AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0550150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0550150 MtrunA17_Chr4g0035051 98.824 85 1 0 1 85 1 85 1.06e-58 178
Msa0550150 MtrunA17_Chr4g0035001 90.244 82 8 0 4 85 2 83 1.32e-51 162
Msa0550150 MtrunA17_Chr4g0035031 86.047 86 12 0 1 86 1 86 2.67e-50 160
Msa0550150 MtrunA17_Chr2g0278661 55.056 89 39 1 1 89 1 88 5.80e-32 114
Msa0550150 MtrunA17_Chr4g0050781 52.874 87 40 1 1 87 1 86 3.04e-29 106
Msa0550150 MtrunA17_Chr7g0219021 46.154 91 45 1 1 91 37 123 2.61e-23 92.4
Msa0550150 MtrunA17_Chr4g0061451 48.276 87 44 1 1 87 36 121 3.19e-23 92.4
Msa0550150 MtrunA17_Chr1g0210241 50.617 81 40 0 7 87 6 86 3.97e-23 92.4
Msa0550150 MtrunA17_Chr3g0116631 48.148 81 42 0 8 88 206 286 4.36e-23 92.4
Msa0550150 MtrunA17_Chr3g0116631 31.206 141 92 2 9 144 110 250 8.37e-13 64.7
Msa0550150 MtrunA17_Chr3g0086861 44.706 85 47 0 3 87 39 123 7.30e-22 90.9
Msa0550150 MtrunA17_Chr4g0058151 46.914 81 43 0 8 88 216 296 3.01e-20 85.1
Msa0550150 MtrunA17_Chr4g0058151 36.538 104 64 1 7 110 121 222 8.62e-16 72.8
Msa0550150 MtrunA17_Chr1g0181111 48.750 80 41 0 9 88 197 276 1.21e-19 83.2
Msa0550150 MtrunA17_Chr3g0121631 48.544 103 52 1 9 111 37 138 7.09e-19 78.2
Msa0550150 MtrunA17_Chr4g0017401 40.171 117 58 4 5 111 12 126 4.43e-18 78.6
Msa0550150 MtrunA17_Chr7g0266751 37.500 96 57 1 6 98 30 125 5.60e-18 75.9
Msa0550150 MtrunA17_Chr3g0119311 39.024 82 50 0 9 90 37 118 7.22e-18 75.5
Msa0550150 MtrunA17_Chr1g0168601 40.244 82 49 0 4 85 149 230 1.90e-17 76.6
Msa0550150 MtrunA17_Chr3g0144311 42.222 90 48 2 9 95 30 118 3.75e-17 76.3
Msa0550150 MtrunA17_Chr3g0101061 38.144 97 58 1 9 105 41 135 1.40e-16 76.3
Msa0550150 MtrunA17_Chr3g0127751 40.230 87 51 1 9 95 27 112 1.92e-16 73.9
Msa0550150 MtrunA17_Chr6g0481071 37.931 87 54 0 9 95 96 182 4.37e-16 72.0
Msa0550150 MtrunA17_Chr3g0088511 44.595 74 41 0 9 82 33 106 6.34e-16 70.1
Msa0550150 MtrunA17_Chr5g0426311 44.737 76 41 1 9 84 17 91 7.50e-16 72.8
Msa0550150 MtrunA17_Chr8g0346011 33.582 134 73 4 9 128 38 169 1.45e-15 72.4
Msa0550150 MtrunA17_Chr7g0276531 50.847 59 29 0 9 67 19 77 3.02e-15 70.9
Msa0550150 MtrunA17_Chr4g0018581 34.884 129 80 2 10 137 453 578 3.43e-15 72.0
Msa0550150 MtrunA17_Chr1g0186351 35.443 79 49 1 9 87 7 83 4.68e-15 71.6
Msa0550150 MtrunA17_Chr1g0186351 27.097 155 98 2 9 149 113 266 1.35e-12 64.7
Msa0550150 MtrunA17_Chr7g0263001 40.506 79 47 0 9 87 36 114 4.92e-15 68.2
Msa0550150 MtrunA17_Chr5g0447761 36.082 97 60 1 9 105 7 101 6.12e-15 71.2
Msa0550150 MtrunA17_Chr5g0447761 32.184 87 58 1 9 95 107 192 4.54e-11 60.1
Msa0550150 MtrunA17_Chr2g0290191 36.709 79 48 1 9 87 5 81 2.65e-14 69.3
Msa0550150 MtrunA17_Chr3g0120721 32.847 137 83 2 9 145 107 234 3.17e-14 68.9
Msa0550150 MtrunA17_Chr3g0120721 42.857 77 35 1 9 85 19 86 3.41e-13 66.2
Msa0550150 MtrunA17_Chr7g0219031 40.909 66 39 0 9 74 41 106 6.36e-14 64.7
Msa0550150 MtrunA17_Chr2g0327921 35.366 82 53 0 9 90 8 89 2.65e-13 62.0
Msa0550150 MtrunA17_Chr6g0449481 38.554 83 49 1 9 91 46 126 2.82e-13 66.2
Msa0550150 MtrunA17_Chr4g0042161 39.286 84 45 2 11 91 54 134 3.94e-13 63.2
Msa0550150 MtrunA17_Chr4g0062931 34.132 167 84 6 10 164 9 161 6.87e-13 65.5
Msa0550150 MtrunA17_Chr7g0267571 36.667 90 57 0 4 93 208 297 9.95e-13 64.7
Msa0550150 MtrunA17_Chr4g0065741 34.783 92 59 1 9 100 72 162 1.63e-12 62.0
Msa0550150 MtrunA17_Chr4g0031091 38.356 73 45 0 9 81 34 106 4.04e-12 59.7
Msa0550150 MtrunA17_Chr3g0135111 35.714 98 57 2 9 102 11 106 4.35e-12 62.8
Msa0550150 MtrunA17_Chr5g0402191 41.250 80 43 2 9 87 5 81 9.61e-12 62.0
Msa0550150 MtrunA17_Chr3g0110211 38.889 90 54 1 3 91 107 196 3.24e-11 60.5
Msa0550150 MtrunA17_Chr5g0419351 38.554 83 51 0 10 92 12 94 4.15e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0550150 AT2G21660.2 84.706 85 13 0 1 85 1 85 8.18e-49 155
Msa0550150 AT2G21660.1 84.706 85 13 0 1 85 1 85 1.38e-48 155
Msa0550150 AT4G39260.3 78.889 90 19 0 4 93 2 91 1.79e-48 152
Msa0550150 AT4G39260.2 76.829 82 19 0 4 85 2 83 2.14e-43 140
Msa0550150 AT4G39260.1 76.829 82 19 0 4 85 2 83 7.85e-43 140
