Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453030 | sp|O81898|DEAL2_ARATH | 68.354 | 158 | 50 | 0 | 1 | 158 | 1 | 158 | 2.27e-77 | 230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453030 | G7IKM8 | 98.734 | 158 | 2 | 0 | 1 | 158 | 1 | 158 | 3.18e-109 | 317 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005390 | Msa1453030 | 0.812045 | 5.164727e-51 | -8.615850e-47 |
| Msa0006840 | Msa1453030 | 0.815487 | 9.013814e-52 | -8.615850e-47 |
| Msa0026250 | Msa1453030 | 0.819444 | 1.157624e-52 | -8.615850e-47 |
| Msa0030070 | Msa1453030 | 0.815177 | 1.056496e-51 | -8.615850e-47 |
| Msa0037660 | Msa1453030 | 0.815650 | 8.290746e-52 | -8.615850e-47 |
| Msa0038150 | Msa1453030 | -0.807446 | 5.036054e-50 | -8.615850e-47 |
| Msa0044440 | Msa1453030 | 0.802750 | 4.836569e-49 | -8.615850e-47 |
| Msa0045620 | Msa1453030 | 0.830669 | 2.578243e-55 | -8.615850e-47 |
| Msa0050530 | Msa1453030 | 0.830722 | 2.502147e-55 | -8.615850e-47 |
| Msa0053850 | Msa1453030 | 0.808867 | 2.507384e-50 | -8.615850e-47 |
| Msa0063190 | Msa1453030 | 0.810119 | 1.350596e-50 | -8.615850e-47 |
| Msa0086250 | Msa1453030 | 0.803320 | 3.687138e-49 | -8.615850e-47 |
| Msa0089540 | Msa1453030 | 0.827533 | 1.484379e-54 | -8.615850e-47 |
| Msa0099690 | Msa1453030 | 0.819009 | 1.454265e-52 | -8.615850e-47 |
| Msa0100600 | Msa1453030 | 0.813236 | 2.835514e-51 | -8.615850e-47 |
| Msa0100890 | Msa1453030 | 0.823314 | 1.480899e-53 | -8.615850e-47 |
| Msa0116620 | Msa1453030 | 0.816967 | 4.207591e-52 | -8.615850e-47 |
| Msa0116710 | Msa1453030 | 0.815448 | 9.195815e-52 | -8.615850e-47 |
| Msa1349850 | Msa1453030 | -0.800168 | 1.635579e-48 | -8.615850e-47 |
| Msa1355540 | Msa1453030 | 0.802955 | 4.387906e-49 | -8.615850e-47 |
| Msa1356450 | Msa1453030 | 0.852855 | 3.509071e-61 | -8.615850e-47 |
| Msa1362590 | Msa1453030 | 0.813160 | 2.946421e-51 | -8.615850e-47 |
| Msa1368170 | Msa1453030 | 0.820179 | 7.864661e-53 | -8.615850e-47 |
| Msa1371270 | Msa1453030 | 0.870794 | 1.114345e-66 | -8.615850e-47 |
| Msa1371800 | Msa1453030 | 0.830489 | 2.853511e-55 | -8.615850e-47 |
| Msa1372030 | Msa1453030 | 0.840913 | 6.528943e-58 | -8.615850e-47 |
| Msa1376310 | Msa1453030 | 0.834841 | 2.373790e-56 | -8.615850e-47 |
| Msa1377140 | Msa1453030 | 0.999405 | 4.668655e-309 | -8.615850e-47 |
| Msa1381800 | Msa1453030 | 0.828641 | 8.030022e-55 | -8.615850e-47 |
| Msa1385570 | Msa1453030 | 0.823999 | 1.023525e-53 | -8.615850e-47 |
| Msa1387100 | Msa1453030 | -0.813529 | 2.444391e-51 | -8.615850e-47 |
| Msa1420830 | Msa1453030 | 0.823038 | 1.717312e-53 | -8.615850e-47 |
| Msa1427600 | Msa1453030 | -0.802882 | 4.542190e-49 | -8.615850e-47 |
| Msa1430460 | Msa1453030 | -0.829409 | 5.232186e-55 | -8.615850e-47 |
| Msa0605520 | Msa1453030 | 0.838052 | 3.616323e-57 | -8.615850e-47 |
| Msa0612880 | Msa1453030 | -0.820379 | 7.076803e-53 | -8.615850e-47 |
| Msa0616230 | Msa1453030 | 0.827748 | 1.318103e-54 | -8.615850e-47 |
| Msa0623310 | Msa1453030 | 0.829080 | 6.286064e-55 | -8.615850e-47 |
| Msa0626980 | Msa1453030 | 0.804450 | 2.147942e-49 | -8.615850e-47 |
| Msa0627360 | Msa1453030 | 0.803190 | 3.923596e-49 | -8.615850e-47 |
| Msa0655710 | Msa1453030 | 0.834236 | 3.368799e-56 | -8.615850e-47 |
| Msa0657210 | Msa1453030 | 0.804538 | 2.058900e-49 | -8.615850e-47 |
| Msa0660260 | Msa1453030 | 0.835247 | 1.875664e-56 | -8.615850e-47 |
| Msa0673940 | Msa1453030 | 0.831544 | 1.571565e-55 | -8.615850e-47 |
| Msa0685610 | Msa1453030 | 0.831062 | 2.065708e-55 | -8.615850e-47 |
| Msa0688620 | Msa1453030 | 0.829467 | 5.066041e-55 | -8.615850e-47 |
| Msa0699560 | Msa1453030 | 0.826750 | 2.285754e-54 | -8.615850e-47 |
| Msa0701250 | Msa1453030 | 0.812673 | 3.767260e-51 | -8.615850e-47 |
| Msa0706690 | Msa1453030 | 0.872861 | 2.295935e-67 | -8.615850e-47 |
| Msa0749190 | Msa1453030 | 0.829931 | 3.904770e-55 | -8.615850e-47 |
| Msa0750520 | Msa1453030 | 0.832842 | 7.503884e-56 | -8.615850e-47 |
| Msa0751720 | Msa1453030 | 0.833173 | 6.207107e-56 | -8.615850e-47 |
| Msa0755480 | Msa1453030 | -0.829972 | 3.817346e-55 | -8.615850e-47 |
| Msa0761830 | Msa1453030 | 0.809544 | 1.795863e-50 | -8.615850e-47 |
