AlfalfaGEDB | Msa0023010

M. sativa cultivar zhongmu-4 / Msa0023010

KEGG: -
GO: GO:0000166 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0008144 GO:0016020 GO:0016208 GO:0017076 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0044464 GO:0071944 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00582.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0023010	XP_039690808.1	93.220	177	12	0	1	177	1	177	6.06e-120	346

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0023010	sp\|Q8LGG8\|USPAL_ARATH	30.612	98	67	1	71	168	66	162	2.10e-14	70.5

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0015930	Msa0023010	0.860658	1.771832e-63	-8.615850e-47
Msa0023000	Msa0023010	0.805480	1.307936e-49	-8.615850e-47
Msa0023010	Msa0023040	0.894951	1.520728e-75	-8.615850e-47
Msa0023010	Msa0023050	0.913766	4.201811e-84	-8.615850e-47
Msa0023010	Msa0026680	0.822019	2.962558e-53	-8.615850e-47
Msa0023010	Msa0055180	0.817686	2.899027e-52	-8.615850e-47
Msa0023010	Msa0070860	0.818444	1.953504e-52	-8.615850e-47
Msa0023010	Msa0118790	0.922383	1.056717e-88	-8.615850e-47
Msa0023010	Msa0118810	0.820073	8.315613e-53	-8.615850e-47
Msa0023010	Msa0145080	0.803762	2.986511e-49	-8.615850e-47
Msa0023010	Msa0156370	0.851503	8.508192e-61	-8.615850e-47
Msa0023010	Msa0162120	0.918393	1.647234e-86	-8.615850e-47
Msa0023010	Msa0162130	0.851822	6.906637e-61	-8.615850e-47
Msa0023010	Msa0345350	0.802481	5.496104e-49	-8.615850e-47
Msa0023010	Msa0355140	0.801268	9.756394e-49	-8.615850e-47
Msa0023010	Msa0375310	0.807060	6.076975e-50	-8.615850e-47
Msa0023010	Msa0381500	0.800864	1.179992e-48	-8.615850e-47
Msa0023010	Msa0402210	0.809047	2.295382e-50	-8.615850e-47
Msa0023010	Msa0421500	0.814141	1.791837e-51	-8.615850e-47
Msa0023010	Msa0469560	-0.806490	8.019566e-50	-8.615850e-47
Msa0023010	Msa0483770	0.800217	1.598163e-48	-8.615850e-47
Msa0023010	Msa0513990	0.804248	2.366079e-49	-8.615850e-47
Msa0023010	Msa0515270	-0.808736	2.674679e-50	-8.615850e-47
Msa0023010	Msa0550120	0.861071	1.327291e-63	-8.615850e-47
Msa0023010	Msa0550150	0.827540	1.478599e-54	-8.615850e-47
Msa0023010	Msa0588260	0.837548	4.870681e-57	-8.615850e-47
Msa0023010	Msa0605630	0.859143	5.072681e-63	-8.615850e-47
Msa0023010	Msa0605640	0.809183	2.145986e-50	-8.615850e-47
Msa0023010	Msa0605650	0.842627	2.304166e-58	-8.615850e-47
Msa0023010	Msa0620890	0.820279	7.457810e-53	-8.615850e-47
Msa0023010	Msa0631350	0.801627	8.236430e-49	-8.615850e-47
Msa0023010	Msa0646580	0.869792	2.373975e-66	-8.615850e-47
Msa0023010	Msa0686210	0.825857	3.728735e-54	-8.615850e-47
Msa0023010	Msa0686220	0.811838	5.728852e-51	-8.615850e-47
Msa0023010	Msa0764680	-0.820967	5.183609e-53	-8.615850e-47
Msa0023010	Msa0817730	0.807740	4.359933e-50	-8.615850e-47
Msa0023010	Msa0818750	0.826483	2.646498e-54	-8.615850e-47
Msa0023010	Msa0858180	0.805151	1.532879e-49	-8.615850e-47
Msa0023010	Msa0861860	0.803896	2.800303e-49	-8.615850e-47
Msa0023010	Msa0867730	0.834274	3.295008e-56	-8.615850e-47
Msa0023010	Msa0968610	0.805898	1.068492e-49	-8.615850e-47
Msa0023010	Msa1030620	0.803120	4.057040e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0023010	MtrunA17_Chr1g0176321	93.220	177	12	0	1	177	1	177	5.57e-124	346
Msa0023010	MtrunA17_Chr1g0176311	80.791	177	28	4	1	177	20	190	1.38e-99	285
Msa0023010	MtrunA17_Chr1g0192651	38.095	168	85	3	4	171	10	158	5.41e-33	115
Msa0023010	MtrunA17_Chr1g0195661	40.588	170	83	4	6	174	15	167	1.36e-32	114
Msa0023010	MtrunA17_Chr1g0194801	35.882	170	88	4	4	170	7	158	2.36e-29	105
Msa0023010	MtrunA17_Chr5g0427291	35.673	171	93	7	5	168	10	170	3.58e-27	100
Msa0023010	MtrunA17_Chr7g0269301	36.364	176	89	6	2	174	7	162	9.47e-23	89.0
Msa0023010	MtrunA17_Chr4g0032261	31.928	166	98	2	4	168	6	157	6.65e-19	79.0
Msa0023010	MtrunA17_Chr2g0323291	30.055	183	95	6	4	174	26	187	1.56e-18	79.7
Msa0023010	MtrunA17_Chr2g0294421	30.233	172	105	3	4	174	6	163	9.15e-17	73.6
Msa0023010	MtrunA17_Chr4g0001641	45.902	61	33	0	108	168	5	65	9.30e-17	70.9
