsG0580028901.01.T01:intron |
| AGAGAATATGGTTCAGGCGG+TGG | 0.474837 | 5:-88300981 | MsG0580028901.01.T01:CDS |
| ATGGTGTGTGCTCGATGAAA+TGG | 0.476095 | 5:-88300957 | MsG0580028901.01.T01:CDS |
| TTAATGTACGTTACAATGTC+CGG | 0.476920 | 5:+88299576 | None:intergenic |
| GTTGTTGATTGTTATGGGAA+AGG | 0.479293 | 5:-88301689 | MsG0580028901.01.T01:CDS |
| TTATAGTAAGGCAGGCGACT+TGG | 0.486818 | 5:-88300259 | MsG0580028901.01.T01:CDS |
| GGATGTTTGGGAGTTTGATA+AGG | 0.487781 | 5:-88301566 | MsG0580028901.01.T01:CDS |
| TCTAATATGTTGCGATGGAT+AGG | 0.495618 | 5:-88301379 | MsG0580028901.01.T01:CDS |
| AGTGGTAGACAGCCGAGGTT+CGG | 0.500516 | 5:+88301345 | None:intergenic |
| TACCAATGGCTCTAGATTGT+CGG | 0.503121 | 5:-88301464 | MsG0580028901.01.T01:CDS |
| GTCAAGATGTATATTAATGA+AGG | 0.506741 | 5:-88300890 | MsG0580028901.01.T01:CDS |
| AGCGGAGTGATCGTTGTTCA+AGG | 0.507542 | 5:-88299473 | MsG0580028901.01.T01:CDS |
| TATGCTCTGCTGGAGATGTT+GGG | 0.508801 | 5:-88299644 | MsG0580028901.01.T01:intron |
| ATATACATCTTGACAATGCC+AGG | 0.511795 | 5:+88300899 | None:intergenic |
| CTGAAGTCTTATAGTAAGGC+AGG | 0.511912 | 5:-88300267 | MsG0580028901.01.T01:CDS |
| ATCCAGATTCTTGCATCAAG+TGG | 0.514291 | 5:+88300322 | None:intergenic |
| CCTTACTATAAGACTTCAGT+AGG | 0.521926 | 5:+88300271 | None:intergenic |
| GCAGAGCAGCAGAACATGGA+AGG | 0.522588 | 5:-88300215 | MsG0580028901.01.T01:CDS |
| GTAACGTACATTAATCTGGT+TGG | 0.523005 | 5:-88299567 | MsG0580028901.01.T01:CDS |
| TGATGCAGTCATTGTATACC+AGG | 0.527629 | 5:-88300444 | MsG0580028901.01.T01:intron |
| TAGAGTTGTGTTACCAGGAA+GGG | 0.530808 | 5:-88299800 | MsG0580028901.01.T01:CDS |
| ACAGTTAGAGTTGTGTTACC+AGG | 0.534819 | 5:-88299805 | MsG0580028901.01.T01:CDS |
| CACCGACAATCTAGAGCCAT+TGG | 0.535967 | 5:+88301462 | None:intergenic |
| TGAATTACTACATGAGATGA+TGG | 0.536651 | 5:-88299916 | MsG0580028901.01.T01:CDS |
| GTTGGTTGTTATGGAAAAGC+TGG | 0.537288 | 5:-88299549 | MsG0580028901.01.T01:CDS |
| CAGAGCAGCAGAACATGGAA+GGG | 0.539033 | 5:-88300214 | MsG0580028901.01.T01:CDS |
| GGAAAAGCTGGCATGGTTGA+AGG | 0.541388 | 5:-88299537 | MsG0580028901.01.T01:CDS |
| AAACCAAATGAGGTTGTGTA+TGG | 0.545751 | 5:-88300402 | MsG0580028901.01.T01:CDS |
| TAAAGAGTACAAAGCAGTGT+AGG | 0.546831 | 5:+88299755 | None:intergenic |
| AGTAAGGCAGGCGACTTGGA+AGG | 0.546955 | 5:-88300255 | MsG0580028901.01.T01:CDS |
| ACAAGCAGAGCAGCAGAACA+TGG | 0.547285 | 5:-88300219 | MsG0580028901.01.T01:CDS |
| GTTGATTGTTATGGGAAAGG+TGG | 0.551287 | 5:-88301686 | MsG0580028901.01.T01:CDS |
| TCGGATTGTGCTACTACCAA+TGG | 0.556218 | 5:-88301478 | MsG0580028901.01.T01:CDS |
| TCACTATACTAAAGAAAGCA+GGG | 0.558613 | 5:-88299848 | MsG0580028901.01.T01:CDS |
| ATCTATCAGAGTATTGTAAG+TGG | 0.559053 | 5:+88301327 | None:intergenic |
| TAAGGCAGGCGACTTGGAAG+GGG | 0.559323 | 5:-88300253 | MsG0580028901.01.T01:CDS |
| GGTAGACAGCCGAGGTTCGG+AGG | 0.559602 | 5:+88301348 | None:intergenic |
| AGCAGGGTTTCCTGTTGAAG+CGG | 0.560407 | 5:-88299832 | MsG0580028901.01.T01:CDS |
| CGAATGTGAATCTCATATCT+CGG | 0.561571 | 5:+88299410 | None:intergenic |
| ATATGGTTCAGGCGGTGGAA+TGG | 0.571671 | 5:-88300976 | MsG0580028901.01.T01:CDS |