| Msa0827340 | Msa1453030 | -0.812673 | 3.765898e-51 | -8.615850e-47 |
| Msa0831820 | Msa1453030 | 0.823527 | 1.320041e-53 | -8.615850e-47 |
| Msa0125590 | Msa1453030 | 0.817963 | 2.510772e-52 | -8.615850e-47 |
| Msa0130360 | Msa1453030 | 0.833098 | 6.480681e-56 | -8.615850e-47 |
| Msa0132080 | Msa1453030 | -0.811186 | 7.939221e-51 | -8.615850e-47 |
| Msa0134830 | Msa1453030 | 0.809058 | 2.282933e-50 | -8.615850e-47 |
| Msa0135230 | Msa1453030 | 0.834746 | 2.507571e-56 | -8.615850e-47 |
| Msa0145850 | Msa1453030 | 0.817718 | 2.851967e-52 | -8.615850e-47 |
| Msa0148310 | Msa1453030 | 0.843428 | 1.410127e-58 | -8.615850e-47 |
| Msa0152190 | Msa1453030 | -0.807012 | 6.221963e-50 | -8.615850e-47 |
| Msa0168380 | Msa1453030 | 0.800426 | 1.449225e-48 | -8.615850e-47 |
| Msa0173380 | Msa1453030 | 0.834794 | 2.438501e-56 | -8.615850e-47 |
| Msa0192830 | Msa1453030 | 0.825753 | 3.947980e-54 | -8.615850e-47 |
| Msa0206370 | Msa1453030 | 0.803454 | 3.459125e-49 | -8.615850e-47 |
| Msa0219840 | Msa1453030 | 0.881697 | 1.935160e-70 | -8.615850e-47 |
| Msa0221180 | Msa1453030 | 0.837135 | 6.214449e-57 | -8.615850e-47 |
| Msa0223040 | Msa1453030 | 0.803233 | 3.844848e-49 | -8.615850e-47 |
| Msa1227760 | Msa1453030 | 0.809043 | 2.299054e-50 | -8.615850e-47 |
| Msa1231440 | Msa1453030 | 0.803951 | 2.727484e-49 | -8.615850e-47 |
| Msa1231490 | Msa1453030 | 0.804978 | 1.666474e-49 | -8.615850e-47 |
| Msa1267930 | Msa1453030 | 0.812734 | 3.651703e-51 | -8.615850e-47 |
| Msa1273320 | Msa1453030 | 0.803536 | 3.326143e-49 | -8.615850e-47 |
| Msa1278000 | Msa1453030 | 0.804785 | 1.828339e-49 | -8.615850e-47 |
| Msa1278030 | Msa1453030 | 0.816105 | 6.564509e-52 | -8.615850e-47 |
| Msa1290090 | Msa1453030 | -0.809533 | 1.805378e-50 | -8.615850e-47 |
| Msa1308860 | Msa1453030 | 0.806403 | 8.366276e-50 | -8.615850e-47 |
| Msa1343460 | Msa1453030 | 0.875427 | 3.107577e-68 | -8.615850e-47 |
| Msa0372100 | Msa1453030 | 0.829384 | 5.306456e-55 | -8.615850e-47 |
| Msa0388250 | Msa1453030 | 0.800535 | 1.377207e-48 | -8.615850e-47 |
| Msa0416210 | Msa1453030 | 0.800537 | 1.376078e-48 | -8.615850e-47 |
| Msa0418100 | Msa1453030 | 0.808264 | 3.373315e-50 | -8.615850e-47 |
| Msa0427820 | Msa1453030 | 0.821637 | 3.631151e-53 | -8.615850e-47 |
| Msa0464160 | Msa1453030 | 0.803827 | 2.894267e-49 | -8.615850e-47 |
| Msa0467250 | Msa1453030 | 0.808435 | 3.101971e-50 | -8.615850e-47 |
| Msa0474060 | Msa1453030 | 0.812255 | 4.648693e-51 | -8.615850e-47 |
| Msa1026710 | Msa1453030 | 0.823039 | 1.716731e-53 | -8.615850e-47 |
| Msa1033420 | Msa1453030 | 0.809180 | 2.149120e-50 | -8.615850e-47 |
| Msa1038860 | Msa1453030 | 0.825680 | 4.107135e-54 | -8.615850e-47 |
| Msa1042300 | Msa1453030 | 0.821878 | 3.194759e-53 | -8.615850e-47 |
| Msa1057340 | Msa1453030 | -0.801129 | 1.041571e-48 | -8.615850e-47 |
| Msa1071410 | Msa1453030 | 0.832812 | 7.634836e-56 | -8.615850e-47 |
| Msa1073060 | Msa1453030 | 0.813864 | 2.062413e-51 | -8.615850e-47 |
| Msa0260980 | Msa1453030 | 0.814627 | 1.398905e-51 | -8.615850e-47 |
| Msa0262750 | Msa1453030 | 0.809692 | 1.668474e-50 | -8.615850e-47 |
| Msa0264710 | Msa1453030 | 0.803252 | 3.809518e-49 | -8.615850e-47 |
| Msa0276800 | Msa1453030 | -0.801331 | 9.471740e-49 | -8.615850e-47 |
| Msa0277320 | Msa1453030 | 0.808068 | 3.713636e-50 | -8.615850e-47 |
| Msa0291320 | Msa1453030 | 0.808929 | 2.432762e-50 | -8.615850e-47 |
| Msa0297200 | Msa1453030 | 0.935544 | 7.172886e-97 | -8.615850e-47 |
| Msa0300470 | Msa1453030 | 0.820113 | 8.143875e-53 | -8.615850e-47 |
| Msa0302750 | Msa1453030 | 0.800820 | 1.204427e-48 | -8.615850e-47 |
| Msa0336430 | Msa1453030 | 0.847088 | 1.442993e-59 | -8.615850e-47 |
| Msa0336460 | Msa1453030 | 0.848202 | 7.123782e-60 | -8.615850e-47 |
| Msa0336520 | Msa1453030 | 0.854294 | 1.354547e-61 | -8.615850e-47 |
| Msa0337970 | Msa1453030 | 0.806501 | 7.977822e-50 | -8.615850e-47 |
| Msa1127200 | Msa1453030 | 0.819606 | 1.063340e-52 | -8.615850e-47 |
| Msa1154630 | Msa1453030 | 0.828515 | 8.615539e-55 | -8.615850e-47 |
| Msa1160780 | Msa1453030 | 0.810635 | 1.045095e-50 | -8.615850e-47 |
| Msa0509630 | Msa1453030 | 0.820136 | 8.045295e-53 | -8.615850e-47 |
