AlfalfaGEDB | MsG0180000544.01

M. sativa cultivar ZhongmuNo.1 / MsG0180000544.01

KEGG: K22503
GO: GO:0000166 GO:0004812 GO:0005524 GO:0006418
PFAM: PF00152

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000544.01.T02	XP_003588866.1	92.945	326	11	2	1	326	110	423	0	609
MsG0180000544.01.T01	XP_003588866.1	93.639	393	13	2	90	482	43	423	0	741

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000544.01.T01	Q9M084	59.852	406	136	5	90	482	49	440	2.11E-168	489
MsG0180000544.01.T02	Q9M084	65.35	329	97	3	1	326	126	440	1.17E-155	450

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000544.01.T01	G7I885	93.639	393	13	2	90	482	43	423	0.0	739
MsG0180000544.01.T02	G7I885	92.945	326	11	2	1	326	110	423	0.0	609

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047791.01	MsG0180000544.01	-0.807709	4.427668e-50	2.483555e-47
MsG0080048817.01	MsG0180000544.01	-0.815037	1.134868e-51	7.739095e-49
MsG0080049011.01	MsG0180000544.01	-0.804272	2.339696e-49	1.201172e-46
MsG0080049069.01	MsG0180000544.01	-0.847676	9.945007e-60	1.781314e-56
MsG0180000544.01	MsG0180003124.01	-0.814840	1.255072e-51	8.513126e-49
MsG0180000544.01	MsG0180003189.01	-0.804781	1.831735e-49	9.528896e-47
MsG0180000544.01	MsG0180003246.01	0.826228	3.044349e-54	2.837997e-51
MsG0180000544.01	MsG0180003767.01	0.814180	1.756976e-51	1.170681e-48
MsG0180000544.01	MsG0180003952.01	-0.810872	9.285231e-51	5.662499e-48
MsG0180000544.01	MsG0180005881.01	0.829912	3.947895e-55	4.096969e-52
MsG0180000544.01	MsG0180006034.01	0.830757	2.453852e-55	2.609724e-52
MsG0180000544.01	MsG0180006144.01	-0.823375	1.432854e-53	1.231421e-50
MsG0180000544.01	MsG0180006220.01	-0.804445	2.152525e-49	1.110038e-46
MsG0180000544.01	MsG0280006306.01	0.867823	1.030360e-65	3.646252e-62
MsG0180000544.01	MsG0280006418.01	0.820107	8.169363e-53	6.405918e-50
MsG0180000544.01	MsG0280007062.01	-0.804611	1.987951e-49	1.029573e-46
MsG0180000544.01	MsG0280007193.01	0.875221	3.656683e-68	1.694233e-64
MsG0180000544.01	MsG0280007723.01	0.809583	1.761525e-50	1.038280e-47
MsG0180000544.01	MsG0280008660.01	0.815763	7.825976e-52	5.444180e-49
MsG0180000544.01	MsG0280008928.01	-0.836842	7.381018e-57	9.415390e-54
MsG0180000544.01	MsG0280008929.01	-0.813780	2.151845e-51	1.418316e-48
MsG0180000544.01	MsG0280010288.01	-0.828184	1.035410e-54	1.021577e-51
MsG0180000544.01	MsG0280010532.01	0.809081	2.256342e-50	1.312204e-47
MsG0180000544.01	MsG0280010604.01	0.851559	8.201333e-61	1.666495e-57
MsG0180000544.01	MsG0280011059.01	0.878986	1.800209e-69	9.595292e-66
MsG0180000544.01	MsG0380012005.01	-0.803144	4.010382e-49	2.000104e-46
MsG0180000544.01	MsG0380013467.01	-0.806228	9.110444e-50	4.918646e-47
MsG0180000544.01	MsG0380014225.01	0.837554	4.853961e-57	6.327710e-54
MsG0180000544.01	MsG0380014401.01	0.831520	1.593498e-55	1.733480e-52
MsG0180000544.01	MsG0380015066.01	0.816486	5.395425e-52	3.827904e-49
MsG0180000544.01	MsG0380015166.01	-0.810024	1.415774e-50	8.442486e-48
MsG0180000544.01	MsG0380015212.01	0.823279	1.508564e-53	1.293094e-50
MsG0180000544.01	MsG0380015466.01	-0.803853	2.858428e-49	1.451891e-46
MsG0180000544.01	MsG0380015849.01	0.840078	1.079760e-57	1.521116e-54
MsG0180000544.01	MsG0380016191.01	0.850242	1.927560e-60	3.751881e-57
MsG0180000544.01	MsG0380016347.01	0.837141	6.192577e-57	7.970819e-54
MsG0180000544.01	MsG0380016547.01	0.805911	1.061840e-49	5.686540e-47
MsG0180000544.01	MsG0380016828.01	0.856034	4.225673e-62	9.951083e-59
MsG0180000544.01	MsG0380017023.01	-0.816734	4.746656e-52	3.390727e-49
MsG0180000544.01	MsG0380017085.01	-0.826616	2.460762e-54	2.319417e-51
MsG0180000544.01	MsG0380017198.01	-0.814110	1.819940e-51	1.210342e-48
MsG0180000544.01	MsG0380017263.01	0.843373	1.458604e-58	2.277569e-55
MsG0180000544.01	MsG0380017776.01	0.843388	1.445117e-58	2.257641e-55
MsG0180000544.01	MsG0380017878.01	0.863811	1.906629e-64	5.856025e-61
MsG0180000544.01	MsG0380017891.01	0.888426	5.967211e-73	4.620411e-69
MsG0180000544.01	MsG0480018091.01	0.800333	1.513764e-48	7.029952e-46
MsG0180000544.01	MsG0480018214.01	-0.818789	1.631496e-52	1.233138e-49
MsG0180000544.01	MsG0480018911.01	-0.814862	1.241204e-51	8.423763e-49
MsG0180000544.01	MsG0480019126.01	-0.802791	4.743205e-49	2.344569e-46
MsG0180000544.01	MsG0480019163.01	0.827215	1.769204e-54	1.696961e-51
MsG0180000544.01	MsG0480019689.01	0.820371	7.105301e-53	5.611800e-50
MsG0180000544.01	MsG0480020025.01	-0.818388	2.011809e-52	1.503937e-49
MsG0180000544.01	MsG0480021201.01	-0.808194	3.492011e-50	1.983912e-47
MsG0180000544.01	MsG0480021280.01	-0.804681	1.921862e-49	9.971745e-47
MsG0180000544.01	MsG0480021776.01	0.899984	1.152489e-77	1.459537e-73
MsG0180000544.01	MsG0480021836.01	0.812690	3.734750e-51	2.390473e-48
MsG0180000544.01	MsG0480021845.01	0.808895	2.473459e-50	1.431233e-47
MsG0180000544.01	MsG0480021869.01	-0.806400	8.378770e-50	4.543221e-47
MsG0180000544.01	MsG0480021959.01	-0.806668	7.354923e-50	4.015353e-47
MsG0180000544.01	MsG0480022340.01	0.822718	2.039485e-53	1.720718e-50
MsG0180000544.01	MsG0480022872.01	0.850911	1.250419e-60	2.487553e-57
MsG0180000544.01	MsG0480022956.01	0.860018	2.767399e-63	7.456725e-60
MsG0180000544.01	MsG0480023162.01	-0.803198	3.908364e-49	1.951982e-46
MsG0180000544.01	MsG0480023660.01	-0.818626	1.777255e-52	1.337182e-49
MsG0180000544.01	MsG0580024495.01	-0.810406	1.170907e-50	7.051830e-48
MsG0180000544.01	MsG0580025182.01	0.856314	3.499260e-62	8.317051e-59
MsG0180000544.01	MsG0580025369.01	0.802759	4.816961e-49	2.379001e-46
MsG0180000544.01	MsG0580025467.01	-0.820996	5.104182e-53	4.102329e-50
MsG0180000544.01	MsG0580025756.01	-0.802037	6.783295e-49	3.289016e-46
MsG0180000544.01	MsG0580027103.01	-0.800481	1.412518e-48	6.584090e-46
MsG0180000544.01	MsG0580028630.01	-0.810281	1.246020e-50	7.479525e-48
MsG0180000544.01	MsG0580029514.01	0.849210	3.742049e-60	7.043297e-57
MsG0180000544.01	MsG0580029549.01	-0.812681	3.751377e-51	2.400487e-48
MsG0180000544.01	MsG0580029717.01	-0.823173	1.597370e-53	1.365137e-50
MsG0180000544.01	MsG0580029879.01	-0.803128	4.041240e-49	2.014635e-46
MsG0180000544.01	MsG0580029924.01	-0.813573	2.391032e-51	1.567158e-48
MsG0180000544.01	MsG0580029925.01	-0.802661	5.047512e-49	2.486497e-46
MsG0180000544.01	MsG0580029999.01	0.831364	1.740980e-55	1.885085e-52
MsG0180000544.01	MsG0680030555.01	-0.803279	3.761090e-49	1.882271e-46
MsG0180000544.01	MsG0680031333.01	0.828317	9.614511e-55	9.522407e-52
MsG0180000544.01	MsG0680031334.01	-0.804539	2.058349e-49	1.064007e-46
MsG0180000544.01	MsG0680032473.01	0.810156	1.326122e-50	7.934615e-48
MsG0180000544.01	MsG0680032510.01	0.803594	3.235816e-49	1.632656e-46
MsG0180000544.01	MsG0680033625.01	0.896170	4.767403e-76	5.098255e-72
MsG0180000544.01	MsG0680035311.01	0.828742	7.591972e-55	7.612402e-52
MsG0180000544.01	MsG0780035957.01	-0.801560	8.500353e-49	4.071893e-46
MsG0180000544.01	MsG0780036978.01	-0.811933	5.464360e-51	3.426923e-48
MsG0180000544.01	MsG0780037082.01	-0.844860	5.819622e-59	9.520729e-56
MsG0180000544.01	MsG0780038309.01	0.866955	1.952658e-65	6.702432e-62
MsG0180000544.01	MsG0780038473.01	0.833059	6.628057e-56	7.547327e-53
MsG0180000544.01	MsG0780039143.01	-0.800284	1.549019e-48	7.184738e-46
MsG0180000544.01	MsG0780039867.01	0.829269	5.656806e-55	5.761820e-52
MsG0180000544.01	MsG0780040148.01	0.840776	7.093619e-58	1.021095e-54
MsG0180000544.01	MsG0780040566.01	0.858861	6.157259e-63	1.594291e-59
MsG0180000544.01	MsG0780040576.01	0.808973	2.380100e-50	1.380141e-47
MsG0180000544.01	MsG0780040596.01	-0.802536	5.354633e-49	2.629528e-46
MsG0180000544.01	MsG0780041117.01	0.865715	4.827940e-65	1.586392e-61
MsG0180000544.01	MsG0780041470.01	0.825861	3.720551e-54	3.432611e-51
MsG0180000544.01	MsG0780041507.01	-0.812051	5.148988e-51	3.239627e-48
MsG0180000544.01	MsG0780041747.01	-0.806981	6.315262e-50	3.476015e-47
MsG0180000544.01	MsG0880042134.01	-0.807925	3.982462e-50	2.246427e-47
MsG0180000544.01	MsG0880042987.01	0.866874	2.071648e-65	7.091386e-62
MsG0180000544.01	MsG0880043905.01	-0.813709	2.231524e-51	1.468069e-48
MsG0180000544.01	MsG0880044394.01	-0.806694	7.265388e-50	3.969217e-47
MsG0180000544.01	MsG0880044611.01	0.822471	2.327688e-53	1.950112e-50
MsG0180000544.01	MsG0880045010.01	0.812221	4.727588e-51	2.988514e-48
MsG0180000544.01	MsG0880045555.01	0.810530	1.101069e-50	6.653120e-48
MsG0180000544.01	MsG0880045605.01	0.851072	1.126188e-60	2.252288e-57
MsG0180000544.01	MsG0880046126.01	-0.805643	1.208812e-49	6.429158e-47
MsG0180000544.01	MsG0880046384.01	0.811699	6.144878e-51	3.829743e-48
MsG0180000544.01	MsG0880046620.01	-0.836774	7.684300e-57	9.782531e-54
MsG0180000544.01	MsG0880046825.01	0.855031	8.283396e-62	1.886640e-58
MsG0180000544.01	MsG0880046930.01	-0.821730	3.456754e-53	2.835403e-50
MsG0180000544.01	MsG0880046963.01	0.849278	3.582450e-60	6.756875e-57
MsG0180000544.01	MsG0880047045.01	-0.800851	1.187040e-48	5.585643e-46
MsG0180000544.01	MsG0880047052.01	-0.804252	2.361264e-49	1.211621e-46
MsG0180000544.01	MsG0880047689.01	0.807085	6.004028e-50	3.313490e-47
MsG0180000544.01	MsG0880047763.01	-0.854508	1.174900e-61	2.630124e-58

