AlfalfaGEDB | Msa0005390

M. sativa cultivar zhongmu-4 / Msa0005390

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0005390	Msa0030790	0.821951	3.072854e-53	-8.615850e-47
Msa0005390	Msa0046050	-0.800775	1.230566e-48	-8.615850e-47
Msa0005390	Msa0053850	0.976186	2.401290e-141	-8.615850e-47
Msa0005390	Msa0058230	0.856691	2.710395e-62	-8.615850e-47
Msa0005390	Msa0058370	0.858353	8.730792e-63	-8.615850e-47
Msa0005390	Msa0069350	0.807662	4.530859e-50	-8.615850e-47
Msa0005390	Msa0104570	0.813520	2.455342e-51	-8.615850e-47
Msa0005390	Msa0145850	0.822746	2.008293e-53	-8.615850e-47
Msa0005390	Msa0148310	0.815488	9.012920e-52	-8.615850e-47
Msa0005390	Msa0150590	0.815560	8.683496e-52	-8.615850e-47
Msa0005390	Msa0336430	0.813956	1.968593e-51	-8.615850e-47
Msa0005390	Msa0336460	0.807300	5.406767e-50	-8.615850e-47
Msa0005390	Msa0336520	0.817362	3.430780e-52	-8.615850e-47
Msa0005390	Msa0420680	0.816257	6.071725e-52	-8.615850e-47
Msa0005390	Msa0427820	0.839756	1.310088e-57	-8.615850e-47
Msa0005390	Msa0474060	0.839308	1.712223e-57	-8.615850e-47
Msa0005390	Msa0512520	0.810846	9.406826e-51	-8.615850e-47
Msa0005390	Msa0518680	0.850522	1.608377e-60	-8.615850e-47
Msa0005390	Msa0530660	0.813366	2.655064e-51	-8.615850e-47
Msa0005390	Msa0557850	0.812241	4.680586e-51	-8.615850e-47
Msa0005390	Msa0587180	0.808880	2.492231e-50	-8.615850e-47
Msa0005390	Msa0626980	0.811312	7.457323e-51	-8.615850e-47
Msa0005390	Msa0627360	0.812502	4.104910e-51	-8.615850e-47
Msa0005390	Msa0673940	0.806646	7.436793e-50	-8.615850e-47
Msa0005390	Msa0695560	0.813748	2.187362e-51	-8.615850e-47
Msa0005390	Msa0862170	0.808245	3.405672e-50	-8.615850e-47
Msa0005390	Msa0978980	0.811005	8.691678e-51	-8.615850e-47
Msa0005390	Msa1033420	0.802333	5.895901e-49	-8.615850e-47
Msa0005390	Msa1073060	0.803928	2.757615e-49	-8.615850e-47
Msa0005390	Msa1160780	0.816497	5.363526e-52	-8.615850e-47
Msa0005390	Msa1227760	0.805147	1.536051e-49	-8.615850e-47
Msa0005390	Msa1231440	0.800099	1.689672e-48	-8.615850e-47
Msa0005390	Msa1356220	0.803826	2.895569e-49	-8.615850e-47
Msa0005390	Msa1360930	0.810163	1.321420e-50	-8.615850e-47
Msa0005390	Msa1363690	0.808923	2.439151e-50	-8.615850e-47
Msa0005390	Msa1369410	0.801683	8.020377e-49	-8.615850e-47
Msa0005390	Msa1371800	0.803659	3.136426e-49	-8.615850e-47
Msa0005390	Msa1372030	0.823997	1.024884e-53	-8.615850e-47
Msa0005390	Msa1377140	0.813672	2.274019e-51	-8.615850e-47
Msa0005390	Msa1438140	0.819037	1.432871e-52	-8.615850e-47
Msa0005390	Msa1453030	0.812045	5.164727e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0005390	MtrunA17_Chr1g0150751	86.667	240	30	2	1	239	1	239	2.45e-94	276