Msa0023010	MtrunA17_Chr5g0433951	33.333	186	85	7	5	177	7	166	7.62e-16	71.2
Msa0023010	MtrunA17_Chr6g0450171	31.034	87	60	0	82	168	76	162	2.72e-15	70.1
Msa0023010	MtrunA17_Chr4g0008801	29.518	166	96	3	7	168	9	157	4.80e-15	68.9
Msa0023010	MtrunA17_Chr7g0240701	28.144	167	103	3	4	168	6	157	1.16e-13	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0023010	AT3G11930.1	55.814	172	70	3	4	175	34	199	4.43e-66	201
Msa0023010	AT3G11930.2	56.069	173	69	4	4	175	34	200	4.54e-65	198
Msa0023010	AT3G11930.4	55.747	174	69	4	4	175	34	201	9.95e-65	197
Msa0023010	AT3G11930.3	48.744	199	69	5	4	175	34	226	4.34e-59	184
Msa0023010	AT3G58450.1	50.595	168	76	3	5	172	32	192	4.24e-52	166
Msa0023010	AT3G58450.2	48.810	168	72	3	5	172	32	185	8.47e-50	159
Msa0023010	AT1G09740.2	36.416	173	91	4	5	172	10	168	1.05e-30	110
Msa0023010	AT1G09740.1	36.416	173	91	4	5	172	10	168	1.05e-30	110
Msa0023010	AT2G47710.1	33.918	171	94	4	2	171	7	159	1.32e-27	102
Msa0023010	AT3G62550.1	35.294	170	84	5	4	168	8	156	1.36e-26	99.4
Msa0023010	AT1G68300.1	33.133	166	91	3	4	168	11	157	4.74e-23	90.1
Msa0023010	AT3G01520.1	30.612	98	67	1	71	168	66	162	2.13e-15	70.5
Msa0023010	AT5G14680.1	30.612	98	67	1	71	168	66	162	9.44e-15	68.9
Msa0023010	AT3G53990.1	29.070	172	95	5	7	171	9	160	1.86e-14	67.8
Msa0023010	AT3G03270.2	31.176	170	92	5	5	168	7	157	3.92e-14	67.0
Msa0023010	AT3G17020.1	30.636	173	92	5	4	168	8	160	4.71e-14	66.6
Msa0023010	AT1G11360.2	28.090	178	104	5	2	172	37	197	9.37e-14	67.4
Msa0023010	AT1G11360.1	28.090	178	104	5	2	172	37	197	9.37e-14	67.4
Msa0023010	AT1G11360.4	28.090	178	104	5	2	172	37	197	9.37e-14	67.4
Msa0023010	AT1G11360.3	28.090	178	104	5	2	172	37	197	9.37e-14	67.4

Find 56 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CGCTATGGCTACTGTTACTA+TGG	0.141861	1_1:-43633060	Msa0023010:CDS
ATGTTTAAGTATATCTTCTA+TGG	0.174763	1_1:-43631035	Msa0023010:three_prime_UTR
GCAGAAAGTGTGATTCTTAA+TGG	0.228368	1_1:-43631375	Msa0023010:CDS
TATGCATAAGTGTGGAAATT+TGG	0.264690	1_1:+43632984	None:intergenic
TATTTCTAATTGAATAATCT+TGG	0.297973	1_1:-43630959	Msa0023010:three_prime_UTR
CCAGCTGGTCCCATAGGTAT+AGG	0.340250	1_1:+43632960	None:intergenic
TTCAAAGAATCCCCAACTTC+AGG	0.340569	1_1:+43632579	None:intergenic
ATCCATCAACACCTGAAGTT+GGG	0.365371	1_1:-43632590	Msa0023010:CDS
GGCTAAGTCTGGAATAATCT+TGG	0.411526	1_1:-43631009	Msa0023010:three_prime_UTR
GCAAGTTGATCTCTTAATCA+TGG	0.412365	1_1:-43631313	Msa0023010:CDS
CAGCTGGTCCCATAGGTATA+GGG	0.428625	1_1:+43632961	None:intergenic
ATTTCTAATTGAATAATCTT+GGG	0.429529	1_1:-43630958	Msa0023010:three_prime_UTR
TTCTATGGGATGGCTAAGTC+TGG	0.444356	1_1:-43631020	Msa0023010:three_prime_UTR
ATCATGGGTAGTCGTGGCCT+TGG	0.451807	1_1:-43631297	Msa0023010:CDS
TCCCCAACTTCAGGTGTTGA+TGG	0.458443	1_1:+43632588	None:intergenic
TATCCATCAACACCTGAAGT+TGG	0.466557	1_1:-43632591	Msa0023010:CDS
CCTATGGGACCAGCTGGTAT+TGG	0.470932	1_1:-43632954	Msa0023010:intron
TTATGCATACCCTATACCTA+TGG	0.478213	1_1:-43632970	Msa0023010:CDS
ATCTGCAGCTATTGCCTCAC+GGG	0.482712	1_1:-43632538	Msa0023010:CDS
TGCAAGAGAAATGATTAGTC+AGG	0.497260	1_1:-43631349	Msa0023010:CDS
TGTTTAAGTATATCTTCTAT+GGG	0.497538	1_1:-43631034	Msa0023010:three_prime_UTR
GAAGCTTGTATGCTCTTAAG+TGG	0.498753	1_1:-43633103	Msa0023010:CDS
GTGGCCTTGGCAAACTCAAA+AGG	0.501962	1_1:-43631284	Msa0023010:intron
TTTGGTGGCAGAGCCTTCCT+TGG	0.503463	1_1:-43631156	Msa0023010:intron
GCAAATGTGCAAGGATAAGC+AGG	0.503833	1_1:-43632511	Msa0023010:intron
GGTGGCTTCACAATGAGAAT+AGG	0.504003	1_1:+43631096	None:intergenic
ATCTGAAAATGAGGAGGGAA+TGG	0.505451	1_1:-43633027	Msa0023010:CDS
ATGGCTACTGTTACTATGGA+TGG	0.511147	1_1:-43633056	Msa0023010:CDS
TAAGTATATCTTCTATGGGA+TGG	0.519898	1_1:-43631030	Msa0023010:three_prime_UTR
CCAATACCAGCTGGTCCCAT+AGG	0.522576	1_1:+43632954	None:intergenic
AAAGAGAAGGATGAAGATGA+AGG	0.523647	1_1:-43633153	Msa0023010:exon
TAGCGTTGAAGAGGTTATCA+AGG	0.523668	1_1:+43633078	None:intergenic
TCCATCAACACCTGAAGTTG+GGG	0.531250	1_1:-43632589	Msa0023010:CDS