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000544.01.T02	MTR_1g014140	92.945	326	11	2	1	326	110	423	0.0	609
MsG0180000544.01.T02	MTR_5g028360	72.973	333	68	3	1	326	154	471	1.50e-169	484
MsG0180000544.01.T01	MTR_1g014140	93.639	393	13	2	90	482	43	423	0.0	741
MsG0180000544.01.T01	MTR_5g028360	66.427	417	100	5	76	482	85	471	0.0	530

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0180000544.01.T02	AT4G31180	65.350	329	97	3	1	326	126	440	1.19e-156	450
MsG0180000544.01.T02	AT4G31180	65.350	329	97	3	1	326	126	440	1.19e-156	450
MsG0180000544.01.T02	AT4G26870	64.198	324	102	3	3	326	105	414	2.66e-147	425
MsG0180000544.01.T01	AT4G31180	59.852	406	136	5	90	482	49	440	2.15e-169	489
MsG0180000544.01.T01	AT4G31180	59.852	406	136	5	90	482	49	440	2.15e-169	489
MsG0180000544.01.T01	AT4G26870	59.542	393	142	5	90	482	39	414	8.86e-157	456

Find 16 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTCTATCCTGAGTTTGGGC+TGG	0.346815	1:-7649544	None:intergenic
GTAAGCGTGAGGGTAAAATA+AGG	0.399760	1:+7649496	None:intergenic
TTCTATCCTGAGTTTGGGCT+GGG	0.403019	1:-7649543	None:intergenic
GATTTGAAGAAGAACGAGAT+TGG	0.431028	1:+7647934	None:intergenic
ATGAGAGTTTCGGAGAAATG+AGG	0.462622	1:+7648004	None:intergenic
CAACAGAGAAAACGAGAAAG+AGG	0.472805	1:+7649456	None:intergenic
TTCTTCTCTGCGATTCATCA+AGG	0.506469	1:-7649421	MsG0180000544.01.T01:intron
TGAGAGTTTCGGAGAAATGA+GGG	0.508206	1:+7648005	None:intergenic
AAGAAGAACGAGATTGGAGA+TGG	0.527588	1:+7647940	None:intergenic
GGAGTGAGTGATGAGAGTTT+CGG	0.536508	1:+7647994	None:intergenic
AAAATAAGGATTCAGCGGAT+AGG	0.586415	1:+7649510	None:intergenic
GAGAAAACGAGAAAGAGGAG+TGG	0.619349	1:+7649461	None:intergenic
AGAGCGTGAGAGTAAGCGTG+AGG	0.637856	1:+7649485	None:intergenic
AGGGTAAAATAAGGATTCAG+CGG	0.643934	1:+7649505	None:intergenic
GAGCGTGAGAGTAAGCGTGA+GGG	0.674608	1:+7649486	None:intergenic
ACGAGATTGGAGATGGTGTG+TGG	0.706722	1:+7647947	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATTAAACAGAAAAAAAAA+TGG	+	Chr1:7644554-7644573	None:intergenic	10.0%
!!	AATTTATCAATTCTATTCAA+TGG	+	Chr1:7644872-7644891	None:intergenic	15.0%
!!	AGAATAATATTAGAGAAAAT+AGG	+	Chr1:7647861-7647880	None:intergenic	15.0%
!!	ATTATATAAATGTCATTGAA+AGG	-	Chr1:7648971-7648990	MsG0180000544.01.T01:intron	15.0%
!!	ATTCTTAAAGAATCTAAAAA+TGG	+	Chr1:7646258-7646277	None:intergenic	15.0%
!!	TAAATTTAATGTAATGACTT+TGG	-	Chr1:7646087-7646106	MsG0180000544.01.T01:intron	15.0%
!!	TAACTATGATATATATAAGA+TGG	-	Chr1:7649383-7649402	MsG0180000544.01.T01:intron	15.0%
!!	TTTCAATTTAATTCAAGAAA+AGG	-	Chr1:7649194-7649213	MsG0180000544.01.T01:intron	15.0%
!!	TTTCTTGAATTAAATTGAAA+AGG	+	Chr1:7649194-7649213	None:intergenic	15.0%
!!	TTTGTTAAGAATGAATAATA+TGG	+	Chr1:7644742-7644761	None:intergenic	15.0%
!!!	ATTTTTTTCTCTTTCATATT+TGG	-	Chr1:7644508-7644527	MsG0180000544.01.T01:intron	15.0%
!!!	CAATGATTTTTTTTTTGTTA+AGG	-	Chr1:7644671-7644690	MsG0180000544.01.T01:intron	15.0%
!!!	GATTTTGATTTTGATTATAA+TGG	-	Chr1:7647361-7647380	MsG0180000544.01.T01:intron	15.0%
!!!	TGAGTTTAATTTATCATATA+TGG	+	Chr1:7646680-7646699	None:intergenic	15.0%
!!!	TTTGATTGAAAATTTTACAA+TGG	-	Chr1:7646194-7646213	MsG0180000544.01.T01:intron	15.0%
!!	AAATTGATGAAAATGTACTT+GGG	-	Chr1:7649013-7649032	MsG0180000544.01.T01:intron	20.0%
!!	AACCAAATAATTGTTACTAT+TGG	-	Chr1:7649164-7649183	MsG0180000544.01.T01:intron	20.0%
!!	AAGAACAAGAAATTGAATAA+AGG	+	Chr1:7644610-7644629	None:intergenic	20.0%
!!	AATAGTAACAATTATTTGGT+TGG	+	Chr1:7649165-7649184	None:intergenic	20.0%
!!	AATGAATATATATACCTGAA+TGG	+	Chr1:7647515-7647534	None:intergenic	20.0%
!!	ACCAAATAATTGTTACTATT+GGG	-	Chr1:7649165-7649184	MsG0180000544.01.T01:intron	20.0%
!!	ATAATATGGAATGTAAATTG+TGG	+	Chr1:7644728-7644747	None:intergenic	20.0%
!!	CATTGAAACAATTGATAAAA+AGG	-	Chr1:7644901-7644920	MsG0180000544.01.T01:intron	20.0%
!!	CGTGATGTTATATATAATAT+TGG	-	Chr1:7645266-7645285	MsG0180000544.01.T01:intron	20.0%
!!	TAAATTGATGAAAATGTACT+TGG	-	Chr1:7649012-7649031	MsG0180000544.01.T01:intron	20.0%
!!	TAAGTACTTGAAAATTTACT+TGG	-	Chr1:7646552-7646571	MsG0180000544.01.T01:CDS	20.0%
!!	TCAATTACAACATTTCTAAT+CGG	+	Chr1:7647539-7647558	None:intergenic	20.0%
!!	TGCAATATACTAATATTAGA+CGG	-	Chr1:7648580-7648599	MsG0180000544.01.T01:intron	20.0%
!!	TTCAATTATTTGTTTGTAGT+GGG	-	Chr1:7648540-7648559	MsG0180000544.01.T01:intron	20.0%
!!	TTCTTGAAGAAACTAAAAAT+TGG	+	Chr1:7645989-7646008	None:intergenic	20.0%
!!	TTGAAGAAAAAAAATGCAAT+GGG	-	Chr1:7646509-7646528	MsG0180000544.01.T01:intron	20.0%
!!	TTGTTCTCTTAATATGAAAA+CGG	-	Chr1:7645016-7645035	MsG0180000544.01.T01:intron	20.0%
!!	TTTGAAGAAAAAAAATGCAA+TGG	-	Chr1:7646508-7646527	MsG0180000544.01.T01:intron	20.0%
!!!	ATTAAGTTGAGATCAATTTT+TGG	-	Chr1:7646579-7646598	MsG0180000544.01.T01:CDS	20.0%
!!!	CATTTCTTAAGTTAGTTTAT+CGG	+	Chr1:7647945-7647964	None:intergenic	20.0%
!!!	CTTTTATCAATTCTATTCAA+TGG	+	Chr1:7644956-7644975	None:intergenic	20.0%
!!!	GTTGTATTTTTTCGTTTATT+GGG	-	Chr1:7646109-7646128	MsG0180000544.01.T01:intron	20.0%
!!!	TCAATACATGTTTCTTTTAT+AGG	-	Chr1:7645209-7645228	MsG0180000544.01.T01:intron	20.0%
