AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1064250

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1064250 MtrunA17_Chr7g0245231 98.830 171 2 0 1 171 1 171 1.66e-123 344
Msa1064250 MtrunA17_Chr6g0450921 92.308 169 13 0 3 171 2 170 6.20e-114 320
Msa1064250 MtrunA17_Chr3g0093271 41.463 164 96 0 1 164 34 197 3.78e-39 132
Msa1064250 MtrunA17_Chr3g0093271 46.970 66 35 0 29 94 135 200 5.91e-12 61.2
Msa1064250 MtrunA17_Chr5g0440931 44.755 143 79 0 22 164 4 146 7.83e-39 129
Msa1064250 MtrunA17_Chr5g0440931 46.970 66 35 0 29 94 84 149 2.66e-12 61.2
Msa1064250 MtrunA17_Chr6g0460211 44.755 143 79 0 22 164 4 146 1.85e-38 128
Msa1064250 MtrunA17_Chr6g0460211 46.970 66 35 0 29 94 84 149 2.80e-12 61.2
Msa1064250 MtrunA17_Chr1g0188171 43.151 146 83 0 21 166 3 148 2.03e-38 128
Msa1064250 MtrunA17_Chr7g0254731 44.056 143 80 0 22 164 4 146 5.08e-38 127
Msa1064250 MtrunA17_Chr7g0254731 48.485 66 34 0 29 94 84 149 5.52e-13 63.2
Msa1064250 MtrunA17_Chr1g0166281 44.521 146 81 0 23 168 5 150 3.83e-37 125
Msa1064250 MtrunA17_Chr1g0185001 38.776 147 87 2 21 165 3 148 4.51e-28 102
Msa1064250 MtrunA17_Chr1g0185001 41.667 72 38 1 20 91 78 145 6.06e-11 57.8
Msa1064250 MtrunA17_Chr1g0161211 37.410 139 87 0 26 164 42 180 5.07e-23 90.5
Msa1064250 MtrunA17_Chr7g0267751 34.965 143 90 2 22 164 432 571 2.48e-22 92.8
Msa1064250 MtrunA17_Chr7g0274101 36.986 146 92 0 22 167 4 149 4.75e-22 86.7
Msa1064250 MtrunA17_Chr1g0176751 35.417 144 90 2 22 165 421 561 9.81e-22 91.3
Msa1064250 MtrunA17_Chr8g0391691 35.915 142 90 1 30 171 36 176 1.02e-21 87.0
Msa1064250 MtrunA17_Chr8g0391691 49.153 59 30 0 29 87 108 166 2.61e-13 64.7
Msa1064250 MtrunA17_Chr4g0033601 32.394 142 94 1 30 169 5 146 2.82e-21 84.7
Msa1064250 MtrunA17_Chr3g0111371 36.429 140 85 2 28 167 3 138 5.78e-21 83.6
Msa1064250 MtrunA17_Chr3g0111371 38.961 77 47 0 16 92 60 136 2.36e-12 61.2
Msa1064250 MtrunA17_Chr8g0385341 36.620 142 87 2 23 164 328 466 1.09e-20 88.2
Msa1064250 MtrunA17_Chr7g0245911 36.986 146 83 4 30 166 47 192 1.59e-20 84.0
Msa1064250 MtrunA17_Chr8g0392951 34.559 136 88 1 30 165 24 158 1.77e-20 83.2
Msa1064250 MtrunA17_Chr5g0434951 34.815 135 87 1 30 164 4 137 3.87e-20 81.6
Msa1064250 MtrunA17_Chr3g0131181 35.915 142 88 2 23 164 327 465 4.08e-20 86.3
Msa1064250 MtrunA17_Chr8g0366401 29.114 158 109 1 15 169 2 159 6.43e-20 81.6
Msa1064250 MtrunA17_Chr8g0351681 36.364 143 83 3 30 164 49 191 9.12e-20 82.0
Msa1064250 MtrunA17_Chr5g0444171 36.913 149 84 4 22 166 389 531 1.12e-19 85.1
Msa1064250 MtrunA17_Chr5g0397101 33.803 142 92 2 23 164 364 503 2.87e-19 84.0
Msa1064250 MtrunA17_Chr8g0387671 34.266 143 92 2 22 164 363 503 3.59e-19 83.6
Msa1064250 MtrunA17_Chr5g0398751 29.577 142 98 1 23 164 5 144 1.60e-18 77.4
Msa1064250 MtrunA17_Chr1g0200601 32.394 142 93 2 23 164 328 466 2.03e-18 81.6
Msa1064250 MtrunA17_Chr5g0448721 32.394 142 93 2 23 164 394 532 4.97e-18 80.5