| Msa0513580 | Msa1453030 | -0.841826 | 3.753337e-58 | -8.615850e-47 |
| Msa0518680 | Msa1453030 | 0.810177 | 1.311987e-50 | -8.615850e-47 |
| Msa0530660 | Msa1453030 | 0.809285 | 2.040573e-50 | -8.615850e-47 |
| Msa0541740 | Msa1453030 | 0.817588 | 3.049973e-52 | -8.615850e-47 |
| Msa0541880 | Msa1453030 | 0.815563 | 8.670452e-52 | -8.615850e-47 |
| Msa0541940 | Msa1453030 | 0.807897 | 4.039063e-50 | -8.615850e-47 |
| Msa0557850 | Msa1453030 | 0.812704 | 3.708947e-51 | -8.615850e-47 |
| Msa0562360 | Msa1453030 | 0.816239 | 6.126202e-52 | -8.615850e-47 |
| Msa0564980 | Msa1453030 | 0.802520 | 5.395581e-49 | -8.615850e-47 |
| Msa0568460 | Msa1453030 | -0.803802 | 2.929048e-49 | -8.615850e-47 |
| Msa0571350 | Msa1453030 | 0.840282 | 9.553941e-58 | -8.615850e-47 |
| Msa0575950 | Msa1453030 | 0.801065 | 1.073269e-48 | -8.615850e-47 |
| Msa0587180 | Msa1453030 | 0.829168 | 5.987191e-55 | -8.615850e-47 |
| Msa0598470 | Msa1453030 | -0.801407 | 9.138150e-49 | -8.615850e-47 |
| Msa0847140 | Msa1453030 | 0.811749 | 5.992635e-51 | -8.615850e-47 |
| Msa0848670 | Msa1453030 | -0.804025 | 2.632540e-49 | -8.615850e-47 |
| Msa0856220 | Msa1453030 | 0.831878 | 1.300524e-55 | -8.615850e-47 |
| Msa0876630 | Msa1453030 | 0.823270 | 1.516420e-53 | -8.615850e-47 |
| Msa0921340 | Msa1453030 | 0.806262 | 8.960992e-50 | -8.615850e-47 |
| Msa0929900 | Msa1453030 | 0.813826 | 2.102581e-51 | -8.615850e-47 |
| Msa0970040 | Msa1453030 | 0.819382 | 1.196193e-52 | -8.615850e-47 |
| Msa0978980 | Msa1453030 | 0.845040 | 5.203686e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453030 | MtrunA17_Chr2g0323081 | 98.734 | 158 | 2 | 0 | 1 | 158 | 1 | 158 | 6.12e-113 | 317 |
| Msa1453030 | MtrunA17_Chr4g0023621 | 70.253 | 158 | 47 | 0 | 1 | 158 | 1 | 158 | 4.94e-80 | 234 |
| Msa1453030 | MtrunA17_Chr4g0049001 | 60.127 | 158 | 63 | 0 | 1 | 158 | 1 | 158 | 4.49e-71 | 211 |
| Msa1453030 | MtrunA17_Chr2g0280491 | 60.127 | 158 | 63 | 0 | 1 | 158 | 1 | 158 | 9.86e-62 | 188 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1453030 | AT4G21310.1 | 68.354 | 158 | 50 | 0 | 1 | 158 | 1 | 158 | 2.30e-78 | 230 |
| Msa1453030 | AT2G32280.1 | 62.025 | 158 | 60 | 0 | 1 | 158 | 1 | 158 | 1.43e-71 | 213 |
| Msa1453030 | AT2G32280.2 | 62.025 | 158 | 60 | 0 | 1 | 158 | 1 | 158 | 1.43e-71 | 213 |
| Msa1453030 | AT4G21310.2 | 65.000 | 120 | 42 | 0 | 39 | 158 | 1 | 120 | 2.12e-54 | 168 |
| Msa1453030 | AT1G11500.1 | 41.212 | 165 | 90 | 1 | 1 | 158 | 1 | 165 | 5.10e-36 | 123 |
| Msa1453030 | AT1G11500.3 | 41.212 | 165 | 90 | 1 | 1 | 158 | 6 | 170 | 6.81e-36 | 123 |
| Msa1453030 | AT1G11500.2 | 43.860 | 114 | 64 | 0 | 45 | 158 | 24 | 137 | 1.96e-27 | 100 |
| Msa1453030 | AT1G05291.1 | 38.776 | 147 | 83 | 3 | 12 | 155 | 23 | 165 | 1.49e-23 | 92.0 |
Find 60 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTTACTCTACTTGTACTA+TGG | 0.146899 | tig0034453:+22066 | Msa1453030:three_prime_UTR |
| ATTTAGTAAAGCAACAAATT+TGG | 0.256307 | tig0034453:-22029 | None:intergenic |
| AGTCATAAGGCCTTCATGTT+TGG | 0.331948 | tig0034453:+21308 | Msa1453030:CDS |
| CTTTCATTGGACAATGACTT+TGG | 0.342392 | tig0034453:-22209 | None:intergenic |
| GATGTCACAGCTGGGATTCT+TGG | 0.346927 | tig0034453:+20938 | Msa1453030:CDS |
| ACCGCAGCCACCTAGCAAAT+TGG | 0.354925 | tig0034453:-21372 | None:intergenic |
| GTAGAAAGATCTATAATCTA+TGG | 0.358121 | tig0034453:-22243 | None:intergenic |
| GCCATTGAGAGTTGCCTATT+GGG | 0.372087 | tig0034453:-21431 | None:intergenic |
| GGCCATTGAGAGTTGCCTAT+TGG | 0.393490 | tig0034453:-21432 | None:intergenic |
| ATGTCTCTTGATTGTTATCA+TGG | 0.396765 | tig0034453:+20916 | Msa1453030:CDS |
| GGTAATCTAAAATCTTTCAT+TGG | 0.398016 | tig0034453:-22222 | None:intergenic |
| GGATTGAGCATGTTGGTGAT+AGG | 0.405472 | tig0034453:+21800 | Msa1453030:CDS |
| GAAATTAATTCTCTCAGAAA+TGG | 0.412103 | tig0034453:+20871 | Msa1453030:exon |
| TTCCTTAGTCACTAATTAAG+AGG | 0.431827 | tig0034453:-21948 | None:intergenic |
| GTTGTTGATCAGGATTGTTT+TGG | 0.434468 | tig0034453:+21772 | Msa1453030:intron |
| ATTTACTCTACTTGTACTAT+GGG | 0.442797 | tig0034453:+22067 | Msa1453030:three_prime_UTR |