!!!	TCAATTTTACAAAATAGACA+GGG	+	Chr1:7648816-7648835	None:intergenic	20.0%
!!!	TGTCTATTTTGTAAAATTGA+GGG	-	Chr1:7648816-7648835	MsG0180000544.01.T01:intron	20.0%
!!!	TGTTGTTTTGTTTAATATAC+TGG	-	Chr1:7647665-7647684	MsG0180000544.01.T01:intron	20.0%
!!!	TTTCTTGTTCTTTTTGAATT+TGG	-	Chr1:7644618-7644637	MsG0180000544.01.T01:intron	20.0%
!	AAACAAATTAACACCTTTAG+GGG	+	Chr1:7648483-7648502	None:intergenic	25.0%
!	ACATTATTATGAGGTACATT+TGG	-	Chr1:7648272-7648291	MsG0180000544.01.T01:intron	25.0%
!	AGGACATATAGTTATTTGAT+TGG	-	Chr1:7649214-7649233	MsG0180000544.01.T01:intron	25.0%
!	AGGATTAGGGAAAATATAAA+AGG	+	Chr1:7644426-7644445	None:intergenic	25.0%
!	ATGATTAGTACCAAAAATGA+TGG	+	Chr1:7646637-7646656	None:intergenic	25.0%
!	CAAACAAATTAACACCTTTA+GGG	+	Chr1:7648484-7648503	None:intergenic	25.0%
!	CCAAATAATTGTTACTATTG+GGG	-	Chr1:7649166-7649185	MsG0180000544.01.T01:intron	25.0%
!	CTTAAAGAATCTAAAAATGG+AGG	+	Chr1:7646255-7646274	None:intergenic	25.0%
!	GATAAACAAACAAATGTGAT+AGG	-	Chr1:7648753-7648772	MsG0180000544.01.T01:intron	25.0%
!	GTTCAATTATTTGTTTGTAG+TGG	-	Chr1:7648539-7648558	MsG0180000544.01.T01:intron	25.0%
!	TAATTAGTGATTACTCTCTA+TGG	-	Chr1:7645051-7645070	MsG0180000544.01.T01:intron	25.0%
!	TATAAGATTAAACTGTACAC+AGG	+	Chr1:7648871-7648890	None:intergenic	25.0%
!	TGAAAGAGAAAAAAATTCCA+TGG	+	Chr1:7644504-7644523	None:intergenic	25.0%
!	TGAAGAAAAAAAATGCAATG+GGG	-	Chr1:7646510-7646529	MsG0180000544.01.T01:intron	25.0%
!	TTGGTACTAATGTAATTTGA+TGG	-	Chr1:7646598-7646617	MsG0180000544.01.T01:CDS	25.0%
!	TTTAAACTTCACTACAAGAT+TGG	+	Chr1:7648921-7648940	None:intergenic	25.0%
!	TTTAGTCATTTCATTGATGA+TGG	-	Chr1:7649092-7649111	MsG0180000544.01.T01:intron	25.0%
!	TTTGAACACAAAATGTAAGA+AGG	-	Chr1:7648422-7648441	MsG0180000544.01.T01:intron	25.0%
!!	AAAATTTTACACTGATGTTG+TGG	-	Chr1:7646484-7646503	MsG0180000544.01.T01:intron	25.0%
!!	AACTTAAGAAATGCATTTTG+CGG	-	Chr1:7647952-7647971	MsG0180000544.01.T01:intron	25.0%
!!	ACTGATACTTTTGTGTTTTT+TGG	-	Chr1:7648352-7648371	MsG0180000544.01.T01:intron	25.0%
!!	AGATCTTTTCGTTTATTATG+TGG	-	Chr1:7645483-7645502	MsG0180000544.01.T01:intron	25.0%
!!	CTAAATGAGATCTCATTTTA+TGG	+	Chr1:7649077-7649096	None:intergenic	25.0%
!!	CTCAATTTTACAAAATAGAC+AGG	+	Chr1:7648817-7648836	None:intergenic	25.0%
!!	CTGTCTATTTTGTAAAATTG+AGG	-	Chr1:7648815-7648834	MsG0180000544.01.T01:intron	25.0%
!!	GATTATCTAACCATCATTTT+TGG	-	Chr1:7646624-7646643	MsG0180000544.01.T01:CDS	25.0%
!!	GGTATTTGTTAAAAGGATTT+AGG	-	Chr1:7646367-7646386	MsG0180000544.01.T01:CDS	25.0%
!!	GTCTATTTTGTAAAATTGAG+GGG	-	Chr1:7648817-7648836	MsG0180000544.01.T01:intron	25.0%
!!	GTTATGATATCTTGTTACTT+AGG	-	Chr1:7647283-7647302	MsG0180000544.01.T01:intron	25.0%
!!	GTTGTATTTGTTAGCTTAAT+GGG	-	Chr1:7646389-7646408	MsG0180000544.01.T01:CDS	25.0%
!!	TGGAATTTTCAAAAATTGGA+GGG	+	Chr1:7649145-7649164	None:intergenic	25.0%
!!	TGGTTGGAATTTTCAAAAAT+TGG	+	Chr1:7649149-7649168	None:intergenic	25.0%
!!	TTCTCTTTCATATTTGGTTT+AGG	-	Chr1:7644514-7644533	MsG0180000544.01.T01:intron	25.0%
!!	TTGGAATTTTCAAAAATTGG+AGG	+	Chr1:7649146-7649165	None:intergenic	25.0%
!!!	AATAAGTATTGAAGAACAAC+TGG	-	Chr1:7645545-7645564	MsG0180000544.01.T01:CDS	25.0%
!!!	ATTGATAAAAGTACTCTCTA+TGG	-	Chr1:7644965-7644984	MsG0180000544.01.T01:intron	25.0%
!!!	CTAAAGGTGTTAATTTGTTT+GGG	-	Chr1:7648483-7648502	MsG0180000544.01.T01:intron	25.0%
!!!	CTAATTCAATTGTGTTTTGA+TGG	-	Chr1:7645092-7645111	MsG0180000544.01.T01:intron	25.0%
!!!	GGTTGTATTTTTTCGTTTAT+TGG	-	Chr1:7646108-7646127	MsG0180000544.01.T01:intron	25.0%
!!!	GTTGATGGTGATTTTTTAAT+TGG	-	Chr1:7647710-7647729	MsG0180000544.01.T01:intron	25.0%
!!!	TGTTTTGATGGAAGAAAAAA+AGG	-	Chr1:7645104-7645123	MsG0180000544.01.T01:intron	25.0%
!!!	TTGATTATAATGGTGTTATG+TGG	-	Chr1:7647371-7647390	MsG0180000544.01.T01:intron	25.0%
	AAAAACATTTCGACATACTC+AGG	+	Chr1:7645697-7645716	None:intergenic	30.0%
	AAAACATTTCGACATACTCA+GGG	+	Chr1:7645696-7645715	None:intergenic	30.0%
	AAATTCAAAGAACACCACTT+AGG	+	Chr1:7646161-7646180	None:intergenic	30.0%
	AAGTGAAGTTGAAATTGAGA+AGG	-	Chr1:7647489-7647508	MsG0180000544.01.T01:intron	30.0%
	AATACCATAATTGACAGCAA+GGG	+	Chr1:7646938-7646957	None:intergenic	30.0%
	ACACACATCTTTAATCAGAA+AGG	+	Chr1:7647641-7647660	None:intergenic	30.0%
	ACATTTATCAAACACCTAGT+AGG	+	Chr1:7646138-7646157	None:intergenic	30.0%
	ATATGGAATGTAAATTGTGG+AGG	+	Chr1:7644725-7644744	None:intergenic	30.0%
	ATCAGAAACAGAAAGCAAAA+AGG	-	Chr1:7646817-7646836	MsG0180000544.01.T01:CDS	30.0%
	ATCCTGAATATAATTCCTCT+TGG	+	Chr1:7644784-7644803	None:intergenic	30.0%
	CAAGTTAGTGACACTTATTT+AGG	-	Chr1:7649241-7649260	MsG0180000544.01.T01:intron	30.0%
	CCAAACAAATTAACACCTTT+AGG	+	Chr1:7648485-7648504	None:intergenic	30.0%
	CCCCAATAGTAACAATTATT+TGG	+	Chr1:7649169-7649188	None:intergenic	30.0%
	TACCATTTGAGCACAAAAAA+CGG	+	Chr1:7646284-7646303	None:intergenic	30.0%
	TACTCTCTATGGACAATTAT+TGG	-	Chr1:7645062-7645081	MsG0180000544.01.T01:intron	30.0%
	TGTTTGATAAATGTCCTAAG+TGG	-	Chr1:7646144-7646163	MsG0180000544.01.T01:intron	30.0%
	TTATGAGTCATTCTTCGATA+TGG	-	Chr1:7645337-7645356	MsG0180000544.01.T01:CDS	30.0%