Msa1064250 MtrunA17_Chr1g0170281 33.099 142 92 2 23 164 416 554 8.70e-18 79.7
Msa1064250 MtrunA17_Chr4g0062221 30.657 137 93 2 30 164 11 147 9.64e-18 75.9
Msa1064250 MtrunA17_Chr0c02g0489761 34.266 143 90 3 23 164 376 515 1.09e-17 79.3
Msa1064250 MtrunA17_Chr5g0441691 32.867 143 92 3 23 164 366 505 1.99e-17 78.6
Msa1064250 MtrunA17_Chr1g0169581 31.387 137 92 1 30 164 4 140 3.12e-17 73.9
Msa1064250 MtrunA17_Chr1g0169581 39.394 66 40 0 27 92 76 141 1.10e-11 59.3
Msa1064250 MtrunA17_Chr4g0044961 31.013 158 106 2 14 171 41 195 3.38e-17 75.1
Msa1064250 MtrunA17_Chr4g0059951 33.113 151 97 4 22 170 370 518 4.86e-17 77.8
Msa1064250 MtrunA17_Chr4g0074811 33.562 146 93 3 22 166 388 530 5.26e-17 77.4
Msa1064250 MtrunA17_Chr7g0256701 31.081 148 97 3 23 165 66 213 2.76e-16 73.2
Msa1064250 MtrunA17_Chr1g0157131 33.103 145 91 3 22 164 371 511 3.94e-16 75.1
Msa1064250 MtrunA17_Chr8g0373691 31.690 142 95 2 24 164 47 187 4.69e-16 72.0
Msa1064250 MtrunA17_Chr7g0256171 31.690 142 95 1 30 169 5 146 1.38e-15 70.1
Msa1064250 MtrunA17_Chr5g0402331 34.028 144 90 4 25 165 43 184 1.92e-15 70.5
Msa1064250 MtrunA17_Chr8g0368681 26.573 143 103 1 24 164 6 148 2.02e-15 69.7
Msa1064250 MtrunA17_Chr3g0098951 33.548 155 88 5 22 166 380 529 5.96e-15 71.6
Msa1064250 MtrunA17_Chr5g0402361 34.028 144 90 4 25 165 215 356 1.30e-14 70.1
Msa1064250 MtrunA17_Chr5g0402361 29.651 172 93 2 27 170 117 288 1.42e-14 70.1
Msa1064250 MtrunA17_Chr5g0402361 33.099 142 93 2 25 165 43 183 1.90e-14 69.7
Msa1064250 MtrunA17_Chr7g0242561 30.201 149 102 2 23 170 354 501 1.49e-14 70.5
Msa1064250 MtrunA17_Chr7g0245371 29.333 150 92 3 31 167 25 173 1.58e-14 67.8
Msa1064250 MtrunA17_Chr6g0482731 43.077 65 37 0 31 95 100 164 4.94e-14 66.2
Msa1064250 MtrunA17_Chr6g0482731 29.932 147 93 3 30 171 26 167 5.61e-12 60.8
Msa1064250 MtrunA17_Chr2g0329371 29.167 144 98 2 30 169 64 207 1.44e-13 65.9
Msa1064250 MtrunA17_Chr3g0116151 31.250 128 87 1 38 165 14 140 4.59e-13 63.2
Msa1064250 MtrunA17_Chr3g0116141 31.250 128 87 1 38 165 13 139 4.64e-13 63.2
Msa1064250 MtrunA17_Chr7g0225921 29.496 139 96 2 27 164 3 140 4.78e-13 63.2
Msa1064250 MtrunA17_Chr3g0100541 30.137 146 87 1 23 168 45 175 7.15e-13 63.5
Msa1064250 MtrunA17_Chr4g0057651 29.286 140 98 1 26 165 2 140 1.12e-12 62.0
Msa1064250 MtrunA17_Chr3g0100511 29.787 141 84 1 23 163 45 170 3.22e-12 61.6
Msa1064250 MtrunA17_Chr3g0121191 41.176 68 40 0 24 91 150 217 4.87e-12 62.0
Msa1064250 MtrunA17_Chr4g0064231 28.750 160 94 4 28 168 62 220 4.95e-12 62.0
Msa1064250 MtrunA17_Chr4g0057641 29.630 135 94 1 30 164 6 139 1.18e-11 59.3
Msa1064250 MtrunA17_Chr6g0459231 29.771 131 91 1 34 164 12 141 1.31e-11 59.3
Msa1064250 MtrunA17_Chr4g0074791 33.577 137 77 4 31 166 401 524 1.35e-11 62.0
Msa1064250 MtrunA17_Chr4g0057661 29.412 136 95 1 30 165 6 140 2.40e-11 58.5