Msa0550150 AT3G26420.1 51.429 105 49 1 3 107 2 104 2.66e-31 113
Msa0550150 AT4G39260.4 59.259 108 18 1 4 111 2 83 6.74e-28 100
Msa0550150 AT3G23830.2 50.602 83 41 0 9 91 36 118 1.83e-24 92.8
Msa0550150 AT3G23830.1 50.602 83 41 0 9 91 36 118 1.83e-24 92.8
Msa0550150 AT4G13850.4 51.852 81 39 0 9 89 36 116 2.34e-24 92.4
Msa0550150 AT4G13850.2 50.602 83 41 0 9 91 36 118 2.52e-24 92.8
Msa0550150 AT5G61030.2 48.101 79 41 0 9 87 41 119 2.75e-23 93.6
Msa0550150 AT5G61030.1 48.101 79 41 0 9 87 41 119 2.75e-23 93.6
Msa0550150 AT4G13850.3 51.064 94 46 0 9 102 36 129 3.77e-23 89.7
Msa0550150 AT4G13850.1 51.064 94 46 0 9 102 36 129 5.38e-23 89.7
Msa0550150 AT5G04280.1 46.465 99 52 1 9 107 8 105 1.90e-21 89.0
Msa0550150 AT5G50250.1 45.783 83 45 0 5 87 204 286 2.44e-21 88.2
Msa0550150 AT5G50250.1 34.483 145 83 3 7 144 112 251 5.40e-16 73.9
Msa0550150 AT2G21690.1 50.000 90 40 1 3 87 2 91 2.49e-21 84.0
Msa0550150 AT3G53460.1 44.578 83 46 0 9 91 258 340 3.73e-21 88.6
Msa0550150 AT3G53460.3 44.578 83 46 0 9 91 258 340 3.73e-21 88.6
Msa0550150 AT3G53460.2 44.578 83 46 0 9 91 258 340 3.73e-21 88.6
Msa0550150 AT2G37220.1 44.444 81 45 0 9 89 205 285 4.36e-21 87.4
Msa0550150 AT2G37220.1 41.250 80 45 1 3 82 88 165 2.48e-11 60.8
Msa0550150 AT3G53460.4 44.578 83 46 0 9 91 279 361 4.94e-21 88.2
Msa0550150 AT4G24770.1 43.902 82 46 0 8 89 244 325 5.04e-21 87.8
Msa0550150 AT4G24770.1 37.815 119 65 2 7 118 149 265 5.58e-16 73.9
Msa0550150 AT4G24770.2 43.902 82 46 0 8 89 244 325 5.04e-21 87.8
Msa0550150 AT4G24770.2 37.815 119 65 2 7 118 149 265 5.58e-16 73.9
Msa0550150 AT1G74230.1 52.632 76 35 1 9 84 35 109 3.79e-20 85.1
Msa0550150 AT1G60650.2 38.095 126 73 2 5 125 9 134 7.03e-20 84.3
Msa0550150 AT1G60650.1 38.095 126 73 2 5 125 9 134 7.03e-20 84.3
Msa0550150 AT5G06210.1 41.573 89 52 0 6 94 32 120 3.19e-19 79.3
Msa0550150 AT1G76460.1 48.684 76 38 1 9 84 25 99 4.11e-18 79.3
Msa0550150 AT1G20880.2 47.368 76 39 1 9 84 25 99 5.68e-18 79.0
Msa0550150 AT1G20880.3 47.368 76 39 1 9 84 25 99 5.68e-18 79.0
Msa0550150 AT1G20880.1 47.368 76 39 1 9 84 25 99 5.68e-18 79.0
Msa0550150 AT1G18630.1 44.872 78 43 0 9 86 37 114 1.59e-17 75.5
Msa0550150 AT1G22330.1 42.308 104 58 2 9 112 18 119 2.33e-17 77.4
Msa0550150 AT5G55550.2 35.780 109 68 1 9 117 7 113 3.25e-17 78.2
Msa0550150 AT5G55550.3 35.780 109 68 1 9 117 7 113 3.25e-17 78.2
Msa0550150 AT5G55550.6 35.780 109 68 1 9 117 7 113 3.25e-17 78.2
Msa0550150 AT5G55550.11 35.780 109 68 1 9 117 7 113 3.25e-17 78.2
Msa0550150 AT5G55550.5 35.780 109 68 1 9 117 7 113 3.44e-17 78.2
Msa0550150 AT5G55550.4 35.780 109 68 1 9 117 7 113 3.44e-17 78.2
Msa0550150 AT5G55550.9 35.780 109 68 1 9 117 7 113 3.44e-17 78.2
Msa0550150 AT5G55550.7 35.780 109 68 1 9 117 7 113 3.44e-17 78.2
Msa0550150 AT5G55550.1 35.780 109 68 1 9 117 7 113 3.44e-17 78.2
Msa0550150 AT1G22910.1 40.404 99 54 3 5 99 9 106 8.96e-17 75.5
Msa0550150 AT1G22910.2 40.404 99 54 3 5 99 9 106 1.13e-16 75.1
Msa0550150 AT2G46780.1 43.421 76 42 1 9 84 23 97 1.68e-16 75.5
Msa0550150 AT2G46780.2 43.421 76 42 1 9 84 23 97 1.68e-16 75.5
Msa0550150 AT3G07810.2 41.772 79 44 1 9 87 7 83 1.71e-16 76.3
Msa0550150 AT3G07810.1 41.772 79 44 1 9 87 7 83 1.74e-16 76.3
Msa0550150 AT4G26650.2 34.951 103 65 1 9 111 13 113 3.52e-16 75.1
Msa0550150 AT4G26650.1 34.951 103 65 1 9 111 16 116 3.57e-16 75.1
Msa0550150 AT1G22910.3 40.404 99 54 3 5 99 9 106 6.83e-16 73.9
Msa0550150 AT4G14300.1 36.667 90 55 1 9 98 7 94 1.47e-15 73.6
Msa0550150 AT4G14300.2 36.667 90 55 1 9 98 7 94 1.47e-15 73.6
Msa0550150 AT2G33410.1 34.831 89 56 1 9 97 7 93 1.67e-15 73.2
Msa0550150 AT2G33410.1 36.709 79 49 1 9 87 111 188 3.36e-11 60.8
Msa0550150 AT1G78260.1 43.210 81 44 2 5 84 13 92 2.30e-15 72.0
Msa0550150 AT1G60000.1 40.244 82 49 0 4 85 173 254 2.41e-15 71.6
Msa0550150 AT4G13860.1 41.892 74 43 0 9 82 4 77 2.48e-15 67.8
Msa0550150 AT1G33470.3 37.895 95 53 2 9 98 8 101 3.71e-15 70.9
Msa0550150 AT3G13224.3 37.234 94 53 2 6 95 4 95 4.06e-15 72.0
Msa0550150 AT3G13224.3 31.633 98 64 1 9 106 101 195 3.95e-13 66.2