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 69 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTCGCCTTCTTCGGGTTC+AGG	0.278379	1_1:-7892908	Msa0005390:CDS
TGAGGCATAATAATAGTAAT+AGG	0.283637	1_1:+7892835	None:intergenic
TTTGAAATCTTCGCCTTCTT+CGG	0.306660	1_1:-7892915	Msa0005390:CDS
GGTGGTCCACCAATTACTTT+AGG	0.326407	1_1:+7892875	None:intergenic
CAAGGACAACCTAAAGTAAT+TGG	0.337399	1_1:-7892884	Msa0005390:CDS
TTGAAATCTTCGCCTTCTTC+GGG	0.338296	1_1:-7892914	Msa0005390:CDS
GAATTTGATGAAGCAAGTTT+AGG	0.338870	1_1:+7893256	None:intergenic
AGTCCTTCGTCACATTCTTC+CGG	0.348481	1_1:-7892956	Msa0005390:CDS
GTCCTTCGTCACATTCTTCC+GGG	0.349605	1_1:-7892955	Msa0005390:CDS
TTTGATGATGTGAGTGGAAA+TGG	0.378894	1_1:+7893073	None:intergenic
TTCATCAGATATTCTTTGCT+TGG	0.384427	1_1:-7892757	Msa0005390:CDS
TAATAATAGTAATAGGGATA+TGG	0.384788	1_1:+7892842	None:intergenic
TGTGTTAGGAGTGGAGTAGA+TGG	0.387212	1_1:+7893136	None:intergenic
TTTAGAAGTGAAGGAGGAGG+AGG	0.388578	1_1:+7893046	None:intergenic
GTTAATAGTGGAGGAGGTGG+AGG	0.430557	1_1:+7893109	None:intergenic
TGGGGTGTTATTAGTGGAAA+AGG	0.432885	1_1:+7893163	None:intergenic
ATGGGTCATAACAAGAATCT+AGG	0.435363	1_1:-7893451	Msa0005390:CDS
TTGATGATGTGAGTGGAAAT+GGG	0.439050	1_1:+7893074	None:intergenic
CCTTCTTCGGGTTCAGGTCA+AGG	0.439335	1_1:-7892902	Msa0005390:CDS
GGTGAATATGATGTTAATAG+TGG	0.445887	1_1:+7893097	None:intergenic
GAGGCATAATAATAGTAATA+GGG	0.446723	1_1:+7892836	None:intergenic
AGTGGAGTAGATGGAGGGTG+GGG	0.452281	1_1:+7893145	None:intergenic
GGAGGGTGGGGTGTTATTAG+TGG	0.452753	1_1:+7893157	None:intergenic
ATGCATAATAAACCACTTGA+AGG	0.460999	1_1:+7893322	None:intergenic
GGGGTGTTATTAGTGGAAAA+GGG	0.461571	1_1:+7893164	None:intergenic
GATGTTAATAGTGGAGGAGG+TGG	0.484497	1_1:+7893106	None:intergenic
AAAGAGAACATTGGAGATTG+AGG	0.496507	1_1:-7893362	Msa0005390:CDS
GGGTGTTATTAGTGGAAAAG+GGG	0.496788	1_1:+7893165	None:intergenic
GAGTGGAGTAGATGGAGGGT+GGG	0.505478	1_1:+7893144	None:intergenic
GAAGAATGTGACGAAGGACT+TGG	0.508990	1_1:+7892959	None:intergenic
GGCGAAGATTTCAAAGGTGG+TGG	0.511485	1_1:+7892923	None:intergenic
GGAGTGGAGTAGATGGAGGG+TGG	0.519473	1_1:+7893143	None:intergenic
TTTGTTTGCAAAGAGAACAT+TGG	0.519949	1_1:-7893371	Msa0005390:CDS
GGTGGTGGTGAACAAATTGT+AGG	0.526245	1_1:+7893280	None:intergenic
GTCAACAAAGGAGGAGGTGA+AGG	0.526752	1_1:+7893199	None:intergenic
TTTGATGAAGCAAGTTTAGG+AGG	0.539473	1_1:+7893259	None:intergenic
GATGAAGCAAGTTTAGGAGG+TGG	0.545014	1_1:+7893262	None:intergenic
GAAGATTTCAAAGGTGGTGG+AGG	0.554576	1_1:+7892926	None:intergenic