CTCTTAATCATGGGTAGTCG+TGG	0.541714	1_1:-43631303	Msa0023010:CDS
AATAGTCACTTACACTTCCA+AGG	0.548894	1_1:+43631139	None:intergenic
AACAACTTTCAGAAAAGAGA+AGG	0.549080	1_1:-43633166	None:intergenic
CAGTAGCCATAGCGTTGAAG+AGG	0.554998	1_1:+43633069	None:intergenic
TGGAACAACATCTGAAAATG+AGG	0.557443	1_1:-43633036	Msa0023010:CDS
CAAGTTGATCTCTTAATCAT+GGG	0.558572	1_1:-43631312	Msa0023010:CDS
TGATAACCTCTTCAACGCTA+TGG	0.563001	1_1:-43633075	Msa0023010:CDS
GTCACTTACACTTCCAAGGA+AGG	0.566492	1_1:+43631143	None:intergenic
CCTATACCTATGGGACCAGC+TGG	0.573743	1_1:-43632960	Msa0023010:CDS
AATCTGCAGCTATTGCCTCA+CGG	0.584125	1_1:-43632539	Msa0023010:CDS
TATGCATACCCTATACCTAT+GGG	0.588273	1_1:-43632969	Msa0023010:CDS
GTATAGGGTATGCATAAGTG+TGG	0.596401	1_1:+43632976	None:intergenic
ACGGGCTTTGCAAATGTGCA+AGG	0.605600	1_1:-43632520	Msa0023010:CDS
GATGAAGATGAAGGTGATGG+TGG	0.605709	1_1:-43633144	Msa0023010:CDS
AACAACATCTGAAAATGAGG+AGG	0.606982	1_1:-43633033	Msa0023010:CDS
ATATACTAACCAATACCAGC+TGG	0.608648	1_1:+43632945	None:intergenic
ACAACATCTGAAAATGAGGA+GGG	0.642374	1_1:-43633032	Msa0023010:CDS
AAGGATGAAGATGAAGGTGA+TGG	0.645453	1_1:-43633147	Msa0023010:exon
AGCGTTGAAGAGGTTATCAA+GGG	0.645807	1_1:+43633079	None:intergenic
AAGCTTGTATGCTCTTAAGT+GGG	0.653871	1_1:-43633102	Msa0023010:CDS
GTGGCAATAGATGAGAGTGA+TGG	0.658459	1_1:-43633125	Msa0023010:CDS
GCACATTTGCAAAGCCCGTG+AGG	0.665936	1_1:+43632524	None:intergenic
TCTCATTGTGAAGCCACCAG+AGG	0.677993	1_1:-43631091	Msa0023010:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	CGTAAATATTAAATAAATTT+AGG	+	chr1_1:43632500-43632519	None:intergenic	10.0%
!!	CGTAAATATTAAATAAATTT+AGG	+	chr1_1:43632500-43632519	None:intergenic	10.0%
!!!	TGTTTTTATTTTTAGTATAG+AGG	+	chr1_1:43631849-43631868	None:intergenic	15.0%
!!	AATAGGATAAATTAAATGAA+GGG	+	chr1_1:43631905-43631924	None:intergenic	15.0%
!!	TAATAGGATAAATTAAATGA+AGG	+	chr1_1:43631906-43631925	None:intergenic	15.0%
!!	GAATAATGACATTAATTAAT+AGG	+	chr1_1:43631922-43631941	None:intergenic	15.0%
!!	AACTAAAATAATTTCTTTGA+CGG	-	chr1_1:43632191-43632210	Msa0023010:intron	15.0%
!!!	TAAATTATGGCTTTTAAATT+AGG	-	chr1_1:43632575-43632594	Msa0023010:CDS	15.0%
!!!	GTTCTAATATTTTTTACATT+TGG	-	chr1_1:43632864-43632883	Msa0023010:intron	15.0%
!!!	TATTTCTAATTGAATAATCT+TGG	-	chr1_1:43633079-43633098	Msa0023010:CDS	15.0%
!!	ATTTCTAATTGAATAATCTT+GGG	-	chr1_1:43633080-43633099	Msa0023010:CDS	15.0%
!!!	TGTTTTTATTTTTAGTATAG+AGG	+	chr1_1:43631849-43631868	None:intergenic	15.0%
!!	AATAGGATAAATTAAATGAA+GGG	+	chr1_1:43631905-43631924	None:intergenic	15.0%
!!	TAATAGGATAAATTAAATGA+AGG	+	chr1_1:43631906-43631925	None:intergenic	15.0%
!!	GAATAATGACATTAATTAAT+AGG	+	chr1_1:43631922-43631941	None:intergenic	15.0%
!!	AACTAAAATAATTTCTTTGA+CGG	-	chr1_1:43632191-43632210	Msa0023010:intron	15.0%
!!!	TAAATTATGGCTTTTAAATT+AGG	-	chr1_1:43632575-43632594	Msa0023010:CDS	15.0%
!!!	GTTCTAATATTTTTTACATT+TGG	-	chr1_1:43632864-43632883	Msa0023010:intron	15.0%
!!!	TATTTCTAATTGAATAATCT+TGG	-	chr1_1:43633079-43633098	Msa0023010:CDS	15.0%
!!	ATTTCTAATTGAATAATCTT+GGG	-	chr1_1:43633080-43633099	Msa0023010:CDS	15.0%
!!	AAAAATGATGTAACTTTGTA+AGG	-	chr1_1:43631186-43631205	Msa0023010:intron	20.0%
!!!	TTAATATTGTCCATTTTTCT+TGG	-	chr1_1:43631216-43631235	Msa0023010:intron	20.0%
!!!	GTTAATTGTCACTTATATTA+GGG	+	chr1_1:43631643-43631662	None:intergenic	20.0%
!!!	AGTTAATTGTCACTTATATT+AGG	+	chr1_1:43631644-43631663	None:intergenic	20.0%
!!	TTTCATGATAAACAGAAAAT+AGG	-	chr1_1:43631758-43631777	Msa0023010:intron	20.0%
!!	TTCATGATAAACAGAAAATA+GGG	-	chr1_1:43631759-43631778	Msa0023010:intron	20.0%
!!!	AAAGGAAGATTATTTTTTGA+AGG	+	chr1_1:43631820-43631839	None:intergenic	20.0%
!!!	AAAATACCCTTCATTTTTTT+TGG	-	chr1_1:43631868-43631887	Msa0023010:intron	20.0%
!!	TTGTAACCAAAAAAAATGAA+GGG	+	chr1_1:43631877-43631896	None:intergenic	20.0%
!!	TTTGTAACCAAAAAAAATGA+AGG	+	chr1_1:43631878-43631897	None:intergenic	20.0%