Msa1064250 MtrunA17_Chr1g0176421 27.692 130 91 2 22 151 458 584 3.91e-11 60.5
Msa1064250 MtrunA17_Chr1g0173541 28.477 151 104 4 22 170 349 497 5.60e-11 60.1
Msa1064250 MtrunA17_Chr3g0100561 30.216 139 82 1 23 161 45 168 5.84e-11 58.2
Msa1064250 MtrunA17_Chr1g0169621 38.806 67 41 0 27 93 101 167 9.97e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1064250 AT3G50360.1 75.449 167 39 1 3 169 2 166 3.29e-82 240
Msa1064250 AT4G37010.2 63.871 155 55 1 16 169 16 170 2.06e-65 198
Msa1064250 AT4G37010.1 63.871 155 55 1 16 169 12 166 2.46e-65 197
Msa1064250 AT1G66410.1 44.755 143 79 0 22 164 4 146 3.37e-39 130
Msa1064250 AT1G66410.1 48.485 66 34 0 29 94 84 149 1.03e-12 62.8
Msa1064250 AT5G37780.1 44.755 143 79 0 22 164 4 146 3.37e-39 130
Msa1064250 AT5G37780.1 48.485 66 34 0 29 94 84 149 1.03e-12 62.8
Msa1064250 AT3G56800.1 44.755 143 79 0 22 164 4 146 1.50e-38 129
Msa1064250 AT3G56800.1 46.970 66 35 0 29 94 84 149 2.79e-12 61.6
Msa1064250 AT2G41110.1 44.755 143 79 0 22 164 4 146 1.50e-38 129
Msa1064250 AT2G41110.1 46.970 66 35 0 29 94 84 149 2.79e-12 61.6
Msa1064250 AT2G27030.1 44.755 143 79 0 22 164 4 146 1.50e-38 129
Msa1064250 AT2G27030.1 46.970 66 35 0 29 94 84 149 2.79e-12 61.6
Msa1064250 AT2G27030.3 44.755 143 79 0 22 164 4 146 2.06e-38 130
Msa1064250 AT2G27030.3 46.970 66 35 0 29 94 84 149 1.94e-12 62.8
Msa1064250 AT3G43810.1 44.755 143 79 0 22 164 4 146 2.55e-38 128
Msa1064250 AT3G43810.1 46.970 66 35 0 29 94 84 149 3.86e-12 61.2
Msa1064250 AT3G43810.2 45.070 142 78 0 23 164 5 146 5.92e-38 129
Msa1064250 AT3G43810.2 46.154 65 35 0 29 93 84 148 1.57e-11 60.8
Msa1064250 AT5G21274.1 44.056 143 80 0 22 164 4 146 8.44e-38 127
Msa1064250 AT5G21274.1 45.455 66 36 0 29 94 84 149 1.22e-11 59.7
Msa1064250 AT3G22930.1 42.857 147 84 0 22 168 27 173 9.10e-37 125
Msa1064250 AT5G37780.2 40.506 158 79 1 22 164 4 161 2.32e-35 121
Msa1064250 AT5G37780.2 48.485 66 34 0 29 94 99 164 1.37e-12 62.8
Msa1064250 AT2G41110.2 41.290 155 79 1 22 164 4 158 7.17e-35 120
Msa1064250 AT2G41110.2 46.970 66 35 0 29 94 96 161 3.48e-12 61.6
Msa1064250 AT4G14640.1 41.549 142 83 0 23 164 6 147 2.41e-34 118
Msa1064250 AT5G37780.3 37.870 169 79 1 22 164 4 172 1.83e-33 117
Msa1064250 AT5G37780.3 48.485 66 34 0 29 94 110 175 1.48e-12 62.8
Msa1064250 AT1G66410.2 41.830 153 79 1 22 164 4 156 2.82e-33 116
Msa1064250 AT1G66410.2 48.485 66 34 0 29 94 94 159 1.07e-12 62.8
Msa1064250 AT5G37780.4 42.623 122 70 0 43 164 12 133 9.63e-31 108
Msa1064250 AT5G37780.4 48.485 66 34 0 29 94 71 136 6.95e-13 62.8
Msa1064250 AT1G66410.4 42.727 110 63 0 55 164 1 110 3.37e-27 99.4
Msa1064250 AT1G66410.4 48.485 66 34 0 29 94 48 113 3.21e-13 63.2
Msa1064250 AT1G66410.3 42.727 110 63 0 55 164 1 110 3.37e-27 99.4
Msa1064250 AT1G66410.3 48.485 66 34 0 29 94 48 113 3.21e-13 63.2
Msa1064250 AT3G43810.4 42.727 110 63 0 55 164 1 110 1.06e-26 97.8
Msa1064250 AT3G43810.4 46.970 66 35 0 29 94 48 113 1.18e-12 61.6
