Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495300 | XP_013466887.2 | 97.669 | 429 | 10 | 0 | 10 | 438 | 1 | 429 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495300 | sp|O04496|AED3_ARATH | 51.799 | 417 | 185 | 8 | 35 | 437 | 34 | 448 | 1.85e-139 | 409 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495300 | A0A396JQ13 | 97.669 | 429 | 10 | 0 | 10 | 438 | 1 | 429 | 0.0 | 855 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002420 | Msa0495300 | 0.806318 | 8.717698e-50 | -8.615850e-47 |
| Msa0022260 | Msa0495300 | 0.815923 | 7.208241e-52 | -8.615850e-47 |
| Msa0025160 | Msa0495300 | 0.814351 | 1.610370e-51 | -8.615850e-47 |
| Msa0029380 | Msa0495300 | 0.815000 | 1.156948e-51 | -8.615850e-47 |
| Msa0039790 | Msa0495300 | 0.802958 | 4.382122e-49 | -8.615850e-47 |
| Msa0040790 | Msa0495300 | 0.836953 | 6.916911e-57 | -8.615850e-47 |
| Msa0048510 | Msa0495300 | 0.811561 | 6.581733e-51 | -8.615850e-47 |
| Msa0050790 | Msa0495300 | 0.800805 | 1.213177e-48 | -8.615850e-47 |
| Msa0072520 | Msa0495300 | 0.800399 | 1.467700e-48 | -8.615850e-47 |
| Msa0077340 | Msa0495300 | 0.819844 | 9.380183e-53 | -8.615850e-47 |
| Msa0077560 | Msa0495300 | 0.832934 | 7.121491e-56 | -8.615850e-47 |
| Msa0078500 | Msa0495300 | 0.819240 | 1.288216e-52 | -8.615850e-47 |
| Msa0118270 | Msa0495300 | 0.810613 | 1.056625e-50 | -8.615850e-47 |
| Msa0123070 | Msa0495300 | 0.819272 | 1.267132e-52 | -8.615850e-47 |
| Msa0124910 | Msa0495300 | 0.821913 | 3.135436e-53 | -8.615850e-47 |
| Msa0126210 | Msa0495300 | 0.836319 | 1.003358e-56 | -8.615850e-47 |
| Msa0140280 | Msa0495300 | 0.821534 | 3.836855e-53 | -8.615850e-47 |
| Msa0161400 | Msa0495300 | 0.812168 | 4.855146e-51 | -8.615850e-47 |
| Msa0168480 | Msa0495300 | 0.832809 | 7.648618e-56 | -8.615850e-47 |
| Msa0184500 | Msa0495300 | 0.814700 | 1.348320e-51 | -8.615850e-47 |
| Msa0190730 | Msa0495300 | 0.815312 | 9.862606e-52 | -8.615850e-47 |
| Msa0213610 | Msa0495300 | 0.819863 | 9.288312e-53 | -8.615850e-47 |
| Msa0222560 | Msa0495300 | 0.821746 | 3.426386e-53 | -8.615850e-47 |
| Msa0369790 | Msa0495300 | 0.822410 | 2.405040e-53 | -8.615850e-47 |
| Msa0375640 | Msa0495300 | 0.835455 | 1.661324e-56 | -8.615850e-47 |
| Msa0377710 | Msa0495300 | 0.814489 | 1.501389e-51 | -8.615850e-47 |
| Msa0380670 | Msa0495300 | 0.807038 | 6.143956e-50 | -8.615850e-47 |
| Msa0390970 | Msa0495300 | 0.811036 | 8.559872e-51 | -8.615850e-47 |
| Msa0401970 | Msa0495300 | 0.801701 | 7.951046e-49 | -8.615850e-47 |
| Msa0424160 | Msa0495300 | 0.844049 | 9.614506e-59 | -8.615850e-47 |
| Msa0430300 | Msa0495300 | 0.800810 | 1.210012e-48 | -8.615850e-47 |
| Msa0432010 | Msa0495300 | 0.810468 | 1.135802e-50 | -8.615850e-47 |
| Msa0435570 | Msa0495300 | 0.810996 | 8.728329e-51 | -8.615850e-47 |
| Msa0440350 | Msa0495300 | 0.822599 | 2.172856e-53 | -8.615850e-47 |
| Msa0443570 | Msa0495300 | 0.855348 | 6.699722e-62 | -8.615850e-47 |
| Msa0464000 | Msa0495300 | 0.818602 | 1.798959e-52 | -8.615850e-47 |
| Msa0481890 | Msa0495300 | 0.827119 | 1.865218e-54 | -8.615850e-47 |
| Msa0242590 | Msa0495300 | 0.805067 | 1.596641e-49 | -8.615850e-47 |
| Msa0269210 | Msa0495300 | 0.812952 | 3.271559e-51 | -8.615850e-47 |
| Msa0293040 | Msa0495300 | 0.812585 | 3.936879e-51 | -8.615850e-47 |
| Msa0298500 | Msa0495300 | 0.802623 | 5.137305e-49 | -8.615850e-47 |
| Msa0301820 | Msa0495300 | 0.826931 | 2.068766e-54 | -8.615850e-47 |
| Msa0307270 | Msa0495300 | 0.843269 | 1.554226e-58 | -8.615850e-47 |
| Msa0349550 | Msa0495300 | 0.828330 | 9.545700e-55 | -8.615850e-47 |
| Msa0361910 | Msa0495300 | 0.813890 | 2.035027e-51 | -8.615850e-47 |
| Msa0484570 | Msa0495300 | 0.818867 | 1.566847e-52 | -8.615850e-47 |
| Msa0495300 | Msa0509550 | 0.829560 | 4.806796e-55 | -8.615850e-47 |
| Msa0495300 | Msa0515800 | 0.832715 | 8.071898e-56 | -8.615850e-47 |
| Msa0495300 | Msa0519760 | 0.820043 | 8.450267e-53 | -8.615850e-47 |
| Msa0495300 | Msa0519810 | 0.826562 | 2.534397e-54 | -8.615850e-47 |
| Msa0495300 | Msa0519840 | 0.823802 | 1.138410e-53 | -8.615850e-47 |
| Msa0495300 | Msa0529030 | 0.821651 | 3.605876e-53 | -8.615850e-47 |
| Msa0495300 | Msa0553750 | 0.825609 | 4.269895e-54 | -8.615850e-47 |
| Msa0495300 | Msa0567170 | 0.833658 | 4.698481e-56 | -8.615850e-47 |
| Msa0495300 | Msa0580370 | 0.813641 | 2.308965e-51 | -8.615850e-47 |
| Msa0495300 | Msa0606100 | 0.800699 | 1.275085e-48 | -8.615850e-47 |
| Msa0495300 | Msa0607800 | 0.836589 | 8.564988e-57 | -8.615850e-47 |
| Msa0495300 | Msa0648040 | 0.830617 | 2.655532e-55 | -8.615850e-47 |
| Msa0495300 | Msa0652770 | 0.802573 | 5.262248e-49 | -8.615850e-47 |
| Msa0495300 | Msa0658640 | 0.837530 | 4.922303e-57 | -8.615850e-47 |
| Msa0495300 | Msa0690740 | 0.822243 | 2.628837e-53 | -8.615850e-47 |
| Msa0495300 | Msa0692790 | 0.832118 | 1.134147e-55 | -8.615850e-47 |
| Msa0495300 | Msa0703600 | 0.844142 | 9.079009e-59 | -8.615850e-47 |
| Msa0495300 | Msa0709200 | 0.843079 | 1.747086e-58 | -8.615850e-47 |
| Msa0495300 | Msa0709440 | 0.829016 | 6.516245e-55 | -8.615850e-47 |
| Msa0495300 | Msa0735780 | 0.832884 | 7.327487e-56 | -8.615850e-47 |
| Msa0495300 | Msa0743440 | 0.804597 | 2.001649e-49 | -8.615850e-47 |
| Msa0495300 | Msa0754430 | 0.801291 | 9.649855e-49 | -8.615850e-47 |
| Msa0495300 | Msa0773630 | 0.828207 | 1.021867e-54 | -8.615850e-47 |
| Msa0495300 | Msa0778550 | 0.834007 | 3.843477e-56 | -8.615850e-47 |
| Msa0495300 | Msa0780910 | 0.826605 | 2.475613e-54 | -8.615850e-47 |
| Msa0495300 | Msa0787590 | 0.801392 | 9.203560e-49 | -8.615850e-47 |
| Msa0495300 | Msa0795870 | 0.820892 | 5.395830e-53 | -8.615850e-47 |
| Msa0495300 | Msa0818880 | 0.832052 | 1.177732e-55 | -8.615850e-47 |
| Msa0495300 | Msa0821160 | 0.808714 | 2.704169e-50 | -8.615850e-47 |
| Msa0495300 | Msa0824450 | 0.813263 | 2.796232e-51 | -8.615850e-47 |
| Msa0495300 | Msa0833650 | 0.812135 | 4.937636e-51 | -8.615850e-47 |
| Msa0495300 | Msa0878280 | 0.818244 | 2.169006e-52 | -8.615850e-47 |
| Msa0495300 | Msa0944010 | 0.815391 | 9.471884e-52 | -8.615850e-47 |
| Msa0495300 | Msa0945190 | 0.802424 | 5.647082e-49 | -8.615850e-47 |
| Msa0495300 | Msa0966480 | 0.807157 | 5.798790e-50 | -8.615850e-47 |
| Msa0495300 | Msa0980290 | 0.830312 | 3.152284e-55 | -8.615850e-47 |
| Msa0495300 | Msa0981320 | 0.824093 | 9.727919e-54 | -8.615850e-47 |
| Msa0495300 | Msa1035610 | 0.817122 | 3.883673e-52 | -8.615850e-47 |
| Msa0495300 | Msa1042160 | 0.842937 | 1.906093e-58 | -8.615850e-47 |
| Msa0495300 | Msa1042190 | 0.843195 | 1.626708e-58 | -8.615850e-47 |
| Msa0495300 | Msa1042880 | 0.834665 | 2.627749e-56 | -8.615850e-47 |
| Msa0495300 | Msa1072940 | 0.842766 | 2.115423e-58 | -8.615850e-47 |
| Msa0495300 | Msa1072960 | 0.802122 | 6.517607e-49 | -8.615850e-47 |
| Msa0495300 | Msa1077990 | 0.806297 | 8.808788e-50 | -8.615850e-47 |
| Msa0495300 | Msa1080000 | 0.807803 | 4.228906e-50 | -8.615850e-47 |
| Msa0495300 | Msa1084530 | 0.828271 | 9.862621e-55 | -8.615850e-47 |
| Msa0495300 | Msa1104110 | 0.824954 | 6.101003e-54 | -8.615850e-47 |
| Msa0495300 | Msa1123210 | 0.811648 | 6.302578e-51 | -8.615850e-47 |
| Msa0495300 | Msa1125820 | 0.831008 | 2.129550e-55 | -8.615850e-47 |
| Msa0495300 | Msa1125990 | 0.833579 | 4.917845e-56 | -8.615850e-47 |
| Msa0495300 | Msa1132530 | 0.852840 | 3.544238e-61 | -8.615850e-47 |
| Msa0495300 | Msa1132840 | 0.811420 | 7.065006e-51 | -8.615850e-47 |
| Msa0495300 | Msa1147700 | 0.809037 | 2.306634e-50 | -8.615850e-47 |
| Msa0495300 | Msa1147910 | 0.825469 | 4.607864e-54 | -8.615850e-47 |
| Msa0495300 | Msa1160920 | 0.835132 | 2.005078e-56 | -8.615850e-47 |
| Msa0495300 | Msa1167470 | 0.846157 | 2.590151e-59 | -8.615850e-47 |
| Msa0495300 | Msa1171290 | 0.824303 | 8.681778e-54 | -8.615850e-47 |
| Msa0495300 | Msa1201540 | 0.800509 | 1.394121e-48 | -8.615850e-47 |
| Msa0495300 | Msa1215680 | 0.831719 | 1.423435e-55 | -8.615850e-47 |