!!	GTAATATTGCATATGTTATA+CGG	-	chr1_1:43632439-43632458	Msa0023010:intron	20.0%
!!!	GTGATGATGTTTTAAAAATT+CGG	-	chr1_1:43632541-43632560	Msa0023010:CDS	20.0%
!!!	ATTTTGATTTCATTTATGCA+TGG	-	chr1_1:43632835-43632854	Msa0023010:intron	20.0%
!!!	CTAATATTTTTTACATTTGG+TGG	-	chr1_1:43632867-43632886	Msa0023010:intron	20.0%
!!	ATGTTTAAGTATATCTTCTA+TGG	-	chr1_1:43633003-43633022	Msa0023010:CDS	20.0%
!!	TGTTTAAGTATATCTTCTAT+GGG	-	chr1_1:43633004-43633023	Msa0023010:CDS	20.0%
!!	AAAAATGATGTAACTTTGTA+AGG	-	chr1_1:43631186-43631205	Msa0023010:intron	20.0%
!!!	TTAATATTGTCCATTTTTCT+TGG	-	chr1_1:43631216-43631235	Msa0023010:intron	20.0%
!!!	GTTAATTGTCACTTATATTA+GGG	+	chr1_1:43631643-43631662	None:intergenic	20.0%
!!!	AGTTAATTGTCACTTATATT+AGG	+	chr1_1:43631644-43631663	None:intergenic	20.0%
!!	TTTCATGATAAACAGAAAAT+AGG	-	chr1_1:43631758-43631777	Msa0023010:intron	20.0%
!!	TTCATGATAAACAGAAAATA+GGG	-	chr1_1:43631759-43631778	Msa0023010:intron	20.0%
!!!	AAAGGAAGATTATTTTTTGA+AGG	+	chr1_1:43631820-43631839	None:intergenic	20.0%
!!!	AAAATACCCTTCATTTTTTT+TGG	-	chr1_1:43631868-43631887	Msa0023010:intron	20.0%
!!	TTGTAACCAAAAAAAATGAA+GGG	+	chr1_1:43631877-43631896	None:intergenic	20.0%
!!	TTTGTAACCAAAAAAAATGA+AGG	+	chr1_1:43631878-43631897	None:intergenic	20.0%
!!	GTAATATTGCATATGTTATA+CGG	-	chr1_1:43632439-43632458	Msa0023010:intron	20.0%
!!!	GTGATGATGTTTTAAAAATT+CGG	-	chr1_1:43632541-43632560	Msa0023010:CDS	20.0%
!!!	ATTTTGATTTCATTTATGCA+TGG	-	chr1_1:43632835-43632854	Msa0023010:intron	20.0%
!!!	CTAATATTTTTTACATTTGG+TGG	-	chr1_1:43632867-43632886	Msa0023010:intron	20.0%
!!	ATGTTTAAGTATATCTTCTA+TGG	-	chr1_1:43633003-43633022	Msa0023010:CDS	20.0%
!!	TGTTTAAGTATATCTTCTAT+GGG	-	chr1_1:43633004-43633023	Msa0023010:CDS	20.0%
!	GAATTAGACATGGAAAAAAA+AGG	+	chr1_1:43631153-43631172	None:intergenic	25.0%
!	AATTATGAGAGAATTAGACA+TGG	+	chr1_1:43631163-43631182	None:intergenic	25.0%
!!!	GGGAATGAACAATTTTAAAA+GGG	+	chr1_1:43631623-43631642	None:intergenic	25.0%
!!	AGGGAATGAACAATTTTAAA+AGG	+	chr1_1:43631624-43631643	None:intergenic	25.0%
!	TCATGATAAACAGAAAATAG+GGG	-	chr1_1:43631760-43631779	Msa0023010:intron	25.0%
!!!	GAAGATTATTTTTTGAAGGA+AGG	+	chr1_1:43631816-43631835	None:intergenic	25.0%
!	TTCTCGTAGACAATATAATT+TGG	+	chr1_1:43632082-43632101	None:intergenic	25.0%
!!!	ACTATGATCAATGCTTTTTA+TGG	+	chr1_1:43632977-43632996	None:intergenic	25.0%
!	GAATTAGACATGGAAAAAAA+AGG	+	chr1_1:43631153-43631172	None:intergenic	25.0%
!	AATTATGAGAGAATTAGACA+TGG	+	chr1_1:43631163-43631182	None:intergenic	25.0%
!!!	GGGAATGAACAATTTTAAAA+GGG	+	chr1_1:43631623-43631642	None:intergenic	25.0%
!!	AGGGAATGAACAATTTTAAA+AGG	+	chr1_1:43631624-43631643	None:intergenic	25.0%
!	TCATGATAAACAGAAAATAG+GGG	-	chr1_1:43631760-43631779	Msa0023010:intron	25.0%
!!!	GAAGATTATTTTTTGAAGGA+AGG	+	chr1_1:43631816-43631835	None:intergenic	25.0%
!	TTCTCGTAGACAATATAATT+TGG	+	chr1_1:43632082-43632101	None:intergenic	25.0%
!!!	ACTATGATCAATGCTTTTTA+TGG	+	chr1_1:43632977-43632996	None:intergenic	25.0%
	TATGCATAAGTGTGGAAATT+TGG	+	chr1_1:43631057-43631076	None:intergenic	30.0%
	ATGATGTAACTTTGTAAGGT+TGG	-	chr1_1:43631190-43631209	Msa0023010:intron	30.0%
	AACTTACACAAGTGTATTCT+CGG	+	chr1_1:43631328-43631347	None:intergenic	30.0%
!	CAAAGTATCACACAAGAAAA+GGG	+	chr1_1:43631410-43631429	None:intergenic	30.0%
!	ACAAAGTATCACACAAGAAA+AGG	+	chr1_1:43631411-43631430	None:intergenic	30.0%
	TTCCCATTCCTTTATATCAA+CGG	+	chr1_1:43631704-43631723	None:intergenic	30.0%
	CATGATAAACAGAAAATAGG+GGG	-	chr1_1:43631761-43631780	Msa0023010:intron	30.0%
!!	AAAGGAAGATGATTGCTTTT+TGG	+	chr1_1:43631787-43631806	None:intergenic	30.0%
	TTAGTATAGAGGAAAGTGAA+AGG	+	chr1_1:43631838-43631857	None:intergenic	30.0%
!	ACGGAAGTGTATTAAATCTA+TGG	-	chr1_1:43632210-43632229	Msa0023010:intron	30.0%
!	CGGAAGTGTATTAAATCTAT+GGG	-	chr1_1:43632211-43632230	Msa0023010:intron	30.0%
	GGTAGAAGCTACATAAATTA+TGG	-	chr1_1:43632562-43632581	Msa0023010:CDS	30.0%
	ATGCATACTTTCATTGGATT+TGG	+	chr1_1:43632625-43632644	None:intergenic	30.0%