| AGAGCAGCAGAACATGGAAG+GGG | 0.573146 | 5:-88300213 | MsG0580028901.01.T01:CDS |
| GAATATATATATGAAGATGC+GGG | 0.579218 | 5:-88299613 | MsG0580028901.01.T01:CDS |
| ACCAGGAAATGATAAGTGCT+GGG | 0.580366 | 5:-88300427 | MsG0580028901.01.T01:CDS |
| ATACTATAAGTATTATTCGT+CGG | 0.580561 | 5:+88301712 | None:intergenic |
| GTAAGGCAGGCGACTTGGAA+GGG | 0.581001 | 5:-88300254 | MsG0580028901.01.T01:CDS |
| TGAATATATATATGAAGATG+CGG | 0.583109 | 5:-88299614 | MsG0580028901.01.T01:CDS |
| GTGTGATGGGAAAGTTGACT+TGG | 0.592628 | 5:-88301521 | MsG0580028901.01.T01:CDS |
| TCTGATAGATTTGTATGGCA+AGG | 0.593503 | 5:-88301314 | MsG0580028901.01.T01:CDS |
| TAGATTTGTATGGCAAGGCT+GGG | 0.597815 | 5:-88301309 | MsG0580028901.01.T01:CDS |
| GTGCTGGGTTAAACCAAATG+AGG | 0.602820 | 5:-88300412 | MsG0580028901.01.T01:CDS |
| TTGTTATGGAAAAGCTGGCA+TGG | 0.607042 | 5:-88299544 | MsG0580028901.01.T01:CDS |
| CGGATTCTAATATGTTGCGA+TGG | 0.609870 | 5:-88301384 | MsG0580028901.01.T01:CDS |
| CTCTGCTGGAGATGTTGGGA+AGG | 0.610944 | 5:-88299640 | MsG0580028901.01.T01:intron |
| GAGATAGCTCCTCCGAACCT+CGG | 0.612306 | 5:-88301357 | MsG0580028901.01.T01:CDS |
| CACAGAGAATATGGTTCAGG+CGG | 0.624562 | 5:-88300984 | MsG0580028901.01.T01:CDS |
| AATAGGCAATTTCACAAGTG+CGG | 0.626490 | 5:-88299939 | MsG0580028901.01.T01:intron |
| TAGAATATGGAGAGATCGAG+CGG | 0.631990 | 5:-88299491 | MsG0580028901.01.T01:CDS |
| TTAGAGTTGTGTTACCAGGA+AGG | 0.634241 | 5:-88299801 | MsG0580028901.01.T01:CDS |
| CTTACTATAAGACTTCAGTA+GGG | 0.634360 | 5:+88300272 | None:intergenic |
| ATAAACGGATTTGCAGAACA+TGG | 0.651312 | 5:-88300372 | MsG0580028901.01.T01:CDS |
| AGAACATGGTAGTCTTGATG+AGG | 0.672205 | 5:-88300358 | MsG0580028901.01.T01:CDS |
| GCAGCACATACAATGGATGA+CGG | 0.673360 | 5:+88300816 | None:intergenic |
| GAGCAGCAGAACATGGAAGG+GGG | 0.678539 | 5:-88300212 | MsG0580028901.01.T01:CDS |
| ATTTGTATGGCAAGGCTGGG+CGG | 0.681937 | 5:-88301306 | MsG0580028901.01.T01:CDS |
| TTGTAAGTGGTAGACAGCCG+AGG | 0.684313 | 5:+88301340 | None:intergenic |
| GAAGATGCGGGATAAGCACG+TGG | 0.722707 | 5:-88299601 | MsG0580028901.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTATAAGTATTATTCGT+CGG | + | Chr5:88299431-88299450 | None:intergenic | 20.0% |
| !! | ATGTATGTTTATAAAGACAT+CGG | - | Chr5:88301080-88301099 | MsG0580028901.01.T01:intron | 20.0% |
| !! | TGAATATATATATGAAGATG+CGG | - | Chr5:88301526-88301545 | MsG0580028901.01.T01:CDS | 20.0% |
| !! | TTCTATATTCAAATGTTATC+TGG | - | Chr5:88300554-88300573 | MsG0580028901.01.T01:intron | 20.0% |
| !! | TTTATAAAAATTGGTGTGAT+GGG | - | Chr5:88299606-88299625 | MsG0580028901.01.T01:CDS | 20.0% |
| !!! | CTGATAGGTTTTATAAAAAT+TGG | - | Chr5:88299597-88299616 | MsG0580028901.01.T01:CDS | 20.0% |
| !!! | TTTTATAAAAATTGGTGTGA+TGG | - | Chr5:88299605-88299624 | MsG0580028901.01.T01:CDS | 20.0% |
| ! | AATACGATGATCTTTATTAG+TGG | - | Chr5:88299925-88299944 | MsG0580028901.01.T01:CDS | 25.0% |
| ! | AATACTCTGATAGATTTGTA+TGG | - | Chr5:88299821-88299840 | MsG0580028901.01.T01:CDS | 25.0% |
| ! | ATACATAGCCTATTAGAATA+TGG | - | Chr5:88301636-88301655 | MsG0580028901.01.T01:intron | 25.0% |