Msa1064250 AT3G43810.3 42.727 110 63 0 55 164 1 110 1.06e-26 97.8
Msa1064250 AT3G43810.3 46.970 66 35 0 29 94 48 113 1.18e-12 61.6
Msa1064250 AT1G24620.1 35.185 162 99 2 9 170 21 176 1.83e-26 99.4
Msa1064250 AT4G14640.2 38.843 121 74 0 44 164 9 129 2.46e-26 97.4
Msa1064250 AT4G14640.2 50.794 63 31 0 29 91 67 129 3.47e-14 66.2
Msa1064250 AT3G22930.2 44.762 105 58 0 22 126 27 131 3.87e-26 97.1
Msa1064250 AT4G14640.3 42.718 103 59 0 23 125 6 108 1.43e-23 90.1
Msa1064250 AT5G23580.1 37.324 142 86 2 23 164 320 458 2.27e-22 93.2
Msa1064250 AT3G51920.1 34.014 147 97 0 23 169 5 151 5.68e-22 87.0
Msa1064250 AT2G41100.7 32.704 159 90 2 23 164 59 217 8.09e-22 89.7
Msa1064250 AT2G41100.7 33.654 104 66 1 10 113 136 236 1.62e-12 64.3
Msa1064250 AT2G41100.7 27.778 126 75 2 55 164 2 127 8.23e-11 59.7
Msa1064250 AT2G41100.6 32.704 159 90 2 23 164 59 217 8.09e-22 89.7
Msa1064250 AT2G41100.6 33.654 104 66 1 10 113 136 236 1.62e-12 64.3
Msa1064250 AT2G41100.6 27.778 126 75 2 55 164 2 127 8.23e-11 59.7
Msa1064250 AT2G41100.3 32.704 159 90 2 23 164 59 217 8.09e-22 89.7
Msa1064250 AT2G41100.3 33.654 104 66 1 10 113 136 236 1.62e-12 64.3
Msa1064250 AT2G41100.3 27.778 126 75 2 55 164 2 127 8.23e-11 59.7
Msa1064250 AT2G41090.1 33.333 144 93 1 21 164 3 143 1.13e-21 87.0
Msa1064250 AT2G41100.4 32.704 159 90 2 23 164 94 252 1.40e-21 89.7
Msa1064250 AT2G41100.4 31.013 158 93 2 23 164 5 162 1.25e-19 84.3
Msa1064250 AT2G41100.4 33.654 104 66 1 10 113 171 271 2.23e-12 64.3
Msa1064250 AT2G41100.1 32.704 159 90 2 23 164 94 252 1.40e-21 89.7
Msa1064250 AT2G41100.1 31.013 158 93 2 23 164 5 162 1.25e-19 84.3
Msa1064250 AT2G41100.1 33.654 104 66 1 10 113 171 271 2.23e-12 64.3
Msa1064250 AT2G43290.1 34.459 148 90 3 29 169 64 211 1.99e-21 87.0
Msa1064250 AT1G05990.1 35.664 143 89 2 30 169 5 147 3.14e-21 85.1
Msa1064250 AT1G12310.1 31.507 146 98 1 19 164 2 145 1.12e-20 83.6
Msa1064250 AT5G19360.1 35.915 142 89 2 23 164 366 505 1.15e-20 88.2
Msa1064250 AT1G18530.1 33.333 141 91 2 26 164 4 143 2.02e-20 83.2
Msa1064250 AT3G25600.1 32.609 138 91 1 29 164 11 148 3.30e-20 82.8
Msa1064250 AT5G12180.1 35.211 142 90 2 23 164 371 510 3.93e-20 87.0
Msa1064250 AT1G18210.2 33.824 136 86 1 29 164 22 153 4.73e-20 82.4
Msa1064250 AT1G18210.2 39.130 69 42 0 24 92 86 154 3.71e-11 58.9
Msa1064250 AT1G18210.1 33.824 136 86 1 29 164 22 153 4.73e-20 82.4
Msa1064250 AT1G18210.1 39.130 69 42 0 24 92 86 154 3.71e-11 58.9
Msa1064250 AT1G62820.1 31.034 145 98 1 20 164 3 145 7.59e-20 81.3
Msa1064250 AT2G36180.1 38.732 142 84 2 33 171 3 144 9.69e-20 80.9
Msa1064250 AT1G32250.1 30.065 153 101 1 23 169 9 161 1.16e-19 81.3
Msa1064250 AT4G09570.1 34.507 142 90 2 23 164 323 461 1.24e-19 85.5
Msa1064250 AT1G66400.1 33.099 142 93 1 29 168 14 155 2.80e-19 80.1
Msa1064250 AT1G35670.1 33.803 142 91 2 23 164 324 462 5.10e-19 83.6