GAATGTGACGAAGGACTTGG+TGG	0.555897	1_1:+7892962	None:intergenic
CCTTGACCTGAACCCGAAGA+AGG	0.567300	1_1:+7892902	None:intergenic
TATGATGTTAATAGTGGAGG+AGG	0.568744	1_1:+7893103	None:intergenic
GGACAACCTAAAGTAATTGG+TGG	0.583322	1_1:-7892881	Msa0005390:CDS
GAAGCAAGTTTAGGAGGTGG+TGG	0.584772	1_1:+7893265	None:intergenic
TGATGATGTGAGTGGAAATG+GGG	0.585770	1_1:+7893075	None:intergenic
AAAGTTGAAGAGCCTTCAAG+TGG	0.589794	1_1:-7893334	Msa0005390:CDS
AGGTGGTGGAGGAGTTTCCC+CGG	0.592101	1_1:+7892937	None:intergenic
GTGGTGGAAGACTTAGTGAT+GGG	0.594811	1_1:+7893011	None:intergenic
GTTAGGAGTGGAGTAGATGG+AGG	0.597422	1_1:+7893139	None:intergenic
TTAGGAGTGGAGTAGATGGA+GGG	0.598597	1_1:+7893140	None:intergenic
TTTGGTGTCAACAAAGGAGG+AGG	0.602071	1_1:+7893193	None:intergenic
GGTGCATTTGGTGTCAACAA+AGG	0.602133	1_1:+7893187	None:intergenic
GAAGGACTTGGTGGAGATGG+TGG	0.605778	1_1:+7892971	None:intergenic
GGTGGAAGACTTAGTGATGG+GGG	0.608316	1_1:+7893013	None:intergenic
GACGAAGGACTTGGTGGAGA+TGG	0.610720	1_1:+7892968	None:intergenic
GAATATGATGTTAATAGTGG+AGG	0.611804	1_1:+7893100	None:intergenic
GGTAGAGTCAACAATGGTGG+TGG	0.613265	1_1:+7892995	None:intergenic
GGACTTGGTGGAGATGGTGG+CGG	0.623426	1_1:+7892974	None:intergenic
GGAGAATTTGATGATGTGAG+TGG	0.631413	1_1:+7893067	None:intergenic
GCATTTGGTGTCAACAAAGG+AGG	0.639121	1_1:+7893190	None:intergenic
TCCTTCGTCACATTCTTCCG+GGG	0.641768	1_1:-7892954	Msa0005390:CDS
TGGTGGAAGACTTAGTGATG+GGG	0.649103	1_1:+7893012	None:intergenic
GAAGAAGGCGAAGATTTCAA+AGG	0.649156	1_1:+7892917	None:intergenic
GAAGGCGAAGATTTCAAAGG+TGG	0.657373	1_1:+7892920	None:intergenic
GGCGGTAGAGTCAACAATGG+TGG	0.660549	1_1:+7892992	None:intergenic
GGTGGTGGAAGACTTAGTGA+TGG	0.666350	1_1:+7893010	None:intergenic
GGTGTTATTAGTGGAAAAGG+GGG	0.675151	1_1:+7893166	None:intergenic
TCCCCGGAAGAATGTGACGA+AGG	0.679405	1_1:+7892953	None:intergenic
GATGATGTGAGTGGAAATGG+GGG	0.687997	1_1:+7893076	None:intergenic
GGTGGCGGTAGAGTCAACAA+TGG	0.730976	1_1:+7892989	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATTGTATTCATGTTGT+TGG	-	chr1_1:7892810-7892829	Msa0005390:CDS	20.0%
!!	TAATAATAGTAATAGGGATA+TGG	+	chr1_1:7893366-7893385	None:intergenic	20.0%
!	TAGGATTCATAACAAAAAGT+TGG	-	chr1_1:7892773-7892792	Msa0005390:CDS	25.0%
!!	CAACATGAATACAATTTTTG+TGG	+	chr1_1:7892809-7892828	None:intergenic	25.0%
!	GAGGCATAATAATAGTAATA+GGG	+	chr1_1:7893372-7893391	None:intergenic	25.0%
!	TGAGGCATAATAATAGTAAT+AGG	+	chr1_1:7893373-7893392	None:intergenic	25.0%
!!	TAACAAAAAGTTGGTTTGCA+TGG	-	chr1_1:7892782-7892801	Msa0005390:CDS	30.0%