| TACACATGTCAGTGGATTAG+TGG | 0.447914 | tig0034453:-22136 | None:intergenic |
| GACCATCACTTTCTATCCAT+TGG | 0.452040 | tig0034453:+21866 | Msa1453030:CDS |
| CACAAAAGCAAGAGCAGAAG+TGG | 0.467268 | tig0034453:-21987 | None:intergenic |
| GCCAATTTGCTAGGTGGCTG+CGG | 0.471857 | tig0034453:+21371 | Msa1453030:CDS |
| ACCCAATAGGCAACTCTCAA+TGG | 0.473987 | tig0034453:+21430 | Msa1453030:CDS |
| TGCCTCTTAATTAGTGACTA+AGG | 0.478388 | tig0034453:+21946 | Msa1453030:exon |
| GACTAAGGAAACACATAGAA+TGG | 0.481433 | tig0034453:+21961 | Msa1453030:three_prime_UTR |
| TTCAAAAGTCTTCACCCAAT+AGG | 0.481487 | tig0034453:+21417 | Msa1453030:CDS |
| GTTATCATGGATGTCACAGC+TGG | 0.486047 | tig0034453:+20929 | Msa1453030:CDS |
| TCAGAAATGGCTAGAGAAGT+TGG | 0.488463 | tig0034453:+20884 | Msa1453030:exon |
| TTGGTAAAGAAAAGCATACT+TGG | 0.490894 | tig0034453:+20842 | Msa1453030:five_prime_UTR |
| TCTCTTTCTTAGCTAGCACT+TGG | 0.498790 | tig0034453:+20823 | Msa1453030:five_prime_UTR |
| AGTAGAGTAAATAAATGTCT+TGG | 0.506117 | tig0034453:-22056 | None:intergenic |
| AGGTTAAACACTTGAGATTG+TGG | 0.506672 | tig0034453:+21264 | Msa1453030:intron |
| ATCACTTTCTATCCATTGGT+GGG | 0.512449 | tig0034453:+21870 | Msa1453030:CDS |
| AACATGAAGGCCTTATGACT+TGG | 0.519268 | tig0034453:-21305 | None:intergenic |
| CATGTTATAGCCAATTTGCT+AGG | 0.526723 | tig0034453:+21362 | Msa1453030:CDS |
| GTGTAGAGATCCAAGTCATA+AGG | 0.530738 | tig0034453:+21295 | Msa1453030:CDS |
| AAGAAACTAAATTAGAATTG+TGG | 0.537544 | tig0034453:-22170 | None:intergenic |
| GATTGAGCATGTTGGTGATA+GGG | 0.548783 | tig0034453:+21801 | Msa1453030:CDS |
| ATGTCAGTGGATTAGTGGAT+AGG | 0.552511 | tig0034453:-22131 | None:intergenic |
| CATCACTTTCTATCCATTGG+TGG | 0.556658 | tig0034453:+21869 | Msa1453030:CDS |
| TAAATTAAAATAGTCCATCA+TGG | 0.558416 | tig0034453:-22303 | None:intergenic |
| GGCTGTTGGATTGAGCATGT+TGG | 0.561637 | tig0034453:+21793 | Msa1453030:CDS |
| AAAACAAACAACAGATCAAG+TGG | 0.563378 | tig0034453:+21827 | Msa1453030:CDS |
| AATATATATCAAAACAATCG+TGG | 0.565043 | tig0034453:-20777 | None:intergenic |
| CTAGCAAATTGGCTATAACA+TGG | 0.567612 | tig0034453:-21361 | None:intergenic |
| AGTCACTAATTAAGAGGCAG+TGG | 0.571955 | tig0034453:-21942 | None:intergenic |
| TATATTACCATGTTAAAATG+AGG | 0.574693 | tig0034453:-21457 | None:intergenic |
| AAAACACAAAATCCCACCAA+TGG | 0.578066 | tig0034453:-21882 | None:intergenic |
| ATATATATCAAAACAATCGT+GGG | 0.587676 | tig0034453:-20776 | None:intergenic |
| TAGCAAATTGGCTATAACAT+GGG | 0.592154 | tig0034453:-21360 | None:intergenic |
| AGCTGAAATTGCTCAAAACA+AGG | 0.596775 | tig0034453:+20967 | Msa1453030:CDS |
| TTACCATGTTAAAATGAGGA+TGG | 0.599472 | tig0034453:-21453 | None:intergenic |
| TGCAGCTAATCCAAACATGA+AGG | 0.600785 | tig0034453:-21318 | None:intergenic |
| AACAGATCAAGTGGTACTTG+TGG | 0.611029 | tig0034453:+21836 | Msa1453030:CDS |
| GTTATAGCCAATTTGCTAGG+TGG | 0.649884 | tig0034453:+21365 | Msa1453030:CDS |
| TTTACTCTACTTGTACTATG+GGG | 0.650853 | tig0034453:+22068 | Msa1453030:three_prime_UTR |
| TTATCATGGATGTCACAGCT+GGG | 0.651085 | tig0034453:+20930 | Msa1453030:CDS |
| AACTAAATTAGAATTGTGGT+AGG | 0.658381 | tig0034453:-22166 | None:intergenic |
| GCACACACTACACATGTCAG+TGG | 0.658680 | tig0034453:-22144 | None:intergenic |
| AAGAAACACAGAATAGACCA+TGG | 0.662268 | tig0034453:-21907 | None:intergenic |
| CACCAATGGATAGAAAGTGA+TGG | 0.663881 | tig0034453:-21868 | None:intergenic |
| TAAGGAAACACATAGAATGG+AGG | 0.696438 | tig0034453:+21964 | Msa1453030:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTATTTTACAAAATC+AGG | + | tig0034453:21244-21263 | Msa1453030:intron | 10.0% |
| !! | TTTGATAAACATTTAAAAAT+GGG | - | tig0034453:22107-22126 | None:intergenic | 10.0% |
| !! | ATTTGATAAACATTTAAAAA+TGG | - | tig0034453:22108-22127 | None:intergenic | 10.0% |
| !!! | TTATTTTATTTTACAAAATC+AGG | + | tig0034453:21244-21263 | Msa1453030:intron | 10.0% |
| !! | TTTGATAAACATTTAAAAAT+GGG | - | tig0034453:22107-22126 | None:intergenic | 10.0% |
| !! | ATTTGATAAACATTTAAAAA+TGG | - | tig0034453:22108-22127 | None:intergenic | 10.0% |
| !! | AAAATTAATGTACATTATCA+TGG | - | tig0034453:21168-21187 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTAATACCATGA+TGG | + | tig0034453:22289-22308 | Msa1453030:three_prime_UTR | 15.0% |