	TTCTTAGTCATCAGAGAAAA+TGG	-	Chr1:7647105-7647124	MsG0180000544.01.T01:intron	30.0%
	TTTACATCAAGACTCAGAAA+AGG	-	Chr1:7649347-7649366	MsG0180000544.01.T01:intron	30.0%
	TTTGTGAGTTGTGATTGTTT+AGG	-	Chr1:7647339-7647358	MsG0180000544.01.T01:intron	30.0%
!	AAATTGGTTTCTACCAATAG+AGG	+	Chr1:7645973-7645992	None:intergenic	30.0%
!	AATTTCAAGCTTTTACACCA+TGG	-	Chr1:7644484-7644503	MsG0180000544.01.T01:intron	30.0%
!	ATGTCAATATGTGGTGATTT+TGG	-	Chr1:7648147-7648166	MsG0180000544.01.T01:intron	30.0%
!	CATTCTAAGAATCGTGTTAT+TGG	-	Chr1:7645594-7645613	MsG0180000544.01.T01:CDS	30.0%
!	CTTATTTAGGTTCCTAACTA+TGG	-	Chr1:7649254-7649273	MsG0180000544.01.T01:intron	30.0%
!	GGTTGTATTTGTTAGCTTAA+TGG	-	Chr1:7646388-7646407	MsG0180000544.01.T01:CDS	30.0%
!	GTTTTCTCACATTGTTTGTT+TGG	-	Chr1:7646737-7646756	MsG0180000544.01.T01:CDS	30.0%
!	TATTTTGTAAAATTGAGGGG+TGG	-	Chr1:7648820-7648839	MsG0180000544.01.T01:intron	30.0%
!	TCTTAAGTTAGTTTATCGGT+AGG	+	Chr1:7647941-7647960	None:intergenic	30.0%
!	TGAATCTTGTTTCTTGAGTT+TGG	-	Chr1:7646315-7646334	MsG0180000544.01.T01:CDS	30.0%
!	TGGACAATTGTTTCTTTCTT+TGG	-	Chr1:7644985-7645004	MsG0180000544.01.T01:intron	30.0%
!	TGTTTGTTAAGTGTTCTAAG+TGG	-	Chr1:7646424-7646443	MsG0180000544.01.T01:intron	30.0%
!!	ATACTTTTGTGTTTTTTGGC+AGG	-	Chr1:7648356-7648375	MsG0180000544.01.T01:intron	30.0%
!!	CCTAAAGGTGTTAATTTGTT+TGG	-	Chr1:7648482-7648501	MsG0180000544.01.T01:intron	30.0%
!!	TTCATTGATGATGGTAGTTT+GGG	-	Chr1:7649101-7649120	MsG0180000544.01.T01:intron	30.0%
!!	TTTCATTGATGATGGTAGTT+TGG	-	Chr1:7649100-7649119	MsG0180000544.01.T01:intron	30.0%
!!	TTTCCTCTTGTAGTTAGTTT+TGG	-	Chr1:7649298-7649317	MsG0180000544.01.T01:intron	30.0%
!!!	TATGTGGTTTTGTTCTCTAT+AGG	-	Chr1:7647387-7647406	MsG0180000544.01.T01:intron	30.0%
!!!	TTCCTCTTGTAGTTAGTTTT+GGG	-	Chr1:7649299-7649318	MsG0180000544.01.T01:intron	30.0%
	AAAATAAGGATTCAGCGGAT+AGG	+	Chr1:7644291-7644310	None:intergenic	35.0%
	AACACTTAACAAACACCTAG+AGG	+	Chr1:7646419-7646438	None:intergenic	35.0%
	AAGTGGAGAAAAGAGGATTA+GGG	+	Chr1:7644439-7644458	None:intergenic	35.0%
	ACACTTAACAAACACCTAGA+GGG	+	Chr1:7646418-7646437	None:intergenic	35.0%
	ACTTGAATACTGAAGCAGAA+AGG	-	Chr1:7649503-7649522	MsG0180000544.01.T01:CDS	35.0%
	AGCCAAGAGGAATTATATTC+AGG	-	Chr1:7644779-7644798	MsG0180000544.01.T01:intron	35.0%
	AGGGTAAAATAAGGATTCAG+CGG	+	Chr1:7644296-7644315	None:intergenic	35.0%
	AGTATCTTCCAAATACTCTG+CGG	-	Chr1:7648655-7648674	MsG0180000544.01.T01:intron	35.0%
	ATAATTCAAGCTCAGCAAGA+GGG	-	Chr1:7646704-7646723	MsG0180000544.01.T01:CDS	35.0%
	ATACCATAATTGACAGCAAG+GGG	+	Chr1:7646937-7646956	None:intergenic	35.0%
	ATGTGTTAATCAACTTCGCA+TGG	-	Chr1:7645455-7645474	MsG0180000544.01.T01:intron	35.0%
	CAAATGTGATAGGATGATGA+TGG	-	Chr1:7648763-7648782	MsG0180000544.01.T01:intron	35.0%
	CAATACCATAATTGACAGCA+AGG	+	Chr1:7646939-7646958	None:intergenic	35.0%
	CACAAGCAAATGTCAATATG+TGG	-	Chr1:7648138-7648157	MsG0180000544.01.T01:intron	35.0%
	CACATATGACATCATTTCGT+TGG	+	Chr1:7645440-7645459	None:intergenic	35.0%
	CACCATCAACATTCATGTAA+GGG	+	Chr1:7647700-7647719	None:intergenic	35.0%
	CAGAAGATTCCTTTACTCAT+AGG	-	Chr1:7648202-7648221	MsG0180000544.01.T01:intron	35.0%
	GAAAAAAAATGCAATGGGGT+TGG	-	Chr1:7646514-7646533	MsG0180000544.01.T01:intron	35.0%
	GAAACTGTATTGTGTGAGTA+AGG	-	Chr1:7647426-7647445	MsG0180000544.01.T01:intron	35.0%
	GAAGATACTGCACATTCATA+GGG	+	Chr1:7648644-7648663	None:intergenic	35.0%
	GACAGGATATGATAAGAGTT+TGG	+	Chr1:7645646-7645665	None:intergenic	35.0%
	GATTTGAAGAAGAACGAGAT+TGG	+	Chr1:7645867-7645886	None:intergenic	35.0%
	GTAGATAGAGAAGGATTAAG+AGG	-	Chr1:7645393-7645412	MsG0180000544.01.T01:CDS	35.0%
	TAACCTTCGATTTCCTCTAT+TGG	-	Chr1:7645957-7645976	MsG0180000544.01.T01:CDS	35.0%
	TACAGGTCTTGATGTTGAAA+TGG	-	Chr1:7648239-7648258	MsG0180000544.01.T01:intron	35.0%
	TATAATTCAAGCTCAGCAAG+AGG	-	Chr1:7646703-7646722	MsG0180000544.01.T01:CDS	35.0%
	TCACCATCAACATTCATGTA+AGG	+	Chr1:7647701-7647720	None:intergenic	35.0%
	TCAGTATTCAAGTCACCAAA+AGG	+	Chr1:7649496-7649515	None:intergenic	35.0%
	TTACATTTCCAACTTGAGAC+TGG	+	Chr1:7647836-7647855	None:intergenic	35.0%
	TTCACGAAAACCAAACTCTT+AGG	-	Chr1:7645361-7645380	MsG0180000544.01.T01:CDS	35.0%
	TTTAACAAATACCAGCACAG+AGG	+	Chr1:7646360-7646379	None:intergenic	35.0%
!	CTGTGCTGGTATTTGTTAAA+AGG	-	Chr1:7646360-7646379	MsG0180000544.01.T01:CDS	35.0%
!	GAATCGCAGAGAAGAATTTT+AGG	+	Chr1:7644373-7644392	None:intergenic	35.0%
!	GAGTAATGATTTTGCTTTGC+AGG	-	Chr1:7649450-7649469	MsG0180000544.01.T01:CDS	35.0%
!	TATAGGTTGAAATCCAAGTG+AGG	-	Chr1:7647404-7647423	MsG0180000544.01.T01:intron	35.0%
!	TCACATTGTTTGTTTGGTTC+AGG	-	Chr1:7646743-7646762	MsG0180000544.01.T01:CDS	35.0%
!	TGGAAGTTTAAGCACTGTTA+GGG	-	Chr1:7648840-7648859	MsG0180000544.01.T01:intron	35.0%
!	TGGCTTTCTATTTTCACGAT+CGG	-	Chr1:7645614-7645633	MsG0180000544.01.T01:CDS	35.0%
!	TTTGCGTTTGAAATTGTCGA+GGG	-	Chr1:7648315-7648334	MsG0180000544.01.T01:intron	35.0%
!	TTTGGTTTAGGTTCAATTGC+TGG	-	Chr1:7644526-7644545	MsG0180000544.01.T01:intron	35.0%
!!	TCATTGATGATGGTAGTTTG+GGG	-	Chr1:7649102-7649121	MsG0180000544.01.T01:intron	35.0%