| Msa0495300 | Msa1215870 | 0.823636 | 1.244728e-53 | -8.615850e-47 |
| Msa0495300 | Msa1217210 | 0.830169 | 3.415982e-55 | -8.615850e-47 |
| Msa0495300 | Msa1218820 | 0.803489 | 3.402449e-49 | -8.615850e-47 |
| Msa0495300 | Msa1226520 | 0.835690 | 1.448837e-56 | -8.615850e-47 |
| Msa0495300 | Msa1244240 | 0.800585 | 1.344844e-48 | -8.615850e-47 |
| Msa0495300 | Msa1254540 | 0.811139 | 8.130892e-51 | -8.615850e-47 |
| Msa0495300 | Msa1257440 | 0.805164 | 1.523528e-49 | -8.615850e-47 |
| Msa0495300 | Msa1262590 | 0.846940 | 1.583589e-59 | -8.615850e-47 |
| Msa0495300 | Msa1263780 | 0.821743 | 3.432700e-53 | -8.615850e-47 |
| Msa0495300 | Msa1305250 | 0.804099 | 2.541389e-49 | -8.615850e-47 |
| Msa0495300 | Msa1306570 | 0.861384 | 1.065885e-63 | -8.615850e-47 |
| Msa0495300 | Msa1307630 | 0.804059 | 2.590779e-49 | -8.615850e-47 |
| Msa0495300 | Msa1318170 | 0.805041 | 1.616134e-49 | -8.615850e-47 |
| Msa0495300 | Msa1332360 | 0.833685 | 4.627996e-56 | -8.615850e-47 |
| Msa0495300 | Msa1333820 | 0.825650 | 4.175179e-54 | -8.615850e-47 |
| Msa0495300 | Msa1359690 | 0.809049 | 2.292685e-50 | -8.615850e-47 |
| Msa0495300 | Msa1366150 | 0.804139 | 2.493379e-49 | -8.615850e-47 |
| Msa0495300 | Msa1368750 | 0.811775 | 5.915015e-51 | -8.615850e-47 |
| Msa0495300 | Msa1374790 | 0.811826 | 5.763682e-51 | -8.615850e-47 |
| Msa0495300 | Msa1375350 | 0.855853 | 4.772165e-62 | -8.615850e-47 |
| Msa0495300 | Msa1384150 | 0.801502 | 8.737793e-49 | -8.615850e-47 |
| Msa0495300 | Msa1387440 | 0.808562 | 2.914557e-50 | -8.615850e-47 |
| Msa0495300 | Msa1405460 | 0.821800 | 3.329469e-53 | -8.615850e-47 |
| Msa0495300 | Msa1407840 | 0.801586 | 8.396211e-49 | -8.615850e-47 |
| Msa0495300 | Msa1427110 | 0.813115 | 3.013772e-51 | -8.615850e-47 |
| Msa0495300 | Msa1437810 | 0.802660 | 5.049346e-49 | -8.615850e-47 |
| Msa0495300 | Msa1440630 | 0.800768 | 1.234414e-48 | -8.615850e-47 |
| Msa0495300 | Msa1445120 | 0.803994 | 2.673093e-49 | -8.615850e-47 |
| Msa0495300 | Msa1451820 | 0.815236 | 1.025116e-51 | -8.615850e-47 |
| Msa0495300 | Msa1454500 | 0.803873 | 2.832216e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495300 | MtrunA17_Chr1g0164401 | 97.669 | 429 | 10 | 0 | 10 | 438 | 1 | 429 | 0.0 | 855 |
| Msa0495300 | MtrunA17_Chr8g0353261 | 81.542 | 428 | 78 | 1 | 12 | 438 | 7 | 434 | 0.0 | 699 |
| Msa0495300 | MtrunA17_Chr3g0082281 | 96.763 | 278 | 9 | 0 | 161 | 438 | 43 | 320 | 0.0 | 548 |
| Msa0495300 | MtrunA17_Chr3g0133071 | 53.636 | 440 | 187 | 9 | 10 | 437 | 3 | 437 | 8.60e-143 | 415 |
| Msa0495300 | MtrunA17_Chr3g0082301 | 98.958 | 96 | 1 | 0 | 67 | 162 | 1 | 96 | 4.43e-63 | 199 |
| Msa0495300 | MtrunA17_Chr3g0130931 | 30.501 | 459 | 265 | 15 | 3 | 430 | 6 | 441 | 2.88e-54 | 187 |
| Msa0495300 | MtrunA17_Chr1g0212321 | 34.857 | 350 | 210 | 8 | 99 | 437 | 144 | 486 | 9.52e-54 | 186 |
| Msa0495300 | MtrunA17_Chr7g0275731 | 35.143 | 350 | 212 | 6 | 99 | 437 | 139 | 484 | 1.01e-50 | 178 |
| Msa0495300 | MtrunA17_Chr3g0099891 | 29.157 | 415 | 263 | 12 | 38 | 437 | 56 | 454 | 3.42e-48 | 171 |
| Msa0495300 | MtrunA17_Chr1g0210201 | 32.041 | 387 | 229 | 10 | 70 | 437 | 96 | 467 | 2.69e-46 | 166 |
| Msa0495300 | MtrunA17_Chr4g0001991 | 32.361 | 377 | 211 | 14 | 88 | 438 | 160 | 518 | 5.78e-46 | 166 |
| Msa0495300 | MtrunA17_Chr1g0165201 | 33.811 | 349 | 216 | 7 | 99 | 437 | 126 | 469 | 2.53e-45 | 163 |
| Msa0495300 | MtrunA17_Chr2g0291201 | 31.478 | 467 | 256 | 20 | 17 | 437 | 3 | 451 | 4.76e-45 | 162 |
| Msa0495300 | MtrunA17_Chr6g0484901 | 34.393 | 346 | 206 | 10 | 102 | 437 | 157 | 491 | 1.22e-42 | 156 |
| Msa0495300 | MtrunA17_Chr3g0095891 | 33.422 | 374 | 204 | 11 | 99 | 437 | 95 | 458 | 1.30e-42 | 156 |
| Msa0495300 | MtrunA17_Chr8g0390761 | 29.107 | 347 | 227 | 9 | 102 | 437 | 117 | 455 | 2.91e-41 | 152 |
| Msa0495300 | MtrunA17_Chr3g0099901 | 32.065 | 368 | 220 | 13 | 88 | 437 | 130 | 485 | 1.02e-38 | 145 |
| Msa0495300 | MtrunA17_Chr5g0442921 | 32.162 | 370 | 215 | 13 | 99 | 437 | 189 | 553 | 3.55e-38 | 145 |
| Msa0495300 | MtrunA17_Chr5g0415951 | 29.425 | 452 | 279 | 17 | 10 | 438 | 1 | 435 | 8.36e-38 | 142 |
| Msa0495300 | MtrunA17_Chr6g0457401 | 29.630 | 432 | 264 | 16 | 32 | 438 | 21 | 437 | 3.11e-37 | 140 |
| Msa0495300 | MtrunA17_Chr2g0310831 | 28.337 | 427 | 267 | 15 | 37 | 438 | 29 | 441 | 4.58e-37 | 140 |
| Msa0495300 | MtrunA17_Chr3g0110191 | 29.558 | 362 | 219 | 15 | 103 | 438 | 88 | 439 | 1.43e-36 | 139 |
| Msa0495300 | MtrunA17_Chr4g0056211 | 30.175 | 401 | 210 | 15 | 102 | 437 | 75 | 470 | 3.72e-35 | 135 |
| Msa0495300 | MtrunA17_Chr3g0087851 | 27.356 | 435 | 270 | 17 | 32 | 438 | 21 | 437 | 6.17e-35 | 134 |
| Msa0495300 | MtrunA17_Chr2g0310821 | 27.765 | 443 | 281 | 16 | 15 | 438 | 21 | 443 | 8.65e-35 | 134 |
| Msa0495300 | MtrunA17_Chr7g0239001 | 29.189 | 370 | 220 | 14 | 104 | 437 | 62 | 425 | 1.35e-34 | 133 |
| Msa0495300 | MtrunA17_Chr5g0435871 | 26.872 | 454 | 287 | 16 | 6 | 438 | 6 | 435 | 4.19e-34 | 132 |
| Msa0495300 | MtrunA17_Chr5g0435971 | 27.123 | 424 | 271 | 15 | 36 | 438 | 26 | 432 | 5.23e-33 | 129 |
| Msa0495300 | MtrunA17_Chr5g0434411 | 28.997 | 369 | 216 | 16 | 103 | 438 | 83 | 438 | 7.65e-33 | 129 |
| Msa0495300 | MtrunA17_Chr8g0386441 | 26.244 | 442 | 291 | 15 | 14 | 438 | 7 | 430 | 7.72e-33 | 129 |
| Msa0495300 | MtrunA17_Chr7g0267171 | 29.091 | 385 | 214 | 14 | 102 | 437 | 91 | 465 | 3.05e-32 | 127 |
| Msa0495300 | MtrunA17_Chr5g0399171 | 28.087 | 413 | 224 | 15 | 88 | 437 | 67 | 469 | 1.09e-31 | 126 |
| Msa0495300 | MtrunA17_Chr2g0310801 | 27.556 | 450 | 282 | 16 | 15 | 438 | 3 | 434 | 2.82e-31 | 124 |
| Msa0495300 | MtrunA17_Chr8g0352671 | 27.152 | 453 | 277 | 19 | 14 | 438 | 10 | 437 | 4.22e-31 | 124 |
| Msa0495300 | MtrunA17_Chr3g0112051 | 28.415 | 366 | 204 | 15 | 101 | 437 | 73 | 409 | 7.79e-30 | 120 |
| Msa0495300 | MtrunA17_Chr5g0395911 | 31.081 | 370 | 221 | 16 | 94 | 438 | 54 | 414 | 1.13e-29 | 119 |
| Msa0495300 | MtrunA17_Chr8g0352661 | 27.152 | 453 | 285 | 18 | 13 | 438 | 3 | 437 | 1.50e-29 | 119 |
| Msa0495300 | MtrunA17_Chr2g0307991 | 28.686 | 373 | 219 | 17 | 97 | 438 | 49 | 405 | 3.65e-29 | 118 |
| Msa0495300 | MtrunA17_Chr2g0308001 | 28.177 | 362 | 234 | 14 | 97 | 438 | 54 | 409 | 1.13e-28 | 117 |
| Msa0495300 | MtrunA17_Chr5g0395931 | 28.678 | 401 | 225 | 16 | 77 | 438 | 58 | 436 | 9.39e-27 | 111 |
| Msa0495300 | MtrunA17_Chr5g0419291 | 26.684 | 386 | 247 | 16 | 36 | 400 | 26 | 396 | 4.31e-26 | 109 |
| Msa0495300 | MtrunA17_Chr6g0487471 | 27.333 | 450 | 283 | 19 | 12 | 438 | 7 | 435 | 9.59e-26 | 108 |
| Msa0495300 | MtrunA17_Chr5g0434441 | 29.810 | 369 | 215 | 17 | 103 | 438 | 70 | 427 | 1.22e-25 | 108 |
| Msa0495300 | MtrunA17_Chr2g0333991 | 28.367 | 349 | 207 | 17 | 102 | 424 | 89 | 420 | 3.56e-25 | 107 |
| Msa0495300 | MtrunA17_Chr2g0311451 | 25.442 | 452 | 288 | 20 | 14 | 438 | 7 | 436 | 4.30e-25 | 107 |
| Msa0495300 | MtrunA17_Chr4g0027681 | 25.728 | 412 | 252 | 19 | 66 | 438 | 41 | 437 | 1.13e-24 | 106 |
| Msa0495300 | MtrunA17_Chr2g0320621 | 25.666 | 413 | 251 | 18 | 66 | 438 | 42 | 438 | 1.43e-24 | 105 |
| Msa0495300 | MtrunA17_Chr2g0309561 | 25.519 | 482 | 257 | 22 | 39 | 437 | 46 | 508 | 2.08e-24 | 105 |
| Msa0495300 | MtrunA17_Chr5g0401601 | 26.016 | 369 | 223 | 19 | 102 | 438 | 89 | 439 | 2.17e-24 | 106 |
| Msa0495300 | MtrunA17_Chr2g0312941 | 28.418 | 373 | 215 | 13 | 99 | 430 | 85 | 446 | 2.26e-24 | 105 |
| Msa0495300 | MtrunA17_Chr5g0406001 | 29.144 | 374 | 202 | 17 | 102 | 437 | 113 | 461 | 1.07e-23 | 103 |
| Msa0495300 | MtrunA17_Chr6g0486981 | 25.111 | 450 | 277 | 20 | 20 | 438 | 17 | 437 | 2.52e-23 | 101 |
| Msa0495300 | MtrunA17_Chr4g0023351 | 32.218 | 239 | 139 | 10 | 77 | 293 | 29 | 266 | 2.15e-22 | 96.7 |
| Msa0495300 | MtrunA17_Chr7g0265331 | 25.594 | 379 | 221 | 19 | 102 | 438 | 82 | 441 | 1.52e-21 | 97.1 |
| Msa0495300 | MtrunA17_Chr1g0179751 | 24.249 | 433 | 266 | 19 | 51 | 438 | 55 | 470 | 2.23e-21 | 96.7 |