Msa0550150 AT1G33470.2 37.895 95 53 2 9 98 8 101 4.28e-15 70.9
Msa0550150 AT1G33470.1 37.895 95 53 2 9 98 8 101 4.29e-15 70.9
Msa0550150 AT1G78260.2 43.210 81 44 2 5 84 13 92 4.37e-15 71.2
Msa0550150 AT3G13224.2 37.931 87 52 1 9 95 20 104 5.86e-15 71.6
Msa0550150 AT3G13224.2 32.955 88 58 1 3 89 103 190 2.00e-13 67.0
Msa0550150 AT5G19960.1 39.640 111 63 3 10 119 9 116 9.21e-15 70.9
Msa0550150 AT5G47320.1 41.558 77 45 0 9 85 32 108 9.26e-15 69.3
Msa0550150 AT5G59865.1 43.038 79 45 0 11 89 29 107 9.31e-15 67.0
Msa0550150 AT3G08000.1 41.667 84 49 0 9 92 42 125 1.27e-14 67.4
Msa0550150 AT3G54770.3 44.737 76 41 1 9 84 18 92 1.43e-14 69.7
Msa0550150 AT3G54770.1 44.737 76 41 1 9 84 18 92 1.52e-14 69.3
Msa0550150 AT5G55550.8 43.662 71 38 1 9 79 7 75 2.74e-14 69.7
Msa0550150 AT2G14160.1 40.698 86 32 2 1 68 1 85 3.00e-14 65.1
Msa0550150 AT2G37510.1 43.243 74 42 0 9 82 35 108 3.09e-14 66.2
Msa0550150 AT5G55550.10 43.662 71 38 1 9 79 7 75 3.38e-14 69.7
Msa0550150 AT3G46020.1 38.462 78 48 0 9 86 8 85 1.22e-13 63.9
Msa0550150 AT1G17640.2 40.000 80 46 1 9 88 67 144 1.31e-13 67.8
Msa0550150 AT1G17640.2 35.366 82 53 0 9 90 158 239 2.69e-11 61.2
Msa0550150 AT1G17640.1 40.000 80 46 1 9 88 67 144 1.31e-13 67.8
Msa0550150 AT1G17640.1 35.366 82 53 0 9 90 158 239 2.69e-11 61.2
Msa0550150 AT1G17640.3 40.000 80 46 1 9 88 67 144 1.31e-13 67.8
Msa0550150 AT1G17640.3 35.366 82 53 0 9 90 158 239 2.69e-11 61.2
Msa0550150 AT3G13224.1 37.931 87 52 1 9 95 20 104 1.73e-13 66.2
Msa0550150 AT5G53720.1 41.250 80 46 1 5 84 6 84 1.74e-13 63.2
Msa0550150 AT3G52150.2 39.759 83 50 0 2 84 171 253 2.67e-13 65.9
Msa0550150 AT3G52150.1 39.759 83 50 0 2 84 171 253 2.67e-13 65.9
Msa0550150 AT1G01080.1 37.975 79 44 2 7 83 211 286 3.28e-13 66.2
Msa0550150 AT1G01080.2 37.975 79 44 2 7 83 212 287 3.40e-13 66.2
Msa0550150 AT5G51300.1 30.400 125 86 1 7 131 479 602 3.92e-13 66.6
Msa0550150 AT5G51300.2 30.400 125 86 1 7 131 479 602 3.92e-13 66.6
Msa0550150 AT5G51300.3 30.400 125 86 1 7 131 479 602 3.92e-13 66.6
Msa0550150 AT2G27330.1 26.667 90 66 0 10 99 23 112 9.31e-13 62.0
Msa0550150 AT1G73530.1 35.000 80 52 0 9 88 78 157 9.73e-13 63.2
Msa0550150 AT5G47620.1 35.443 79 49 1 9 87 7 83 9.97e-13 65.5
Msa0550150 AT5G47620.2 35.443 79 49 1 9 87 7 83 9.97e-13 65.5
Msa0550150 AT5G47620.5 35.443 79 49 1 9 87 7 83 9.97e-13 65.5
Msa0550150 AT5G40490.1 43.210 81 44 1 9 89 43 121 1.13e-12 65.1
Msa0550150 AT5G53680.1 44.928 69 37 1 9 77 14 81 1.16e-12 62.8
Msa0550150 AT5G54580.1 43.590 78 44 0 10 87 58 135 2.91e-12 61.6
Msa0550150 AT5G11412.1 43.373 83 45 2 3 84 46 127 5.30e-12 61.2
Msa0550150 AT5G47620.4 47.059 51 27 0 9 59 7 57 1.20e-11 62.4
Msa0550150 AT4G13860.2 44.068 59 33 0 24 82 2 60 1.51e-11 57.4
Msa0550150 AT3G06970.1 26.016 123 87 2 9 128 13 134 1.62e-11 61.6
Msa0550150 AT3G47120.2 38.667 75 46 0 10 84 38 112 2.01e-11 61.2
Msa0550150 AT3G47120.1 39.189 74 45 0 11 84 39 112 2.04e-11 61.2
Msa0550150 AT1G58470.2 40.541 74 39 2 8 77 6 78 2.97e-11 60.8
Msa0550150 AT1G58470.1 40.541 74 39 2 8 77 6 78 2.97e-11 60.8
Msa0550150 AT5G64200.2 37.179 78 49 0 8 85 16 93 3.98e-11 60.5
Msa0550150 AT5G64200.1 37.179 78 49 0 8 85 16 93 3.98e-11 60.5
Msa0550150 AT3G52380.1 35.714 84 54 0 4 87 215 298 4.69e-11 60.5
Msa0550150 AT3G52380.1 37.838 74 46 0 9 82 117 190 4.83e-11 60.1
Msa0550150 AT3G56860.9 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.11 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.8 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.5 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.7 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.2 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.6 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.10 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.3 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.1 41.270 63 37 0 5 67 137 199 8.51e-11 59.7
Msa0550150 AT3G56860.4 41.270 63 37 0 5 67 137 199 8.51e-11 59.7

Find 76 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGAGGTGGTGGTGGATA+TGG 0.277157 4_1:+45564362 Msa0550150:CDS