| ! | ATGCCTATAAAATTTGCAAT+AGG | - | Chr5:88301699-88301718 | MsG0580028901.01.T01:CDS | 25.0% |
| ! | GAATATATATATGAAGATGC+GGG | - | Chr5:88301527-88301546 | MsG0580028901.01.T01:CDS | 25.0% |
| ! | GTCAAGATGTATATTAATGA+AGG | - | Chr5:88300250-88300269 | MsG0580028901.01.T01:CDS | 25.0% |
| ! | TCAGAAGTTTCAAATGTATA+GGG | - | Chr5:88300299-88300318 | MsG0580028901.01.T01:CDS | 25.0% |
| ! | TGCCTATAAAATTTGCAATA+GGG | - | Chr5:88301700-88301719 | MsG0580028901.01.T01:CDS | 25.0% |
| ! | TTATTATAGAAGGATTAGAG+AGG | - | Chr5:88300081-88300100 | MsG0580028901.01.T01:intron | 25.0% |
| ! | TTCAGAAGTTTCAAATGTAT+AGG | - | Chr5:88300298-88300317 | MsG0580028901.01.T01:CDS | 25.0% |
| ! | TTTGAAAAATTGAAAGAGAC+TGG | - | Chr5:88301026-88301045 | MsG0580028901.01.T01:intron | 25.0% |
| !! | AGTATGTTGTTGATTGTTAT+GGG | - | Chr5:88299446-88299465 | MsG0580028901.01.T01:CDS | 25.0% |
| !! | ATCCCTATTGCAAATTTTAT+AGG | + | Chr5:88301705-88301724 | None:intergenic | 25.0% |
| !! | TAGTATGTTGTTGATTGTTA+TGG | - | Chr5:88299445-88299464 | MsG0580028901.01.T01:CDS | 25.0% |
| !! | TTTTTATAGGAAAAGAGACA+AGG | - | Chr5:88300397-88300416 | MsG0580028901.01.T01:CDS | 25.0% |
| !!! | AAGCGGAGAATATTTTTTAT+AGG | - | Chr5:88300384-88300403 | MsG0580028901.01.T01:CDS | 25.0% |
| AAAGAACTGCTTGAAACTAA+TGG | + | Chr5:88299705-88299724 | None:intergenic | 30.0% | |
| AAGAACTGCTTGAAACTAAT+GGG | + | Chr5:88299704-88299723 | None:intergenic | 30.0% | |
| AGATTGTGTTTCCTATAACA+AGG | - | Chr5:88301159-88301178 | MsG0580028901.01.T01:intron | 30.0% | |
| CATTGTAACGTACATTAATC+TGG | - | Chr5:88301569-88301588 | MsG0580028901.01.T01:CDS | 30.0% | |
| CTAGTTAAAATGGAAGAGAA+GGG | - | Chr5:88299981-88300000 | MsG0580028901.01.T01:intron | 30.0% | |
| CTGAATCTTGCTAGTTAAAA+TGG | - | Chr5:88299971-88299990 | MsG0580028901.01.T01:intron | 30.0% | |
| CTGCTCTTTCTTATTATAGA+AGG | - | Chr5:88300071-88300090 | MsG0580028901.01.T01:intron | 30.0% | |
| CTTACGTGTTATGCATTAAT+AGG | - | Chr5:88301184-88301203 | MsG0580028901.01.T01:intron | 30.0% | |
| CTTACTATAAGACTTCAGTA+GGG | + | Chr5:88300871-88300890 | None:intergenic | 30.0% | |
| GAATTGTATGTACTGTCAAT+AGG | + | Chr5:88300537-88300556 | None:intergenic | 30.0% | |
| TAATGTCATGATCAAGCATA+CGG | - | Chr5:88300448-88300467 | MsG0580028901.01.T01:intron | 30.0% | |
| TCACTATACTAAAGAAAGCA+GGG | - | Chr5:88301292-88301311 | MsG0580028901.01.T01:CDS | 30.0% | |
| TCGAAGAAATGAAGAATCAA+GGG | - | Chr5:88300505-88300524 | MsG0580028901.01.T01:intron | 30.0% | |
| TGAATTACTACATGAGATGA+TGG | - | Chr5:88301224-88301243 | MsG0580028901.01.T01:intron | 30.0% | |
| TTAATGTACGTTACAATGTC+CGG | + | Chr5:88301567-88301586 | None:intergenic | 30.0% | |
| TTCACTATACTAAAGAAAGC+AGG | - | Chr5:88301291-88301310 | MsG0580028901.01.T01:CDS | 30.0% | |
| TTCGAAGAAATGAAGAATCA+AGG | - | Chr5:88300504-88300523 | MsG0580028901.01.T01:intron | 30.0% | |
| TTTACTTGGTATGCATACTT+TGG | - | Chr5:88301404-88301423 | MsG0580028901.01.T01:CDS | 30.0% | |
| TTTGCTGATATGATGAAATC+TGG | - | Chr5:88299878-88299897 | MsG0580028901.01.T01:CDS | 30.0% | |