| Msa0495300 | MtrunA17_Chr2g0307461 | 28.650 | 363 | 211 | 17 | 102 | 428 | 71 | 421 | 2.30e-21 | 95.9 |
| Msa0495300 | MtrunA17_Chr4g0053721 | 25.410 | 366 | 227 | 19 | 102 | 437 | 81 | 430 | 4.02e-21 | 96.3 |
| Msa0495300 | MtrunA17_Chr1g0179091 | 27.874 | 348 | 208 | 15 | 102 | 438 | 52 | 367 | 8.79e-21 | 93.6 |
| Msa0495300 | MtrunA17_Chr1g0189381 | 25.737 | 373 | 229 | 18 | 102 | 438 | 70 | 430 | 1.17e-20 | 94.0 |
| Msa0495300 | MtrunA17_Chr7g0249451 | 26.273 | 373 | 226 | 18 | 102 | 438 | 72 | 431 | 3.48e-20 | 92.8 |
| Msa0495300 | MtrunA17_Chr7g0221681 | 26.385 | 379 | 220 | 18 | 102 | 438 | 73 | 434 | 5.24e-20 | 92.0 |
| Msa0495300 | MtrunA17_Chr5g0395871 | 26.437 | 435 | 259 | 20 | 32 | 438 | 24 | 425 | 3.40e-19 | 89.4 |
| Msa0495300 | MtrunA17_Chr5g0425141 | 26.039 | 361 | 217 | 12 | 108 | 437 | 108 | 449 | 3.52e-18 | 86.7 |
| Msa0495300 | MtrunA17_Chr4g0061641 | 28.075 | 374 | 235 | 15 | 84 | 438 | 39 | 397 | 9.94e-18 | 84.7 |
| Msa0495300 | MtrunA17_Chr3g0124421 | 26.287 | 369 | 209 | 17 | 108 | 437 | 106 | 450 | 1.93e-17 | 84.7 |
| Msa0495300 | MtrunA17_Chr8g0352691 | 30.328 | 244 | 140 | 9 | 187 | 418 | 15 | 240 | 2.10e-16 | 79.0 |
| Msa0495300 | MtrunA17_Chr1g0159791 | 26.685 | 371 | 218 | 17 | 102 | 437 | 58 | 409 | 3.55e-16 | 80.1 |
| Msa0495300 | MtrunA17_Chr4g0010951 | 29.278 | 263 | 139 | 13 | 102 | 336 | 62 | 305 | 2.20e-15 | 77.8 |
| Msa0495300 | MtrunA17_Chr3g0078321 | 24.138 | 377 | 224 | 17 | 102 | 438 | 59 | 413 | 3.20e-15 | 77.4 |
| Msa0495300 | MtrunA17_Chr3g0130741 | 25.600 | 375 | 217 | 18 | 102 | 438 | 85 | 435 | 1.84e-14 | 75.1 |
| Msa0495300 | MtrunA17_Chr2g0287821 | 22.120 | 434 | 277 | 16 | 58 | 436 | 15 | 442 | 4.04e-14 | 73.9 |
| Msa0495300 | MtrunA17_Chr8g0384731 | 25.694 | 432 | 255 | 24 | 46 | 438 | 21 | 425 | 2.25e-13 | 71.6 |
| Msa0495300 | MtrunA17_Chr2g0287861 | 22.561 | 328 | 212 | 13 | 108 | 397 | 50 | 373 | 1.28e-12 | 69.3 |
| Msa0495300 | MtrunA17_Chr1g0185661 | 24.138 | 348 | 197 | 13 | 146 | 436 | 81 | 418 | 3.72e-12 | 68.6 |
| Msa0495300 | MtrunA17_Chr1g0185661 | 22.995 | 374 | 232 | 15 | 110 | 436 | 706 | 1070 | 4.28e-11 | 65.5 |
| Msa0495300 | MtrunA17_Chr5g0419151 | 27.612 | 268 | 167 | 9 | 185 | 438 | 114 | 368 | 2.31e-11 | 65.1 |
| Msa0495300 | MtrunA17_Chr4g0065581 | 22.967 | 418 | 240 | 16 | 87 | 436 | 38 | 441 | 3.47e-11 | 65.1 |
| Msa0495300 | MtrunA17_Chr2g0287811 | 24.682 | 393 | 219 | 19 | 102 | 436 | 40 | 413 | 3.62e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0495300 | AT5G07030.1 | 70.295 | 441 | 122 | 6 | 6 | 438 | 16 | 455 | 0.0 | 602 |
| Msa0495300 | AT3G54400.1 | 68.204 | 412 | 121 | 6 | 30 | 438 | 21 | 425 | 0.0 | 570 |
| Msa0495300 | AT1G09750.1 | 51.799 | 417 | 185 | 8 | 35 | 437 | 34 | 448 | 1.88e-140 | 409 |
| Msa0495300 | AT5G10770.1 | 31.382 | 427 | 255 | 13 | 38 | 438 | 60 | 474 | 3.02e-52 | 182 |
| Msa0495300 | AT3G25700.1 | 33.088 | 408 | 232 | 13 | 66 | 437 | 47 | 449 | 1.60e-51 | 180 |
| Msa0495300 | AT1G01300.1 | 33.807 | 352 | 214 | 8 | 99 | 437 | 139 | 484 | 2.37e-50 | 177 |
| Msa0495300 | AT3G61820.1 | 35.112 | 356 | 210 | 7 | 99 | 437 | 132 | 483 | 1.31e-49 | 176 |
| Msa0495300 | AT2G03200.1 | 31.180 | 356 | 213 | 9 | 99 | 430 | 104 | 451 | 4.45e-49 | 174 |
| Msa0495300 | AT5G10760.1 | 32.936 | 419 | 245 | 12 | 38 | 437 | 63 | 464 | 5.19e-48 | 171 |
| Msa0495300 | AT3G20015.1 | 33.429 | 350 | 215 | 8 | 99 | 437 | 128 | 470 | 7.94e-48 | 171 |
| Msa0495300 | AT3G18490.1 | 33.333 | 360 | 220 | 10 | 89 | 437 | 150 | 500 | 4.99e-45 | 164 |
| Msa0495300 | AT1G25510.1 | 30.670 | 388 | 237 | 10 | 73 | 437 | 105 | 483 | 1.84e-42 | 156 |
| Msa0495300 | AT1G79720.1 | 30.585 | 376 | 220 | 14 | 88 | 437 | 122 | 482 | 1.41e-39 | 148 |
| Msa0495300 | AT1G66180.1 | 30.424 | 401 | 234 | 18 | 72 | 438 | 38 | 427 | 2.93e-39 | 146 |
| Msa0495300 | AT3G52500.1 | 30.649 | 385 | 213 | 13 | 102 | 438 | 90 | 468 | 3.17e-39 | 147 |
| Msa0495300 | AT5G45120.1 | 30.500 | 400 | 210 | 15 | 102 | 437 | 83 | 478 | 5.50e-39 | 147 |
| Msa0495300 | AT5G37540.1 | 29.825 | 399 | 231 | 18 | 77 | 437 | 51 | 438 | 1.46e-37 | 142 |
| Msa0495300 | AT2G39710.1 | 30.458 | 371 | 212 | 16 | 101 | 433 | 64 | 426 | 2.00e-34 | 133 |
| Msa0495300 | AT3G59080.1 | 28.702 | 439 | 244 | 14 | 63 | 437 | 99 | 532 | 3.51e-34 | 134 |
| Msa0495300 | AT2G42980.1 | 30.052 | 386 | 232 | 13 | 85 | 437 | 144 | 524 | 5.54e-34 | 134 |
| Msa0495300 | AT1G64830.1 | 28.873 | 426 | 260 | 16 | 36 | 438 | 24 | 429 | 1.03e-33 | 131 |
| Msa0495300 | AT5G33340.1 | 27.446 | 419 | 272 | 15 | 37 | 437 | 30 | 434 | 7.08e-30 | 120 |
| Msa0495300 | AT5G22850.1 | 25.768 | 423 | 256 | 19 | 57 | 438 | 36 | 441 | 4.04e-28 | 116 |
| Msa0495300 | AT1G08210.1 | 28.469 | 418 | 253 | 16 | 55 | 438 | 36 | 441 | 5.24e-28 | 116 |
| Msa0495300 | AT4G30030.1 | 28.382 | 377 | 236 | 15 | 78 | 437 | 60 | 419 | 5.34e-28 | 115 |
| Msa0495300 | AT1G08210.4 | 28.469 | 418 | 253 | 16 | 55 | 438 | 70 | 475 | 6.53e-28 | 116 |
| Msa0495300 | AT5G02190.1 | 28.338 | 367 | 217 | 15 | 111 | 437 | 82 | 442 | 6.65e-28 | 115 |
| Msa0495300 | AT1G08210.3 | 28.058 | 417 | 256 | 15 | 55 | 438 | 84 | 489 | 8.16e-28 | 116 |
| Msa0495300 | AT4G30040.1 | 28.141 | 398 | 235 | 16 | 64 | 430 | 48 | 425 | 8.66e-28 | 114 |
| Msa0495300 | AT2G23945.1 | 26.683 | 416 | 254 | 17 | 57 | 437 | 49 | 448 | 2.20e-27 | 114 |
| Msa0495300 | AT3G59080.2 | 27.765 | 425 | 230 | 13 | 63 | 437 | 99 | 496 | 5.27e-27 | 113 |
| Msa0495300 | AT3G12700.1 | 28.125 | 416 | 250 | 16 | 56 | 438 | 62 | 461 | 5.71e-27 | 112 |
| Msa0495300 | AT3G02740.1 | 27.833 | 406 | 240 | 19 | 67 | 438 | 54 | 440 | 1.77e-26 | 111 |
| Msa0495300 | AT3G02740.2 | 28.571 | 371 | 216 | 18 | 102 | 438 | 10 | 365 | 4.74e-26 | 109 |
| Msa0495300 | AT1G08210.2 | 29.730 | 370 | 220 | 13 | 55 | 392 | 36 | 397 | 1.34e-25 | 109 |
| Msa0495300 | AT5G43100.2 | 25.337 | 371 | 229 | 17 | 95 | 438 | 69 | 418 | 1.06e-24 | 106 |
| Msa0495300 | AT5G43100.1 | 25.824 | 364 | 222 | 17 | 102 | 438 | 76 | 418 | 1.06e-24 | 107 |
| Msa0495300 | AT2G28040.2 | 27.794 | 349 | 202 | 16 | 96 | 424 | 50 | 368 | 5.00e-23 | 100 |
| Msa0495300 | AT2G28040.1 | 27.794 | 349 | 202 | 16 | 96 | 424 | 59 | 377 | 7.13e-23 | 100 |
| Msa0495300 | AT2G28030.1 | 27.419 | 310 | 191 | 11 | 102 | 397 | 61 | 350 | 9.10e-23 | 100 |
| Msa0495300 | AT3G50050.1 | 27.123 | 365 | 218 | 18 | 102 | 438 | 93 | 437 | 1.25e-22 | 101 |
| Msa0495300 | AT4G16563.1 | 27.635 | 427 | 222 | 16 | 88 | 437 | 75 | 491 | 1.46e-22 | 100 |
| Msa0495300 | AT2G36670.4 | 24.665 | 373 | 231 | 16 | 102 | 438 | 34 | 392 | 4.48e-22 | 98.6 |
| Msa0495300 | AT2G36670.3 | 24.665 | 373 | 231 | 16 | 102 | 438 | 34 | 392 | 4.48e-22 | 98.6 |
| Msa0495300 | AT2G35615.1 | 27.273 | 473 | 274 | 22 | 7 | 438 | 1 | 444 | 4.56e-22 | 98.6 |
| Msa0495300 | AT5G36260.1 | 24.457 | 368 | 236 | 17 | 102 | 438 | 78 | 434 | 5.13e-22 | 98.6 |
| Msa0495300 | AT1G05840.1 | 27.346 | 373 | 222 | 17 | 102 | 438 | 80 | 439 | 5.26e-22 | 98.6 |
| Msa0495300 | AT2G36670.2 | 23.721 | 430 | 272 | 17 | 51 | 438 | 43 | 458 | 6.55e-22 | 98.6 |
| Msa0495300 | AT2G36670.1 | 24.665 | 373 | 231 | 16 | 102 | 438 | 105 | 463 | 9.51e-22 | 98.2 |
| Msa0495300 | AT1G31450.1 | 27.231 | 437 | 257 | 19 | 39 | 438 | 30 | 442 | 2.46e-21 | 96.3 |
| Msa0495300 | AT2G28010.1 | 25.146 | 342 | 221 | 12 | 96 | 424 | 59 | 378 | 8.82e-21 | 94.4 |
| Msa0495300 | AT2G28225.1 | 28.045 | 353 | 200 | 17 | 102 | 430 | 67 | 389 | 9.94e-21 | 94.0 |
| Msa0495300 | AT3G51350.1 | 26.720 | 378 | 208 | 17 | 102 | 437 | 102 | 452 | 7.10e-19 | 89.4 |
| Msa0495300 | AT1G65240.1 | 24.804 | 383 | 241 | 18 | 88 | 438 | 60 | 427 | 1.14e-18 | 88.6 |
| Msa0495300 | AT3G25700.2 | 34.659 | 176 | 90 | 8 | 66 | 219 | 47 | 219 | 6.16e-18 | 85.1 |
| Msa0495300 | AT3G25700.2 | 33.588 | 131 | 79 | 2 | 313 | 437 | 219 | 347 | 2.61e-11 | 65.1 |
| Msa0495300 | AT3G51340.2 | 25.606 | 371 | 215 | 15 | 102 | 437 | 103 | 447 | 1.92e-17 | 85.1 |