GGCCGTGGTGGCGGTGGATA+TGG 0.293898 4_1:+45564341 Msa0550150:CDS
ACTGGAAGATCAAGAGGATT+TGG 0.294131 4_1:+45564194 Msa0550150:CDS
GGTTATGGAGGAGGTGGTGG+TGG 0.326562 4_1:+45564437 Msa0550150:CDS
GGTGGTTATGGAGGAGGTGG+TGG 0.328302 4_1:+45564434 Msa0550150:CDS
AGTGGTGGTGGAGGTGGTTA+TGG 0.334178 4_1:+45564422 Msa0550150:CDS
GGTGGATATGGTGGAGGTGG+TGG 0.349052 4_1:+45564353 Msa0550150:CDS
ATTATCAACGATCGTGAAAC+TGG 0.354445 4_1:+45564176 Msa0550150:CDS
GGTGGTAGGGACCGTGGTTA+TGG 0.354584 4_1:+45564470 Msa0550150:CDS
GTGGTGGTTATGGTGGTGGT+AGG 0.359680 4_1:+45564456 Msa0550150:CDS
GGAGGTGGTGGTGGATATGG+CGG 0.376984 4_1:+45564365 Msa0550150:CDS
GGTGGAGGAGGCCGTGGTGG+CGG 0.386911 4_1:+45564332 Msa0550150:CDS
GGATATGGTGGAGGTGGTGG+TGG 0.393513 4_1:+45564356 Msa0550150:CDS
TATGGAGGAGGTGGTGGTGG+TGG 0.393935 4_1:+45564440 Msa0550150:CDS
GGAGGAGGCCGTGGTGGCGG+TGG 0.397234 4_1:+45564335 Msa0550150:CDS
CAGAGCCGTGGTAGCGGTGG+TGG 0.401834 4_1:+45564314 Msa0550150:CDS
GGCGGTGGATATGGTGGAGG+TGG 0.414719 4_1:+45564350 Msa0550150:CDS
GGTGGAGGTGGTTATGGAGG+AGG 0.420020 4_1:+45564428 Msa0550150:CDS
GTGGAGATGGTGGAGGAAGC+TGG 0.423465 4_1:+45564531 Msa0550150:CDS
GGAGGTGGTTATGGAGGAGG+TGG 0.426099 4_1:+45564431 Msa0550150:CDS
AGCGGTGGTGGAGGAGGCCG+TGG 0.429688 4_1:+45564326 Msa0550150:CDS
AGGGATGAACGGTTCAGATA+TGG 0.435664 4_1:+45564262 Msa0550150:CDS
GCTTCGTCGGAGGTCTTGCA+TGG 0.446995 4_1:+45563771 Msa0550150:CDS
GGTGGTGGTGGATATGGCGG+AGG 0.453193 4_1:+45564368 Msa0550150:CDS
GGTGGTGGATATGGCGGAGG+TGG 0.460996 4_1:+45564371 Msa0550150:CDS
GGTGGTGGAGGTGGTTATGG+AGG 0.464167 4_1:+45564425 Msa0550150:CDS
TATTCTTCACGCGGTGGAGA+TGG 0.477424 4_1:+45564518 Msa0550150:CDS
CGTGGTAGCGGTGGTGGAGG+AGG 0.477687 4_1:+45564320 Msa0550150:CDS
TGGTGGTTATGGTGGTGGTA+GGG 0.478980 4_1:+45564457 Msa0550150:CDS
GGTGGTGGTGGTTATGGTGG+TGG 0.479742 4_1:+45564452 Msa0550150:CDS
AGCCGTGGTAGCGGTGGTGG+AGG 0.481554 4_1:+45564317 Msa0550150:CDS
GGTTATGGTGGTGGAGATGA+TGG 0.485104 4_1:+45564485 Msa0550150:CDS
GTTGAGTACCGTTGCTTCGT+CGG 0.485717 4_1:+45563758 Msa0550150:CDS
AGAAGCAGTGGTGGTGGAGG+TGG 0.500860 4_1:+45564416 Msa0550150:CDS
TCGATGAGAGATGCGATTGA+AGG 0.506178 4_1:+45564242 Msa0550150:CDS
TACAGCAGAAGCAGTGGTGG+TGG 0.506540 4_1:+45564410 Msa0550150:CDS
GGCGGAGGTGGTCGCCGCGA+GGG 0.508855 4_1:+45564383 Msa0550150:CDS
AGCAGAAGCAGTGGTGGTGG+AGG 0.523650 4_1:+45564413 Msa0550150:CDS
GAGGCTCAGAGCCGTGGTAG+CGG 0.524200 4_1:+45564308 Msa0550150:CDS
AGGGACCGTGGTTATGGTGG+TGG 0.524349 4_1:+45564476 Msa0550150:CDS
GAGAAAGCCTTCTCTCAATA+CGG 0.531059 4_1:+45563815 Msa0550150:CDS
CGATGAGAGATGCGATTGAA+GGG 0.538221 4_1:+45564243 Msa0550150:CDS
TCTTCACGCGGTGGAGATGG+TGG 0.540242 4_1:+45564521 Msa0550150:CDS
CTTCGTCGGAGGTCTTGCAT+GGG 0.553297 4_1:+45563772 Msa0550150:CDS
CGTGGTGGCGGTGGATATGG+TGG 0.562612 4_1:+45564344 Msa0550150:CDS
GGAGGTGGTCGCCGCGAGGG+TGG 0.563434 4_1:+45564386 Msa0550150:CDS
CGGAGAAATCATCGATTCGA+AGG 0.564623 4_1:+45563835 Msa0550150:CDS
CTCGAGAGCTTCGCTATCGG+TGG 0.564705 4_1:-45563795 None:intergenic
GCTCAGAGCCGTGGTAGCGG+TGG 0.565666 4_1:+45564311 Msa0550150:CDS
GGTAGGGACCGTGGTTATGG+TGG 0.569427 4_1:+45564473 Msa0550150:CDS
GATTTCTCCGTATTGAGAGA+AGG 0.569467 4_1:-45563822 None:intergenic
CACCATATCCACCGCCACCA+CGG 0.571564 4_1:-45564343 None:intergenic
TCCACCGCGTGAAGAATAGC+GGG 0.572176 4_1:-45564513 None:intergenic
CGTGAAACTGGAAGATCAAG+AGG 0.575579 4_1:+45564188 Msa0550150:CDS
TATGGTGGTGGAGATGATGG+TGG 0.576911 4_1:+45564488 Msa0550150:CDS
GGTGGCGGTGGATATGGTGG+AGG 0.578322 4_1:+45564347 Msa0550150:CDS
TTTCTCGAGAGCTTCGCTAT+CGG 0.583736 4_1:-45563798 None:intergenic
AAGGAACATTACTGTGAATG+AGG 0.589832 4_1:+45564289 Msa0550150:CDS
CTCCTCCACCACCGCTACCA+CGG 0.595147 4_1:-45564319 None:intergenic
GGTGGTGGAGGAGGCCGTGG+TGG 0.601880 4_1:+45564329 Msa0550150:CDS
CAAGACCTCCGACGAAGCAA+CGG 0.604652 4_1:-45563766 None:intergenic
TCCCGCTATTCTTCACGCGG+TGG 0.608702 4_1:+45564512 Msa0550150:CDS
TCACGCGGTGGAGATGGTGG+AGG 0.610396 4_1:+45564524 Msa0550150:CDS
CTCCACCGCGTGAAGAATAG+CGG 0.613449 4_1:-45564514 None:intergenic