| ! | ATTAATCTGGTTGGTTGTTA+TGG | - | Chr5:88301582-88301601 | MsG0580028901.01.T01:intron | 30.0% |
| ! | TTTGTGGATTAAGCATATGA+GGG | - | Chr5:88299495-88299514 | MsG0580028901.01.T01:CDS | 30.0% |
| !! | ATCTATCAGAGTATTGTAAG+TGG | + | Chr5:88299816-88299835 | None:intergenic | 30.0% |
| !! | CAAACTTTTTCTGCTGTTAT+TGG | - | Chr5:88300646-88300665 | MsG0580028901.01.T01:intron | 30.0% |
| !! | CAATTTTTCAAAAGTCAGCT+TGG | + | Chr5:88301018-88301037 | None:intergenic | 30.0% |
| !! | GTGTATGGTGCTATAATAAA+CGG | - | Chr5:88300753-88300772 | MsG0580028901.01.T01:intron | 30.0% |
| !! | TTTTGTGGATTAAGCATATG+AGG | - | Chr5:88299494-88299513 | MsG0580028901.01.T01:CDS | 30.0% |
| !!! | TAAGGTTTTGAAGGATGTTT+GGG | - | Chr5:88299562-88299581 | MsG0580028901.01.T01:CDS | 30.0% |
| !!! | TGATCTTGATTTTGATTCGT+CGG | - | Chr5:88299643-88299662 | MsG0580028901.01.T01:intron | 30.0% |
| !!! | TTAAGGTTTTGAAGGATGTT+TGG | - | Chr5:88299561-88299580 | MsG0580028901.01.T01:CDS | 30.0% |
| AAACCAAATGAGGTTGTGTA+TGG | - | Chr5:88300738-88300757 | MsG0580028901.01.T01:intron | 35.0% | |
| AACCATTATGATAAAGCCGT+TGG | - | Chr5:88300478-88300497 | MsG0580028901.01.T01:intron | 35.0% | |
| AATAGGCAATTTCACAAGTG+CGG | - | Chr5:88301201-88301220 | MsG0580028901.01.T01:intron | 35.0% | |
| ACTATCAAAGTTCCATCATC+TGG | + | Chr5:88301267-88301286 | None:intergenic | 35.0% | |
| ACTGCTTTGTACTCTTTACT+TGG | - | Chr5:88301390-88301409 | MsG0580028901.01.T01:CDS | 35.0% | |
| ACTGTTGAAATGCAGGAAAT+GGG | - | Chr5:88300608-88300627 | MsG0580028901.01.T01:intron | 35.0% | |
| ATAGAAGGATTAGAGAGGTT+GGG | - | Chr5:88300086-88300105 | MsG0580028901.01.T01:intron | 35.0% | |
| ATATACATCTTGACAATGCC+AGG | + | Chr5:88300244-88300263 | None:intergenic | 35.0% | |
| ATCTTTATTAGTGGTAGCCA+TGG | - | Chr5:88299934-88299953 | MsG0580028901.01.T01:CDS | 35.0% | |
| CATAATTGCAGCACATACAA+TGG | + | Chr5:88300334-88300353 | None:intergenic | 35.0% | |
| CATTGTATGTGCTGCAATTA+TGG | - | Chr5:88300332-88300351 | MsG0580028901.01.T01:CDS | 35.0% | |
| CCTTACTATAAGACTTCAGT+AGG | + | Chr5:88300872-88300891 | None:intergenic | 35.0% | |
| CGATCTCTCCATATTCTAAT+AGG | + | Chr5:88301647-88301666 | None:intergenic | 35.0% | |
| GCAGAAAAAGTTTGACAATG+TGG | + | Chr5:88300640-88300659 | None:intergenic | 35.0% | |
| GCTAGTTAAAATGGAAGAGA+AGG | - | Chr5:88299980-88299999 | MsG0580028901.01.T01:intron | 35.0% | |
| GTAACGTACATTAATCTGGT+TGG | - | Chr5:88301573-88301592 | MsG0580028901.01.T01:CDS | 35.0% | |
| TATAGAAGGATTAGAGAGGT+TGG | - | Chr5:88300085-88300104 | MsG0580028901.01.T01:intron | 35.0% | |
| TCTAATATGTTGCGATGGAT+AGG | - | Chr5:88299761-88299780 | MsG0580028901.01.T01:CDS | 35.0% | |
| TCTGATAGATTTGTATGGCA+AGG | - | Chr5:88299826-88299845 | MsG0580028901.01.T01:CDS | 35.0% | |
| TGATTTAGTTGACCAAGCAA+GGG | - | Chr5:88300580-88300599 | MsG0580028901.01.T01:intron | 35.0% | |
| ! | ACACGTAAGTACCTTGTTAT+AGG | + | Chr5:88301173-88301192 | None:intergenic | 35.0% |
| ! | ATAAACGGATTTGCAGAACA+TGG | - | Chr5:88300768-88300787 | MsG0580028901.01.T01:intron | 35.0% |
| ! | CCTACTGAAGTCTTATAGTA+AGG | - | Chr5:88300869-88300888 | MsG0580028901.01.T01:CDS | 35.0% |