!!	TGGAAAATTCCTTGATTTGC+TGG	+	Chr1:7647810-7647829	None:intergenic	35.0%
!!!	ATTTTTTAATTGGTGCAGGC+TGG	-	Chr1:7647720-7647739	MsG0180000544.01.T01:intron	35.0%
!!!	GGTGATTTTTTAATTGGTGC+AGG	-	Chr1:7647716-7647735	MsG0180000544.01.T01:intron	35.0%
!!!	TGTAGTTAGTTTTGGGAGTT+TGG	-	Chr1:7649306-7649325	MsG0180000544.01.T01:intron	35.0%
!!!	TTCCGTTTTTTGTGCTCAAA+TGG	-	Chr1:7646279-7646298	MsG0180000544.01.T01:intron	35.0%
!!!	TTGTGTTTTTTGGCAGGTTA+TGG	-	Chr1:7648362-7648381	MsG0180000544.01.T01:intron	35.0%
	AACTATGGTTGAGGAATTCC+TGG	-	Chr1:7649269-7649288	MsG0180000544.01.T01:intron	40.0%
	AAGAAGAACGAGATTGGAGA+TGG	+	Chr1:7645861-7645880	None:intergenic	40.0%
	AAGAGAGAAGTGGAGAAAAG+AGG	+	Chr1:7644446-7644465	None:intergenic	40.0%
	AATCATTGAGAGCCTCAACT+CGG	+	Chr1:7647014-7647033	None:intergenic	40.0%
	ACTATGGTTGAGGAATTCCT+GGG	-	Chr1:7649270-7649289	MsG0180000544.01.T01:intron	40.0%
	ACTGAAGCAGAAAGGAAACT+AGG	-	Chr1:7649511-7649530	MsG0180000544.01.T01:CDS	40.0%
	ATCATAACCAACCTGTTGTG+AGG	+	Chr1:7647271-7647290	None:intergenic	40.0%
	ATCATATATGGTGCAGTCAC+TGG	+	Chr1:7646668-7646687	None:intergenic	40.0%
	ATGAGAGTTTCGGAGAAATG+AGG	+	Chr1:7645797-7645816	None:intergenic	40.0%
	ATTAATCGGCAGAGTAGGAA+TGG	+	Chr1:7647452-7647471	None:intergenic	40.0%
	CAACAGAGAAAACGAGAAAG+AGG	+	Chr1:7644345-7644364	None:intergenic	40.0%
	CAACGACTAGTAGATAGAGA+AGG	-	Chr1:7645384-7645403	MsG0180000544.01.T01:CDS	40.0%
	CACAATACAGTTTCCTCACT+TGG	+	Chr1:7647420-7647439	None:intergenic	40.0%
	CACCATATCAAAGAGAGAAG+TGG	+	Chr1:7644456-7644475	None:intergenic	40.0%
	CAGGACCAATCTCAAAAACA+CGG	+	Chr1:7648173-7648192	None:intergenic	40.0%
	CTACAATCAAGATGAGAGTG+TGG	-	Chr1:7647573-7647592	MsG0180000544.01.T01:intron	40.0%
	CTACCAATAGAGGAAATCGA+AGG	+	Chr1:7645963-7645982	None:intergenic	40.0%
	CTAGATCCAGCAATCAACTT+AGG	+	Chr1:7648045-7648064	None:intergenic	40.0%
	CTCCACTTCTCTCTTTGATA+TGG	-	Chr1:7644451-7644470	MsG0180000544.01.T01:intron	40.0%
	CTCCCAAAACTAACTACAAG+AGG	+	Chr1:7649304-7649323	None:intergenic	40.0%
	CTCCCTTACATGAATGTTGA+TGG	-	Chr1:7647695-7647714	MsG0180000544.01.T01:intron	40.0%
	CTTTCAACTTTCCCTCAGTA+CGG	+	Chr1:7645515-7645534	None:intergenic	40.0%
	GAAAATGTACTTGGGTAGAC+AGG	-	Chr1:7649021-7649040	MsG0180000544.01.T01:intron	40.0%
	GAAGTGGAGAAAAGAGGATT+AGG	+	Chr1:7644440-7644459	None:intergenic	40.0%
	GACAGGGATAAAAGACGTAA+AGG	+	Chr1:7648800-7648819	None:intergenic	40.0%
	GACATTTGCTTGTGAAGTTG+AGG	+	Chr1:7648132-7648151	None:intergenic	40.0%
	GAGGGAAAGTTGAAAGAAGA+TGG	-	Chr1:7645519-7645538	MsG0180000544.01.T01:intron	40.0%
	GCAGCATCCTCGATATTAAT+CGG	+	Chr1:7647466-7647485	None:intergenic	40.0%
	GGAAGATACTGCACATTCAT+AGG	+	Chr1:7648645-7648664	None:intergenic	40.0%
	GGAATTCCTCAACCATAGTT+AGG	+	Chr1:7649269-7649288	None:intergenic	40.0%
	GTAAGCGTGAGGGTAAAATA+AGG	+	Chr1:7644305-7644324	None:intergenic	40.0%
	TAGGTTCCTAACTATGGTTG+AGG	-	Chr1:7649260-7649279	MsG0180000544.01.T01:intron	40.0%
	TCGATATTAATCGGCAGAGT+AGG	+	Chr1:7647457-7647476	None:intergenic	40.0%
	TCTTTAGGCTGGACTACAAA+GGG	-	Chr1:7648082-7648101	MsG0180000544.01.T01:intron	40.0%
	TGAAATTGAGAAGGCCATTC+AGG	-	Chr1:7647498-7647517	MsG0180000544.01.T01:intron	40.0%
	TGAGAGTTTCGGAGAAATGA+GGG	+	Chr1:7645796-7645815	None:intergenic	40.0%
	TTCTTCTCTGCGATTCATCA+AGG	-	Chr1:7644377-7644396	MsG0180000544.01.T01:intron	40.0%
	TTGATTGCTGGATCTAGTGA+GGG	-	Chr1:7648048-7648067	MsG0180000544.01.T01:intron	40.0%
!	AACACCTTTAGGGGTTCAAA+CGG	+	Chr1:7648474-7648493	None:intergenic	40.0%
!	ACAACTTGTTCGTGTGAATC+AGG	-	Chr1:7647746-7647765	MsG0180000544.01.T01:intron	40.0%
!	ATGCATTTTGCGGTGTGATA+CGG	-	Chr1:7647962-7647981	MsG0180000544.01.T01:intron	40.0%
!	CTTTCTCGTTTTCTCTGTTG+CGG	-	Chr1:7644345-7644364	MsG0180000544.01.T01:intron	40.0%
!	GAATCTTCTGCTCTAAACAC+AGG	+	Chr1:7648192-7648211	None:intergenic	40.0%
!	GATTTTGCTTTGCAGGAAGT+TGG	-	Chr1:7649457-7649476	MsG0180000544.01.T01:CDS	40.0%
!	GGAGTAGAGATTGAACCTTT+TGG	-	Chr1:7649478-7649497	MsG0180000544.01.T01:CDS	40.0%
!	GGCTTTCTATTTTCACGATC+GGG	-	Chr1:7645615-7645634	MsG0180000544.01.T01:CDS	40.0%
!	GTGGAAGTTTAAGCACTGTT+AGG	-	Chr1:7648839-7648858	MsG0180000544.01.T01:intron	40.0%
!	GTTGCTGCTTGTAAGTTTGT+TGG	-	Chr1:7647907-7647926	MsG0180000544.01.T01:intron	40.0%
!	GTTTGCGTTTGAAATTGTCG+AGG	-	Chr1:7648314-7648333	MsG0180000544.01.T01:intron	40.0%
!	TACTCTGCCGATTAATATCG+AGG	-	Chr1:7647456-7647475	MsG0180000544.01.T01:intron	40.0%
!	TATGTAAGCCGCAGAGTATT+TGG	+	Chr1:7648666-7648685	None:intergenic	40.0%
!	TGTTGTGAGGCACCTTTAAT+AGG	+	Chr1:7647258-7647277	None:intergenic	40.0%
!	TTTTCACAGTTGTCAGCACT+TGG	+	Chr1:7645768-7645787	None:intergenic	40.0%
!!	AGAAGGTATTCAGATGCTCA+AGG	-	Chr1:7648689-7648708	MsG0180000544.01.T01:intron	40.0%
!!	ATGTGATAGGATGATGATGG+CGG	-	Chr1:7648766-7648785	MsG0180000544.01.T01:intron	40.0%
!!	GGTGCAACAGTTTTTAGAGA+TGG	-	Chr1:7645287-7645306	MsG0180000544.01.T01:intron	40.0%
!!	TATTAAAGGTGCCTCACAAC+AGG	-	Chr1:7647257-7647276	MsG0180000544.01.T01:intron	40.0%
!!!	TTTGGCCGTGTTTTTGAGAT+TGG	-	Chr1:7648165-7648184	MsG0180000544.01.T01:intron	40.0%