| !! | AAAATTAATGTACATTATCA+TGG | - | tig0034453:21168-21187 | None:intergenic | 15.0% |
| !!! | ATTTTATTTTAATACCATGA+TGG | + | tig0034453:22289-22308 | Msa1453030:three_prime_UTR | 15.0% |
| !! | ATATATATCAAAACAATCGT+GGG | - | tig0034453:20779-20798 | None:intergenic | 20.0% |
| !! | AATATATATCAAAACAATCG+TGG | - | tig0034453:20780-20799 | None:intergenic | 20.0% |
| !!! | GTTTTATAGAATTAGAAACA+TGG | - | tig0034453:21012-21031 | None:intergenic | 20.0% |
| !! | TATATTACCATGTTAAAATG+AGG | - | tig0034453:21460-21479 | None:intergenic | 20.0% |
| !!! | AAATTCAGTGTTTTAAAAAC+CGG | - | tig0034453:21676-21695 | None:intergenic | 20.0% |
| !! | ATTTAGTAAAGCAACAAATT+TGG | - | tig0034453:22032-22051 | None:intergenic | 20.0% |
| !! | AAGAAACTAAATTAGAATTG+TGG | - | tig0034453:22173-22192 | None:intergenic | 20.0% |
| !! | ATATATATCAAAACAATCGT+GGG | - | tig0034453:20779-20798 | None:intergenic | 20.0% |
| !! | AATATATATCAAAACAATCG+TGG | - | tig0034453:20780-20799 | None:intergenic | 20.0% |
| !!! | GTTTTATAGAATTAGAAACA+TGG | - | tig0034453:21012-21031 | None:intergenic | 20.0% |
| !! | TATATTACCATGTTAAAATG+AGG | - | tig0034453:21460-21479 | None:intergenic | 20.0% |
| !!! | AAATTCAGTGTTTTAAAAAC+CGG | - | tig0034453:21676-21695 | None:intergenic | 20.0% |
| !! | ATTTAGTAAAGCAACAAATT+TGG | - | tig0034453:22032-22051 | None:intergenic | 20.0% |
| !! | AAGAAACTAAATTAGAATTG+TGG | - | tig0034453:22173-22192 | None:intergenic | 20.0% |
| ! | GAAATTAATTCTCTCAGAAA+TGG | + | tig0034453:20871-20890 | Msa1453030:exon | 25.0% |
| ! | TCAATCACAGTACAATTATT+AGG | - | tig0034453:21126-21145 | None:intergenic | 25.0% |
| ! | CAACAACGTAATTAAAACAA+TGG | - | tig0034453:21759-21778 | None:intergenic | 25.0% |
| !!! | TTTTAATTACGTTGTTGATC+AGG | + | tig0034453:21762-21781 | Msa1453030:intron | 25.0% |
| ! | AGTAGAGTAAATAAATGTCT+TGG | - | tig0034453:22059-22078 | None:intergenic | 25.0% |
| ! | TATTTACTCTACTTGTACTA+TGG | + | tig0034453:22066-22085 | Msa1453030:three_prime_UTR | 25.0% |
| ! | ATTTACTCTACTTGTACTAT+GGG | + | tig0034453:22067-22086 | Msa1453030:three_prime_UTR | 25.0% |
| ! | AACTAAATTAGAATTGTGGT+AGG | - | tig0034453:22169-22188 | None:intergenic | 25.0% |
| !! | GGTAATCTAAAATCTTTCAT+TGG | - | tig0034453:22225-22244 | None:intergenic | 25.0% |
| ! | GTAGAAAGATCTATAATCTA+TGG | - | tig0034453:22246-22265 | None:intergenic | 25.0% |
| ! | GAAATTAATTCTCTCAGAAA+TGG | + | tig0034453:20871-20890 | Msa1453030:exon | 25.0% |
| ! | TCAATCACAGTACAATTATT+AGG | - | tig0034453:21126-21145 | None:intergenic | 25.0% |
| ! | CAACAACGTAATTAAAACAA+TGG | - | tig0034453:21759-21778 | None:intergenic | 25.0% |
| !!! | TTTTAATTACGTTGTTGATC+AGG | + | tig0034453:21762-21781 | Msa1453030:intron | 25.0% |
| ! | AGTAGAGTAAATAAATGTCT+TGG | - | tig0034453:22059-22078 | None:intergenic | 25.0% |
| ! | TATTTACTCTACTTGTACTA+TGG | + | tig0034453:22066-22085 | Msa1453030:three_prime_UTR | 25.0% |
| ! | ATTTACTCTACTTGTACTAT+GGG | + | tig0034453:22067-22086 | Msa1453030:three_prime_UTR | 25.0% |
| ! | AACTAAATTAGAATTGTGGT+AGG | - | tig0034453:22169-22188 | None:intergenic | 25.0% |
| !! | GGTAATCTAAAATCTTTCAT+TGG | - | tig0034453:22225-22244 | None:intergenic | 25.0% |
| ! | GTAGAAAGATCTATAATCTA+TGG | - | tig0034453:22246-22265 | None:intergenic | 25.0% |
| ! | TTGGTAAAGAAAAGCATACT+TGG | + | tig0034453:20842-20861 | Msa1453030:five_prime_UTR | 30.0% |
| ATGTCTCTTGATTGTTATCA+TGG | + | tig0034453:20916-20935 | Msa1453030:CDS | 30.0% | |
| TAGCAAATTGGCTATAACAT+GGG | - | tig0034453:21363-21382 | None:intergenic | 30.0% | |
| TTACCATGTTAAAATGAGGA+TGG | - | tig0034453:21456-21475 | None:intergenic | 30.0% | |
| GAAAACAAGTAGAGGAATTA+GGG | - | tig0034453:21484-21503 | None:intergenic | 30.0% | |
| TTCAACTGCTTACAAAACTA+TGG | - | tig0034453:21600-21619 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGTAAGCAGTTGAA+CGG | + | tig0034453:21600-21619 | Msa1453030:intron | 30.0% |
| ACCATGATAAAAAGTTCCAT+TGG | + | tig0034453:21637-21656 | Msa1453030:intron | 30.0% | |
| ! | ACCAATGGAACTTTTTATCA+TGG | - | tig0034453:21641-21660 | None:intergenic | 30.0% |