| Msa0495300 | AT2G28220.1 | 26.087 | 345 | 206 | 14 | 102 | 424 | 67 | 384 | 2.48e-17 | 84.0 |
| Msa0495300 | AT3G51360.9 | 23.770 | 366 | 230 | 13 | 102 | 437 | 99 | 445 | 3.58e-15 | 77.8 |
| Msa0495300 | AT3G51360.7 | 23.562 | 365 | 232 | 12 | 102 | 437 | 5 | 351 | 3.82e-15 | 77.4 |
| Msa0495300 | AT1G77480.2 | 26.984 | 378 | 209 | 21 | 102 | 437 | 67 | 419 | 3.94e-15 | 77.4 |
| Msa0495300 | AT1G77480.1 | 26.984 | 378 | 209 | 21 | 102 | 437 | 67 | 419 | 3.97e-15 | 77.8 |
| Msa0495300 | AT3G51360.1 | 23.562 | 365 | 232 | 12 | 102 | 437 | 89 | 435 | 4.85e-15 | 77.4 |
| Msa0495300 | AT2G17760.1 | 24.112 | 394 | 231 | 18 | 85 | 437 | 83 | 449 | 6.12e-15 | 77.4 |
| Msa0495300 | AT4G33490.2 | 24.599 | 374 | 210 | 17 | 102 | 431 | 60 | 405 | 8.17e-15 | 76.6 |
| Msa0495300 | AT5G10080.1 | 23.301 | 412 | 258 | 15 | 66 | 437 | 60 | 453 | 1.17e-14 | 76.3 |
| Msa0495300 | AT4G12920.1 | 22.034 | 354 | 234 | 13 | 102 | 437 | 58 | 387 | 5.46e-14 | 73.6 |
| Msa0495300 | AT4G33490.1 | 28.090 | 267 | 146 | 14 | 102 | 345 | 57 | 300 | 7.61e-14 | 73.2 |
| Msa0495300 | AT3G51360.6 | 24.047 | 341 | 210 | 13 | 102 | 412 | 99 | 420 | 8.73e-13 | 70.5 |
| Msa0495300 | AT3G51360.10 | 24.047 | 341 | 210 | 13 | 102 | 412 | 89 | 410 | 1.31e-12 | 69.7 |
| Msa0495300 | AT3G42550.1 | 20.588 | 408 | 261 | 13 | 51 | 438 | 26 | 390 | 4.84e-12 | 67.8 |
| Msa0495300 | AT3G51360.5 | 24.845 | 322 | 193 | 13 | 108 | 399 | 105 | 407 | 5.11e-12 | 67.8 |
| Msa0495300 | AT1G44130.1 | 25.714 | 385 | 203 | 19 | 102 | 437 | 49 | 399 | 5.12e-12 | 67.8 |
| Msa0495300 | AT3G51360.4 | 25.338 | 296 | 172 | 13 | 108 | 373 | 95 | 371 | 5.63e-12 | 67.8 |
| Msa0495300 | AT1G03220.1 | 22.603 | 438 | 244 | 17 | 50 | 436 | 24 | 417 | 3.57e-11 | 65.1 |
| Msa0495300 | AT3G51360.2 | 25.573 | 262 | 152 | 11 | 102 | 339 | 99 | 341 | 4.14e-11 | 64.7 |
| Msa0495300 | AT1G03230.1 | 24.242 | 363 | 228 | 16 | 117 | 436 | 60 | 418 | 7.83e-11 | 64.3 |
Find 163 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGTACTCCATTTATATTAA+TGG | 0.165093 | 3_4:-24347227 | Msa0495300:three_prime_UTR |
| ATGTGGACTGATAGAGATTT+TGG | 0.173138 | 3_4:+24348121 | None:intergenic |
| TTTATTTCAAAAGACCAATT+TGG | 0.181501 | 3_4:-24350651 | Msa0495300:five_prime_UTR |
| ATGTTAACTTGGAAGCAATT+AGG | 0.215956 | 3_4:-24347969 | Msa0495300:CDS |
| ATTAAACCCATTAATATAAA+TGG | 0.223087 | 3_4:+24347220 | None:intergenic |
| TACATTGTTAGGGCTAAAAT+TGG | 0.237202 | 3_4:-24350276 | Msa0495300:CDS |
| AAAGTCCAACTTACATTGTT+AGG | 0.240995 | 3_4:-24350287 | Msa0495300:CDS |
| TCGTGCAAGTTCACGGGTTA+TGG | 0.253778 | 3_4:-24346964 | Msa0495300:three_prime_UTR |
| TTCAAGTCTCTTAACTTCTC+TGG | 0.284577 | 3_4:-24348078 | Msa0495300:CDS |
| TCAGCCCATGTTCCCCATTT+AGG | 0.285170 | 3_4:-24350443 | Msa0495300:CDS |
| TGGTTGTTATGGTGAGATTT+TGG | 0.289582 | 3_4:+24350574 | None:intergenic |
| TGCCCCACCACAAGGTCTAT+TGG | 0.290920 | 3_4:-24348181 | Msa0495300:CDS |
| TTGTTTGGGTAATGGTAATA+TGG | 0.291779 | 3_4:-24347247 | Msa0495300:three_prime_UTR |
| TTGTCTTGGACATCACATTT+GGG | 0.295714 | 3_4:+24350495 | None:intergenic |
| GGTACTCCATTTATATTAAT+GGG | 0.303529 | 3_4:-24347226 | Msa0495300:three_prime_UTR |
| ATGGCATTAGAAAAGTTGTT+TGG | 0.306401 | 3_4:-24347262 | Msa0495300:three_prime_UTR |
| TAATAGAGTGATGATCTTCT+AGG | 0.307781 | 3_4:+24347991 | None:intergenic |
| GCTAGTTGCACCAGCCTATC+TGG | 0.308767 | 3_4:-24347637 | Msa0495300:CDS |
| AATTTAATCCACACACAATA+TGG | 0.311808 | 3_4:+24347137 | None:intergenic |
| GCCGGTACCATCTTTGATTC+AGG | 0.315313 | 3_4:-24347886 | Msa0495300:intron |
| TGTTAACTTGGAAGCAATTA+GGG | 0.316746 | 3_4:-24347968 | Msa0495300:CDS |
| TTGAAGTCTAGTTGTGTCTT+TGG | 0.320386 | 3_4:+24350374 | None:intergenic |
| GTTATTGTAGGTACAACTAT+TGG | 0.323574 | 3_4:+24347531 | None:intergenic |
| ACCACAAGGTCTATTGGGCT+TGG | 0.324083 | 3_4:-24348175 | Msa0495300:CDS |
| ATTGTCTTGGACATCACATT+TGG | 0.331624 | 3_4:+24350494 | None:intergenic |
| TCAATTGTACCTATTGCTTC+TGG | 0.339113 | 3_4:-24350324 | Msa0495300:CDS |
| GCAACACCAACCCTAGAGTT+AGG | 0.342924 | 3_4:+24347336 | None:intergenic |
| TTATTTCAAAAGACCAATTT+GGG | 0.345523 | 3_4:-24350650 | Msa0495300:five_prime_UTR |
| TGGGGTTTAGTCCTTGGACT+AGG | 0.351891 | 3_4:+24350514 | None:intergenic |
| TCCACCTCAAACTTTGCTTT+TGG | 0.353103 | 3_4:-24350250 | Msa0495300:CDS |
| CACATTTGGGGTTTAGTCCT+TGG | 0.354918 | 3_4:+24350508 | None:intergenic |
| GGCCATTAAAACCACTTTCA+TGG | 0.355086 | 3_4:-24350422 | Msa0495300:CDS |
| GCCCCACCACAAGGTCTATT+GGG | 0.360432 | 3_4:-24348180 | Msa0495300:CDS |
| TGAGCTATGTACTTAATAAA+TGG | 0.364343 | 3_4:-24347310 | Msa0495300:exon |
| AAGGTTTGATTCTAACTATA+TGG | 0.365181 | 3_4:-24347183 | Msa0495300:three_prime_UTR |
| TTCTCTGGGTCTTTGAGACT+TGG | 0.367422 | 3_4:-24348063 | Msa0495300:CDS |
| ATCCTCTTCGGCTGAGCAAC+AGG | 0.372308 | 3_4:+24348039 | None:intergenic |
| TTGTGTCTTTGGCTTGCATT+TGG | 0.373872 | 3_4:+24350385 | None:intergenic |
| CCGAATGTGTAGCTAGGAAC+TGG | 0.381713 | 3_4:+24348231 | None:intergenic |
| GTATGAATATGCAGCTTTGC+TGG | 0.388519 | 3_4:-24346890 | Msa0495300:three_prime_UTR |
| TAGAAAAGTTGTTTGGGTAA+TGG | 0.389268 | 3_4:-24347255 | Msa0495300:three_prime_UTR |
| TGTGAGTTTCATGGTTGTTA+TGG | 0.390192 | 3_4:+24350563 | None:intergenic |
| TGGCATTAGAAAAGTTGTTT+GGG | 0.395633 | 3_4:-24347261 | Msa0495300:three_prime_UTR |
| TTATTGTAGGTACAACTATT+GGG | 0.398273 | 3_4:+24347532 | None:intergenic |
| CGCCGGCAGCACCACGTGTT+TGG | 0.401000 | 3_4:-24347448 | Msa0495300:CDS |
| GAAAGGGCAAAGACCCAAAT+TGG | 0.401759 | 3_4:+24350637 | None:intergenic |
| CAACACCGAGTTCACGTTAT+CGG | 0.406159 | 3_4:+24347410 | None:intergenic |
| TCAAGTCTCTTAACTTCTCT+GGG | 0.406816 | 3_4:-24348077 | Msa0495300:CDS |
| AGGGATGTCACTGTGAGCTT+TGG | 0.406981 | 3_4:+24347582 | None:intergenic |
| GAGGGAAAGTGTGAGTTTCA+TGG | 0.412360 | 3_4:+24350554 | None:intergenic |
| AACACCGAGTTCACGTTATC+GGG | 0.416344 | 3_4:+24347411 | None:intergenic |
| TTCCTCTATTGCAGCTAACT+TGG | 0.417975 | 3_4:-24348283 | Msa0495300:CDS |
| GGTCTATTGGGCTTGGGCCG+AGG | 0.426354 | 3_4:-24348168 | Msa0495300:CDS |
| CTTGGACTAGGGAGAGGAAT+AGG | 0.438297 | 3_4:+24350526 | None:intergenic |
| GGATTAAACGCCAATGCAGC+TGG | 0.439884 | 3_4:+24347919 | None:intergenic |
| GGCCAAACACGTGGTGCTGC+CGG | 0.452339 | 3_4:+24347446 | None:intergenic |
| AAGTCCAACTTACATTGTTA+GGG | 0.456447 | 3_4:-24350286 | Msa0495300:CDS |
| TCATTGATGTCCCTAACTCT+AGG | 0.457703 | 3_4:-24347347 | Msa0495300:CDS |
| CTACAAATATAACTCAACTT+TGG | 0.457733 | 3_4:+24347103 | None:intergenic |
| ATGAGTTCCGGCGAAGAGTT+GGG | 0.462368 | 3_4:-24347605 | Msa0495300:CDS |
| CCACAAGGTCTATTGGGCTT+GGG | 0.462842 | 3_4:-24348174 | Msa0495300:CDS |
| GGGGTTTAGTCCTTGGACTA+GGG | 0.468206 | 3_4:+24350515 | None:intergenic |
| TACCAAGTTAGCTGCAATAG+AGG | 0.469055 | 3_4:+24348281 | None:intergenic |
| TGTCTTTGGCTTGCATTTGG+AGG | 0.469936 | 3_4:+24350388 | None:intergenic |
| TGCTGCTCCTGAATGCAAAC+AGG | 0.470735 | 3_4:-24350118 | Msa0495300:intron |
| TAATTAATCGTGCAAGTTCA+CGG | 0.477436 | 3_4:-24346971 | Msa0495300:three_prime_UTR |
| GGGGTATACTTAATCCTCTT+CGG | 0.479266 | 3_4:+24348027 | None:intergenic |
| TCTCTGGGTCTTTGAGACTT+GGG | 0.480344 | 3_4:-24348062 | Msa0495300:CDS |
| ATCACTCTATTATGTTAACT+TGG | 0.480477 | 3_4:-24347980 | Msa0495300:CDS |
| TAGAGGAACTGCCATAGGTT+AGG | 0.483289 | 3_4:+24348298 | None:intergenic |
| GTTATCGGGCGCGGCCGCCA+TGG | 0.483735 | 3_4:+24347425 | None:intergenic |
| ATTCCTTGCACTGCTTGTGA+TGG | 0.484236 | 3_4:-24350198 | Msa0495300:CDS |
| TTCTAGCTACTAAACTATCA+AGG | 0.484499 | 3_4:+24350349 | None:intergenic |
| GGCTGAACACATGGATCACT+TGG | 0.485339 | 3_4:+24350460 | None:intergenic |
| TGGCGGTCAGAGATGAGTTC+CGG | 0.485880 | 3_4:-24347617 | Msa0495300:CDS |
| TGCAATTTCAACCTAACCTA+TGG | 0.486060 | 3_4:-24348309 | Msa0495300:CDS |
| GCCATTAAAACCACTTTCAT+GGG | 0.487475 | 3_4:-24350421 | Msa0495300:CDS |