	AAGCAAAAAGGCCTCCAAGA+AGG	-	Chr1:7646829-7646848	MsG0180000544.01.T01:CDS	45.0%
	AATGCAATGGGGTTGGAATG+AGG	-	Chr1:7646521-7646540	MsG0180000544.01.T01:intron	45.0%
	ATCATTGAGAGCCTCAACTC+GGG	+	Chr1:7647013-7647032	None:intergenic	45.0%
	ATCTGCGGACTCACTAAATC+AGG	+	Chr1:7647162-7647181	None:intergenic	45.0%
	ATGCAATGGGGTTGGAATGA+GGG	-	Chr1:7646522-7646541	MsG0180000544.01.T01:intron	45.0%
	ATTCCAGCCGCTCCTATTAA+AGG	-	Chr1:7647243-7647262	MsG0180000544.01.T01:intron	45.0%
	CACAAGCTATTCGACCAGTT+GGG	-	Chr1:7647070-7647089	MsG0180000544.01.T01:intron	45.0%
	CAGCAATCAACTTAGGAGTG+TGG	+	Chr1:7648038-7648057	None:intergenic	45.0%
	CGACATCGACAATAGACTCA+CGG	+	Chr1:7647209-7647228	None:intergenic	45.0%
	CTAGTCGTTGCCTAAGAGTT+TGG	+	Chr1:7645374-7645393	None:intergenic	45.0%
	CTATGGTTGAGGAATTCCTG+GGG	-	Chr1:7649271-7649290	MsG0180000544.01.T01:intron	45.0%
	CTGCGGCTTACATATGAAGA+AGG	-	Chr1:7648672-7648691	MsG0180000544.01.T01:intron	45.0%
	GAGAAAACGAGAAAGAGGAG+TGG	+	Chr1:7644340-7644359	None:intergenic	45.0%
	GAGTCTATTGTCGATGTCGA+AGG	-	Chr1:7647210-7647229	MsG0180000544.01.T01:intron	45.0%
	GCACAGATGCCTATGAGTAA+AGG	+	Chr1:7648214-7648233	None:intergenic	45.0%
	GGAGTGAGTGATGAGAGTTT+CGG	+	Chr1:7645807-7645826	None:intergenic	45.0%
	GGCGAAGAAGAAAAAGAACG+CGG	+	Chr1:7645833-7645852	None:intergenic	45.0%
	GTCTTTAGGCTGGACTACAA+AGG	-	Chr1:7648081-7648100	MsG0180000544.01.T01:intron	45.0%
	GTTGATTGCTGGATCTAGTG+AGG	-	Chr1:7648047-7648066	MsG0180000544.01.T01:intron	45.0%
	TAAGAAGGATCTCGAAGCTG+TGG	-	Chr1:7648437-7648456	MsG0180000544.01.T01:intron	45.0%
	TACAAGAGGAAAGATACCCC+AGG	+	Chr1:7649290-7649309	None:intergenic	45.0%
	TATTGTCGATGTCGAAGGTG+TGG	-	Chr1:7647215-7647234	MsG0180000544.01.T01:intron	45.0%
	TCATTACTCGCTGCAAGACA+AGG	+	Chr1:7649439-7649458	None:intergenic	45.0%
	TCCAGTCGTTGACATTGACA+GGG	+	Chr1:7646990-7647009	None:intergenic	45.0%
	TGAAAAGCTTTGCAGCCAAG+AGG	-	Chr1:7644766-7644785	MsG0180000544.01.T01:intron	45.0%
	TGAGGCTCTCAATGATTCAC+TGG	-	Chr1:7647017-7647036	MsG0180000544.01.T01:CDS	45.0%
	TGATTCACTGGAGAACAAGC+CGG	-	Chr1:7647029-7647048	MsG0180000544.01.T01:CDS	45.0%
	TGATTTAGTGAGTCCGCAGA+TGG	-	Chr1:7647161-7647180	MsG0180000544.01.T01:intron	45.0%
	TTCCAACTTGAGACTGGATG+TGG	+	Chr1:7647830-7647849	None:intergenic	45.0%
	TTCCACATCCAGTCTCAAGT+TGG	-	Chr1:7647825-7647844	MsG0180000544.01.T01:intron	45.0%
	TTCGATTGGAGCTCAATGAG+CGG	+	Chr1:7646964-7646983	None:intergenic	45.0%
	TTTAATAGGAGCGGCTGGAA+TGG	+	Chr1:7647244-7647263	None:intergenic	45.0%
!	ACACCTTTAGGGGTTCAAAC+GGG	+	Chr1:7648473-7648492	None:intergenic	45.0%
!	CGTTTATTGGGTTGCCTACT+AGG	-	Chr1:7646121-7646140	MsG0180000544.01.T01:intron	45.0%
!	GATCCCCTTGCTGTCAATTA+TGG	-	Chr1:7646931-7646950	MsG0180000544.01.T01:CDS	45.0%
!	TGAGGCACCTTTAATAGGAG+CGG	+	Chr1:7647253-7647272	None:intergenic	45.0%
!!	CACACTCCTAAGTTGATTGC+TGG	-	Chr1:7648036-7648055	MsG0180000544.01.T01:intron	45.0%
	AACGCCATCTTCTTCCCAAC+TGG	+	Chr1:7647087-7647106	None:intergenic	50.0%
	AATAGACTCACGGCTGAGAG+CGG	+	Chr1:7647199-7647218	None:intergenic	50.0%
	ACGAGATTGGAGATGGTGTG+TGG	+	Chr1:7645854-7645873	None:intergenic	50.0%
	AGAAAGGAAACTAGGCCAGC+TGG	-	Chr1:7649519-7649538	MsG0180000544.01.T01:CDS	50.0%
	AGAAGAAAAAGAACGCGGCG+AGG	+	Chr1:7645828-7645847	None:intergenic	50.0%
	AGAGAGAGTCGATGTAGCAG+AGG	+	Chr1:7646902-7646921	None:intergenic	50.0%
	AGAGTCGATGTAGCAGAGGT+GGG	+	Chr1:7646898-7646917	None:intergenic	50.0%
	AGGCATCTGTGCGAGTTTAC+AGG	-	Chr1:7648222-7648241	MsG0180000544.01.T01:intron	50.0%
	ATTGCTGGATCTAGTGAGGG+TGG	-	Chr1:7648051-7648070	MsG0180000544.01.T01:intron	50.0%
	CATACTCAGGGTGCGTTTGA+TGG	+	Chr1:7645684-7645703	None:intergenic	50.0%
	CATTGACAGGGGTCTTCGAT+TGG	+	Chr1:7646978-7646997	None:intergenic	50.0%
	CCAGTCGTTGACATTGACAG+GGG	+	Chr1:7646989-7647008	None:intergenic	50.0%
	CTGCGAACACCAGCAAATCA+AGG	-	Chr1:7647798-7647817	MsG0180000544.01.T01:intron	50.0%
	GATCCTTCCGATGACAGTGT+CGG	+	Chr1:7646800-7646819	None:intergenic	50.0%
	GCACAAGCTATTCGACCAGT+TGG	-	Chr1:7647069-7647088	MsG0180000544.01.T01:intron	50.0%
	GCGGCAAATTTCACCATCTG+CGG	+	Chr1:7647177-7647196	None:intergenic	50.0%
	GGTCAGGATAGGATAGAGAC+AGG	+	Chr1:7645663-7645682	None:intergenic	50.0%
	GTACCCGTTTGAACCCCTAA+AGG	-	Chr1:7648467-7648486	MsG0180000544.01.T01:intron	50.0%
	GTCCAGTCGTTGACATTGAC+AGG	+	Chr1:7646991-7647010	None:intergenic	50.0%
	TCAACTTTCCCTCAGTACGG+AGG	+	Chr1:7645512-7645531	None:intergenic	50.0%
	TCAAGAGCCGACACTGTCAT+CGG	-	Chr1:7646790-7646809	MsG0180000544.01.T01:CDS	50.0%
	TCGACCAGTTGGGAAGAAGA+TGG	-	Chr1:7647080-7647099	MsG0180000544.01.T01:intron	50.0%
	TCGATTGGAGCTCAATGAGC+GGG	+	Chr1:7646963-7646982	None:intergenic	50.0%
	TGGTTTCACCGTACAGTGCT+TGG	-	Chr1:7647125-7647144	MsG0180000544.01.T01:intron	50.0%
	TTGCGGTGTGATACGGTGTT+GGG	-	Chr1:7647969-7647988	MsG0180000544.01.T01:intron	50.0%
	TTTGCGGTGTGATACGGTGT+TGG	-	Chr1:7647968-7647987	MsG0180000544.01.T01:intron	50.0%
!	AACAAGCCGGTTCTAATCCG+TGG	-	Chr1:7647042-7647061	MsG0180000544.01.T01:intron	50.0%
!	ACAAGCCGGTTCTAATCCGT+GGG	-	Chr1:7647043-7647062	MsG0180000544.01.T01:intron	50.0%