	TCATTGATGCATACTTTCAT+TGG	+	chr1_1:43632631-43632650	None:intergenic	30.0%
!!	CAAGTTGATCTCTTAATCAT+GGG	-	chr1_1:43632726-43632745	Msa0023010:intron	30.0%
	TTTCATTTATGCATGGTTGA+TGG	-	chr1_1:43632842-43632861	Msa0023010:intron	30.0%
	TAAGTATATCTTCTATGGGA+TGG	-	chr1_1:43633008-43633027	Msa0023010:CDS	30.0%
	TATGCATAAGTGTGGAAATT+TGG	+	chr1_1:43631057-43631076	None:intergenic	30.0%
	ATGATGTAACTTTGTAAGGT+TGG	-	chr1_1:43631190-43631209	Msa0023010:intron	30.0%
	AACTTACACAAGTGTATTCT+CGG	+	chr1_1:43631328-43631347	None:intergenic	30.0%
!	CAAAGTATCACACAAGAAAA+GGG	+	chr1_1:43631410-43631429	None:intergenic	30.0%
!	ACAAAGTATCACACAAGAAA+AGG	+	chr1_1:43631411-43631430	None:intergenic	30.0%
	TTCCCATTCCTTTATATCAA+CGG	+	chr1_1:43631704-43631723	None:intergenic	30.0%
	CATGATAAACAGAAAATAGG+GGG	-	chr1_1:43631761-43631780	Msa0023010:intron	30.0%
!!	AAAGGAAGATGATTGCTTTT+TGG	+	chr1_1:43631787-43631806	None:intergenic	30.0%
	TTAGTATAGAGGAAAGTGAA+AGG	+	chr1_1:43631838-43631857	None:intergenic	30.0%
!	ACGGAAGTGTATTAAATCTA+TGG	-	chr1_1:43632210-43632229	Msa0023010:intron	30.0%
!	CGGAAGTGTATTAAATCTAT+GGG	-	chr1_1:43632211-43632230	Msa0023010:intron	30.0%
	GGTAGAAGCTACATAAATTA+TGG	-	chr1_1:43632562-43632581	Msa0023010:CDS	30.0%
	ATGCATACTTTCATTGGATT+TGG	+	chr1_1:43632625-43632644	None:intergenic	30.0%
	TCATTGATGCATACTTTCAT+TGG	+	chr1_1:43632631-43632650	None:intergenic	30.0%
!!	CAAGTTGATCTCTTAATCAT+GGG	-	chr1_1:43632726-43632745	Msa0023010:intron	30.0%
	TTTCATTTATGCATGGTTGA+TGG	-	chr1_1:43632842-43632861	Msa0023010:intron	30.0%
	TAAGTATATCTTCTATGGGA+TGG	-	chr1_1:43633008-43633027	Msa0023010:CDS	30.0%
	AAAGAGAAGGATGAAGATGA+AGG	-	chr1_1:43630885-43630904	Msa0023010:three_prime_UTR	35.0%
	AAGCTTGTATGCTCTTAAGT+GGG	-	chr1_1:43630936-43630955	Msa0023010:three_prime_UTR	35.0%
	TGGAACAACATCTGAAAATG+AGG	-	chr1_1:43631002-43631021	Msa0023010:three_prime_UTR	35.0%
	AACAACATCTGAAAATGAGG+AGG	-	chr1_1:43631005-43631024	Msa0023010:three_prime_UTR	35.0%
	ACAACATCTGAAAATGAGGA+GGG	-	chr1_1:43631006-43631025	Msa0023010:three_prime_UTR	35.0%
	TTATGCATACCCTATACCTA+TGG	-	chr1_1:43631068-43631087	Msa0023010:exon	35.0%
	TATGCATACCCTATACCTAT+GGG	-	chr1_1:43631069-43631088	Msa0023010:exon	35.0%
	ATATACTAACCAATACCAGC+TGG	+	chr1_1:43631096-43631115	None:intergenic	35.0%
	AGGAAGTAAGCAAAGAAAGT+TGG	+	chr1_1:43631133-43631152	None:intergenic	35.0%
	GAGCAATTCTCCAAGAAAAA+TGG	+	chr1_1:43631229-43631248	None:intergenic	35.0%
	CAGAAATGAGCAAAATCAGA+TGG	+	chr1_1:43631273-43631292	None:intergenic	35.0%
	TGTGTAAGTTAATTCACGCT+CGG	-	chr1_1:43631338-43631357	Msa0023010:CDS	35.0%
	GGGAATGAGCAAAAATAGAT+GGG	-	chr1_1:43631371-43631390	Msa0023010:CDS	35.0%
	ATGGATAAACAGCTGTTGAA+AGG	+	chr1_1:43631434-43631453	None:intergenic	35.0%
!!!	AGCTGCAGATTTTTTTTGCT+GGG	+	chr1_1:43631490-43631509	None:intergenic	35.0%
!!!	TAGCTGCAGATTTTTTTTGC+TGG	+	chr1_1:43631491-43631510	None:intergenic	35.0%
	AGTTACTGCCGTTGATATAA+AGG	-	chr1_1:43631693-43631712	Msa0023010:intron	35.0%
	TGCCGTTGATATAAAGGAAT+GGG	-	chr1_1:43631699-43631718	Msa0023010:intron	35.0%
	TTTGAAGGAAGGAAAGTGAA+AGG	+	chr1_1:43631805-43631824	None:intergenic	35.0%
	ACAAACATTATTCTCTCGTC+AGG	-	chr1_1:43631988-43632007	Msa0023010:intron	35.0%
	CGTCAGGATAGTAAAATCAA+CGG	-	chr1_1:43632004-43632023	Msa0023010:intron	35.0%
	AAGTATGCATCAATGAAAGC+AGG	-	chr1_1:43632635-43632654	Msa0023010:intron	35.0%
!	GCAGAAAGTGTGATTCTTAA+TGG	-	chr1_1:43632663-43632682	Msa0023010:intron	35.0%
!	TGCAAGAGAAATGATTAGTC+AGG	-	chr1_1:43632689-43632708	Msa0023010:intron	35.0%
!!	GCAAGTTGATCTCTTAATCA+TGG	-	chr1_1:43632725-43632744	Msa0023010:intron	35.0%
	AATAGTCACTTACACTTCCA+AGG	+	chr1_1:43632902-43632921	None:intergenic	35.0%
	AAAGAGAAGGATGAAGATGA+AGG	-	chr1_1:43630885-43630904	Msa0023010:three_prime_UTR	35.0%
	AAGCTTGTATGCTCTTAAGT+GGG	-	chr1_1:43630936-43630955	Msa0023010:three_prime_UTR	35.0%
	TGGAACAACATCTGAAAATG+AGG	-	chr1_1:43631002-43631021	Msa0023010:three_prime_UTR	35.0%