| AGGAACTGGGTCAGTGGCTA+AGG | 0.488633 | 3_4:+24348245 | None:intergenic |
| CATGAGCTCACACCACAACT+AGG | 0.490130 | 3_4:+24348330 | None:intergenic |
| AGCATGTGTCAAACCCTCCT+AGG | 0.490363 | 3_4:+24347562 | None:intergenic |
| AATGGCCTAAATGGGGAACA+TGG | 0.493004 | 3_4:+24350438 | None:intergenic |
| TTAGCCCTAACAATGTAAGT+TGG | 0.493596 | 3_4:+24350282 | None:intergenic |
| AATTAATCGTGCAAGTTCAC+GGG | 0.495787 | 3_4:-24346970 | Msa0495300:three_prime_UTR |
| CGATATTCCTCCAGCTGCAT+TGG | 0.496924 | 3_4:-24347929 | Msa0495300:CDS |
| TTTGAGACAAAAGTGACAAC+GGG | 0.499233 | 3_4:+24348145 | None:intergenic |
| GATGAGTTCCGGCGAAGAGT+TGG | 0.502728 | 3_4:-24347606 | Msa0495300:CDS |
| CATTGATGTCCCTAACTCTA+GGG | 0.503024 | 3_4:-24347346 | Msa0495300:CDS |
| ACAAAAGTGACAACGGGCCT+CGG | 0.507840 | 3_4:+24348151 | None:intergenic |
| CAGCACCACGTGTTTGGCCA+TGG | 0.508117 | 3_4:-24347442 | Msa0495300:CDS |
| TAGACCTTGTGGTGGGGCAG+AGG | 0.509813 | 3_4:+24348185 | None:intergenic |
| CCAGTTCCTAGCTACACATT+CGG | 0.509931 | 3_4:-24348231 | Msa0495300:CDS |
| GAGAACATGAATGTTATTGT+AGG | 0.510584 | 3_4:+24347519 | None:intergenic |
| TCTCTGACCGCCAGATAGGC+TGG | 0.513052 | 3_4:+24347627 | None:intergenic |
| TTCTAGGGTTCTTGAGAAGA+GGG | 0.513267 | 3_4:+24348007 | None:intergenic |
| ATCTGTCTACCAGAAGCAAT+AGG | 0.513295 | 3_4:+24350315 | None:intergenic |
| AACTTGGAAGCAATTAGGGT+TGG | 0.515766 | 3_4:-24347964 | Msa0495300:CDS |
| CAACACCAACCCTAGAGTTA+GGG | 0.517242 | 3_4:+24347337 | None:intergenic |
| CTCATCTCTGACCGCCAGAT+AGG | 0.517456 | 3_4:+24347623 | None:intergenic |
| TTGGCGTTTAATCCGACCAC+TGG | 0.521822 | 3_4:-24347910 | Msa0495300:CDS |
| TACCAGGTACCGTGTTTACT+CGG | 0.522295 | 3_4:-24347659 | Msa0495300:intron |
| GGGAACATGGGCTGAACACA+TGG | 0.522926 | 3_4:+24350451 | None:intergenic |
| TGGTGGGGCAGAGGTGCCTG+TGG | 0.527039 | 3_4:+24348194 | None:intergenic |
| ACAATAACATTCATGTTCTC+CGG | 0.529103 | 3_4:-24347516 | Msa0495300:CDS |
| ACACTTTCTTCCCATGAAAG+TGG | 0.533013 | 3_4:+24350411 | None:intergenic |
| AATAGAGTGATGATCTTCTA+GGG | 0.533715 | 3_4:+24347992 | None:intergenic |
| CTTCTAGGGTTCTTGAGAAG+AGG | 0.543537 | 3_4:+24348006 | None:intergenic |
| TTAGTCCTTGGACTAGGGAG+AGG | 0.549316 | 3_4:+24350520 | None:intergenic |
| CTCACACCACAACTAGGGTT+AGG | 0.549658 | 3_4:+24348336 | None:intergenic |
| GATGTCCCTAACTCTAGGGT+TGG | 0.549992 | 3_4:-24347342 | Msa0495300:CDS |
| GGCCGCCATGGCCAAACACG+TGG | 0.551379 | 3_4:+24347437 | None:intergenic |
| ATGGTACCGGCTCCAGTGGT+CGG | 0.555264 | 3_4:+24347898 | None:intergenic |
| ATACTAGTAATGATGCTGCT+TGG | 0.557490 | 3_4:-24350221 | Msa0495300:CDS |
| CGCGCCCGATAACGTGAACT+CGG | 0.559463 | 3_4:-24347415 | Msa0495300:CDS |
| CGAGTTCACGTTATCGGGCG+CGG | 0.560682 | 3_4:+24347416 | None:intergenic |
| CTATTCCTCTCCCTAGTCCA+AGG | 0.561125 | 3_4:-24350525 | Msa0495300:CDS |
| ACCTGAATCAAAGATGGTAC+CGG | 0.564438 | 3_4:+24347885 | None:intergenic |
| AAGCTCACAGTGACATCCCT+AGG | 0.564717 | 3_4:-24347579 | Msa0495300:CDS |
| AGCCCAATAGACCTTGTGGT+GGG | 0.567593 | 3_4:+24348178 | None:intergenic |
| TGTCTTGGACATCACATTTG+GGG | 0.569858 | 3_4:+24350496 | None:intergenic |
| TTTAATCCGACCACTGGAGC+CGG | 0.572128 | 3_4:-24347904 | Msa0495300:CDS |
| TAATGGTGAGTGTGTGTCAC+GGG | 0.573160 | 3_4:-24347074 | Msa0495300:three_prime_UTR |
| AAGTTAAGAGACTTGAAACT+TGG | 0.573810 | 3_4:+24348084 | None:intergenic |
| GGCCTGTTGCTCAGCCGAAG+AGG | 0.573842 | 3_4:-24348041 | Msa0495300:CDS |
| CAGGTACCTAACCCTAGTTG+TGG | 0.574866 | 3_4:-24348342 | Msa0495300:CDS |
| GCATGTGTCAAACCCTCCTA+GGG | 0.576135 | 3_4:+24347563 | None:intergenic |
| GGGAGAGGAATAGGAACAAG+AGG | 0.576994 | 3_4:+24350535 | None:intergenic |
| GGAGTGTTGAGCCATTGTCT+TGG | 0.579994 | 3_4:+24350481 | None:intergenic |
| ATAGCCAAAAGCAAAGTTTG+AGG | 0.580224 | 3_4:+24350246 | None:intergenic |
| TGGCAATGTCACGTTCATGC+CGG | 0.582971 | 3_4:+24347497 | None:intergenic |
| GCTTTGGCCCAACTCTTCGC+CGG | 0.583717 | 3_4:+24347598 | None:intergenic |
| GGTGTTACCTGAATCAAAGA+TGG | 0.585226 | 3_4:+24347879 | None:intergenic |
| CGAATGTGTAGCTAGGAACT+GGG | 0.588782 | 3_4:+24348232 | None:intergenic |
| GCCCAATAGACCTTGTGGTG+GGG | 0.592501 | 3_4:+24348179 | None:intergenic |
| ACACAACCGAATGTGTAGCT+AGG | 0.605985 | 3_4:+24348225 | None:intergenic |
| GGCACCTCTGCCCCACCACA+AGG | 0.606822 | 3_4:-24348189 | Msa0495300:CDS |
| TGGCAAACAGTAAGAGAATG+TGG | 0.607273 | 3_4:+24348104 | None:intergenic |
| CAAACACGTGGTGCTGCCGG+CGG | 0.607352 | 3_4:+24347449 | None:intergenic |
| GCCAAAAGCAAAGTTTGAGG+TGG | 0.608306 | 3_4:+24350249 | None:intergenic |
| AAAGATGGTACCGGCTCCAG+TGG | 0.608353 | 3_4:+24347894 | None:intergenic |
| CAAGCTAGATAGCTAGCTAG+AGG | 0.612434 | 3_4:+24347043 | None:intergenic |
| TGCAATAGAGGAACTGCCAT+AGG | 0.614874 | 3_4:+24348293 | None:intergenic |
| ATGAGCTCACACCACAACTA+GGG | 0.616988 | 3_4:+24348331 | None:intergenic |
| AAGCCCAATAGACCTTGTGG+TGG | 0.617029 | 3_4:+24348177 | None:intergenic |
| GTAATGGTGAGTGTGTGTCA+CGG | 0.620572 | 3_4:-24347075 | Msa0495300:three_prime_UTR |
| TGCAACTAGCCGAGTAAACA+CGG | 0.620584 | 3_4:+24347650 | None:intergenic |
| CAACCATCACAAGCAGTGCA+AGG | 0.621327 | 3_4:+24350195 | None:intergenic |
| AAATGTGATGTCCAAGACAA+TGG | 0.621832 | 3_4:-24350492 | Msa0495300:CDS |
| CCCAAGCCCAATAGACCTTG+TGG | 0.625674 | 3_4:+24348174 | None:intergenic |
| ATGGCCTAAATGGGGAACAT+GGG | 0.626148 | 3_4:+24350439 | None:intergenic |
| CTCACAGTGACATCCCTAGG+AGG | 0.629537 | 3_4:-24347576 | Msa0495300:CDS |
| GTAGCTAGGAACTGGGTCAG+TGG | 0.633103 | 3_4:+24348239 | None:intergenic |
| ATACTTATACATAGCACCGC+CGG | 0.638148 | 3_4:-24347465 | Msa0495300:CDS |
| GGAGAGGAATAGGAACAAGA+GGG | 0.641689 | 3_4:+24350536 | None:intergenic |
| TCACAGTGACATCCCTAGGA+GGG | 0.649521 | 3_4:-24347575 | Msa0495300:CDS |
| TGTATAAGTATGTTGTCTTG+TGG | 0.652472 | 3_4:+24347477 | None:intergenic |
| TCTAGGGTTCTTGAGAAGAG+GGG | 0.652701 | 3_4:+24348008 | None:intergenic |
| CACCACGTGTTTGGCCATGG+CGG | 0.653580 | 3_4:-24347439 | Msa0495300:CDS |
| TAAGAACTCCATATTGTGTG+TGG | 0.659295 | 3_4:-24347145 | Msa0495300:three_prime_UTR |
| GTTTGAGACAAAAGTGACAA+CGG | 0.666616 | 3_4:+24348144 | None:intergenic |
| TTAAACGCCAATGCAGCTGG+AGG | 0.669097 | 3_4:+24347922 | None:intergenic |
| AGTTGCACCAGCCTATCTGG+CGG | 0.702369 | 3_4:-24347634 | Msa0495300:CDS |
| TAGGGACATCAATGAGCACA+CGG | 0.705781 | 3_4:+24347355 | None:intergenic |
| GGACATCAATGAGCACACGG+TGG | 0.780138 | 3_4:+24347358 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTACAATTTTTTATGA+AGG | + | chr3_4:24347858-24347877 | None:intergenic | 10.0% |
| !!! | ATTAATTTGAAGAATTTAAT+TGG | + | chr3_4:24348334-24348353 | None:intergenic | 10.0% |
| !! | AATTAAATTCTTCAAATTAA+TGG | - | chr3_4:24348333-24348352 | Msa0495300:CDS | 10.0% |
| !! | CTATATATAGAAAAAAGAAA+GGG | + | chr3_4:24346876-24346895 | None:intergenic | 15.0% |
| !!! | TTTTTGTTAAAAAATTACGA+AGG | - | chr3_4:24347526-24347545 | Msa0495300:CDS | 15.0% |
| !!! | TTATATGCAAAATCTATTTT+TGG | - | chr3_4:24347889-24347908 | Msa0495300:CDS | 15.0% |
| !!! | TAGTGATTCAATAATTTTAT+TGG | + | chr3_4:24348291-24348310 | None:intergenic | 15.0% |
| !! | TACTATTGTAGTAAAATTTA+GGG | + | chr3_4:24348373-24348392 | None:intergenic | 15.0% |
| !!! | AAATGTTTTAAAATTGAGAT+AGG | + | chr3_4:24349056-24349075 | None:intergenic | 15.0% |
| !!! | ATTTTGTTTCATTTAAACAT+TGG | - | chr3_4:24349095-24349114 | Msa0495300:intron | 15.0% |
| !!! | TTTATTTTGTTTCATTTTTC+AGG | - | chr3_4:24349133-24349152 | Msa0495300:intron | 15.0% |
| !! | ATTAAACCCATTAATATAAA+TGG | + | chr3_4:24350277-24350296 | None:intergenic | 15.0% |
| !! | GCTATATATAGAAAAAAGAA+AGG | + | chr3_4:24346877-24346896 | None:intergenic | 20.0% |
| !!! | TTAAATGTAGTTGATTTTTC+AGG | + | chr3_4:24347344-24347363 | None:intergenic | 20.0% |
| !!! | GTTTTCGTGTTTTTATATAT+TGG | - | chr3_4:24347445-24347464 | Msa0495300:CDS | 20.0% |