!	GTGCGTTTGATGGTCAGGAT+AGG	+	Chr1:7645674-7645693	None:intergenic	50.0%
!	TGCCTGAACCAAGCACTGTA+CGG	+	Chr1:7647136-7647155	None:intergenic	50.0%
!!	AAAGGTGCCTCACAACAGGT+TGG	-	Chr1:7647261-7647280	MsG0180000544.01.T01:intron	50.0%
!!	AGCTTAATGGGTTGCCCTCT+AGG	-	Chr1:7646401-7646420	MsG0180000544.01.T01:intron	50.0%
!!	CTTGATTTGCTGGTGTTCGC+AGG	+	Chr1:7647800-7647819	None:intergenic	50.0%
!!!	GCGTTGCTTTTCCAGCTTTG+CGG	+	Chr1:7646858-7646877	None:intergenic	50.0%
	AGAGCGTGAGAGTAAGCGTG+AGG	+	Chr1:7644316-7644335	None:intergenic	55.0%
	AGGGTGGAGCTGCTGTCTTT+AGG	-	Chr1:7648067-7648086	MsG0180000544.01.T01:intron	55.0%
	ATGTGGTCTCCTCCGTACTG+AGG	-	Chr1:7645500-7645519	MsG0180000544.01.T01:intron	55.0%
	CAAGAAGGATGCCGCAAAGC+TGG	-	Chr1:7646844-7646863	MsG0180000544.01.T01:CDS	55.0%
	CACCGTACAGTGCTTGGTTC+AGG	-	Chr1:7647131-7647150	MsG0180000544.01.T01:intron	55.0%
	CAGCTTTGCGGCATCCTTCT+TGG	+	Chr1:7646846-7646865	None:intergenic	55.0%
	CCCCTGTCAATGTCAACGAC+TGG	-	Chr1:7646986-7647005	MsG0180000544.01.T01:CDS	55.0%
	CTTTGCGGCATCCTTCTTGG+AGG	+	Chr1:7646843-7646862	None:intergenic	55.0%
	GAAGTTGAGGTGACTGAGCC+AGG	+	Chr1:7648119-7648138	None:intergenic	55.0%
	GAGAGTCGATGTAGCAGAGG+TGG	+	Chr1:7646899-7646918	None:intergenic	55.0%
	GAGCGTGAGAGTAAGCGTGA+GGG	+	Chr1:7644315-7644334	None:intergenic	55.0%
	GAGTCGATGTAGCAGAGGTG+GGG	+	Chr1:7646897-7646916	None:intergenic	55.0%
	GCACCTTTAATAGGAGCGGC+TGG	+	Chr1:7647249-7647268	None:intergenic	55.0%
	GTGATGTGATGCCTCTGTGC+TGG	-	Chr1:7646346-7646365	MsG0180000544.01.T01:CDS	55.0%
	TGGAGCTGCTGTCTTTAGGC+TGG	-	Chr1:7648071-7648090	MsG0180000544.01.T01:intron	55.0%
	TGTGGTCTCCTCCGTACTGA+GGG	-	Chr1:7645501-7645520	MsG0180000544.01.T01:intron	55.0%
!	GAATAGCTTGTGCCCTCCCA+CGG	+	Chr1:7647062-7647081	None:intergenic	55.0%
!	TCAGGGTGCGTTTGATGGTC+AGG	+	Chr1:7645679-7645698	None:intergenic	55.0%
	CAAAGGGCAACCTGCATGCC+TGG	-	Chr1:7648098-7648117	MsG0180000544.01.T01:intron	60.0%
	CAACGACTGGACCCGAGTTG+AGG	-	Chr1:7646999-7647018	MsG0180000544.01.T01:CDS	60.0%
	GAGCCGACACTGTCATCGGA+AGG	-	Chr1:7646794-7646813	MsG0180000544.01.T01:CDS	60.0%
	TCGATGTAGCAGAGGTGGGG+CGG	+	Chr1:7646894-7646913	None:intergenic	60.0%
!	AGCCGGTTCTAATCCGTGGG+AGG	-	Chr1:7647046-7647065	MsG0180000544.01.T01:intron	60.0%
!	GCCGGTTCTAATCCGTGGGA+GGG	-	Chr1:7647047-7647066	MsG0180000544.01.T01:intron	60.0%
!	GGTGTGATACGGTGTTGGGC+AGG	-	Chr1:7647973-7647992	MsG0180000544.01.T01:intron	60.0%
!!	GCCCTCCCACGGATTAGAAC+CGG	+	Chr1:7647051-7647070	None:intergenic	60.0%
	AGACTCACGGCTGAGAGCGG+CGG	+	Chr1:7647196-7647215	None:intergenic	65.0%
	GAGGTGGGGCGGCAACTTCT+CGG	+	Chr1:7646883-7646902	None:intergenic	65.0%
	GGTGACTGAGCCAGGCATGC+AGG	+	Chr1:7648111-7648130	None:intergenic	65.0%
	GTGGGGCGGCAACTTCTCGG+CGG	+	Chr1:7646880-7646899	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	7644265	7649555	7644265	ID=MsG0180000544.01;Name=MsG0180000544.01
Chr1	mRNA	7644265	7649555	7644265	ID=MsG0180000544.01.T01;Parent=MsG0180000544.01;Name=MsG0180000544.01.T01;_AED=0.49;_eAED=0.50;_QI=0\|0.85\|0.5\|1\|0.71\|0.62\|8\|0\|482
Chr1	exon	7649422	7649555	7649422	ID=MsG0180000544.01.T01:exon:2860;Parent=MsG0180000544.01.T01
Chr1	CDS	7649422	7649555	7649422	ID=MsG0180000544.01.T01:cds;Parent=MsG0180000544.01.T01
Chr1	CDS	7646542	7647055	7646542	ID=MsG0180000544.01.T01:cds;Parent=MsG0180000544.01.T01
Chr1	CDS	7646301	7646411	7646301	ID=MsG0180000544.01.T01:cds;Parent=MsG0180000544.01.T01
Chr1	CDS	7645904	7646082	7645904	ID=MsG0180000544.01.T01:cds;Parent=MsG0180000544.01.T01
Chr1	CDS	7645536	7645797	7645536	ID=MsG0180000544.01.T01:cds;Parent=MsG0180000544.01.T01
Chr1	CDS	7645332	7645442	7645332	ID=MsG0180000544.01.T01:cds;Parent=MsG0180000544.01.T01
Chr1	CDS	7645110	7645163	7645110	ID=MsG0180000544.01.T01:cds;Parent=MsG0180000544.01.T01
Chr1	CDS	7644265	7644348	7644265	ID=MsG0180000544.01.T01:cds;Parent=MsG0180000544.01.T01
Chr1	mRNA	7644265	7648042	7644265	ID=MsG0180000544.01.T02;Parent=MsG0180000544.01;Name=MsG0180000544.01.T02;_AED=0.49;_eAED=0.50;_QI=445\|0.85\|0.62\|1\|0.71\|0.62\|8\|0\|326
Chr1	exon	7647932	7648042	7647932	ID=MsG0180000544.01.T02:exon:2868;Parent=MsG0180000544.01.T02
Chr1	five_prime_UTR	7647932	7648042	7647932	ID=MsG0180000544.01.T02:five_prime_utr;Parent=MsG0180000544.01.T02
Chr1	five_prime_UTR	7646722	7647055	7646722	ID=MsG0180000544.01.T02:five_prime_utr;Parent=MsG0180000544.01.T02
Chr1	CDS	7646542	7646721	7646542	ID=MsG0180000544.01.T02:cds;Parent=MsG0180000544.01.T02
Chr1	CDS	7646301	7646411	7646301	ID=MsG0180000544.01.T02:cds;Parent=MsG0180000544.01.T02
Chr1	CDS	7645904	7646082	7645904	ID=MsG0180000544.01.T02:cds;Parent=MsG0180000544.01.T02
Chr1	CDS	7645536	7645797	7645536	ID=MsG0180000544.01.T02:cds;Parent=MsG0180000544.01.T02
Chr1	CDS	7645332	7645442	7645332	ID=MsG0180000544.01.T02:cds;Parent=MsG0180000544.01.T02
Chr1	CDS	7645110	7645163	7645110	ID=MsG0180000544.01.T02:cds;Parent=MsG0180000544.01.T02
Chr1	CDS	7644265	7644348	7644265	ID=MsG0180000544.01.T02:cds;Parent=MsG0180000544.01.T02