Msa1064250 AT3G20410.2 36.429 140 83 3 29 166 395 530 1.27e-18 82.4
Msa1064250 AT3G20410.1 36.429 140 83 3 29 166 395 530 1.27e-18 82.4
Msa1064250 AT2G15680.1 31.361 169 107 2 5 166 18 184 1.30e-18 79.0
Msa1064250 AT1G73630.1 29.605 152 103 1 15 166 5 152 1.58e-18 78.2
Msa1064250 AT5G37770.1 32.867 143 92 1 30 168 17 159 1.85e-18 78.2
Msa1064250 AT5G37770.2 32.867 143 92 1 30 168 17 159 1.85e-18 78.2
Msa1064250 AT3G59440.1 30.556 144 97 2 30 171 51 193 2.82e-18 78.6
Msa1064250 AT1G76040.2 37.241 145 85 4 22 164 408 548 5.25e-18 80.9
Msa1064250 AT1G76040.1 37.241 145 85 4 22 164 170 310 5.66e-18 79.7
Msa1064250 AT1G76040.4 37.241 145 85 4 22 164 170 310 5.66e-18 79.7
Msa1064250 AT1G61950.1 33.987 153 95 3 21 171 395 543 8.21e-18 80.1
Msa1064250 AT2G17290.1 33.099 142 92 2 23 164 383 521 1.64e-17 79.3
Msa1064250 AT2G17290.2 33.099 142 92 2 23 164 383 521 1.64e-17 79.3
Msa1064250 AT4G21940.2 34.247 146 90 3 23 166 399 540 1.67e-17 79.3
Msa1064250 AT4G21940.1 34.247 146 90 3 23 166 399 540 1.88e-17 79.3
Msa1064250 AT4G04720.2 33.333 144 94 2 23 166 377 518 2.21e-17 79.0
Msa1064250 AT4G04720.1 33.333 144 94 2 23 166 377 518 2.21e-17 79.0
Msa1064250 AT1G50700.1 35.000 140 85 3 29 166 377 512 2.76e-17 78.6
Msa1064250 AT2G38910.1 31.293 147 98 2 23 169 432 575 3.00e-17 78.6
Msa1064250 AT4G38230.4 32.394 142 93 2 23 164 322 460 5.40e-17 77.8
Msa1064250 AT4G38230.3 32.394 142 93 2 23 164 322 460 5.40e-17 77.8
Msa1064250 AT4G38230.2 32.394 142 93 2 23 164 352 490 5.50e-17 77.8
Msa1064250 AT4G38230.1 32.394 142 93 2 23 164 178 316 7.02e-17 77.0
Msa1064250 AT4G35310.2 32.394 142 93 2 23 164 395 533 9.68e-17 77.0
Msa1064250 AT4G35310.1 32.394 142 93 2 23 164 395 533 9.68e-17 77.0
Msa1064250 AT4G04710.2 34.965 143 89 3 23 164 330 469 1.07e-16 77.0
Msa1064250 AT4G04710.3 34.965 143 89 3 23 164 316 455 1.44e-16 76.6
Msa1064250 AT4G04710.1 34.965 143 89 3 23 164 343 482 1.51e-16 76.6
Msa1064250 AT5G04870.1 31.690 142 94 2 23 164 448 586 2.64e-16 75.9
Msa1064250 AT4G12860.1 30.556 144 98 1 28 169 3 146 4.62e-16 71.6
Msa1064250 AT4G23650.1 30.769 143 97 2 22 164 375 515 9.33e-16 74.3
Msa1064250 AT3G10660.2 30.986 142 95 2 23 164 484 622 9.60e-16 74.3
Msa1064250 AT3G10660.1 30.986 142 95 2 23 164 484 622 9.60e-16 74.3
Msa1064250 AT4G03290.1 30.714 140 92 2 30 164 5 144 1.44e-15 70.5
Msa1064250 AT3G07490.1 30.986 142 96 1 30 169 5 146 1.51e-15 70.1
Msa1064250 AT5G17470.1 36.232 138 86 2 31 166 3 140 1.67e-15 70.1
Msa1064250 AT4G04740.4 32.192 146 93 3 23 166 366 507 1.79e-15 73.6
Msa1064250 AT4G04740.6 32.192 146 93 3 23 166 366 507 1.79e-15 73.6
Msa1064250 AT4G04740.5 32.192 146 93 3 23 166 366 507 1.79e-15 73.6
Msa1064250 AT4G04740.3 32.192 146 93 3 23 166 366 507 1.79e-15 73.6
Msa1064250 AT4G04740.1 32.192 146 93 3 23 166 366 507 1.79e-15 73.6
Msa1064250 AT4G04740.7 32.192 146 93 3 23 166 366 507 1.79e-15 73.6