| ! | CTATGAGTACTGTGTGTTTA+AGG | - | Chr5:88299544-88299563 | MsG0580028901.01.T01:CDS | 35.0% |
| ! | GTTGTTGATTGTTATGGGAA+AGG | - | Chr5:88299451-88299470 | MsG0580028901.01.T01:CDS | 35.0% |
| ! | TAAAGAGTACAAAGCAGTGT+AGG | + | Chr5:88301388-88301407 | None:intergenic | 35.0% |
| !! | CTGTGTGTTTAAGGTTTTGA+AGG | - | Chr5:88299553-88299572 | MsG0580028901.01.T01:CDS | 35.0% |
| ACAGTTAGAGTTGTGTTACC+AGG | - | Chr5:88301335-88301354 | MsG0580028901.01.T01:CDS | 40.0% | |
| ACCAGGAAATGATAAGTGCT+GGG | - | Chr5:88300713-88300732 | MsG0580028901.01.T01:intron | 40.0% | |
| ATAGATTTGTATGGCAAGGC+TGG | - | Chr5:88299830-88299849 | MsG0580028901.01.T01:CDS | 40.0% | |
| ATCCAGATTCTTGCATCAAG+TGG | + | Chr5:88300821-88300840 | None:intergenic | 40.0% | |
| ATGCACAGAGAATATGGTTC+AGG | - | Chr5:88300153-88300172 | MsG0580028901.01.T01:intron | 40.0% | |
| ATTAAGCATATGAGGGTCAG+AGG | - | Chr5:88299502-88299521 | MsG0580028901.01.T01:CDS | 40.0% | |
| CACTGTTGAAATGCAGGAAA+TGG | - | Chr5:88300607-88300626 | MsG0580028901.01.T01:intron | 40.0% | |
| CAGCTTCCAACAAATTTCCA+TGG | + | Chr5:88299954-88299973 | None:intergenic | 40.0% | |
| CGGATTCTAATATGTTGCGA+TGG | - | Chr5:88299756-88299775 | MsG0580028901.01.T01:CDS | 40.0% | |
| CTCTGTAAGTTACAGCATCT+GGG | + | Chr5:88300117-88300136 | None:intergenic | 40.0% | |
| CTGATTTAGTTGACCAAGCA+AGG | - | Chr5:88300579-88300598 | MsG0580028901.01.T01:intron | 40.0% | |
| GCAGAAGAGATGAAAATCTC+AGG | - | Chr5:88301127-88301146 | MsG0580028901.01.T01:intron | 40.0% | |
| GGATGTTTGGGAGTTTGATA+AGG | - | Chr5:88299574-88299593 | MsG0580028901.01.T01:CDS | 40.0% | |
| GTAACTTACAGAGCTCTTCT+CGG | - | Chr5:88300124-88300143 | MsG0580028901.01.T01:intron | 40.0% | |
| GTACTCATAGTAACCTCATC+AGG | + | Chr5:88299534-88299553 | None:intergenic | 40.0% | |
| GTTGATTGTTATGGGAAAGG+TGG | - | Chr5:88299454-88299473 | MsG0580028901.01.T01:CDS | 40.0% | |
| GTTGGTTGTTATGGAAAAGC+TGG | - | Chr5:88301591-88301610 | MsG0580028901.01.T01:intron | 40.0% | |
| TACCAGGAAATGATAAGTGC+TGG | - | Chr5:88300712-88300731 | MsG0580028901.01.T01:intron | 40.0% | |
| TAGAATATGGAGAGATCGAG+CGG | - | Chr5:88301649-88301668 | MsG0580028901.01.T01:intron | 40.0% | |
| TAGAGTTGTGTTACCAGGAA+GGG | - | Chr5:88301340-88301359 | MsG0580028901.01.T01:CDS | 40.0% | |
| TAGATTTGTATGGCAAGGCT+GGG | - | Chr5:88299831-88299850 | MsG0580028901.01.T01:CDS | 40.0% | |
| TCATCTCTTCTGCTATCTGA+TGG | + | Chr5:88301120-88301139 | None:intergenic | 40.0% | |
| TCATTTCTTCGAAGAGCCAA+CGG | + | Chr5:88300497-88300516 | None:intergenic | 40.0% | |
| TCTTGTCTTGTATGCTACTG+CGG | - | Chr5:88300036-88300055 | MsG0580028901.01.T01:intron | 40.0% | |
| TGATGAAATCTGGTGTGCAA+TGG | - | Chr5:88299888-88299907 | MsG0580028901.01.T01:CDS | 40.0% | |
| TGATGCAGTCATTGTATACC+AGG | - | Chr5:88300696-88300715 | MsG0580028901.01.T01:intron | 40.0% | |
| TGCGTAGATTGCCACATTAT+AGG | + | Chr5:88301476-88301495 | None:intergenic | 40.0% | |
| TGCGTTATGCACAGAGAATA+TGG | - | Chr5:88300147-88300166 | MsG0580028901.01.T01:intron | 40.0% | |