	AACAACATCTGAAAATGAGG+AGG	-	chr1_1:43631005-43631024	Msa0023010:three_prime_UTR	35.0%
	ACAACATCTGAAAATGAGGA+GGG	-	chr1_1:43631006-43631025	Msa0023010:three_prime_UTR	35.0%
	TTATGCATACCCTATACCTA+TGG	-	chr1_1:43631068-43631087	Msa0023010:exon	35.0%
	TATGCATACCCTATACCTAT+GGG	-	chr1_1:43631069-43631088	Msa0023010:exon	35.0%
	ATATACTAACCAATACCAGC+TGG	+	chr1_1:43631096-43631115	None:intergenic	35.0%
	AGGAAGTAAGCAAAGAAAGT+TGG	+	chr1_1:43631133-43631152	None:intergenic	35.0%
	GAGCAATTCTCCAAGAAAAA+TGG	+	chr1_1:43631229-43631248	None:intergenic	35.0%
	CAGAAATGAGCAAAATCAGA+TGG	+	chr1_1:43631273-43631292	None:intergenic	35.0%
	TGTGTAAGTTAATTCACGCT+CGG	-	chr1_1:43631338-43631357	Msa0023010:CDS	35.0%
	GGGAATGAGCAAAAATAGAT+GGG	-	chr1_1:43631371-43631390	Msa0023010:CDS	35.0%
	ATGGATAAACAGCTGTTGAA+AGG	+	chr1_1:43631434-43631453	None:intergenic	35.0%
!!!	AGCTGCAGATTTTTTTTGCT+GGG	+	chr1_1:43631490-43631509	None:intergenic	35.0%
!!!	TAGCTGCAGATTTTTTTTGC+TGG	+	chr1_1:43631491-43631510	None:intergenic	35.0%
	AGTTACTGCCGTTGATATAA+AGG	-	chr1_1:43631693-43631712	Msa0023010:intron	35.0%
	TGCCGTTGATATAAAGGAAT+GGG	-	chr1_1:43631699-43631718	Msa0023010:intron	35.0%
	TTTGAAGGAAGGAAAGTGAA+AGG	+	chr1_1:43631805-43631824	None:intergenic	35.0%
	ACAAACATTATTCTCTCGTC+AGG	-	chr1_1:43631988-43632007	Msa0023010:intron	35.0%
	CGTCAGGATAGTAAAATCAA+CGG	-	chr1_1:43632004-43632023	Msa0023010:intron	35.0%
	AAGTATGCATCAATGAAAGC+AGG	-	chr1_1:43632635-43632654	Msa0023010:intron	35.0%
!	GCAGAAAGTGTGATTCTTAA+TGG	-	chr1_1:43632663-43632682	Msa0023010:intron	35.0%
!	TGCAAGAGAAATGATTAGTC+AGG	-	chr1_1:43632689-43632708	Msa0023010:intron	35.0%
!!	GCAAGTTGATCTCTTAATCA+TGG	-	chr1_1:43632725-43632744	Msa0023010:intron	35.0%
	AATAGTCACTTACACTTCCA+AGG	+	chr1_1:43632902-43632921	None:intergenic	35.0%
	AAGGATGAAGATGAAGGTGA+TGG	-	chr1_1:43630891-43630910	Msa0023010:three_prime_UTR	40.0%
	GAAGCTTGTATGCTCTTAAG+TGG	-	chr1_1:43630935-43630954	Msa0023010:three_prime_UTR	40.0%
!	AGCGTTGAAGAGGTTATCAA+GGG	+	chr1_1:43630962-43630981	None:intergenic	40.0%
!	TAGCGTTGAAGAGGTTATCA+AGG	+	chr1_1:43630963-43630982	None:intergenic	40.0%
	TGATAACCTCTTCAACGCTA+TGG	-	chr1_1:43630963-43630982	Msa0023010:three_prime_UTR	40.0%
	ATGGCTACTGTTACTATGGA+TGG	-	chr1_1:43630982-43631001	Msa0023010:three_prime_UTR	40.0%
	ATCTGAAAATGAGGAGGGAA+TGG	-	chr1_1:43631011-43631030	Msa0023010:three_prime_UTR	40.0%
	GTATAGGGTATGCATAAGTG+TGG	+	chr1_1:43631065-43631084	None:intergenic	40.0%
	CAGATGGAAGAAGAGCAATT+TGG	+	chr1_1:43631257-43631276	None:intergenic	40.0%
	TTCTCGGTATGAGTTAACTC+AGG	+	chr1_1:43631312-43631331	None:intergenic	40.0%
	CGGGAATGAGCAAAAATAGA+TGG	-	chr1_1:43631370-43631389	Msa0023010:CDS	40.0%
	TATCCATCAACACCTGAAGT+TGG	-	chr1_1:43631447-43631466	Msa0023010:intron	40.0%
	ATCCATCAACACCTGAAGTT+GGG	-	chr1_1:43631448-43631467	Msa0023010:intron	40.0%
	TTCAAAGAATCCCCAACTTC+AGG	+	chr1_1:43631462-43631481	None:intergenic	40.0%
	CTGCCGTTGATATAAAGGAA+TGG	-	chr1_1:43631698-43631717	Msa0023010:intron	40.0%
	GAAATGAGTCTCGCTTTACA+AGG	+	chr1_1:43632139-43632158	None:intergenic	40.0%
!	TTTTTACGGAACTTCCGTCA+AGG	+	chr1_1:43632161-43632180	None:intergenic	40.0%
!!!	CTTACCTTTTGAGTTTGCCA+AGG	+	chr1_1:43632761-43632780	None:intergenic	40.0%
!	GGCTAAGTCTGGAATAATCT+TGG	-	chr1_1:43633029-43633048	Msa0023010:CDS	40.0%
	AAGGATGAAGATGAAGGTGA+TGG	-	chr1_1:43630891-43630910	Msa0023010:three_prime_UTR	40.0%
	GAAGCTTGTATGCTCTTAAG+TGG	-	chr1_1:43630935-43630954	Msa0023010:three_prime_UTR	40.0%
!	AGCGTTGAAGAGGTTATCAA+GGG	+	chr1_1:43630962-43630981	None:intergenic	40.0%
!	TAGCGTTGAAGAGGTTATCA+AGG	+	chr1_1:43630963-43630982	None:intergenic	40.0%
	TGATAACCTCTTCAACGCTA+TGG	-	chr1_1:43630963-43630982	Msa0023010:three_prime_UTR	40.0%
	ATGGCTACTGTTACTATGGA+TGG	-	chr1_1:43630982-43631001	Msa0023010:three_prime_UTR	40.0%
	ATCTGAAAATGAGGAGGGAA+TGG	-	chr1_1:43631011-43631030	Msa0023010:three_prime_UTR	40.0%
	GTATAGGGTATGCATAAGTG+TGG	+	chr1_1:43631065-43631084	None:intergenic	40.0%