| CATTTATTAGTGAACTCTCA+TGG | - | tig0034453:21723-21742 | None:intergenic | 30.0% | |
| AAAACAAACAACAGATCAAG+TGG | + | tig0034453:21827-21846 | Msa1453030:CDS | 30.0% | |
| TTCCTTAGTCACTAATTAAG+AGG | - | tig0034453:21951-21970 | None:intergenic | 30.0% | |
| TTTACTCTACTTGTACTATG+GGG | + | tig0034453:22068-22087 | Msa1453030:three_prime_UTR | 30.0% | |
| ! | TTGGTAAAGAAAAGCATACT+TGG | + | tig0034453:20842-20861 | Msa1453030:five_prime_UTR | 30.0% |
| ATGTCTCTTGATTGTTATCA+TGG | + | tig0034453:20916-20935 | Msa1453030:CDS | 30.0% | |
| TAGCAAATTGGCTATAACAT+GGG | - | tig0034453:21363-21382 | None:intergenic | 30.0% | |
| TTACCATGTTAAAATGAGGA+TGG | - | tig0034453:21456-21475 | None:intergenic | 30.0% | |
| GAAAACAAGTAGAGGAATTA+GGG | - | tig0034453:21484-21503 | None:intergenic | 30.0% | |
| TTCAACTGCTTACAAAACTA+TGG | - | tig0034453:21600-21619 | None:intergenic | 30.0% | |
| !!! | TAGTTTTGTAAGCAGTTGAA+CGG | + | tig0034453:21600-21619 | Msa1453030:intron | 30.0% |
| ACCATGATAAAAAGTTCCAT+TGG | + | tig0034453:21637-21656 | Msa1453030:intron | 30.0% | |
| ! | ACCAATGGAACTTTTTATCA+TGG | - | tig0034453:21641-21660 | None:intergenic | 30.0% |
| CATTTATTAGTGAACTCTCA+TGG | - | tig0034453:21723-21742 | None:intergenic | 30.0% | |
| AAAACAAACAACAGATCAAG+TGG | + | tig0034453:21827-21846 | Msa1453030:CDS | 30.0% | |
| TTCCTTAGTCACTAATTAAG+AGG | - | tig0034453:21951-21970 | None:intergenic | 30.0% | |
| TTTACTCTACTTGTACTATG+GGG | + | tig0034453:22068-22087 | Msa1453030:three_prime_UTR | 30.0% | |
| AGCTGAAATTGCTCAAAACA+AGG | + | tig0034453:20967-20986 | Msa1453030:CDS | 35.0% | |
| AGGTTAAACACTTGAGATTG+TGG | + | tig0034453:21264-21283 | Msa1453030:intron | 35.0% | |
| CTAGCAAATTGGCTATAACA+TGG | - | tig0034453:21364-21383 | None:intergenic | 35.0% | |
| ! | CATGTTATAGCCAATTTGCT+AGG | + | tig0034453:21362-21381 | Msa1453030:CDS | 35.0% |
| TTCAAAAGTCTTCACCCAAT+AGG | + | tig0034453:21417-21436 | Msa1453030:CDS | 35.0% | |
| CGAAAACAAGTAGAGGAATT+AGG | - | tig0034453:21485-21504 | None:intergenic | 35.0% | |
| ACATTGTCGAAAACAAGTAG+AGG | - | tig0034453:21492-21511 | None:intergenic | 35.0% | |
| ! | TGTCTAGGGTTTGGTTATTT+AGG | + | tig0034453:21566-21585 | Msa1453030:intron | 35.0% |
| !! | CATTGGTTCAATATTCAGTC+CGG | + | tig0034453:21654-21673 | Msa1453030:intron | 35.0% |
| ! | GTTGTTGATCAGGATTGTTT+TGG | + | tig0034453:21772-21791 | Msa1453030:intron | 35.0% |
| ATCACTTTCTATCCATTGGT+GGG | + | tig0034453:21870-21889 | Msa1453030:CDS | 35.0% | |
| AAAACACAAAATCCCACCAA+TGG | - | tig0034453:21885-21904 | None:intergenic | 35.0% | |
| AAGAAACACAGAATAGACCA+TGG | - | tig0034453:21910-21929 | None:intergenic | 35.0% | |
| TGCCTCTTAATTAGTGACTA+AGG | + | tig0034453:21946-21965 | Msa1453030:exon | 35.0% | |
| GACTAAGGAAACACATAGAA+TGG | + | tig0034453:21961-21980 | Msa1453030:three_prime_UTR | 35.0% | |
| TAAGGAAACACATAGAATGG+AGG | + | tig0034453:21964-21983 | Msa1453030:three_prime_UTR | 35.0% | |
| !!! | GCTTTTGTGCTTTAGGAATT+TGG | + | tig0034453:22001-22020 | Msa1453030:three_prime_UTR | 35.0% |
| CTTTCATTGGACAATGACTT+TGG | - | tig0034453:22212-22231 | None:intergenic | 35.0% | |
| AGCTGAAATTGCTCAAAACA+AGG | + | tig0034453:20967-20986 | Msa1453030:CDS | 35.0% | |
| AGGTTAAACACTTGAGATTG+TGG | + | tig0034453:21264-21283 | Msa1453030:intron | 35.0% | |
| CTAGCAAATTGGCTATAACA+TGG | - | tig0034453:21364-21383 | None:intergenic | 35.0% | |
| ! | CATGTTATAGCCAATTTGCT+AGG | + | tig0034453:21362-21381 | Msa1453030:CDS | 35.0% |
| TTCAAAAGTCTTCACCCAAT+AGG | + | tig0034453:21417-21436 | Msa1453030:CDS | 35.0% | |
| CGAAAACAAGTAGAGGAATT+AGG | - | tig0034453:21485-21504 | None:intergenic | 35.0% | |
| ACATTGTCGAAAACAAGTAG+AGG | - | tig0034453:21492-21511 | None:intergenic | 35.0% | |
| ! | TGTCTAGGGTTTGGTTATTT+AGG | + | tig0034453:21566-21585 | Msa1453030:intron | 35.0% |
| !! | CATTGGTTCAATATTCAGTC+CGG | + | tig0034453:21654-21673 | Msa1453030:intron | 35.0% |
| ! | GTTGTTGATCAGGATTGTTT+TGG | + | tig0034453:21772-21791 | Msa1453030:intron | 35.0% |
| ATCACTTTCTATCCATTGGT+GGG | + | tig0034453:21870-21889 | Msa1453030:CDS | 35.0% | |