| TGGTAGCCATGGAAATTTGT+TGG | - | Chr5:88299945-88299964 | MsG0580028901.01.T01:intron | 40.0% | |
| TTAGAGTTGTGTTACCAGGA+AGG | - | Chr5:88301339-88301358 | MsG0580028901.01.T01:CDS | 40.0% | |
| TTCCACTTGATGCAAGAATC+TGG | - | Chr5:88300816-88300835 | MsG0580028901.01.T01:intron | 40.0% | |
| TTGTTATGGAAAAGCTGGCA+TGG | - | Chr5:88301596-88301615 | MsG0580028901.01.T01:intron | 40.0% | |
| TTTCCTGCATTTCAACAGTG+AGG | + | Chr5:88300607-88300626 | None:intergenic | 40.0% | |
| ! | AAGAAGCTTTTGCCAGATGA+TGG | - | Chr5:88301252-88301271 | MsG0580028901.01.T01:intron | 40.0% |
| ! | AGAACATGGTAGTCTTGATG+AGG | - | Chr5:88300782-88300801 | MsG0580028901.01.T01:intron | 40.0% |
| ! | AGCCAACGGCTTTATCATAA+TGG | + | Chr5:88300483-88300502 | None:intergenic | 40.0% |
| ! | CTGAAGTCTTATAGTAAGGC+AGG | - | Chr5:88300873-88300892 | MsG0580028901.01.T01:CDS | 40.0% |
| ! | TAGGTAGCTTGTGAAGCATA+AGG | + | Chr5:88301369-88301388 | None:intergenic | 40.0% |
| ! | TTGGTAAAGAGGCTCTTTTG+TGG | - | Chr5:88299479-88299498 | MsG0580028901.01.T01:CDS | 40.0% |
| !! | TACCAATGGCTCTAGATTGT+CGG | - | Chr5:88299676-88299695 | MsG0580028901.01.T01:intron | 40.0% |
| !!! | TACCGAGCTTTTTAAGACAG+CGG | - | Chr5:88299726-88299745 | MsG0580028901.01.T01:intron | 40.0% |
| !!! | TCAGAGGTTTTTTCCTGATG+AGG | - | Chr5:88299518-88299537 | MsG0580028901.01.T01:CDS | 40.0% |
| AAGCATAAGGTTTCCCTTCC+TGG | + | Chr5:88301356-88301375 | None:intergenic | 45.0% | |
| AATCTACGCATATGCTCTGC+TGG | - | Chr5:88301486-88301505 | MsG0580028901.01.T01:CDS | 45.0% | |
| ACCCAGCACTTATCATTTCC+TGG | + | Chr5:88300717-88300736 | None:intergenic | 45.0% | |
| ATATGCTCTGCTGGAGATGT+TGG | - | Chr5:88301495-88301514 | MsG0580028901.01.T01:CDS | 45.0% | |
| ATGGTGTGTGCTCGATGAAA+TGG | - | Chr5:88300183-88300202 | MsG0580028901.01.T01:intron | 45.0% | |
| ATTACCGCCTTTGCAGAACT+CGG | - | Chr5:88300979-88300998 | MsG0580028901.01.T01:CDS | 45.0% | |
| ATTGGATGCTATGCTCGTCT+TGG | - | Chr5:88300664-88300683 | MsG0580028901.01.T01:intron | 45.0% | |
| CACAGAGAATATGGTTCAGG+CGG | - | Chr5:88300156-88300175 | MsG0580028901.01.T01:intron | 45.0% | |
| CTCTTCTGCTGCCTATAATG+TGG | - | Chr5:88301462-88301481 | MsG0580028901.01.T01:CDS | 45.0% | |
| CTTGTCTTGTATGCTACTGC+GGG | - | Chr5:88300037-88300056 | MsG0580028901.01.T01:intron | 45.0% | |
| GCACCATACACAACCTCATT+TGG | + | Chr5:88300744-88300763 | None:intergenic | 45.0% | |
| GCAGCACATACAATGGATGA+CGG | + | Chr5:88300327-88300346 | None:intergenic | 45.0% | |
| GCTCTGTAAGTTACAGCATC+TGG | + | Chr5:88300118-88300137 | None:intergenic | 45.0% | |
| GGGAGTTTGATAAGGCTGAT+AGG | - | Chr5:88299582-88299601 | MsG0580028901.01.T01:CDS | 45.0% | |
| GTGCTGGGTTAAACCAAATG+AGG | - | Chr5:88300728-88300747 | MsG0580028901.01.T01:intron | 45.0% | |
| TATGCTCTGCTGGAGATGTT+GGG | - | Chr5:88301496-88301515 | MsG0580028901.01.T01:CDS | 45.0% | |
| TATGGATGCTTTGCCGAGAA+GGG | - | Chr5:88300350-88300369 | MsG0580028901.01.T01:CDS | 45.0% | |
| TGTTATGGGAAAGGTGGTCT+TGG | - | Chr5:88299460-88299479 | MsG0580028901.01.T01:CDS | 45.0% | |
| TTATAGTAAGGCAGGCGACT+TGG | - | Chr5:88300881-88300900 | MsG0580028901.01.T01:CDS | 45.0% | |