	CAGATGGAAGAAGAGCAATT+TGG	+	chr1_1:43631257-43631276	None:intergenic	40.0%
	TTCTCGGTATGAGTTAACTC+AGG	+	chr1_1:43631312-43631331	None:intergenic	40.0%
	CGGGAATGAGCAAAAATAGA+TGG	-	chr1_1:43631370-43631389	Msa0023010:CDS	40.0%
	TATCCATCAACACCTGAAGT+TGG	-	chr1_1:43631447-43631466	Msa0023010:intron	40.0%
	ATCCATCAACACCTGAAGTT+GGG	-	chr1_1:43631448-43631467	Msa0023010:intron	40.0%
	TTCAAAGAATCCCCAACTTC+AGG	+	chr1_1:43631462-43631481	None:intergenic	40.0%
	CTGCCGTTGATATAAAGGAA+TGG	-	chr1_1:43631698-43631717	Msa0023010:intron	40.0%
	GAAATGAGTCTCGCTTTACA+AGG	+	chr1_1:43632139-43632158	None:intergenic	40.0%
!	TTTTTACGGAACTTCCGTCA+AGG	+	chr1_1:43632161-43632180	None:intergenic	40.0%
!!!	CTTACCTTTTGAGTTTGCCA+AGG	+	chr1_1:43632761-43632780	None:intergenic	40.0%
!	GGCTAAGTCTGGAATAATCT+TGG	-	chr1_1:43633029-43633048	Msa0023010:CDS	40.0%
!	GATGAAGATGAAGGTGATGG+TGG	-	chr1_1:43630894-43630913	Msa0023010:three_prime_UTR	45.0%
	GTGGCAATAGATGAGAGTGA+TGG	-	chr1_1:43630913-43630932	Msa0023010:three_prime_UTR	45.0%
	CGCTATGGCTACTGTTACTA+TGG	-	chr1_1:43630978-43630997	Msa0023010:three_prime_UTR	45.0%
!!	TTCACGCTCGGCTATTTTGA+CGG	-	chr1_1:43631350-43631369	Msa0023010:CDS	45.0%
	TCCATCAACACCTGAAGTTG+GGG	-	chr1_1:43631449-43631468	Msa0023010:intron	45.0%
	AATCTGCAGCTATTGCCTCA+CGG	-	chr1_1:43631499-43631518	Msa0023010:intron	45.0%
	GCAAATGTGCAAGGATAAGC+AGG	-	chr1_1:43631527-43631546	Msa0023010:intron	45.0%
	AGCGAGACTCATTTCCTTGA+CGG	-	chr1_1:43632144-43632163	Msa0023010:intron	45.0%
	CTCTTAATCATGGGTAGTCG+TGG	-	chr1_1:43632735-43632754	Msa0023010:intron	45.0%
	GTCACTTACACTTCCAAGGA+AGG	+	chr1_1:43632898-43632917	None:intergenic	45.0%
	GGTGGCTTCACAATGAGAAT+AGG	+	chr1_1:43632945-43632964	None:intergenic	45.0%
!	TTTTTATGGTGCTCCTCTGG+TGG	+	chr1_1:43632963-43632982	None:intergenic	45.0%
!!	TGCTTTTTATGGTGCTCCTC+TGG	+	chr1_1:43632966-43632985	None:intergenic	45.0%
	TTCTATGGGATGGCTAAGTC+TGG	-	chr1_1:43633018-43633037	Msa0023010:CDS	45.0%
!	GATGAAGATGAAGGTGATGG+TGG	-	chr1_1:43630894-43630913	Msa0023010:three_prime_UTR	45.0%
	GTGGCAATAGATGAGAGTGA+TGG	-	chr1_1:43630913-43630932	Msa0023010:three_prime_UTR	45.0%
	CGCTATGGCTACTGTTACTA+TGG	-	chr1_1:43630978-43630997	Msa0023010:three_prime_UTR	45.0%
!!	TTCACGCTCGGCTATTTTGA+CGG	-	chr1_1:43631350-43631369	Msa0023010:CDS	45.0%
	TCCATCAACACCTGAAGTTG+GGG	-	chr1_1:43631449-43631468	Msa0023010:intron	45.0%
	AATCTGCAGCTATTGCCTCA+CGG	-	chr1_1:43631499-43631518	Msa0023010:intron	45.0%
	GCAAATGTGCAAGGATAAGC+AGG	-	chr1_1:43631527-43631546	Msa0023010:intron	45.0%
	AGCGAGACTCATTTCCTTGA+CGG	-	chr1_1:43632144-43632163	Msa0023010:intron	45.0%
	CTCTTAATCATGGGTAGTCG+TGG	-	chr1_1:43632735-43632754	Msa0023010:intron	45.0%
	GTCACTTACACTTCCAAGGA+AGG	+	chr1_1:43632898-43632917	None:intergenic	45.0%
	GGTGGCTTCACAATGAGAAT+AGG	+	chr1_1:43632945-43632964	None:intergenic	45.0%
!	TTTTTATGGTGCTCCTCTGG+TGG	+	chr1_1:43632963-43632982	None:intergenic	45.0%
!!	TGCTTTTTATGGTGCTCCTC+TGG	+	chr1_1:43632966-43632985	None:intergenic	45.0%
	TTCTATGGGATGGCTAAGTC+TGG	-	chr1_1:43633018-43633037	Msa0023010:CDS	45.0%
!!!	AGTTTTTTTTTTTTTTTTTA+CGG	+	chr1_1:43632175-43632194	None:intergenic	5.0%
!!	TTTAATATAAAATATACAAT+TGG	+	chr1_1:43632342-43632361	None:intergenic	5.0%
!!!	AGTTTTTTTTTTTTTTTTTA+CGG	+	chr1_1:43632175-43632194	None:intergenic	5.0%
!!	TTTAATATAAAATATACAAT+TGG	+	chr1_1:43632342-43632361	None:intergenic	5.0%
!	CAGTAGCCATAGCGTTGAAG+AGG	+	chr1_1:43630972-43630991	None:intergenic	50.0%
	CAGCTGGTCCCATAGGTATA+GGG	+	chr1_1:43631080-43631099	None:intergenic	50.0%
!!!	TCACGCTCGGCTATTTTGAC+GGG	-	chr1_1:43631351-43631370	Msa0023010:CDS	50.0%
!!	TCCCCAACTTCAGGTGTTGA+TGG	+	chr1_1:43631453-43631472	None:intergenic	50.0%
	ATCTGCAGCTATTGCCTCAC+GGG	-	chr1_1:43631500-43631519	Msa0023010:intron	50.0%
	ACGGGCTTTGCAAATGTGCA+AGG	-	chr1_1:43631518-43631537	Msa0023010:intron	50.0%
	TGTGCAAGGATAAGCAGGTG+CGG	-	chr1_1:43631532-43631551	Msa0023010:intron	50.0%