	TTTGTTTGCAAAGAGAACAT+TGG	-	chr1_1:7892834-7892853	Msa0005390:CDS	30.0%
	ATGCATAATAAACCACTTGA+AGG	+	chr1_1:7892886-7892905	None:intergenic	30.0%
	GAATTTGATGAAGCAAGTTT+AGG	+	chr1_1:7892952-7892971	None:intergenic	30.0%
	GAATATGATGTTAATAGTGG+AGG	+	chr1_1:7893108-7893127	None:intergenic	30.0%
	GGTGAATATGATGTTAATAG+TGG	+	chr1_1:7893111-7893130	None:intergenic	30.0%
!!	TATGATTTTAGAAGTGAAGG+AGG	+	chr1_1:7893168-7893187	None:intergenic	30.0%
!!	GGATATGATTTTAGAAGTGA+AGG	+	chr1_1:7893171-7893190	None:intergenic	30.0%
	TTCATCAGATATTCTTTGCT+TGG	-	chr1_1:7893448-7893467	Msa0005390:CDS	30.0%
	ATGGGTCATAACAAGAATCT+AGG	-	chr1_1:7892754-7892773	Msa0005390:CDS	35.0%
	AAAGAGAACATTGGAGATTG+AGG	-	chr1_1:7892843-7892862	Msa0005390:CDS	35.0%
	TTTGATGAAGCAAGTTTAGG+AGG	+	chr1_1:7892949-7892968	None:intergenic	35.0%
!	TATGATGTTAATAGTGGAGG+AGG	+	chr1_1:7893105-7893124	None:intergenic	35.0%
!!	TTGATGATGTGAGTGGAAAT+GGG	+	chr1_1:7893134-7893153	None:intergenic	35.0%
!!	TTTGATGATGTGAGTGGAAA+TGG	+	chr1_1:7893135-7893154	None:intergenic	35.0%
!	TTTGAAATCTTCGCCTTCTT+CGG	-	chr1_1:7893290-7893309	Msa0005390:CDS	35.0%
	CAAGGACAACCTAAAGTAAT+TGG	-	chr1_1:7893321-7893340	Msa0005390:CDS	35.0%
!!	TAGGGATATGGATAGTTTTG+TGG	+	chr1_1:7893354-7893373	None:intergenic	35.0%
	AGAAAAATGAGATGCACTTG+AGG	+	chr1_1:7893391-7893410	None:intergenic	35.0%
	AAAGTTGAAGAGCCTTCAAG+TGG	-	chr1_1:7892871-7892890	Msa0005390:CDS	40.0%
!	AGGTGAAGGATTTTGTGTTG+GGG	+	chr1_1:7892995-7893014	None:intergenic	40.0%
!	GAGGTGAAGGATTTTGTGTT+GGG	+	chr1_1:7892996-7893015	None:intergenic	40.0%
!!	GGTGTTATTAGTGGAAAAGG+GGG	+	chr1_1:7893042-7893061	None:intergenic	40.0%
!!	GGGTGTTATTAGTGGAAAAG+GGG	+	chr1_1:7893043-7893062	None:intergenic	40.0%
!!	GGGGTGTTATTAGTGGAAAA+GGG	+	chr1_1:7893044-7893063	None:intergenic	40.0%
!!	TGGGGTGTTATTAGTGGAAA+AGG	+	chr1_1:7893045-7893064	None:intergenic	40.0%
!	TGATGATGTGAGTGGAAATG+GGG	+	chr1_1:7893133-7893152	None:intergenic	40.0%
!!	GGAGAATTTGATGATGTGAG+TGG	+	chr1_1:7893141-7893160	None:intergenic	40.0%
!!	GATTTTAGAAGTGAAGGAGG+AGG	+	chr1_1:7893165-7893184	None:intergenic	40.0%
	GAAGAAGGCGAAGATTTCAA+AGG	+	chr1_1:7893291-7893310	None:intergenic	40.0%
	TTGAAATCTTCGCCTTCTTC+GGG	-	chr1_1:7893291-7893310	Msa0005390:CDS	40.0%
	GGACAACCTAAAGTAATTGG+TGG	-	chr1_1:7893324-7893343	Msa0005390:CDS	40.0%
!!!	GGATATGGATAGTTTTGTGG+TGG	+	chr1_1:7893351-7893370	None:intergenic	40.0%
!	GGTGGTGGTGAACAAATTGT+AGG	+	chr1_1:7892928-7892947	None:intergenic	45.0%
	GATGAAGCAAGTTTAGGAGG+TGG	+	chr1_1:7892946-7892965	None:intergenic	45.0%
!	GGTGAAGGATTTTGTGTTGG+GGG	+	chr1_1:7892994-7893013	None:intergenic	45.0%