| TTATGGATGCTTTGCCGAGA+AGG | - | Chr5:88300349-88300368 | MsG0580028901.01.T01:CDS | 45.0% | |
| TTCAGCCCAAAATCCCTTCT+CGG | + | Chr5:88300366-88300385 | None:intergenic | 45.0% | |
| TTGTCTTGTATGCTACTGCG+GGG | - | Chr5:88300038-88300057 | MsG0580028901.01.T01:intron | 45.0% | |
| ! | CTTTGCCGAGAAGGGATTTT+GGG | - | Chr5:88300358-88300377 | MsG0580028901.01.T01:CDS | 45.0% |
| ! | GAAAGGTGGTCTTGGTAAAG+AGG | - | Chr5:88299468-88299487 | MsG0580028901.01.T01:CDS | 45.0% |
| ! | GTGTGATGGGAAAGTTGACT+TGG | - | Chr5:88299619-88299638 | MsG0580028901.01.T01:CDS | 45.0% |
| ! | GTTGATGAGCATTCTCTTCC+TGG | - | Chr5:88300223-88300242 | MsG0580028901.01.T01:CDS | 45.0% |
| ! | TCGGATTGTGCTACTACCAA+TGG | - | Chr5:88299662-88299681 | MsG0580028901.01.T01:intron | 45.0% |
| ! | TTTAAGACAGCGGGGGAATT+CGG | - | Chr5:88299736-88299755 | MsG0580028901.01.T01:intron | 45.0% |
| !!! | ACCGAGCTTTTTAAGACAGC+GGG | - | Chr5:88299727-88299746 | MsG0580028901.01.T01:intron | 45.0% |
| AACCAAGCCGAGTTCTGCAA+AGG | + | Chr5:88300989-88301008 | None:intergenic | 50.0% | |
| ACAAGCAGAGCAGCAGAACA+TGG | - | Chr5:88300921-88300940 | MsG0580028901.01.T01:CDS | 50.0% | |
| AGACATCGGCATGATTGACG+AGG | - | Chr5:88301094-88301113 | MsG0580028901.01.T01:intron | 50.0% | |
| AGAGAATATGGTTCAGGCGG+TGG | - | Chr5:88300159-88300178 | MsG0580028901.01.T01:intron | 50.0% | |
| AGAGCAGCAGAACATGGAAG+GGG | - | Chr5:88300927-88300946 | MsG0580028901.01.T01:CDS | 50.0% | |
| AGCAGGGTTTCCTGTTGAAG+CGG | - | Chr5:88301308-88301327 | MsG0580028901.01.T01:CDS | 50.0% | |
| AGCGGAGTGATCGTTGTTCA+AGG | - | Chr5:88301667-88301686 | MsG0580028901.01.T01:intron | 50.0% | |
| ATATGGTTCAGGCGGTGGAA+TGG | - | Chr5:88300164-88300183 | MsG0580028901.01.T01:intron | 50.0% | |
| ATTTGTATGGCAAGGCTGGG+CGG | - | Chr5:88299834-88299853 | MsG0580028901.01.T01:CDS | 50.0% | |
| CAGAGCAGCAGAACATGGAA+GGG | - | Chr5:88300926-88300945 | MsG0580028901.01.T01:CDS | 50.0% | |
| CCCCGCTGTCTTAAAAAGCT+CGG | + | Chr5:88299731-88299750 | None:intergenic | 50.0% | |
| GAAAAGAGACAAGGCACGAC+AGG | - | Chr5:88300406-88300425 | MsG0580028901.01.T01:CDS | 50.0% | |
| GGAAAAGCTGGCATGGTTGA+AGG | - | Chr5:88301603-88301622 | MsG0580028901.01.T01:intron | 50.0% | |
| GGACCTCACTGTTGAAATGC+AGG | - | Chr5:88300601-88300620 | MsG0580028901.01.T01:intron | 50.0% | |
| TCTGCTGCTCTGCTTGTAGA+TGG | + | Chr5:88300918-88300937 | None:intergenic | 50.0% | |
| TTGTAAGTGGTAGACAGCCG+AGG | + | Chr5:88299803-88299822 | None:intergenic | 50.0% | |
| ! | AACTGTTCTGCCGCTTCAAC+AGG | + | Chr5:88301321-88301340 | None:intergenic | 50.0% |
| ! | CACCGACAATCTAGAGCCAT+TGG | + | Chr5:88299681-88299700 | None:intergenic | 50.0% |
| ! | GAAGGGATTTTGGGCTGAAG+CGG | - | Chr5:88300367-88300386 | MsG0580028901.01.T01:CDS | 50.0% |
| ! | GCTTTGCCGAGAAGGGATTT+TGG | - | Chr5:88300357-88300376 | MsG0580028901.01.T01:CDS | 50.0% |
| !!! | CCGAGCTTTTTAAGACAGCG+GGG | - | Chr5:88299728-88299747 | MsG0580028901.01.T01:intron | 50.0% |
| !!! | CGAGCTTTTTAAGACAGCGG+GGG | - | Chr5:88299729-88299748 | MsG0580028901.01.T01:intron | 50.0% |