| AAAACACAAAATCCCACCAA+TGG | - | tig0034453:21885-21904 | None:intergenic | 35.0% | |
| AAGAAACACAGAATAGACCA+TGG | - | tig0034453:21910-21929 | None:intergenic | 35.0% | |
| TGCCTCTTAATTAGTGACTA+AGG | + | tig0034453:21946-21965 | Msa1453030:exon | 35.0% | |
| GACTAAGGAAACACATAGAA+TGG | + | tig0034453:21961-21980 | Msa1453030:three_prime_UTR | 35.0% | |
| TAAGGAAACACATAGAATGG+AGG | + | tig0034453:21964-21983 | Msa1453030:three_prime_UTR | 35.0% | |
| !!! | GCTTTTGTGCTTTAGGAATT+TGG | + | tig0034453:22001-22020 | Msa1453030:three_prime_UTR | 35.0% |
| CTTTCATTGGACAATGACTT+TGG | - | tig0034453:22212-22231 | None:intergenic | 35.0% | |
| TCTCTTTCTTAGCTAGCACT+TGG | + | tig0034453:20823-20842 | Msa1453030:five_prime_UTR | 40.0% | |
| TCAGAAATGGCTAGAGAAGT+TGG | + | tig0034453:20884-20903 | Msa1453030:exon | 40.0% | |
| TTATCATGGATGTCACAGCT+GGG | + | tig0034453:20930-20949 | Msa1453030:CDS | 40.0% | |
| GTGTAGAGATCCAAGTCATA+AGG | + | tig0034453:21295-21314 | Msa1453030:CDS | 40.0% | |
| ! | AACATGAAGGCCTTATGACT+TGG | - | tig0034453:21308-21327 | None:intergenic | 40.0% |
| AGTCATAAGGCCTTCATGTT+TGG | + | tig0034453:21308-21327 | Msa1453030:CDS | 40.0% | |
| TGCAGCTAATCCAAACATGA+AGG | - | tig0034453:21321-21340 | None:intergenic | 40.0% | |
| !! | GTTATAGCCAATTTGCTAGG+TGG | + | tig0034453:21365-21384 | Msa1453030:CDS | 40.0% |
| !! | TGGCCATCCTCATTTTAACA+TGG | + | tig0034453:21450-21469 | Msa1453030:CDS | 40.0% |
| AGCAGTTGAACGGTTTAAAG+AGG | + | tig0034453:21610-21629 | Msa1453030:intron | 40.0% | |
| CGGACTGAATATTGAACCAA+TGG | - | tig0034453:21656-21675 | None:intergenic | 40.0% | |
| !!! | ATCAGGATTGTTTTGGCTGT+TGG | + | tig0034453:21779-21798 | Msa1453030:intron | 40.0% |
| !! | GATTGAGCATGTTGGTGATA+GGG | + | tig0034453:21801-21820 | Msa1453030:CDS | 40.0% |
| AACAGATCAAGTGGTACTTG+TGG | + | tig0034453:21836-21855 | Msa1453030:CDS | 40.0% | |
| GACCATCACTTTCTATCCAT+TGG | + | tig0034453:21866-21885 | Msa1453030:CDS | 40.0% | |
| CACCAATGGATAGAAAGTGA+TGG | - | tig0034453:21871-21890 | None:intergenic | 40.0% | |
| CATCACTTTCTATCCATTGG+TGG | + | tig0034453:21869-21888 | Msa1453030:CDS | 40.0% | |
| ! | GGGATTTTGTGTTTTGTCCA+TGG | + | tig0034453:21890-21909 | Msa1453030:CDS | 40.0% |
| AGTCACTAATTAAGAGGCAG+TGG | - | tig0034453:21945-21964 | None:intergenic | 40.0% | |
| !! | TGCTCTTGCTTTTGTGCTTT+AGG | + | tig0034453:21994-22013 | Msa1453030:three_prime_UTR | 40.0% |
| !! | ATGTCAGTGGATTAGTGGAT+AGG | - | tig0034453:22134-22153 | None:intergenic | 40.0% |
| !! | TACACATGTCAGTGGATTAG+TGG | - | tig0034453:22139-22158 | None:intergenic | 40.0% |
| TCTCTTTCTTAGCTAGCACT+TGG | + | tig0034453:20823-20842 | Msa1453030:five_prime_UTR | 40.0% | |
| TCAGAAATGGCTAGAGAAGT+TGG | + | tig0034453:20884-20903 | Msa1453030:exon | 40.0% | |
| TTATCATGGATGTCACAGCT+GGG | + | tig0034453:20930-20949 | Msa1453030:CDS | 40.0% | |
| GTGTAGAGATCCAAGTCATA+AGG | + | tig0034453:21295-21314 | Msa1453030:CDS | 40.0% | |
| ! | AACATGAAGGCCTTATGACT+TGG | - | tig0034453:21308-21327 | None:intergenic | 40.0% |
| AGTCATAAGGCCTTCATGTT+TGG | + | tig0034453:21308-21327 | Msa1453030:CDS | 40.0% | |
| TGCAGCTAATCCAAACATGA+AGG | - | tig0034453:21321-21340 | None:intergenic | 40.0% | |
| !! | GTTATAGCCAATTTGCTAGG+TGG | + | tig0034453:21365-21384 | Msa1453030:CDS | 40.0% |
| !! | TGGCCATCCTCATTTTAACA+TGG | + | tig0034453:21450-21469 | Msa1453030:CDS | 40.0% |
| AGCAGTTGAACGGTTTAAAG+AGG | + | tig0034453:21610-21629 | Msa1453030:intron | 40.0% | |
| CGGACTGAATATTGAACCAA+TGG | - | tig0034453:21656-21675 | None:intergenic | 40.0% | |
| !!! | ATCAGGATTGTTTTGGCTGT+TGG | + | tig0034453:21779-21798 | Msa1453030:intron | 40.0% |
| !! | GATTGAGCATGTTGGTGATA+GGG | + | tig0034453:21801-21820 | Msa1453030:CDS | 40.0% |
| AACAGATCAAGTGGTACTTG+TGG | + | tig0034453:21836-21855 | Msa1453030:CDS | 40.0% | |
| GACCATCACTTTCTATCCAT+TGG | + | tig0034453:21866-21885 | Msa1453030:CDS | 40.0% | |
| CACCAATGGATAGAAAGTGA+TGG | - | tig0034453:21871-21890 | None:intergenic | 40.0% | |
| CATCACTTTCTATCCATTGG+TGG | + | tig0034453:21869-21888 | Msa1453030:CDS | 40.0% | |
| ! | GGGATTTTGTGTTTTGTCCA+TGG | + | tig0034453:21890-21909 | Msa1453030:CDS | 40.0% |