Msa1064250 AT4G04710.4 35.172 145 88 4 23 164 343 484 1.87e-15 73.6
Msa1064250 AT4G04700.1 32.414 145 96 2 22 166 328 470 2.76e-15 72.8
Msa1064250 AT5G42380.1 28.676 136 96 1 30 164 49 184 8.30e-15 68.9
Msa1064250 AT4G04695.1 31.034 145 98 2 22 166 328 470 2.02e-14 70.5
Msa1064250 AT3G03000.1 27.027 148 107 1 23 169 13 160 1.18e-13 65.5
Msa1064250 AT3G50770.1 29.762 168 111 3 2 164 38 203 1.64e-13 65.9
Msa1064250 AT3G57530.1 29.412 153 99 6 22 170 360 507 3.75e-13 66.6
Msa1064250 AT3G51850.1 30.201 149 102 2 23 170 352 499 3.84e-13 66.6
Msa1064250 AT1G74740.1 28.477 151 104 4 22 170 356 504 4.06e-13 66.6
Msa1064250 AT1G50700.2 29.518 166 85 4 29 166 377 538 4.83e-13 66.6
Msa1064250 AT2G41100.2 29.921 127 72 2 55 164 1 127 4.90e-13 64.7
Msa1064250 AT2G41100.2 33.654 104 66 1 10 113 46 146 6.68e-13 64.3
Msa1064250 AT3G10190.1 32.609 138 90 3 30 165 70 206 4.92e-13 64.7
Msa1064250 AT5G12480.2 27.815 151 106 3 22 170 262 411 5.48e-13 66.2
Msa1064250 AT5G12480.1 27.815 151 106 3 22 170 356 505 5.82e-13 66.2
Msa1064250 AT2G41100.5 36.264 91 55 1 23 113 5 92 5.88e-13 63.2
Msa1064250 AT2G41410.1 31.159 138 92 3 30 164 70 207 4.37e-12 62.4
Msa1064250 AT4G04740.2 31.298 131 84 3 23 151 366 492 4.74e-12 63.5
Msa1064250 AT3G03400.1 31.452 124 83 1 31 152 6 129 4.90e-12 60.5
Msa1064250 AT1G76640.1 27.083 144 103 1 23 164 15 158 5.70e-12 60.8
Msa1064250 AT2G41860.2 28.289 152 103 4 22 170 351 499 1.01e-11 62.8
Msa1064250 AT2G41860.1 28.289 152 103 4 22 170 351 499 1.13e-11 62.4
Msa1064250 AT1G18890.1 29.605 152 101 5 22 170 360 508 3.14e-11 61.2

Find 59 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAATTCACGATTTGGAAAT+TGG 0.146463 7_2:-56761727 None:intergenic
TTGTTTGTTGTTGAATCTTC+TGG 0.148468 7_2:-56761949 None:intergenic
AGTGTCTCTTTCTCCTATTT+TGG 0.237506 7_2:-56762829 None:intergenic
TTACAACTTACAAGTATAAA+TGG 0.283259 7_2:-56765468 None:intergenic
CAGTCATCTTCTATACTTAG+AGG 0.308294 7_2:+56761921 Msa1064250:intron
TTTGTGGAAACTTACTATTT+TGG 0.351393 7_2:-56763082 None:intergenic
CTACTGTTCCCAGTTGCATT+TGG 0.359674 7_2:-56765358 None:intergenic
TGTGTTATTGTGCAAATTGT+AGG 0.363040 7_2:+56765229 Msa1064250:three_prime_UTR
TGGCTTGATTACATATATAT+TGG 0.369271 7_2:+56765193 Msa1064250:three_prime_UTR
TAGGGCAGCAATTCACGATT+TGG 0.370079 7_2:-56761734 None:intergenic
TCTTATCTTTGTAGGGCCCT+TGG 0.375272 7_2:+56762256 Msa1064250:intron
CACATGATGACGGCCAAAAT+AGG 0.383388 7_2:+56762816 Msa1064250:CDS
CATAAGTGTGTTACTTGCTC+TGG 0.399184 7_2:-56765551 None:intergenic
CTGAATTTAGATGTTCTGTT+TGG 0.402632 7_2:+56765334 Msa1064250:three_prime_UTR
CTGTTTGGACCAAATGCAAC+TGG 0.409973 7_2:+56765349 Msa1064250:three_prime_UTR
TGTAACAACTTAATGCTTGT+CGG 0.416612 7_2:+56765486 Msa1064250:three_prime_UTR
CTACATCGAGTAGTTAGCTT+TGG 0.418501 7_2:+56765169 Msa1064250:three_prime_UTR
CTGGAATGGTTGTCGGAGTT+GGG 0.423966 7_2:-56765532 None:intergenic