GAGTACCGTTGCTTCGTCGG+AGG 0.615538 4_1:+45563761 Msa0550150:CDS
GGTTACAGCAGAAGCAGTGG+TGG 0.617302 4_1:+45564407 Msa0550150:CDS
TGGCGGAGGTGGTCGCCGCG+AGG 0.618580 4_1:+45564382 Msa0550150:CDS
GTGAATGAGGCTCAGAGCCG+TGG 0.629363 4_1:+45564302 Msa0550150:CDS
GGTGGTTACAGCAGAAGCAG+TGG 0.635095 4_1:+45564404 Msa0550150:CDS
TATGGTGGTGGTAGGGACCG+TGG 0.636326 4_1:+45564464 Msa0550150:CDS
GATGCGATTGAAGGGATGAA+CGG 0.651599 4_1:+45564251 Msa0550150:CDS
ACGGTTCAGATATGGATGGA+AGG 0.652700 4_1:+45564270 Msa0550150:CDS
ATGAACGGTTCAGATATGGA+TGG 0.654412 4_1:+45564266 Msa0550150:CDS
GGTTCCCGCTATTCTTCACG+CGG 0.677830 4_1:+45564509 Msa0550150:CDS
CATCTCCACCACCATAACCA+CGG 0.721401 4_1:-45564481 None:intergenic
TTCTGCTGTAACCACCCTCG+CGG 0.741441 4_1:-45564397 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGTTTTAGTTTTTTCATCAA+TGG + chr4_1:45563724-45563743 Msa0550150:exon 20.0%
!!! TGTTTTAGTTTTTTCATCAA+TGG + chr4_1:45563724-45563743 Msa0550150:exon 20.0%
!!! GATCTGACACGATTTTGATT+CGG + chr4_1:45563889-45563908 Msa0550150:intron 35.0%
AGATAGATCACAGATCAGAA+AGG - chr4_1:45563928-45563947 None:intergenic 35.0%
! ATTTTGTTACTCACCCCAAT+AGG + chr4_1:45564034-45564053 Msa0550150:intron 35.0%
TGAAGATGAACGTACCTATT+GGG - chr4_1:45564051-45564070 None:intergenic 35.0%
ATGAAGATGAACGTACCTAT+TGG - chr4_1:45564052-45564071 None:intergenic 35.0%
ACCAAAAGAAGAAGATCGAT+CGG + chr4_1:45564078-45564097 Msa0550150:intron 35.0%
AAGATCGATCGGTTACTATA+TGG + chr4_1:45564089-45564108 Msa0550150:intron 35.0%
ATTATCAACGATCGTGAAAC+TGG + chr4_1:45564176-45564195 Msa0550150:CDS 35.0%
AAGGAACATTACTGTGAATG+AGG + chr4_1:45564289-45564308 Msa0550150:CDS 35.0%
!!! GATCTGACACGATTTTGATT+CGG + chr4_1:45563889-45563908 Msa0550150:intron 35.0%
AGATAGATCACAGATCAGAA+AGG - chr4_1:45563928-45563947 None:intergenic 35.0%
! ATTTTGTTACTCACCCCAAT+AGG + chr4_1:45564034-45564053 Msa0550150:intron 35.0%
TGAAGATGAACGTACCTATT+GGG - chr4_1:45564051-45564070 None:intergenic 35.0%
ATGAAGATGAACGTACCTAT+TGG - chr4_1:45564052-45564071 None:intergenic 35.0%
ACCAAAAGAAGAAGATCGAT+CGG + chr4_1:45564078-45564097 Msa0550150:intron 35.0%
AAGATCGATCGGTTACTATA+TGG + chr4_1:45564089-45564108 Msa0550150:intron 35.0%
ATTATCAACGATCGTGAAAC+TGG + chr4_1:45564176-45564195 Msa0550150:CDS 35.0%
AAGGAACATTACTGTGAATG+AGG + chr4_1:45564289-45564308 Msa0550150:CDS 35.0%
GAGAAAGCCTTCTCTCAATA+CGG + chr4_1:45563815-45563834 Msa0550150:CDS 40.0%
GATTTCTCCGTATTGAGAGA+AGG - chr4_1:45563825-45563844 None:intergenic 40.0%
CAGAGTAACACAGAACAGAT+CGG - chr4_1:45563951-45563970 None:intergenic 40.0%
GAAGATGAACGTACCTATTG+GGG - chr4_1:45564050-45564069 None:intergenic 40.0%
! ACCGATCGATCTTCTTCTTT+TGG - chr4_1:45564082-45564101 None:intergenic 40.0%
ACTGGAAGATCAAGAGGATT+TGG + chr4_1:45564194-45564213 Msa0550150:CDS 40.0%
ATGAACGGTTCAGATATGGA+TGG + chr4_1:45564266-45564285 Msa0550150:CDS 40.0%
GAGAAAGCCTTCTCTCAATA+CGG + chr4_1:45563815-45563834 Msa0550150:CDS 40.0%
GATTTCTCCGTATTGAGAGA+AGG - chr4_1:45563825-45563844 None:intergenic 40.0%
CAGAGTAACACAGAACAGAT+CGG - chr4_1:45563951-45563970 None:intergenic 40.0%
GAAGATGAACGTACCTATTG+GGG - chr4_1:45564050-45564069 None:intergenic 40.0%
! ACCGATCGATCTTCTTCTTT+TGG - chr4_1:45564082-45564101 None:intergenic 40.0%
ACTGGAAGATCAAGAGGATT+TGG + chr4_1:45564194-45564213 Msa0550150:CDS 40.0%
ATGAACGGTTCAGATATGGA+TGG + chr4_1:45564266-45564285 Msa0550150:CDS 40.0%
TTTCTCGAGAGCTTCGCTAT+CGG - chr4_1:45563801-45563820 None:intergenic 45.0%
!! CGGAGAAATCATCGATTCGA+AGG + chr4_1:45563835-45563854 Msa0550150:CDS 45.0%
!! TTTGTGTTGCTTGCAGGCTT+CGG + chr4_1:45563862-45563881 Msa0550150:intron 45.0%
CGTGAAACTGGAAGATCAAG+AGG + chr4_1:45564188-45564207 Msa0550150:CDS 45.0%
TCGATGAGAGATGCGATTGA+AGG + chr4_1:45564242-45564261 Msa0550150:CDS 45.0%
CGATGAGAGATGCGATTGAA+GGG + chr4_1:45564243-45564262 Msa0550150:CDS 45.0%
GATGCGATTGAAGGGATGAA+CGG + chr4_1:45564251-45564270 Msa0550150:CDS 45.0%
AGGGATGAACGGTTCAGATA+TGG + chr4_1:45564262-45564281 Msa0550150:CDS 45.0%
ACGGTTCAGATATGGATGGA+AGG + chr4_1:45564270-45564289 Msa0550150:CDS 45.0%