| AGTCACTAATTAAGAGGCAG+TGG | - | tig0034453:21945-21964 | None:intergenic | 40.0% | |
| !! | TGCTCTTGCTTTTGTGCTTT+AGG | + | tig0034453:21994-22013 | Msa1453030:three_prime_UTR | 40.0% |
| !! | ATGTCAGTGGATTAGTGGAT+AGG | - | tig0034453:22134-22153 | None:intergenic | 40.0% |
| !! | TACACATGTCAGTGGATTAG+TGG | - | tig0034453:22139-22158 | None:intergenic | 40.0% |
| GTTATCATGGATGTCACAGC+TGG | + | tig0034453:20929-20948 | Msa1453030:CDS | 45.0% | |
| ACCCAATAGGCAACTCTCAA+TGG | + | tig0034453:21430-21449 | Msa1453030:CDS | 45.0% | |
| GCCATTGAGAGTTGCCTATT+GGG | - | tig0034453:21434-21453 | None:intergenic | 45.0% | |
| ACTATGAAACCGCACTGTCT+AGG | + | tig0034453:21551-21570 | Msa1453030:intron | 45.0% | |
| CTATGAAACCGCACTGTCTA+GGG | + | tig0034453:21552-21571 | Msa1453030:intron | 45.0% | |
| TAACCAAACCCTAGACAGTG+CGG | - | tig0034453:21563-21582 | None:intergenic | 45.0% | |
| !! | GGATTGAGCATGTTGGTGAT+AGG | + | tig0034453:21800-21819 | Msa1453030:CDS | 45.0% |
| CACAAAAGCAAGAGCAGAAG+TGG | - | tig0034453:21990-22009 | None:intergenic | 45.0% | |
| GTTATCATGGATGTCACAGC+TGG | + | tig0034453:20929-20948 | Msa1453030:CDS | 45.0% | |
| ACCCAATAGGCAACTCTCAA+TGG | + | tig0034453:21430-21449 | Msa1453030:CDS | 45.0% | |
| GCCATTGAGAGTTGCCTATT+GGG | - | tig0034453:21434-21453 | None:intergenic | 45.0% | |
| ACTATGAAACCGCACTGTCT+AGG | + | tig0034453:21551-21570 | Msa1453030:intron | 45.0% | |
| CTATGAAACCGCACTGTCTA+GGG | + | tig0034453:21552-21571 | Msa1453030:intron | 45.0% | |
| TAACCAAACCCTAGACAGTG+CGG | - | tig0034453:21563-21582 | None:intergenic | 45.0% | |
| !! | GGATTGAGCATGTTGGTGAT+AGG | + | tig0034453:21800-21819 | Msa1453030:CDS | 45.0% |
| CACAAAAGCAAGAGCAGAAG+TGG | - | tig0034453:21990-22009 | None:intergenic | 45.0% | |
| GATGTCACAGCTGGGATTCT+TGG | + | tig0034453:20938-20957 | Msa1453030:CDS | 50.0% | |
| GGCCATTGAGAGTTGCCTAT+TGG | - | tig0034453:21435-21454 | None:intergenic | 50.0% | |
| ! | AAACCGCACTGTCTAGGGTT+TGG | + | tig0034453:21557-21576 | Msa1453030:intron | 50.0% |
| GGCTGTTGGATTGAGCATGT+TGG | + | tig0034453:21793-21812 | Msa1453030:CDS | 50.0% | |
| GCACACACTACACATGTCAG+TGG | - | tig0034453:22147-22166 | None:intergenic | 50.0% | |
| GATGTCACAGCTGGGATTCT+TGG | + | tig0034453:20938-20957 | Msa1453030:CDS | 50.0% | |
| GGCCATTGAGAGTTGCCTAT+TGG | - | tig0034453:21435-21454 | None:intergenic | 50.0% | |
| ! | AAACCGCACTGTCTAGGGTT+TGG | + | tig0034453:21557-21576 | Msa1453030:intron | 50.0% |
| GGCTGTTGGATTGAGCATGT+TGG | + | tig0034453:21793-21812 | Msa1453030:CDS | 50.0% | |
| GCACACACTACACATGTCAG+TGG | - | tig0034453:22147-22166 | None:intergenic | 50.0% | |
| !! | GCCAATTTGCTAGGTGGCTG+CGG | + | tig0034453:21371-21390 | Msa1453030:CDS | 55.0% |
| ACCGCAGCCACCTAGCAAAT+TGG | - | tig0034453:21375-21394 | None:intergenic | 55.0% | |
| !! | GCCAATTTGCTAGGTGGCTG+CGG | + | tig0034453:21371-21390 | Msa1453030:CDS | 55.0% |
| ACCGCAGCCACCTAGCAAAT+TGG | - | tig0034453:21375-21394 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0034453 | gene | 20728 | 22319 | 20728 | ID=Msa1453030;Name=Msa1453030 |
| tig0034453 | mRNA | 20728 | 22319 | 20728 | ID=Msa1453030-mRNA-1;Parent=Msa1453030;Name=Msa1453030-mRNA-1;_AED=0.04;_eAED=0.04;_QI=162|1|1|1|1|1|3|364|158 |
| tig0034453 | exon | 20728 | 20988 | 20728 | ID=Msa1453030-mRNA-1:exon:18964;Parent=Msa1453030-mRNA-1 |
| tig0034453 | exon | 21266 | 21471 | 21266 | ID=Msa1453030-mRNA-1:exon:18965;Parent=Msa1453030-mRNA-1 |
| tig0034453 | exon | 21784 | 22319 | 21784 | ID=Msa1453030-mRNA-1:exon:18966;Parent=Msa1453030-mRNA-1 |
| tig0034453 | five_prime_UTR | 20728 | 20889 | 20728 | ID=Msa1453030-mRNA-1:five_prime_utr;Parent=Msa1453030-mRNA-1 |
| tig0034453 | CDS | 20890 | 20988 | 20890 | ID=Msa1453030-mRNA-1:cds;Parent=Msa1453030-mRNA-1 |
| tig0034453 | CDS | 21266 | 21471 | 21266 | ID=Msa1453030-mRNA-1:cds;Parent=Msa1453030-mRNA-1 |
| tig0034453 | CDS | 21784 | 21955 | 21784 | ID=Msa1453030-mRNA-1:cds;Parent=Msa1453030-mRNA-1 |
| tig0034453 | three_prime_UTR | 21956 | 22319 | 21956 | ID=Msa1453030-mRNA-1:three_prime_utr;Parent=Msa1453030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