!	GGAGGTGAAGGATTTTGTGT+TGG	+	chr1_1:7892997-7893016	None:intergenic	45.0%
!!	TTTGGTGTCAACAAAGGAGG+AGG	+	chr1_1:7893015-7893034	None:intergenic	45.0%
!!	GCATTTGGTGTCAACAAAGG+AGG	+	chr1_1:7893018-7893037	None:intergenic	45.0%
!!	GGTGCATTTGGTGTCAACAA+AGG	+	chr1_1:7893021-7893040	None:intergenic	45.0%
	TTAGGAGTGGAGTAGATGGA+GGG	+	chr1_1:7893068-7893087	None:intergenic	45.0%
	TGTGTTAGGAGTGGAGTAGA+TGG	+	chr1_1:7893072-7893091	None:intergenic	45.0%
!	GGAGGATTTTGTGTTAGGAG+TGG	+	chr1_1:7893081-7893100	None:intergenic	45.0%
!	GAGGTGGAGGATTTTGTGTT+AGG	+	chr1_1:7893086-7893105	None:intergenic	45.0%
!	GATGTTAATAGTGGAGGAGG+TGG	+	chr1_1:7893102-7893121	None:intergenic	45.0%
	GATGATGTGAGTGGAAATGG+GGG	+	chr1_1:7893132-7893151	None:intergenic	45.0%
	TTTAGAAGTGAAGGAGGAGG+AGG	+	chr1_1:7893162-7893181	None:intergenic	45.0%
	TGGTGGAAGACTTAGTGATG+GGG	+	chr1_1:7893196-7893215	None:intergenic	45.0%
!	GTGGTGGAAGACTTAGTGAT+GGG	+	chr1_1:7893197-7893216	None:intergenic	45.0%
	GAAGAATGTGACGAAGGACT+TGG	+	chr1_1:7893249-7893268	None:intergenic	45.0%
	AGTCCTTCGTCACATTCTTC+CGG	-	chr1_1:7893249-7893268	Msa0005390:CDS	45.0%
!	GAAGATTTCAAAGGTGGTGG+AGG	+	chr1_1:7893282-7893301	None:intergenic	45.0%
	GAAGGCGAAGATTTCAAAGG+TGG	+	chr1_1:7893288-7893307	None:intergenic	45.0%
	GGTGGTCCACCAATTACTTT+AGG	+	chr1_1:7893333-7893352	None:intergenic	45.0%
	GAAGCAAGTTTAGGAGGTGG+TGG	+	chr1_1:7892943-7892962	None:intergenic	50.0%
!	TTTTGTGTTGGGGGTGAAGG+AGG	+	chr1_1:7892985-7893004	None:intergenic	50.0%
!	GGATTTTGTGTTGGGGGTGA+AGG	+	chr1_1:7892988-7893007	None:intergenic	50.0%
	GTCAACAAAGGAGGAGGTGA+AGG	+	chr1_1:7893009-7893028	None:intergenic	50.0%
!	AGTGGAAAAGGGGGTGCATT+TGG	+	chr1_1:7893033-7893052	None:intergenic	50.0%
	GTTAGGAGTGGAGTAGATGG+AGG	+	chr1_1:7893069-7893088	None:intergenic	50.0%
!	GTTAATAGTGGAGGAGGTGG+AGG	+	chr1_1:7893099-7893118	None:intergenic	50.0%
	GGTGGAAGACTTAGTGATGG+GGG	+	chr1_1:7893195-7893214	None:intergenic	50.0%
!!	GGTGGTGGAAGACTTAGTGA+TGG	+	chr1_1:7893198-7893217	None:intergenic	50.0%
	GGTAGAGTCAACAATGGTGG+TGG	+	chr1_1:7893213-7893232	None:intergenic	50.0%
	GAATGTGACGAAGGACTTGG+TGG	+	chr1_1:7893246-7893265	None:intergenic	50.0%
	GTCCTTCGTCACATTCTTCC+GGG	-	chr1_1:7893250-7893269	Msa0005390:CDS	50.0%
	TCCTTCGTCACATTCTTCCG+GGG	-	chr1_1:7893251-7893270	Msa0005390:CDS	50.0%
	GGCGAAGATTTCAAAGGTGG+TGG	+	chr1_1:7893285-7893304	None:intergenic	50.0%
!!	GGAGGGTGGGGTGTTATTAG+TGG	+	chr1_1:7893051-7893070	None:intergenic	55.0%
	AGTGGAGTAGATGGAGGGTG+GGG	+	chr1_1:7893063-7893082	None:intergenic	55.0%