TTTCTCGAGAGCTTCGCTAT+CGG - chr4_1:45563801-45563820 None:intergenic 45.0%
!! CGGAGAAATCATCGATTCGA+AGG + chr4_1:45563835-45563854 Msa0550150:CDS 45.0%
!! TTTGTGTTGCTTGCAGGCTT+CGG + chr4_1:45563862-45563881 Msa0550150:intron 45.0%
CGTGAAACTGGAAGATCAAG+AGG + chr4_1:45564188-45564207 Msa0550150:CDS 45.0%
TCGATGAGAGATGCGATTGA+AGG + chr4_1:45564242-45564261 Msa0550150:CDS 45.0%
CGATGAGAGATGCGATTGAA+GGG + chr4_1:45564243-45564262 Msa0550150:CDS 45.0%
GATGCGATTGAAGGGATGAA+CGG + chr4_1:45564251-45564270 Msa0550150:CDS 45.0%
AGGGATGAACGGTTCAGATA+TGG + chr4_1:45564262-45564281 Msa0550150:CDS 45.0%
ACGGTTCAGATATGGATGGA+AGG + chr4_1:45564270-45564289 Msa0550150:CDS 45.0%
! GTTGAGTACCGTTGCTTCGT+CGG + chr4_1:45563758-45563777 Msa0550150:CDS 50.0%
!! GGTCTGTTTGTGTTGCTTGC+AGG + chr4_1:45563856-45563875 Msa0550150:intron 50.0%
!! TGGTGGTTATGGTGGTGGTA+GGG + chr4_1:45564457-45564476 Msa0550150:CDS 50.0%
CATCTCCACCACCATAACCA+CGG - chr4_1:45564484-45564503 None:intergenic 50.0%
!! GGTTATGGTGGTGGAGATGA+TGG + chr4_1:45564485-45564504 Msa0550150:CDS 50.0%
!! TATGGTGGTGGAGATGATGG+TGG + chr4_1:45564488-45564507 Msa0550150:CDS 50.0%
TATTCTTCACGCGGTGGAGA+TGG + chr4_1:45564518-45564537 Msa0550150:CDS 50.0%
! GTTGAGTACCGTTGCTTCGT+CGG + chr4_1:45563758-45563777 Msa0550150:CDS 50.0%
!! GGTCTGTTTGTGTTGCTTGC+AGG + chr4_1:45563856-45563875 Msa0550150:intron 50.0%
!! TGGTGGTTATGGTGGTGGTA+GGG + chr4_1:45564457-45564476 Msa0550150:CDS 50.0%
CATCTCCACCACCATAACCA+CGG - chr4_1:45564484-45564503 None:intergenic 50.0%
!! GGTTATGGTGGTGGAGATGA+TGG + chr4_1:45564485-45564504 Msa0550150:CDS 50.0%
!! TATGGTGGTGGAGATGATGG+TGG + chr4_1:45564488-45564507 Msa0550150:CDS 50.0%
TATTCTTCACGCGGTGGAGA+TGG + chr4_1:45564518-45564537 Msa0550150:CDS 50.0%
CAAGACCTCCGACGAAGCAA+CGG - chr4_1:45563769-45563788 None:intergenic 55.0%
CTTCGTCGGAGGTCTTGCAT+GGG + chr4_1:45563772-45563791 Msa0550150:CDS 55.0%
GTTGCTTGCAGGCTTCGGAT+CGG + chr4_1:45563867-45563886 Msa0550150:intron 55.0%
TTCTGCTGTAACCACCCTCG+CGG - chr4_1:45564400-45564419 None:intergenic 55.0%
GGTGGTTACAGCAGAAGCAG+TGG + chr4_1:45564404-45564423 Msa0550150:CDS 55.0%
GGTTACAGCAGAAGCAGTGG+TGG + chr4_1:45564407-45564426 Msa0550150:CDS 55.0%
TACAGCAGAAGCAGTGGTGG+TGG + chr4_1:45564410-45564429 Msa0550150:CDS 55.0%
!! AGTGGTGGTGGAGGTGGTTA+TGG + chr4_1:45564422-45564441 Msa0550150:CDS 55.0%
!! GTGGTGGTTATGGTGGTGGT+AGG + chr4_1:45564456-45564475 Msa0550150:CDS 55.0%
GGTTCCCGCTATTCTTCACG+CGG + chr4_1:45564509-45564528 Msa0550150:CDS 55.0%
TCCACCGCGTGAAGAATAGC+GGG - chr4_1:45564516-45564535 None:intergenic 55.0%
CTCCACCGCGTGAAGAATAG+CGG - chr4_1:45564517-45564536 None:intergenic 55.0%
CAAGACCTCCGACGAAGCAA+CGG - chr4_1:45563769-45563788 None:intergenic 55.0%
CTTCGTCGGAGGTCTTGCAT+GGG + chr4_1:45563772-45563791 Msa0550150:CDS 55.0%
GTTGCTTGCAGGCTTCGGAT+CGG + chr4_1:45563867-45563886 Msa0550150:intron 55.0%
TTCTGCTGTAACCACCCTCG+CGG - chr4_1:45564400-45564419 None:intergenic 55.0%
GGTGGTTACAGCAGAAGCAG+TGG + chr4_1:45564404-45564423 Msa0550150:CDS 55.0%
GGTTACAGCAGAAGCAGTGG+TGG + chr4_1:45564407-45564426 Msa0550150:CDS 55.0%
TACAGCAGAAGCAGTGGTGG+TGG + chr4_1:45564410-45564429 Msa0550150:CDS 55.0%
!! AGTGGTGGTGGAGGTGGTTA+TGG + chr4_1:45564422-45564441 Msa0550150:CDS 55.0%
!! GTGGTGGTTATGGTGGTGGT+AGG + chr4_1:45564456-45564475 Msa0550150:CDS 55.0%
GGTTCCCGCTATTCTTCACG+CGG + chr4_1:45564509-45564528 Msa0550150:CDS 55.0%
TCCACCGCGTGAAGAATAGC+GGG - chr4_1:45564516-45564535 None:intergenic 55.0%
CTCCACCGCGTGAAGAATAG+CGG - chr4_1:45564517-45564536 None:intergenic 55.0%
! GAGTACCGTTGCTTCGTCGG+AGG + chr4_1:45563761-45563780 Msa0550150:CDS 60.0%
GCTTCGTCGGAGGTCTTGCA+TGG + chr4_1:45563771-45563790 Msa0550150:CDS 60.0%
CTCGAGAGCTTCGCTATCGG+TGG - chr4_1:45563798-45563817 None:intergenic 60.0%
GTGAATGAGGCTCAGAGCCG+TGG + chr4_1:45564302-45564321 Msa0550150:CDS 60.0%
CACCATATCCACCGCCACCA+CGG - chr4_1:45564346-45564365 None:intergenic 60.0%
! GGTGGATATGGTGGAGGTGG+TGG + chr4_1:45564353-45564372 Msa0550150:CDS 60.0%
! GGATATGGTGGAGGTGGTGG+TGG + chr4_1:45564356-45564375 Msa0550150:CDS 60.0%