| AGTGGTAGACAGCCGAGGTT+CGG | + | Chr5:88299798-88299817 | None:intergenic | 55.0% | |
| CAACAGTGAGGTCCCTTGCT+TGG | + | Chr5:88300595-88300614 | None:intergenic | 55.0% | |
| CAAGCCGAGTTCTGCAAAGG+CGG | + | Chr5:88300986-88301005 | None:intergenic | 55.0% | |
| CTCTGCTGGAGATGTTGGGA+AGG | - | Chr5:88301500-88301519 | MsG0580028901.01.T01:CDS | 55.0% | |
| GAAGATGCGGGATAAGCACG+TGG | - | Chr5:88301539-88301558 | MsG0580028901.01.T01:CDS | 55.0% | |
| GAGATAGCTCCTCCGAACCT+CGG | - | Chr5:88299783-88299802 | MsG0580028901.01.T01:CDS | 55.0% | |
| GAGCAGCAGAACATGGAAGG+GGG | - | Chr5:88300928-88300947 | MsG0580028901.01.T01:CDS | 55.0% | |
| GCAGAGCAGCAGAACATGGA+AGG | - | Chr5:88300925-88300944 | MsG0580028901.01.T01:CDS | 55.0% | |
| ! | AGTAAGGCAGGCGACTTGGA+AGG | - | Chr5:88300885-88300904 | MsG0580028901.01.T01:CDS | 55.0% |
| ! | GTAAGGCAGGCGACTTGGAA+GGG | - | Chr5:88300886-88300905 | MsG0580028901.01.T01:CDS | 55.0% |
| ! | TAAGGCAGGCGACTTGGAAG+GGG | - | Chr5:88300887-88300906 | MsG0580028901.01.T01:CDS | 55.0% |
| AGACAAGGCACGACAGGCGA+GGG | - | Chr5:88300412-88300431 | MsG0580028901.01.T01:CDS | 60.0% | |
| CGCCTTTGCAGAACTCGGCT+TGG | - | Chr5:88300984-88301003 | MsG0580028901.01.T01:CDS | 60.0% | |
| GCGGGATAAGCACGTGGAAC+CGG | - | Chr5:88301545-88301564 | MsG0580028901.01.T01:CDS | 60.0% | |
| GAGACAAGGCACGACAGGCG+AGG | - | Chr5:88300411-88300430 | MsG0580028901.01.T01:CDS | 65.0% | |
| GGTAGACAGCCGAGGTTCGG+AGG | + | Chr5:88299795-88299814 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 88299422 | 88301740 | 88299422 | ID=MsG0580028901.01;Name=MsG0580028901.01 |
| Chr5 | mRNA | 88299422 | 88301740 | 88299422 | ID=MsG0580028901.01.T01;Parent=MsG0580028901.01;Name=MsG0580028901.01.T01;_AED=0.49;_eAED=0.49;_QI=0|0|0|1|1|1|6|0|436 |
| Chr5 | exon | 88301681 | 88301740 | 88301681 | ID=MsG0580028901.01.T01:exon:25818;Parent=MsG0580028901.01.T01 |
| Chr5 | exon | 88301263 | 88301596 | 88301263 | ID=MsG0580028901.01.T01:exon:25817;Parent=MsG0580028901.01.T01 |
| Chr5 | exon | 88300827 | 88301043 | 88300827 | ID=MsG0580028901.01.T01:exon:25816;Parent=MsG0580028901.01.T01 |
| Chr5 | exon | 88300195 | 88300458 | 88300195 | ID=MsG0580028901.01.T01:exon:25815;Parent=MsG0580028901.01.T01 |
| Chr5 | exon | 88299751 | 88299956 | 88299751 | ID=MsG0580028901.01.T01:exon:25814;Parent=MsG0580028901.01.T01 |
| Chr5 | exon | 88299422 | 88299651 | 88299422 | ID=MsG0580028901.01.T01:exon:25813;Parent=MsG0580028901.01.T01 |
| Chr5 | CDS | 88301681 | 88301740 | 88301681 | ID=MsG0580028901.01.T01:cds;Parent=MsG0580028901.01.T01 |
| Chr5 | CDS | 88301263 | 88301596 | 88301263 | ID=MsG0580028901.01.T01:cds;Parent=MsG0580028901.01.T01 |
| Chr5 | CDS | 88300827 | 88301043 | 88300827 | ID=MsG0580028901.01.T01:cds;Parent=MsG0580028901.01.T01 |
| Chr5 | CDS | 88300195 | 88300458 | 88300195 | ID=MsG0580028901.01.T01:cds;Parent=MsG0580028901.01.T01 |
| Chr5 | CDS | 88299751 | 88299956 | 88299751 | ID=MsG0580028901.01.T01:cds;Parent=MsG0580028901.01.T01 |
| Chr5 | CDS | 88299422 | 88299651 | 88299422 | ID=MsG0580028901.01.T01:cds;Parent=MsG0580028901.01.T01 |
| Gene Sequence |
| Protein sequence |