| !!! | TCAACTCAGATTTTTAAATT+GGG | + | chr3_4:24347761-24347780 | None:intergenic | 20.0% |
| !!! | ATCAACTCAGATTTTTAAAT+TGG | + | chr3_4:24347762-24347781 | None:intergenic | 20.0% |
| !! | ACTAGCAAATTATTAGAAAA+AGG | + | chr3_4:24347834-24347853 | None:intergenic | 20.0% |
| !! | GTACTATTGTAGTAAAATTT+AGG | + | chr3_4:24348374-24348393 | None:intergenic | 20.0% |
| !! | ATTACTAACTTCATAATGAA+AGG | - | chr3_4:24348585-24348604 | Msa0495300:intron | 20.0% |
| !! | TTACTAACTTCATAATGAAA+GGG | - | chr3_4:24348586-24348605 | Msa0495300:intron | 20.0% |
| !!! | ATATTTTGGATTCATAGATT+GGG | + | chr3_4:24348690-24348709 | None:intergenic | 20.0% |
| !!! | AATATTTTGGATTCATAGAT+TGG | + | chr3_4:24348691-24348710 | None:intergenic | 20.0% |
| !! | TGTAATCATGGTTTAAAAAT+TGG | - | chr3_4:24348792-24348811 | Msa0495300:intron | 20.0% |
| !! | AAAGAATCATGATATGATTA+TGG | + | chr3_4:24349797-24349816 | None:intergenic | 20.0% |
| !! | ATTTATTGTTAAACATTACC+AGG | - | chr3_4:24349819-24349838 | Msa0495300:intron | 20.0% |
| !!! | TTAATTTTTAGCATATGGTA+AGG | - | chr3_4:24350292-24350311 | Msa0495300:CDS | 20.0% |
| !!! | TATATTTGTAGCTTTTGTAA+TGG | - | chr3_4:24350403-24350422 | Msa0495300:CDS | 20.0% |
| !!! | TTTGTTTTGTCACTTTAAAA+AGG | - | chr3_4:24350646-24350665 | Msa0495300:five_prime_UTR | 20.0% |
| ! | CTAGTACTTATTTAGATTTG+TGG | + | chr3_4:24347578-24347597 | None:intergenic | 25.0% |
| ! | CACAAATCTAAATAAGTACT+AGG | - | chr3_4:24347576-24347595 | Msa0495300:CDS | 25.0% |
| ! | AAAAGAATGGTTAGAAATTG+TGG | - | chr3_4:24347602-24347621 | Msa0495300:CDS | 25.0% |
| ! | AAATGATGCAAATGCAATTA+TGG | - | chr3_4:24347677-24347696 | Msa0495300:intron | 25.0% |
| !! | CAACTCAGATTTTTAAATTG+GGG | + | chr3_4:24347760-24347779 | None:intergenic | 25.0% |
| ! | AAAAAATAGATGTAAGAGCT+TGG | + | chr3_4:24347793-24347812 | None:intergenic | 25.0% |
| !! | TGTCGAATATTTGTTGAAAA+AGG | - | chr3_4:24347967-24347986 | Msa0495300:CDS | 25.0% |
| ! | TTTGTAAATTGTGACATTTG+AGG | + | chr3_4:24348178-24348197 | None:intergenic | 25.0% |
| ! | TTGTTTGAACTGATATACAA+TGG | - | chr3_4:24348243-24348262 | Msa0495300:CDS | 25.0% |
| !!! | AATGGTGAAAGATTTGTTTT+GGG | - | chr3_4:24348261-24348280 | Msa0495300:CDS | 25.0% |
| ! | TACTACAATAGTACAATACT+TGG | - | chr3_4:24348380-24348399 | Msa0495300:intron | 25.0% |
| ! | TATTGTTGTACCCATAAAAT+AGG | - | chr3_4:24348466-24348485 | Msa0495300:intron | 25.0% |
| !! | CTATGACTAACCTATTTTAT+GGG | + | chr3_4:24348479-24348498 | None:intergenic | 25.0% |
| !! | TCTATGACTAACCTATTTTA+TGG | + | chr3_4:24348480-24348499 | None:intergenic | 25.0% |
| !! | TTTTTCCAATGATGTAATCA+TGG | - | chr3_4:24348780-24348799 | Msa0495300:intron | 25.0% |
| ! | TTAAACCATGATTACATCAT+TGG | + | chr3_4:24348788-24348807 | None:intergenic | 25.0% |
| ! | GAATAAACCAACTGATAAAT+CGG | + | chr3_4:24348855-24348874 | None:intergenic | 25.0% |
| ! | TCAAAAATTGACCAATACAT+TGG | - | chr3_4:24348953-24348972 | Msa0495300:intron | 25.0% |
| ! | AAATAAACCAACCAATGTAT+TGG | + | chr3_4:24348967-24348986 | None:intergenic | 25.0% |
| !!! | ATACATTGGTTGGTTTATTT+TGG | - | chr3_4:24348967-24348986 | Msa0495300:intron | 25.0% |
| !!! | GGTTTATTTTGGTCTAATAA+TGG | - | chr3_4:24348978-24348997 | Msa0495300:intron | 25.0% |
| ! | GACTTATATCATGATTCAAT+TGG | + | chr3_4:24349018-24349037 | None:intergenic | 25.0% |
| ! | ATCACTCTATTATGTTAACT+TGG | - | chr3_4:24349514-24349533 | Msa0495300:intron | 25.0% |
| ! | TTATTGTAGGTACAACTATT+GGG | + | chr3_4:24349965-24349984 | None:intergenic | 25.0% |
| ! | TGAGCTATGTACTTAATAAA+TGG | - | chr3_4:24350184-24350203 | Msa0495300:CDS | 25.0% |
| ! | TGGTACTCCATTTATATTAA+TGG | - | chr3_4:24350267-24350286 | Msa0495300:CDS | 25.0% |
| ! | GGTACTCCATTTATATTAAT+GGG | - | chr3_4:24350268-24350287 | Msa0495300:CDS | 25.0% |
| !!! | TGGGTTTAATTTTTAGCATA+TGG | - | chr3_4:24350287-24350306 | Msa0495300:CDS | 25.0% |
| ! | AAGGTTTGATTCTAACTATA+TGG | - | chr3_4:24350311-24350330 | Msa0495300:CDS | 25.0% |
| ! | AATTTAATCCACACACAATA+TGG | + | chr3_4:24350360-24350379 | None:intergenic | 25.0% |
| ! | CTACAAATATAACTCAACTT+TGG | + | chr3_4:24350394-24350413 | None:intergenic | 25.0% |
| ! | TTCTAGCTACTAAACTATCA+AGG | + | chr3_4:24347148-24347167 | None:intergenic | 30.0% |
| AAAGTCCAACTTACATTGTT+AGG | - | chr3_4:24347207-24347226 | Msa0495300:three_prime_UTR | 30.0% | |
| AAGTCCAACTTACATTGTTA+GGG | - | chr3_4:24347208-24347227 | Msa0495300:three_prime_UTR | 30.0% | |
| TACATTGTTAGGGCTAAAAT+TGG | - | chr3_4:24347218-24347237 | Msa0495300:three_prime_UTR | 30.0% | |
| !!! | TTTTTTACCTGTTTGCATTC+AGG | + | chr3_4:24347386-24347405 | None:intergenic | 30.0% |
| AAGTACTAGGAAGAAAAGAA+TGG | - | chr3_4:24347589-24347608 | Msa0495300:CDS | 30.0% | |
| CATTTGCAGCAACAATATAA+AGG | + | chr3_4:24347729-24347748 | None:intergenic | 30.0% | |
| ! | ATGTTTTGTAAACTAGCTAG+TGG | - | chr3_4:24347917-24347936 | Msa0495300:CDS | 30.0% |
| GACAAAATAACGAGTATCTT+TGG | + | chr3_4:24348113-24348132 | None:intergenic | 30.0% | |
| !! | CAATGGTGAAAGATTTGTTT+TGG | - | chr3_4:24348260-24348279 | Msa0495300:CDS | 30.0% |
| !!! | ATGGTGAAAGATTTGTTTTG+GGG | - | chr3_4:24348262-24348281 | Msa0495300:CDS | 30.0% |
| ! | GCACATAGCTTTCAATATTT+TGG | + | chr3_4:24348704-24348723 | None:intergenic | 30.0% |
| ! | AAATTGACCGATTTATCAGT+TGG | - | chr3_4:24348845-24348864 | Msa0495300:intron | 30.0% |
| AAATTGACCAATACATTGGT+TGG | - | chr3_4:24348957-24348976 | Msa0495300:intron | 30.0% | |
| AAGTTAAGAGACTTGAAACT+TGG | + | chr3_4:24349413-24349432 | None:intergenic | 30.0% | |
| AATAGAGTGATGATCTTCTA+GGG | + | chr3_4:24349505-24349524 | None:intergenic | 30.0% | |
| TAATAGAGTGATGATCTTCT+AGG | + | chr3_4:24349506-24349525 | None:intergenic | 30.0% | |
| ! | ATGTTAACTTGGAAGCAATT+AGG | - | chr3_4:24349525-24349544 | Msa0495300:intron | 30.0% |
| ! | TGTTAACTTGGAAGCAATTA+GGG | - | chr3_4:24349526-24349545 | Msa0495300:intron | 30.0% |
| !!! | CTAAGAGTATTTTTTCATGC+CGG | + | chr3_4:24349653-24349672 | None:intergenic | 30.0% |
| GTTATTGTAGGTACAACTAT+TGG | + | chr3_4:24349966-24349985 | None:intergenic | 30.0% | |
| GAGAACATGAATGTTATTGT+AGG | + | chr3_4:24349978-24349997 | None:intergenic | 30.0% | |
| ACAATAACATTCATGTTCTC+CGG | - | chr3_4:24349978-24349997 | Msa0495300:intron | 30.0% | |
| TGTATAAGTATGTTGTCTTG+TGG | + | chr3_4:24350020-24350039 | None:intergenic | 30.0% | |
| ! | CACATAATCTTTTGTCAACA+TGG | - | chr3_4:24350213-24350232 | Msa0495300:CDS | 30.0% |
| ATGGCATTAGAAAAGTTGTT+TGG | - | chr3_4:24350232-24350251 | Msa0495300:CDS | 30.0% | |
| TGGCATTAGAAAAGTTGTTT+GGG | - | chr3_4:24350233-24350252 | Msa0495300:CDS | 30.0% | |
| TAGAAAAGTTGTTTGGGTAA+TGG | - | chr3_4:24350239-24350258 | Msa0495300:CDS | 30.0% | |
| ! | TTGTTTGGGTAATGGTAATA+TGG | - | chr3_4:24350247-24350266 | Msa0495300:CDS | 30.0% |
| TAATTAATCGTGCAAGTTCA+CGG | - | chr3_4:24350523-24350542 | Msa0495300:CDS | 30.0% | |
| ! | TGGTTGTTATGGTGAGATTT+TGG | + | chr3_4:24346923-24346942 | None:intergenic | 35.0% |
| TGTGAGTTTCATGGTTGTTA+TGG | + | chr3_4:24346934-24346953 | None:intergenic | 35.0% | |
| TTGTCTTGGACATCACATTT+GGG | + | chr3_4:24347002-24347021 | None:intergenic | 35.0% | |
| ATTGTCTTGGACATCACATT+TGG | + | chr3_4:24347003-24347022 | None:intergenic | 35.0% | |
| AAATGTGATGTCCAAGACAA+TGG | - | chr3_4:24347002-24347021 | Msa0495300:three_prime_UTR | 35.0% | |
| !!! | TGGTTTTAATGGCCTAAATG+GGG | + | chr3_4:24347066-24347085 | None:intergenic | 35.0% |
| !!! | GTGGTTTTAATGGCCTAAAT+GGG | + | chr3_4:24347067-24347086 | None:intergenic | 35.0% |
| !!! | AGTGGTTTTAATGGCCTAAA+TGG | + | chr3_4:24347068-24347087 | None:intergenic | 35.0% |
| GCCATTAAAACCACTTTCAT+GGG | - | chr3_4:24347073-24347092 | Msa0495300:three_prime_UTR | 35.0% | |
| !!! | TCCCATGAAAGTGGTTTTAA+TGG | + | chr3_4:24347077-24347096 | None:intergenic | 35.0% |
| TTGAAGTCTAGTTGTGTCTT+TGG | + | chr3_4:24347123-24347142 | None:intergenic | 35.0% | |