!! GGTGGAGGTGGTGGTGGATA+TGG + chr4_1:45564362-45564381 Msa0550150:CDS 60.0%
!! GGAGGTGGTGGTGGATATGG+CGG + chr4_1:45564365-45564384 Msa0550150:CDS 60.0%
!! AGCAGAAGCAGTGGTGGTGG+AGG + chr4_1:45564413-45564432 Msa0550150:CDS 60.0%
!! AGAAGCAGTGGTGGTGGAGG+TGG + chr4_1:45564416-45564435 Msa0550150:CDS 60.0%
!! GGTGGTGGAGGTGGTTATGG+AGG + chr4_1:45564425-45564444 Msa0550150:CDS 60.0%
GGTGGAGGTGGTTATGGAGG+AGG + chr4_1:45564428-45564447 Msa0550150:CDS 60.0%
GGAGGTGGTTATGGAGGAGG+TGG + chr4_1:45564431-45564450 Msa0550150:CDS 60.0%
GGTGGTTATGGAGGAGGTGG+TGG + chr4_1:45564434-45564453 Msa0550150:CDS 60.0%
! GGTTATGGAGGAGGTGGTGG+TGG + chr4_1:45564437-45564456 Msa0550150:CDS 60.0%
!! TATGGAGGAGGTGGTGGTGG+TGG + chr4_1:45564440-45564459 Msa0550150:CDS 60.0%
!! GGAGGTGGTGGTGGTGGTTA+TGG + chr4_1:45564446-45564465 Msa0550150:CDS 60.0%
!! GGTGGTGGTGGTGGTTATGG+TGG + chr4_1:45564449-45564468 Msa0550150:CDS 60.0%
!! GGTGGTGGTGGTTATGGTGG+TGG + chr4_1:45564452-45564471 Msa0550150:CDS 60.0%
!! TATGGTGGTGGTAGGGACCG+TGG + chr4_1:45564464-45564483 Msa0550150:CDS 60.0%
GGTGGTAGGGACCGTGGTTA+TGG + chr4_1:45564470-45564489 Msa0550150:CDS 60.0%
GGTAGGGACCGTGGTTATGG+TGG + chr4_1:45564473-45564492 Msa0550150:CDS 60.0%
AGGGACCGTGGTTATGGTGG+TGG + chr4_1:45564476-45564495 Msa0550150:CDS 60.0%
TCCCGCTATTCTTCACGCGG+TGG + chr4_1:45564512-45564531 Msa0550150:CDS 60.0%
TCTTCACGCGGTGGAGATGG+TGG + chr4_1:45564521-45564540 Msa0550150:CDS 60.0%
!! GTGGAGATGGTGGAGGAAGC+TGG + chr4_1:45564531-45564550 Msa0550150:CDS 60.0%
! GAGTACCGTTGCTTCGTCGG+AGG + chr4_1:45563761-45563780 Msa0550150:CDS 60.0%
GCTTCGTCGGAGGTCTTGCA+TGG + chr4_1:45563771-45563790 Msa0550150:CDS 60.0%
CTCGAGAGCTTCGCTATCGG+TGG - chr4_1:45563798-45563817 None:intergenic 60.0%
GTGAATGAGGCTCAGAGCCG+TGG + chr4_1:45564302-45564321 Msa0550150:CDS 60.0%
CACCATATCCACCGCCACCA+CGG - chr4_1:45564346-45564365 None:intergenic 60.0%
! GGTGGATATGGTGGAGGTGG+TGG + chr4_1:45564353-45564372 Msa0550150:CDS 60.0%
! GGATATGGTGGAGGTGGTGG+TGG + chr4_1:45564356-45564375 Msa0550150:CDS 60.0%
!! GGTGGAGGTGGTGGTGGATA+TGG + chr4_1:45564362-45564381 Msa0550150:CDS 60.0%
!! GGAGGTGGTGGTGGATATGG+CGG + chr4_1:45564365-45564384 Msa0550150:CDS 60.0%
!! AGCAGAAGCAGTGGTGGTGG+AGG + chr4_1:45564413-45564432 Msa0550150:CDS 60.0%
!! AGAAGCAGTGGTGGTGGAGG+TGG + chr4_1:45564416-45564435 Msa0550150:CDS 60.0%
!! GGTGGTGGAGGTGGTTATGG+AGG + chr4_1:45564425-45564444 Msa0550150:CDS 60.0%
GGTGGAGGTGGTTATGGAGG+AGG + chr4_1:45564428-45564447 Msa0550150:CDS 60.0%
GGAGGTGGTTATGGAGGAGG+TGG + chr4_1:45564431-45564450 Msa0550150:CDS 60.0%
GGTGGTTATGGAGGAGGTGG+TGG + chr4_1:45564434-45564453 Msa0550150:CDS 60.0%
! GGTTATGGAGGAGGTGGTGG+TGG + chr4_1:45564437-45564456 Msa0550150:CDS 60.0%
!! TATGGAGGAGGTGGTGGTGG+TGG + chr4_1:45564440-45564459 Msa0550150:CDS 60.0%
!! GGAGGTGGTGGTGGTGGTTA+TGG + chr4_1:45564446-45564465 Msa0550150:CDS 60.0%
!! GGTGGTGGTGGTGGTTATGG+TGG + chr4_1:45564449-45564468 Msa0550150:CDS 60.0%
!! GGTGGTGGTGGTTATGGTGG+TGG + chr4_1:45564452-45564471 Msa0550150:CDS 60.0%
!! TATGGTGGTGGTAGGGACCG+TGG + chr4_1:45564464-45564483 Msa0550150:CDS 60.0%
GGTGGTAGGGACCGTGGTTA+TGG + chr4_1:45564470-45564489 Msa0550150:CDS 60.0%
GGTAGGGACCGTGGTTATGG+TGG + chr4_1:45564473-45564492 Msa0550150:CDS 60.0%
AGGGACCGTGGTTATGGTGG+TGG + chr4_1:45564476-45564495 Msa0550150:CDS 60.0%
TCCCGCTATTCTTCACGCGG+TGG + chr4_1:45564512-45564531 Msa0550150:CDS 60.0%
TCTTCACGCGGTGGAGATGG+TGG + chr4_1:45564521-45564540 Msa0550150:CDS 60.0%
!! GTGGAGATGGTGGAGGAAGC+TGG + chr4_1:45564531-45564550 Msa0550150:CDS 60.0%
GAGGCTCAGAGCCGTGGTAG+CGG + chr4_1:45564308-45564327 Msa0550150:CDS 65.0%
CTCCTCCACCACCGCTACCA+CGG - chr4_1:45564322-45564341 None:intergenic 65.0%
!! CGTGGTGGCGGTGGATATGG+TGG + chr4_1:45564344-45564363 Msa0550150:CDS 65.0%
! GGTGGCGGTGGATATGGTGG+AGG + chr4_1:45564347-45564366 Msa0550150:CDS 65.0%
! GGCGGTGGATATGGTGGAGG+TGG + chr4_1:45564350-45564369 Msa0550150:CDS 65.0%
!! GGTGGTGGTGGATATGGCGG+AGG + chr4_1:45564368-45564387 Msa0550150:CDS 65.0%