GATCGTACCATTGTGGAACT+AGG 0.432318 7_2:-56761753 None:intergenic
ATCGAGTAGTTAGCTTTGGC+TGG 0.442867 7_2:+56765173 Msa1064250:three_prime_UTR
ATTCAATAACAACTTGTGAT+AGG 0.443710 7_2:+56765509 Msa1064250:three_prime_UTR
TGTATCTTATCTCCGATCAT+AGG 0.444892 7_2:+56765432 Msa1064250:three_prime_UTR
TCTGGAATGGTTGTCGGAGT+TGG 0.454925 7_2:-56765533 None:intergenic
ATCATCATGATGAACTCCTC+TGG 0.458576 7_2:-56765115 None:intergenic
AAATGATAGCAGATGTCGAC+AGG 0.463318 7_2:+56762757 Msa1064250:CDS
ACTTGCTCTGGAATGGTTGT+CGG 0.466816 7_2:-56765539 None:intergenic
ATCATGATGATGAACACAAC+AGG 0.494636 7_2:+56765127 Msa1064250:CDS
TTATTCGACACTGATGGCTC+AGG 0.496240 7_2:+56762029 Msa1064250:CDS
TGTATTGTAGGGTAAGATAT+CGG 0.507847 7_2:+56762977 Msa1064250:intron
CATAGCAACATTAAGCTCCT+TGG 0.513823 7_2:-56762156 None:intergenic
GTAGCACAAAACTTAGATGT+TGG 0.514578 7_2:-56761657 None:intergenic
TTTAGGTACTATTGATGCCA+AGG 0.521565 7_2:+56762139 Msa1064250:intron
TGATAGAGAGATTCAGGAGA+TGG 0.522125 7_2:+56763046 Msa1064250:CDS
GTGTGTTACTTGCTCTGGAA+TGG 0.524313 7_2:-56765546 None:intergenic
TTTGAATTATTCGACACTGA+TGG 0.531996 7_2:+56762023 Msa1064250:CDS
CTTCAGTCATCTCAAATCCA+AGG 0.540688 7_2:-56762273 None:intergenic
TAGCAGATGTCGACAGGGAT+GGG 0.548013 7_2:+56762763 Msa1064250:CDS
TATTTATTTGACAAAATCGA+AGG 0.553316 7_2:+56761680 Msa1064250:five_prime_UTR
GACAATGTTTCTCCTATGAT+CGG 0.560921 7_2:-56765444 None:intergenic
ATCGTACCATTGTGGAACTA+GGG 0.567201 7_2:-56761752 None:intergenic
AAGCGGATTGCAAAAGAGCT+AGG 0.569005 7_2:+56763011 Msa1064250:CDS
AGGAGAAAGAGACACTAAAG+AGG 0.570607 7_2:+56762836 Msa1064250:CDS
ATAGCAGATGTCGACAGGGA+TGG 0.573080 7_2:+56762762 Msa1064250:CDS
GATGTCGACAGGGATGGGAG+TGG 0.578755 7_2:+56762768 Msa1064250:CDS
TTCAGTCATCTCAAATCCAA+GGG 0.589829 7_2:-56762272 None:intergenic
TGATCGAGAGGTTGATCCAG+AGG 0.590124 7_2:+56765099 Msa1064250:CDS
TGTTTGGACCAAATGCAACT+GGG 0.605766 7_2:+56765350 Msa1064250:three_prime_UTR
TGGATTTGAGATGACTGAAG+AGG 0.608260 7_2:+56762276 Msa1064250:CDS
AGGAGCTTAATGTTGCTATG+AGG 0.614526 7_2:+56762159 Msa1064250:CDS
GTAGGGTAAGATATCGGCAT+CGG 0.618796 7_2:+56762983 Msa1064250:intron
GCAGAGAGATCGTACCATTG+TGG 0.624689 7_2:-56761760 None:intergenic
AGATTCAACAACAAACAAAG+AGG 0.630713 7_2:+56761954 Msa1064250:CDS
AGACATACATCAATGCTCAC+AGG 0.630972 7_2:-56765313 None:intergenic
ATAATATGCAGATGATCGAG+AGG 0.639575 7_2:+56765087 Msa1064250:intron
GATGTAGATATGACTAGTGA+CGG 0.656087 7_2:-56765153 None:intergenic
TGAATTTGAGCACATGATGA+CGG 0.665935 7_2:+56762806 Msa1064250:CDS
TATCGGCATCGGATATCAAG+CGG 0.676928 7_2:+56762994 Msa1064250:CDS
TTGCTGCCCTAGTTCCACAA+TGG 0.686939 7_2:+56761746 Msa1064250:exon
AATGATAGCAGATGTCGACA+GGG 0.695960 7_2:+56762758 Msa1064250:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATGTTTTTCATAATAAT+TGG + chr7_2:56762204-56762223 Msa1064250:intron 10.0%