| TCAATTGTACCTATTGCTTC+TGG | - | chr3_4:24347170-24347189 | Msa0495300:three_prime_UTR | 35.0% | |
| TTAGCCCTAACAATGTAAGT+TGG | + | chr3_4:24347215-24347234 | None:intergenic | 35.0% | |
| ATAGCCAAAAGCAAAGTTTG+AGG | + | chr3_4:24347251-24347270 | None:intergenic | 35.0% | |
| !! | TCAAACTTTGCTTTTGGCTA+TGG | - | chr3_4:24347250-24347269 | Msa0495300:three_prime_UTR | 35.0% |
| ATACTAGTAATGATGCTGCT+TGG | - | chr3_4:24347273-24347292 | Msa0495300:three_prime_UTR | 35.0% | |
| ATGGTTAGAAATTGTGGTTG+TGG | - | chr3_4:24347608-24347627 | Msa0495300:CDS | 35.0% | |
| ATGCAATTATGGTTACGATG+TGG | - | chr3_4:24347688-24347707 | Msa0495300:intron | 35.0% | |
| AGTTAGTAATTACCCTTCCA+CGG | + | chr3_4:24348575-24348594 | None:intergenic | 35.0% | |
| TCATAATGAAAGGGACTACA+AGG | - | chr3_4:24348595-24348614 | Msa0495300:intron | 35.0% | |
| ! | ATCGAAGCACTCGTATTAAT+CGG | - | chr3_4:24348815-24348834 | Msa0495300:intron | 35.0% |
| ! | ATCAGTTGGTTTATTCTCGA+TGG | - | chr3_4:24348859-24348878 | Msa0495300:intron | 35.0% |
| TAGATTGAACTGAGTCGAAT+AGG | - | chr3_4:24348901-24348920 | Msa0495300:intron | 35.0% | |
| TGCAATTTCAACCTAACCTA+TGG | - | chr3_4:24349185-24349204 | Msa0495300:intron | 35.0% | |
| ! | TTTGAGACAAAAGTGACAAC+GGG | + | chr3_4:24349352-24349371 | None:intergenic | 35.0% |
| ! | GTTTGAGACAAAAGTGACAA+CGG | + | chr3_4:24349353-24349372 | None:intergenic | 35.0% |
| !! | TGTGGACTGATAGAGATTTT+GGG | + | chr3_4:24349375-24349394 | None:intergenic | 35.0% |
| !! | ATGTGGACTGATAGAGATTT+TGG | + | chr3_4:24349376-24349395 | None:intergenic | 35.0% |
| TTCAAGTCTCTTAACTTCTC+TGG | - | chr3_4:24349416-24349435 | Msa0495300:intron | 35.0% | |
| TCAAGTCTCTTAACTTCTCT+GGG | - | chr3_4:24349417-24349436 | Msa0495300:intron | 35.0% | |
| TAAGAACTCCATATTGTGTG+TGG | - | chr3_4:24350349-24350368 | Msa0495300:CDS | 35.0% | |
| AATTAATCGTGCAAGTTCAC+GGG | - | chr3_4:24350524-24350543 | Msa0495300:CDS | 35.0% | |
| TGTCTTGGACATCACATTTG+GGG | + | chr3_4:24347001-24347020 | None:intergenic | 40.0% | |
| GGCCATTAAAACCACTTTCA+TGG | - | chr3_4:24347072-24347091 | Msa0495300:three_prime_UTR | 40.0% | |
| ACACTTTCTTCCCATGAAAG+TGG | + | chr3_4:24347086-24347105 | None:intergenic | 40.0% | |
| !! | TTGTGTCTTTGGCTTGCATT+TGG | + | chr3_4:24347112-24347131 | None:intergenic | 40.0% |
| ATCTGTCTACCAGAAGCAAT+AGG | + | chr3_4:24347182-24347201 | None:intergenic | 40.0% | |
| ! | TCCACCTCAAACTTTGCTTT+TGG | - | chr3_4:24347244-24347263 | Msa0495300:three_prime_UTR | 40.0% |
| TTACGCTGCAGACTTTGATA+TGG | - | chr3_4:24347643-24347662 | Msa0495300:CDS | 40.0% | |
| AGTTCACATGACATACAGCT+TGG | - | chr3_4:24348526-24348545 | Msa0495300:intron | 40.0% | |
| ! | TCTTTTACCTTTACTTGCCG+TGG | - | chr3_4:24348555-24348574 | Msa0495300:intron | 40.0% |
| ! | TGCAACTTTTGTCCCATTGT+AGG | - | chr3_4:24348643-24348662 | Msa0495300:intron | 40.0% |
| ! | GCAACTTTTGTCCCATTGTA+GGG | - | chr3_4:24348644-24348663 | Msa0495300:intron | 40.0% |
| TTCCTCTATTGCAGCTAACT+TGG | - | chr3_4:24349211-24349230 | Msa0495300:intron | 40.0% | |
| TACCAAGTTAGCTGCAATAG+AGG | + | chr3_4:24349216-24349235 | None:intergenic | 40.0% | |
| GGTTGTGTTTCAAAAACCAC+AGG | - | chr3_4:24349284-24349303 | Msa0495300:intron | 40.0% | |
| TGGCAAACAGTAAGAGAATG+TGG | + | chr3_4:24349393-24349412 | None:intergenic | 40.0% | |
| GGGGTATACTTAATCCTCTT+CGG | + | chr3_4:24349470-24349489 | None:intergenic | 40.0% | |
| !! | TTCTAGGGTTCTTGAGAAGA+GGG | + | chr3_4:24349490-24349509 | None:intergenic | 40.0% |
| AACTTGGAAGCAATTAGGGT+TGG | - | chr3_4:24349530-24349549 | Msa0495300:intron | 40.0% | |
| ! | GAGGAATATCGACGACTTTT+CGG | + | chr3_4:24349556-24349575 | None:intergenic | 40.0% |
| ACCTGAATCAAAGATGGTAC+CGG | + | chr3_4:24349612-24349631 | None:intergenic | 40.0% | |
| ! | GGTGTTACCTGAATCAAAGA+TGG | + | chr3_4:24349618-24349637 | None:intergenic | 40.0% |
| ! | TAACACCCTTTTACCTACTC+CGG | - | chr3_4:24349631-24349650 | Msa0495300:intron | 40.0% |
| !!! | GTATTTTTTCATGCCGGAGT+AGG | + | chr3_4:24349647-24349666 | None:intergenic | 40.0% |
| ATACTTATACATAGCACCGC+CGG | - | chr3_4:24350029-24350048 | Msa0495300:intron | 40.0% | |
| TCATTGATGTCCCTAACTCT+AGG | - | chr3_4:24350147-24350166 | Msa0495300:CDS | 40.0% | |
| CATTGATGTCCCTAACTCTA+GGG | - | chr3_4:24350148-24350167 | Msa0495300:CDS | 40.0% | |
| GTATGAATATGCAGCTTTGC+TGG | - | chr3_4:24350604-24350623 | Msa0495300:five_prime_UTR | 40.0% | |
| GAAAGGGCAAAGACCCAAAT+TGG | + | chr3_4:24346860-24346879 | None:intergenic | 45.0% | |
| ! | GAGGGAAAGTGTGAGTTTCA+TGG | + | chr3_4:24346943-24346962 | None:intergenic | 45.0% |
| GGAGAGGAATAGGAACAAGA+GGG | + | chr3_4:24346961-24346980 | None:intergenic | 45.0% | |
| ! | CACATTTGGGGTTTAGTCCT+TGG | + | chr3_4:24346989-24347008 | None:intergenic | 45.0% |
| ATGGCCTAAATGGGGAACAT+GGG | + | chr3_4:24347058-24347077 | None:intergenic | 45.0% | |
| AATGGCCTAAATGGGGAACA+TGG | + | chr3_4:24347059-24347078 | None:intergenic | 45.0% | |
| !! | TGTCTTTGGCTTGCATTTGG+AGG | + | chr3_4:24347109-24347128 | None:intergenic | 45.0% |
| GCCAAAAGCAAAGTTTGAGG+TGG | + | chr3_4:24347248-24347267 | None:intergenic | 45.0% | |
| ATTCCTTGCACTGCTTGTGA+TGG | - | chr3_4:24347296-24347315 | Msa0495300:three_prime_UTR | 45.0% | |
| TTACCTTTACTTGCCGTGGA+AGG | - | chr3_4:24348559-24348578 | Msa0495300:intron | 45.0% | |
| TACCTTTACTTGCCGTGGAA+GGG | - | chr3_4:24348560-24348579 | Msa0495300:intron | 45.0% | |
| ! | ACTTTTGTCCCATTGTAGGG+TGG | - | chr3_4:24348647-24348666 | Msa0495300:intron | 45.0% |
| ! | CTTTTGTCCCATTGTAGGGT+GGG | - | chr3_4:24348648-24348667 | Msa0495300:intron | 45.0% |
| ! | TTTTGTCCCATTGTAGGGTG+GGG | - | chr3_4:24348649-24348668 | Msa0495300:intron | 45.0% |
| TGAAAGCTATGTGCTCTCTG+TGG | - | chr3_4:24348710-24348729 | Msa0495300:intron | 45.0% | |
| ATGAGCTCACACCACAACTA+GGG | + | chr3_4:24349166-24349185 | None:intergenic | 45.0% | |
| TAGAGGAACTGCCATAGGTT+AGG | + | chr3_4:24349199-24349218 | None:intergenic | 45.0% | |
| TGCAATAGAGGAACTGCCAT+AGG | + | chr3_4:24349204-24349223 | None:intergenic | 45.0% | |
| CGAATGTGTAGCTAGGAACT+GGG | + | chr3_4:24349265-24349284 | None:intergenic | 45.0% | |
| CCAGTTCCTAGCTACACATT+CGG | - | chr3_4:24349263-24349282 | Msa0495300:intron | 45.0% | |
| ACACAACCGAATGTGTAGCT+AGG | + | chr3_4:24349272-24349291 | None:intergenic | 45.0% | |
| !! | TTCTCTGGGTCTTTGAGACT+TGG | - | chr3_4:24349431-24349450 | Msa0495300:intron | 45.0% |
| !! | TCTCTGGGTCTTTGAGACTT+GGG | - | chr3_4:24349432-24349451 | Msa0495300:intron | 45.0% |
| ! | TCTAGGGTTCTTGAGAAGAG+GGG | + | chr3_4:24349489-24349508 | None:intergenic | 45.0% |
| !! | CTTCTAGGGTTCTTGAGAAG+AGG | + | chr3_4:24349491-24349510 | None:intergenic | 45.0% |
| TCATGCCGGAGTAGGTAAAA+GGG | + | chr3_4:24349639-24349658 | None:intergenic | 45.0% | |
| TTCATGCCGGAGTAGGTAAA+AGG | + | chr3_4:24349640-24349659 | None:intergenic | 45.0% | |
| ! | TACCAGGTACCGTGTTTACT+CGG | - | chr3_4:24349835-24349854 | Msa0495300:intron | 45.0% |
| TGCAACTAGCCGAGTAAACA+CGG | + | chr3_4:24349847-24349866 | None:intergenic | 45.0% | |
| AACACCGAGTTCACGTTATC+GGG | + | chr3_4:24350086-24350105 | None:intergenic | 45.0% | |
| CAACACCGAGTTCACGTTAT+CGG | + | chr3_4:24350087-24350106 | None:intergenic | 45.0% | |
| !!! | GTGGTTTTGTTGCTGCATGT+TGG | + | chr3_4:24350120-24350139 | None:intergenic | 45.0% |
| TAGGGACATCAATGAGCACA+CGG | + | chr3_4:24350142-24350161 | None:intergenic | 45.0% | |
| CAACACCAACCCTAGAGTTA+GGG | + | chr3_4:24350160-24350179 | None:intergenic | 45.0% | |
| GTAATGGTGAGTGTGTGTCA+CGG | - | chr3_4:24350419-24350438 | Msa0495300:CDS | 45.0% | |
| TAATGGTGAGTGTGTGTCAC+GGG | - | chr3_4:24350420-24350439 | Msa0495300:CDS | 45.0% | |
| CAAGCTAGATAGCTAGCTAG+AGG | + | chr3_4:24350454-24350473 | None:intergenic | 45.0% | |
| GGGAGAGGAATAGGAACAAG+AGG | + | chr3_4:24346962-24346981 | None:intergenic | 50.0% | |
| ! | CTTGGACTAGGGAGAGGAAT+AGG | + | chr3_4:24346971-24346990 | None:intergenic | 50.0% |