Gene Sequence

>MsG0180000544.01.T02

ATGGCGTTCTTAGTCATCAGAGAAAATGGTTTCACCGTACAGTGCTTGGTTCAGGCACAACCTGATTTAGTGAGTCCGCAGATGGTGAAATTTGCCGCCGCTCTCAGCCGTGAGTCTATTGTCGATGTCGAAGGTGTGGTTTCCATTCCAGCCGCTCCTATTAAAGGTGCCTCACAACAGGTTGAAATCCAAGTGAGGAAACTGTATTGTGTGAGTAAGGCCATTCCTACTCTGCCGATTAATATCGAGGATGCTGCTCGAAGTGAAGTTGAAATTGAGAAGGCCATTCAGGCTGGTGAACAACTTGTTCGTGTGAATCAGGATACACGATTGAATTTTAGAGTACTTGACCTGCGAACACCAGCAAATCAAGGAATTTTCCACATCCAGTCTCAAGTTGGAAATGTAAAGCCTATTTTCTCTAATATTATTCTGACAAGTTTTTTTTTATTTAATCATAGTTGCTGCTTCTTTGTTGAAATCCACACTCCTAAGTTGATTGCTGGATCTAGTGAGGGTGGAGCTGCTGTCTTTAGGCTGGACTACAAAGGGCAACCTGCATGCCTGGCTCAGTCACCTCAACTTCACAAGCAAATGTCAATATGTGGTGATTTTGGCCGTGTTTTTGAGATTGGTCCTGTGTTTAGAGCAGAAGATTCCTTTACTCATAGGCATCTGTGCGAGTTTACAGGTCTTGATGTTGAAATGGAGATTAAGAAACATTATTATGAGGTTATGGATGTAGTTGACAAATTGTTTGTTGCTATGTTTGACACTTTGAACACAAAATGTAAGAAGGATCTCGAAGCTGTGGCAAATCAGTACCCGTTTGAACCCCTAAAGTATCTTCCAAATACTCTGCGGCTTACATATGAAGAAGGTATTCAGATGCTCAAGGAAGTTGGAGTAGAGATTGAACCTTTTGGTGACTTGAATACTGAAGCAGAAAGGAAACTAGGCCAGCTGGTTTTAGAAAAGTAA

>MsG0180000544.01.T01

AGTTTGGGCTGGGTTAAAATTAACCTATCCGCTGAATCCTTATTTTACCCTCACGCTTACTCTCACGCTCTTCCACTCCTCTTTCTCGTTTTCTCTGTTGCGGCTCCTAAAATTCTTCTCTGCGATTCATCAAGGAAAATCAATGTCAACTTCAGAATCTCAAGAGCCGACACTGTCATCGGAAGGATCAGAAACAGAAAGCAAAAAGGCCTCCAAGAAGGATGCCGCAAAGCTGGAAAAGCAACGCCGCCGAGAAGTTGCCGCCCCACCTCTGCTACATCGACTCTCTCTGTCGAAGATGATCCCCTTGCTGTCAATTATGGTATTGTCCCGCTCATTGAGCTCCAATCGAAGACCCCTGTCAATGTCAACGACTGGACCCGAGTTGAGGCTCTCAATGATTCACTGGAGAACAAGCCGGTTCTAATCCGTGGGAGGGCACAAGCTATTCGACCAGTTGGGAAGAAGATGGCGTTCTTAGTCATCAGAGAAAATGGTTTCACCGTACAGTGCTTGGTTCAGGCACAACCTGATTTAGTGAGTCCGCAGATGGTGAAATTTGCCGCCGCTCTCAGCCGTGAGTCTATTGTCGATGTCGAAGGTGTGGTTTCCATTCCAGCCGCTCCTATTAAAGGTGCCTCACAACAGGTTGAAATCCAAGTGAGGAAACTGTATTGTGTGAGTAAGGCCATTCCTACTCTGCCGATTAATATCGAGGATGCTGCTCGAAGTGAAGTTGAAATTGAGAAGGCCATTCAGGCTGGTGAACAACTTGTTCGTGTGAATCAGGATACACGATTGAATTTTAGAGTACTTGACCTGCGAACACCAGCAAATCAAGGAATTTTCCACATCCAGTCTCAAGTTGGAAATGTAAAGCCTATTTTCTCTAATATTATTCTGACAAGTTTTTTTTTATTTAATCATAGTTGCTGCTTCTTTGTTGAAATCCACACTCCTAAGTTGATTGCTGGATCTAGTGAGGGTGGAGCTGCTGTCTTTAGGCTGGACTACAAAGGGCAACCTGCATGCCTGGCTCAGTCACCTCAACTTCACAAGCAAATGTCAATATGTGGTGATTTTGGCCGTGTTTTTGAGATTGGTCCTGTGTTTAGAGCAGAAGATTCCTTTACTCATAGGCATCTGTGCGAGTTTACAGGTCTTGATGTTGAAATGGAGATTAAGAAACATTATTATGAGGTTATGGATGTAGTTGACAAATTGTTTGTTGCTATGTTTGACACTTTGAACACAAAATGTAAGAAGGATCTCGAAGCTGTGGCAAATCAGTACCCGTTTGAACCCCTAAAGTATCTTCCAAATACTCTGCGGCTTACATATGAAGAAGGTATTCAGATGCTCAAGGAAGTTGGAGTAGAGATTGAACCTTTTGGTGACTTGAATACTGAAGCAGAAAGGAAACTAGGCCAGCTGGTTTTAGAAAAGTAA

Protein sequence

>MsG0180000544.01.T02

MAFLVIRENGFTVQCLVQAQPDLVSPQMVKFAAALSRESIVDVEGVVSIPAAPIKGASQQVEIQVRKLYCVSKAIPTLPINIEDAARSEVEIEKAIQAGEQLVRVNQDTRLNFRVLDLRTPANQGIFHIQSQVGNVKPIFSNIILTSFFLFNHSCCFFVEIHTPKLIAGSSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKKHYYEVMDVVDKLFVAMFDTLNTKCKKDLEAVANQYPFEPLKYLPNTLRLTYEEGIQMLKEVGVEIEPFGDLNTEAERKLGQLVLEK*

>MsG0180000544.01.T01

SLGWVKINLSAESLFYPHAYSHALPLLFLVFSVAAPKILLCDSSRKINVNFRISRADTVIGRIRNRKQKGLQEGCRKAGKATPPRSCRPTSATSTLSVEDDPLAVNYGIVPLIELQSKTPVNVNDWTRVEALNDSLENKPVLIRGRAQAIRPVGKKMAFLVIRENGFTVQCLVQAQPDLVSPQMVKFAAALSRESIVDVEGVVSIPAAPIKGASQQVEIQVRKLYCVSKAIPTLPINIEDAARSEVEIEKAIQAGEQLVRVNQDTRLNFRVLDLRTPANQGIFHIQSQVGNVKPIFSNIILTSFFLFNHSCCFFVEIHTPKLIAGSSEGGAAVFRLDYKGQPACLAQSPQLHKQMSICGDFGRVFEIGPVFRAEDSFTHRHLCEFTGLDVEMEIKKHYYEVMDVVDKLFVAMFDTLNTKCKKDLEAVANQYPFEPLKYLPNTLRLTYEEGIQMLKEVGVEIEPFGDLNTEAERKLGQLVLEK*