!	GTGGCCTTGGCAAACTCAAA+AGG	-	chr1_1:43632754-43632773	Msa0023010:intron	50.0%
	TCTCATTGTGAAGCCACCAG+AGG	-	chr1_1:43632947-43632966	Msa0023010:intron	50.0%
!	CAGTAGCCATAGCGTTGAAG+AGG	+	chr1_1:43630972-43630991	None:intergenic	50.0%
	CAGCTGGTCCCATAGGTATA+GGG	+	chr1_1:43631080-43631099	None:intergenic	50.0%
!!!	TCACGCTCGGCTATTTTGAC+GGG	-	chr1_1:43631351-43631370	Msa0023010:CDS	50.0%
!!	TCCCCAACTTCAGGTGTTGA+TGG	+	chr1_1:43631453-43631472	None:intergenic	50.0%
	ATCTGCAGCTATTGCCTCAC+GGG	-	chr1_1:43631500-43631519	Msa0023010:intron	50.0%
	ACGGGCTTTGCAAATGTGCA+AGG	-	chr1_1:43631518-43631537	Msa0023010:intron	50.0%
	TGTGCAAGGATAAGCAGGTG+CGG	-	chr1_1:43631532-43631551	Msa0023010:intron	50.0%
!	GTGGCCTTGGCAAACTCAAA+AGG	-	chr1_1:43632754-43632773	Msa0023010:intron	50.0%
	TCTCATTGTGAAGCCACCAG+AGG	-	chr1_1:43632947-43632966	Msa0023010:intron	50.0%
	CCAGCTGGTCCCATAGGTAT+AGG	+	chr1_1:43631081-43631100	None:intergenic	55.0%
	CCTATACCTATGGGACCAGC+TGG	-	chr1_1:43631078-43631097	Msa0023010:CDS	55.0%
	CCAATACCAGCTGGTCCCAT+AGG	+	chr1_1:43631087-43631106	None:intergenic	55.0%
	CCTATGGGACCAGCTGGTAT+TGG	-	chr1_1:43631084-43631103	Msa0023010:CDS	55.0%
	GCACATTTGCAAAGCCCGTG+AGG	+	chr1_1:43631517-43631536	None:intergenic	55.0%
	ATCATGGGTAGTCGTGGCCT+TGG	-	chr1_1:43632741-43632760	Msa0023010:intron	55.0%
!	TTTGGTGGCAGAGCCTTCCT+TGG	-	chr1_1:43632882-43632901	Msa0023010:intron	55.0%
	CCAGCTGGTCCCATAGGTAT+AGG	+	chr1_1:43631081-43631100	None:intergenic	55.0%
	CCTATACCTATGGGACCAGC+TGG	-	chr1_1:43631078-43631097	Msa0023010:CDS	55.0%
	CCAATACCAGCTGGTCCCAT+AGG	+	chr1_1:43631087-43631106	None:intergenic	55.0%
	CCTATGGGACCAGCTGGTAT+TGG	-	chr1_1:43631084-43631103	Msa0023010:CDS	55.0%
	GCACATTTGCAAAGCCCGTG+AGG	+	chr1_1:43631517-43631536	None:intergenic	55.0%
	ATCATGGGTAGTCGTGGCCT+TGG	-	chr1_1:43632741-43632760	Msa0023010:intron	55.0%
!	TTTGGTGGCAGAGCCTTCCT+TGG	-	chr1_1:43632882-43632901	Msa0023010:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_1	gene	43630882	43633178	43630882	ID=Msa0023010;Name=Msa0023010
chr1_1	mRNA	43630882	43633178	43630882	ID=Msa0023010-mRNA-1;Parent=Msa0023010;Name=Msa0023010-mRNA-1;_AED=0.09;_eAED=0.09;_QI=13\|1\|1\|1\|1\|1\|4\|189\|177
chr1_1	exon	43630882	43631167	43630882	ID=Msa0023010-mRNA-1:exon:12636;Parent=Msa0023010-mRNA-1
chr1_1	exon	43631285	43631403	43631285	ID=Msa0023010-mRNA-1:exon:12635;Parent=Msa0023010-mRNA-1
chr1_1	exon	43632512	43632618	43632512	ID=Msa0023010-mRNA-1:exon:12634;Parent=Msa0023010-mRNA-1
chr1_1	exon	43632955	43633178	43632955	ID=Msa0023010-mRNA-1:exon:12633;Parent=Msa0023010-mRNA-1
chr1_1	five_prime_UTR	43633166	43633178	43633166	ID=Msa0023010-mRNA-1:five_prime_utr;Parent=Msa0023010-mRNA-1
chr1_1	CDS	43632955	43633165	43632955	ID=Msa0023010-mRNA-1:cds;Parent=Msa0023010-mRNA-1
chr1_1	CDS	43632512	43632618	43632512	ID=Msa0023010-mRNA-1:cds;Parent=Msa0023010-mRNA-1
chr1_1	CDS	43631285	43631403	43631285	ID=Msa0023010-mRNA-1:cds;Parent=Msa0023010-mRNA-1
chr1_1	CDS	43631071	43631167	43631071	ID=Msa0023010-mRNA-1:cds;Parent=Msa0023010-mRNA-1
chr1_1	three_prime_UTR	43630882	43631070	43630882	ID=Msa0023010-mRNA-1:three_prime_utr;Parent=Msa0023010-mRNA-1

Gene Sequence

>Msa0023010

ATGAAGATGAAGGTGATGGTGGCAATAGATGAGAGTGATGGAAGCTTGTATGCTCTTAAGTGGGCCCTTGATAACCTCTTCAACGCTATGGCTACTGTTACTATGGATGGAACAACATCTGAAAATGAGGAGGGAATGGTGTTTCTTGTTCATGTTGAGCCAAATTTCCACACTTATGCATACCCTATACCTATGGGACCAGCTGGTATTGCTGTTTATCCATCAACACCTGAAGTTGGGGATTCTTTGAAGAAAGCCCAGCAAAAAAAATCTGCAGCTATTGCCTCACGGGCTTTGCAAATGTGCAAGGATAAGCAGGTAAAAGCAGAAAGTGTGATTCTTAATGGAGATGCAAGAGAAATGATTAGTCAGGCTACAGAGAAAATGCAAGTTGATCTCTTAATCATGGGTAGTCGTGGCCTTGGCAAACTCAAAAGAGCCTTCCTTGGAAGTGTAAGTGACTATTGTGCACATCATGCAAAAGCACCTATTCTCATTGTGAAGCCACCAGAGGAGCACCATAAAAAGCATTGA

Protein sequence

>Msa0023010

MKMKVMVAIDESDGSLYALKWALDNLFNAMATVTMDGTTSENEEGMVFLVHVEPNFHTYAYPIPMGPAGIAVYPSTPEVGDSLKKAQQKKSAAIASRALQMCKDKQVKAESVILNGDAREMISQATEKMQVDLLIMGSRGLGKLKRAFLGSVSDYCAHHAKAPILIVKPPEEHHKKH*