| CTATTCCTCTCCCTAGTCCA+AGG | - | chr3_4:24346969-24346988 | Msa0495300:three_prime_UTR | 50.0% | |
| ! | TTAGTCCTTGGACTAGGGAG+AGG | + | chr3_4:24346977-24346996 | None:intergenic | 50.0% |
| GGGGTTTAGTCCTTGGACTA+GGG | + | chr3_4:24346982-24347001 | None:intergenic | 50.0% | |
| TGGGGTTTAGTCCTTGGACT+AGG | + | chr3_4:24346983-24347002 | None:intergenic | 50.0% | |
| !! | GGAGTGTTGAGCCATTGTCT+TGG | + | chr3_4:24347016-24347035 | None:intergenic | 50.0% |
| GGCTGAACACATGGATCACT+TGG | + | chr3_4:24347037-24347056 | None:intergenic | 50.0% | |
| TCAGCCCATGTTCCCCATTT+AGG | - | chr3_4:24347051-24347070 | Msa0495300:three_prime_UTR | 50.0% | |
| CAACCATCACAAGCAGTGCA+AGG | + | chr3_4:24347302-24347321 | None:intergenic | 50.0% | |
| TGCTGCTCCTGAATGCAAAC+AGG | - | chr3_4:24347376-24347395 | Msa0495300:CDS | 50.0% | |
| TACCCTTCCACGGCAAGTAA+AGG | + | chr3_4:24348565-24348584 | None:intergenic | 50.0% | |
| AGTCAACCCCACCCTACAAT+GGG | + | chr3_4:24348658-24348677 | None:intergenic | 50.0% | |
| AAGTCAACCCCACCCTACAA+TGG | + | chr3_4:24348659-24348678 | None:intergenic | 50.0% | |
| AGGCAAAGGTTCACGAGACT+TGG | - | chr3_4:24348734-24348753 | Msa0495300:intron | 50.0% | |
| CAGGTACCTAACCCTAGTTG+TGG | - | chr3_4:24349152-24349171 | Msa0495300:intron | 50.0% | |
| CTCACACCACAACTAGGGTT+AGG | + | chr3_4:24349161-24349180 | None:intergenic | 50.0% | |
| CATGAGCTCACACCACAACT+AGG | + | chr3_4:24349167-24349186 | None:intergenic | 50.0% | |
| CCGAATGTGTAGCTAGGAAC+TGG | + | chr3_4:24349266-24349285 | None:intergenic | 50.0% | |
| AGCCCAATAGACCTTGTGGT+GGG | + | chr3_4:24349319-24349338 | None:intergenic | 50.0% | |
| AAGCCCAATAGACCTTGTGG+TGG | + | chr3_4:24349320-24349339 | None:intergenic | 50.0% | |
| ACCACAAGGTCTATTGGGCT+TGG | - | chr3_4:24349319-24349338 | Msa0495300:intron | 50.0% | |
| CCACAAGGTCTATTGGGCTT+GGG | - | chr3_4:24349320-24349339 | Msa0495300:intron | 50.0% | |
| ACAAAAGTGACAACGGGCCT+CGG | + | chr3_4:24349346-24349365 | None:intergenic | 50.0% | |
| CGATATTCCTCCAGCTGCAT+TGG | - | chr3_4:24349565-24349584 | Msa0495300:intron | 50.0% | |
| TTAAACGCCAATGCAGCTGG+AGG | + | chr3_4:24349575-24349594 | None:intergenic | 50.0% | |
| GGATTAAACGCCAATGCAGC+TGG | + | chr3_4:24349578-24349597 | None:intergenic | 50.0% | |
| TTGGCGTTTAATCCGACCAC+TGG | - | chr3_4:24349584-24349603 | Msa0495300:intron | 50.0% | |
| TTTAATCCGACCACTGGAGC+CGG | - | chr3_4:24349590-24349609 | Msa0495300:intron | 50.0% | |
| GCCGGTACCATCTTTGATTC+AGG | - | chr3_4:24349608-24349627 | Msa0495300:intron | 50.0% | |
| ATGAGTTCCGGCGAAGAGTT+GGG | - | chr3_4:24349889-24349908 | Msa0495300:intron | 50.0% | |
| AGGGATGTCACTGTGAGCTT+TGG | + | chr3_4:24349915-24349934 | None:intergenic | 50.0% | |
| AAGCTCACAGTGACATCCCT+AGG | - | chr3_4:24349915-24349934 | Msa0495300:intron | 50.0% | |
| TCACAGTGACATCCCTAGGA+GGG | - | chr3_4:24349919-24349938 | Msa0495300:intron | 50.0% | |
| GCATGTGTCAAACCCTCCTA+GGG | + | chr3_4:24349934-24349953 | None:intergenic | 50.0% | |
| AGCATGTGTCAAACCCTCCT+AGG | + | chr3_4:24349935-24349954 | None:intergenic | 50.0% | |
| TGGCAATGTCACGTTCATGC+CGG | + | chr3_4:24350000-24350019 | None:intergenic | 50.0% | |
| !! | GATGTCCCTAACTCTAGGGT+TGG | - | chr3_4:24350152-24350171 | Msa0495300:CDS | 50.0% |
| GCAACACCAACCCTAGAGTT+AGG | + | chr3_4:24350161-24350180 | None:intergenic | 50.0% | |
| ! | TCGTGCAAGTTCACGGGTTA+TGG | - | chr3_4:24350530-24350549 | Msa0495300:CDS | 50.0% |
| ! | GGGAACATGGGCTGAACACA+TGG | + | chr3_4:24347046-24347065 | None:intergenic | 55.0% |
| AGCTATGTGCTCTCTGTGGC+AGG | - | chr3_4:24348714-24348733 | Msa0495300:intron | 55.0% | |
| AGGAACTGGGTCAGTGGCTA+AGG | + | chr3_4:24349252-24349271 | None:intergenic | 55.0% | |
| GTAGCTAGGAACTGGGTCAG+TGG | + | chr3_4:24349258-24349277 | None:intergenic | 55.0% | |
| TGCCCCACCACAAGGTCTAT+TGG | - | chr3_4:24349313-24349332 | Msa0495300:intron | 55.0% | |
| GCCCCACCACAAGGTCTATT+GGG | - | chr3_4:24349314-24349333 | Msa0495300:intron | 55.0% | |
| GCCCAATAGACCTTGTGGTG+GGG | + | chr3_4:24349318-24349337 | None:intergenic | 55.0% | |
| CCCAAGCCCAATAGACCTTG+TGG | + | chr3_4:24349323-24349342 | None:intergenic | 55.0% | |
| ATCCTCTTCGGCTGAGCAAC+AGG | + | chr3_4:24349458-24349477 | None:intergenic | 55.0% | |
| !! | AAAGATGGTACCGGCTCCAG+TGG | + | chr3_4:24349603-24349622 | None:intergenic | 55.0% |
| AGCCGAGTAAACACGGTACC+TGG | + | chr3_4:24349840-24349859 | None:intergenic | 55.0% | |
| GCTAGTTGCACCAGCCTATC+TGG | - | chr3_4:24349857-24349876 | Msa0495300:intron | 55.0% | |
| AGTTGCACCAGCCTATCTGG+CGG | - | chr3_4:24349860-24349879 | Msa0495300:intron | 55.0% | |
| CTCATCTCTGACCGCCAGAT+AGG | + | chr3_4:24349874-24349893 | None:intergenic | 55.0% | |
| TGGCGGTCAGAGATGAGTTC+CGG | - | chr3_4:24349877-24349896 | Msa0495300:intron | 55.0% | |
| GATGAGTTCCGGCGAAGAGT+TGG | - | chr3_4:24349888-24349907 | Msa0495300:intron | 55.0% | |
| CTCACAGTGACATCCCTAGG+AGG | - | chr3_4:24349918-24349937 | Msa0495300:intron | 55.0% | |
| GGACATCAATGAGCACACGG+TGG | + | chr3_4:24350139-24350158 | None:intergenic | 55.0% | |
| GTGCTCTCTGTGGCAGGCAA+AGG | - | chr3_4:24348720-24348739 | Msa0495300:intron | 60.0% | |
| ! | TAGACCTTGTGGTGGGGCAG+AGG | + | chr3_4:24349312-24349331 | None:intergenic | 60.0% |
| !! | ATGGTACCGGCTCCAGTGGT+CGG | + | chr3_4:24349599-24349618 | None:intergenic | 60.0% |
| TCTCTGACCGCCAGATAGGC+TGG | + | chr3_4:24349870-24349889 | None:intergenic | 60.0% | |
| GCTTTGGCCCAACTCTTCGC+CGG | + | chr3_4:24349899-24349918 | None:intergenic | 60.0% | |
| CAGCACCACGTGTTTGGCCA+TGG | - | chr3_4:24350052-24350071 | Msa0495300:intron | 60.0% | |
| CACCACGTGTTTGGCCATGG+CGG | - | chr3_4:24350055-24350074 | Msa0495300:intron | 60.0% | |
| CGAGTTCACGTTATCGGGCG+CGG | + | chr3_4:24350081-24350100 | None:intergenic | 60.0% | |
| CGCGCCCGATAACGTGAACT+CGG | - | chr3_4:24350079-24350098 | Msa0495300:intron | 60.0% | |
| GGTCTATTGGGCTTGGGCCG+AGG | - | chr3_4:24349326-24349345 | Msa0495300:intron | 65.0% | |
| GGCCTGTTGCTCAGCCGAAG+AGG | - | chr3_4:24349453-24349472 | Msa0495300:intron | 65.0% | |
| !! | CAAACACGTGGTGCTGCCGG+CGG | + | chr3_4:24350048-24350067 | None:intergenic | 65.0% |
| !! | GGCCAAACACGTGGTGCTGC+CGG | + | chr3_4:24350051-24350070 | None:intergenic | 65.0% |
| !! | TGGTGGGGCAGAGGTGCCTG+TGG | + | chr3_4:24349303-24349322 | None:intergenic | 70.0% |
| GGCACCTCTGCCCCACCACA+AGG | - | chr3_4:24349305-24349324 | Msa0495300:intron | 70.0% | |
| CGCCGGCAGCACCACGTGTT+TGG | - | chr3_4:24350046-24350065 | Msa0495300:intron | 70.0% | |
| GGCCGCCATGGCCAAACACG+TGG | + | chr3_4:24350060-24350079 | None:intergenic | 70.0% | |
| GTTATCGGGCGCGGCCGCCA+TGG | + | chr3_4:24350072-24350091 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 24346846 | 24350670 | 24346846 | ID=Msa0495300;Name=Msa0495300 |
| chr3_4 | mRNA | 24346846 | 24350670 | 24346846 | ID=Msa0495300-mRNA-1;Parent=Msa0495300;Name=Msa0495300-mRNA-1;_AED=0.01;_eAED=0.01;_QI=69|1|1|1|1|1|3|471|438 |
| chr3_4 | exon | 24346846 | 24347675 | 24346846 | ID=Msa0495300-mRNA-1:exon:5918;Parent=Msa0495300-mRNA-1 |
| chr3_4 | exon | 24347887 | 24348361 | 24347887 | ID=Msa0495300-mRNA-1:exon:5917;Parent=Msa0495300-mRNA-1 |
| chr3_4 | exon | 24350119 | 24350670 | 24350119 | ID=Msa0495300-mRNA-1:exon:5916;Parent=Msa0495300-mRNA-1 |
| chr3_4 | five_prime_UTR | 24350602 | 24350670 | 24350602 | ID=Msa0495300-mRNA-1:five_prime_utr;Parent=Msa0495300-mRNA-1 |
| chr3_4 | CDS | 24350119 | 24350601 | 24350119 | ID=Msa0495300-mRNA-1:cds;Parent=Msa0495300-mRNA-1 |
| chr3_4 | CDS | 24347887 | 24348361 | 24347887 | ID=Msa0495300-mRNA-1:cds;Parent=Msa0495300-mRNA-1 |
| chr3_4 | CDS | 24347317 | 24347675 | 24347317 | ID=Msa0495300-mRNA-1:cds;Parent=Msa0495300-mRNA-1 |
| chr3_4 | three_prime_UTR | 24346846 | 24347316 | 24346846 | ID=Msa0495300-mRNA-1:three_prime_utr;Parent=Msa0495300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