!! GGTGGTGGATATGGCGGAGG+TGG + chr4_1:45564371-45564390 Msa0550150:CDS 65.0%
! TCACGCGGTGGAGATGGTGG+AGG + chr4_1:45564524-45564543 Msa0550150:CDS 65.0%
GAGGCTCAGAGCCGTGGTAG+CGG + chr4_1:45564308-45564327 Msa0550150:CDS 65.0%
CTCCTCCACCACCGCTACCA+CGG - chr4_1:45564322-45564341 None:intergenic 65.0%
!! CGTGGTGGCGGTGGATATGG+TGG + chr4_1:45564344-45564363 Msa0550150:CDS 65.0%
! GGTGGCGGTGGATATGGTGG+AGG + chr4_1:45564347-45564366 Msa0550150:CDS 65.0%
! GGCGGTGGATATGGTGGAGG+TGG + chr4_1:45564350-45564369 Msa0550150:CDS 65.0%
!! GGTGGTGGTGGATATGGCGG+AGG + chr4_1:45564368-45564387 Msa0550150:CDS 65.0%
!! GGTGGTGGATATGGCGGAGG+TGG + chr4_1:45564371-45564390 Msa0550150:CDS 65.0%
! TCACGCGGTGGAGATGGTGG+AGG + chr4_1:45564524-45564543 Msa0550150:CDS 65.0%
!! GCTCAGAGCCGTGGTAGCGG+TGG + chr4_1:45564311-45564330 Msa0550150:CDS 70.0%
!! CAGAGCCGTGGTAGCGGTGG+TGG + chr4_1:45564314-45564333 Msa0550150:CDS 70.0%
!! AGCCGTGGTAGCGGTGGTGG+AGG + chr4_1:45564317-45564336 Msa0550150:CDS 70.0%
!! CGTGGTAGCGGTGGTGGAGG+AGG + chr4_1:45564320-45564339 Msa0550150:CDS 70.0%
!! GGCCGTGGTGGCGGTGGATA+TGG + chr4_1:45564341-45564360 Msa0550150:CDS 70.0%
!! GCTCAGAGCCGTGGTAGCGG+TGG + chr4_1:45564311-45564330 Msa0550150:CDS 70.0%
!! CAGAGCCGTGGTAGCGGTGG+TGG + chr4_1:45564314-45564333 Msa0550150:CDS 70.0%
!! AGCCGTGGTAGCGGTGGTGG+AGG + chr4_1:45564317-45564336 Msa0550150:CDS 70.0%
!! CGTGGTAGCGGTGGTGGAGG+AGG + chr4_1:45564320-45564339 Msa0550150:CDS 70.0%
!! GGCCGTGGTGGCGGTGGATA+TGG + chr4_1:45564341-45564360 Msa0550150:CDS 70.0%
!! AGCGGTGGTGGAGGAGGCCG+TGG + chr4_1:45564326-45564345 Msa0550150:CDS 75.0%
!! GGTGGTGGAGGAGGCCGTGG+TGG + chr4_1:45564329-45564348 Msa0550150:CDS 75.0%
GGTGGAGGAGGCCGTGGTGG+CGG + chr4_1:45564332-45564351 Msa0550150:CDS 75.0%
!! AGCGGTGGTGGAGGAGGCCG+TGG + chr4_1:45564326-45564345 Msa0550150:CDS 75.0%
!! GGTGGTGGAGGAGGCCGTGG+TGG + chr4_1:45564329-45564348 Msa0550150:CDS 75.0%
GGTGGAGGAGGCCGTGGTGG+CGG + chr4_1:45564332-45564351 Msa0550150:CDS 75.0%
!!! GGAGGAGGCCGTGGTGGCGG+TGG + chr4_1:45564335-45564354 Msa0550150:CDS 80.0%
! TGGCGGAGGTGGTCGCCGCG+AGG + chr4_1:45564382-45564401 Msa0550150:CDS 80.0%
! GGCGGAGGTGGTCGCCGCGA+GGG + chr4_1:45564383-45564402 Msa0550150:CDS 80.0%
! GGAGGTGGTCGCCGCGAGGG+TGG + chr4_1:45564386-45564405 Msa0550150:CDS 80.0%
!!! GGAGGAGGCCGTGGTGGCGG+TGG + chr4_1:45564335-45564354 Msa0550150:CDS 80.0%
! TGGCGGAGGTGGTCGCCGCG+AGG + chr4_1:45564382-45564401 Msa0550150:CDS 80.0%
! GGCGGAGGTGGTCGCCGCGA+GGG + chr4_1:45564383-45564402 Msa0550150:CDS 80.0%
! GGAGGTGGTCGCCGCGAGGG+TGG + chr4_1:45564386-45564405 Msa0550150:CDS 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 45563673 45564562 45563673 ID=Msa0550150;Name=Msa0550150
chr4_1 mRNA 45563673 45564562 45563673 ID=Msa0550150-mRNA-1;Parent=Msa0550150;Name=Msa0550150-mRNA-1;_AED=0.15;_eAED=0.15;_QI=70|1|0.5|1|1|1|2|0|166
chr4_1 exon 45563673 45563856 45563673 ID=Msa0550150-mRNA-1:exon:12013;Parent=Msa0550150-mRNA-1
chr4_1 exon 45564176 45564562 45564176 ID=Msa0550150-mRNA-1:exon:12014;Parent=Msa0550150-mRNA-1
chr4_1 five_prime_UTR 45563673 45563742 45563673 ID=Msa0550150-mRNA-1:five_prime_utr;Parent=Msa0550150-mRNA-1
chr4_1 CDS 45563743 45563856 45563743 ID=Msa0550150-mRNA-1:cds;Parent=Msa0550150-mRNA-1
chr4_1 CDS 45564176 45564562 45564176 ID=Msa0550150-mRNA-1:cds;Parent=Msa0550150-mRNA-1
Gene Sequence

>Msa0550150

ATGGCTTCTGCAGATGTTGAGTACCGTTGCTTCGTCGGAGGTCTTGCATGGGCCACCGATAGCGAAGCTCTCGAGAAAGCCTTCTCTCAATACGGAGAAATCATCGATTCGAAGATTATCAACGATCGTGAAACTGGAAGATCAAGAGGATTTGGATTTGTGACATTTGCTGATGAGAAATCGATGAGAGATGCGATTGAAGGGATGAACGGTTCAGATATGGATGGAAGGAACATTACTGTGAATGAGGCTCAGAGCCGTGGTAGCGGTGGTGGAGGAGGCCGTGGTGGCGGTGGATATGGTGGAGGTGGTGGTGGATATGGCGGAGGTGGTCGCCGCGAGGGTGGTTACAGCAGAAGCAGTGGTGGTGGAGGTGGTTATGGAGGAGGTGGTGGTGGTGGTTATGGTGGTGGTAGGGACCGTGGTTATGGTGGTGGAGATGATGGTGGTTCCCGCTATTCTTCACGCGGTGGAGATGGTGGAGGAAGCTGGAGAAGTTAG
Protein sequence

>Msa0550150

MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIEGMNGSDMDGRNITVNEAQSRGSGGGGGRGGGGYGGGGGGYGGGGRREGGYSRSSGGGGGYGGGGGGGYGGGRDRGYGGGDDGGSRYSSRGGDGGGSWRS*