	GAGTGGAGTAGATGGAGGGT+GGG	+	chr1_1:7893064-7893083	None:intergenic	55.0%
!	GGAAGACTTAGTGATGGGGG+AGG	+	chr1_1:7893192-7893211	None:intergenic	55.0%
	GGCGGTAGAGTCAACAATGG+TGG	+	chr1_1:7893216-7893235	None:intergenic	55.0%
!	GGTGGCGGTAGAGTCAACAA+TGG	+	chr1_1:7893219-7893238	None:intergenic	55.0%
!!	GAAGGACTTGGTGGAGATGG+TGG	+	chr1_1:7893237-7893256	None:intergenic	55.0%
!!	GACGAAGGACTTGGTGGAGA+TGG	+	chr1_1:7893240-7893259	None:intergenic	55.0%
	TCCCCGGAAGAATGTGACGA+AGG	+	chr1_1:7893255-7893274	None:intergenic	55.0%
!	TCTTCGCCTTCTTCGGGTTC+AGG	-	chr1_1:7893297-7893316	Msa0005390:CDS	55.0%
	CCTTGACCTGAACCCGAAGA+AGG	+	chr1_1:7893306-7893325	None:intergenic	55.0%
!	CCTTCTTCGGGTTCAGGTCA+AGG	-	chr1_1:7893303-7893322	Msa0005390:CDS	55.0%
	GTGTTGGGGGTGAAGGAGGA+GGG	+	chr1_1:7892981-7893000	None:intergenic	60.0%
	TGTGTTGGGGGTGAAGGAGG+AGG	+	chr1_1:7892982-7893001	None:intergenic	60.0%
	GGAGTGGAGTAGATGGAGGG+TGG	+	chr1_1:7893065-7893084	None:intergenic	60.0%
!!	GGACTTGGTGGAGATGGTGG+CGG	+	chr1_1:7893234-7893253	None:intergenic	60.0%
!!	AGGTGGTGGAGGAGTTTCCC+CGG	+	chr1_1:7893271-7893290	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_1	gene	7892754	7893473	7892754	ID=Msa0005390;Name=Msa0005390
chr1_1	mRNA	7892754	7893473	7892754	ID=Msa0005390-mRNA-1;Parent=Msa0005390;Name=Msa0005390-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|239
chr1_1	exon	7892754	7893473	7892754	ID=Msa0005390-mRNA-1:exon:2823;Parent=Msa0005390-mRNA-1
chr1_1	CDS	7892754	7893473	7892754	ID=Msa0005390-mRNA-1:cds;Parent=Msa0005390-mRNA-1

Gene Sequence

>Msa0005390

ATGGGTCATAACAAGAATCTAGGATTCATAACAAAAAGTTGGTTTGCATGGACCACAAAAATTGTATTCATGTTGTTGGTTTTGTTTGCAAAGAGAACATTGGAGATTGAGGACAACAAAGTTGAAGAGCCTTCAAGTGGTTTATTATGCATTAGTGAATGTGTCACGTGTCCTACAATTTGTTCACCACCACCTCCTAAACTTGCTTCATCAAATTCAAATCACCCTCCTCCTTCACCCCCAACACAAAATCCTTCACCTCCTCCTTTGTTGACACCAAATGCACCCCCTTTTCCACTAATAACACCCCACCCTCCATCTACTCCACTCCTAACACAAAATCCTCCACCTCCTCCACTATTAACATCATATTCACCCCCATTTCCACTCACATCATCAAATTCTCCTCCTCCTCCTTCACTTCTAAAATCATATCCTCCCCCATCACTAAGTCTTCCACCACCATTGTTGACTCTACCGCCACCATCTCCACCAAGTCCTTCGTCACATTCTTCCGGGGAAACTCCTCCACCACCTTTGAAATCTTCGCCTTCTTCGGGTTCAGGTCAAGGACAACCTAAAGTAATTGGTGGACCACCACAAAACTATCCATATCCCTATTACTATTATTATGCCTCAAGTGCATCTCATTTTTCTAATCATGTTGTACTCTTCTTTATTGTACTTTTGTTCATTCATCAGATATTCTTTGCTTGGTAA

Protein sequence

>Msa0005390

MGHNKNLGFITKSWFAWTTKIVFMLLVLFAKRTLEIEDNKVEEPSSGLLCISECVTCPTICSPPPPKLASSNSNHPPPSPPTQNPSPPPLLTPNAPPFPLITPHPPSTPLLTQNPPPPPLLTSYSPPFPLTSSNSPPPPSLLKSYPPPSLSLPPPLLTLPPPSPPSPSSHSSGETPPPPLKSSPSSGSGQGQPKVIGGPPQNYPYPYYYYYASSASHFSNHVVLFFIVLLFIHQIFFAW*