!!! AAATGTTTTTCATAATAATT+GGG + chr7_2:56762205-56762224 Msa1064250:intron 10.0%
!!! AAACTAATATATTTTAACAA+TGG - chr7_2:56763703-56763722 None:intergenic 10.0%
!! ATTAATCTTCTTTATTAATT+AGG + chr7_2:56763862-56763881 Msa1064250:intron 10.0%
!! TTAATCTTCTTTATTAATTA+GGG + chr7_2:56763863-56763882 Msa1064250:intron 10.0%
!!! TTTTTCAATAAATGTTTTAT+GGG - chr7_2:56764883-56764902 None:intergenic 10.0%
!!! ATTTTTCAATAAATGTTTTA+TGG - chr7_2:56764884-56764903 None:intergenic 10.0%
!!! TACTTTGTTTAATGATTTTT+AGG + chr7_2:56762122-56762141 Msa1064250:intron 15.0%
!! ATAAGAAATAATAGTATCAT+TGG + chr7_2:56763226-56763245 Msa1064250:intron 15.0%
!! TAAAAAGTAAACATAATGAT+TGG + chr7_2:56763442-56763461 Msa1064250:intron 15.0%
!! ATATATATATATAATCCCTA+AGG + chr7_2:56763733-56763752 Msa1064250:intron 15.0%
!! TAATCTTCTTTATTAATTAG+GGG + chr7_2:56763864-56763883 Msa1064250:intron 15.0%
!! TTTACTATATCATATTATGT+GGG - chr7_2:56763929-56763948 None:intergenic 15.0%
!!! TTTTACTATATCATATTATG+TGG - chr7_2:56763930-56763949 None:intergenic 15.0%
!!! TTTTAACTTTGTTTTTTATG+GGG - chr7_2:56764424-56764443 None:intergenic 15.0%
!!! CTTTTAACTTTGTTTTTTAT+GGG - chr7_2:56764425-56764444 None:intergenic 15.0%
!! AATAGATTAAAGTATAGAAT+AGG + chr7_2:56764462-56764481 Msa1064250:intron 15.0%
!! TATTTATTTGACAAAATCGA+AGG + chr7_2:56761680-56761699 Msa1064250:five_prime_UTR 20.0%
!!! CATTAAACAAAGTATTAGTA+TGG - chr7_2:56762116-56762135 None:intergenic 20.0%
!! ATCTTATTCTTATCTTTGTA+GGG + chr7_2:56762249-56762268 Msa1064250:intron 20.0%
!! GGTAATTAATGTTTATGTTT+GGG + chr7_2:56762350-56762369 Msa1064250:intron 20.0%
!! TCTTATACTAATTTAGAGAT+AGG + chr7_2:56762589-56762608 Msa1064250:intron 20.0%
!! CTTATACTAATTTAGAGATA+GGG + chr7_2:56762590-56762609 Msa1064250:intron 20.0%
!!! TTTTGTCTTGATCAATAATA+TGG - chr7_2:56762878-56762897 None:intergenic 20.0%
!!! TAAAAATTTTACATCTCACA+TGG + chr7_2:56763133-56763152 Msa1064250:intron 20.0%
!!! TATGATTCATTTTTATTGTC+AGG - chr7_2:56763417-56763436 None:intergenic 20.0%
!!! ATTTTAATTAGAGTACCTTA+AGG + chr7_2:56763531-56763550 Msa1064250:intron 20.0%
!! TTACTATATCATATTATGTG+GGG - chr7_2:56763928-56763947 None:intergenic 20.0%
!!! CCTTTTAACTTTGTTTTTTA+TGG - chr7_2:56764426-56764445 None:intergenic 20.0%
!! CCATAAAAAACAAAGTTAAA+AGG + chr7_2:56764423-56764442 Msa1064250:intron 20.0%
!! TGGTTTCATAAAAATTCTTA+AGG + chr7_2:56764944-56764963 Msa1064250:intron 20.0%
!! GGTTTCATAAAAATTCTTAA+GGG + chr7_2:56764945-56764964 Msa1064250:intron 20.0%
!! GTTTCATAAAAATTCTTAAG+GGG + chr7_2:56764946-56764965 Msa1064250:intron 20.0%
!! AAATAATATCTCACAAACAT+GGG - chr7_2:56765048-56765067 None:intergenic 20.0%
!! TAAATAATATCTCACAAACA+TGG - chr7_2:56765049-56765068 None:intergenic 20.0%
!! TTACAACTTACAAGTATAAA+TGG - chr7_2:56765471-56765490 None:intergenic 20.0%
!!! CAAGAATATTTTTGACTACA+TGG - chr7_2:56762079-56762098 None:intergenic 25.0%
! AGTATTAGTATGGTATAAAG+AGG - chr7_2:56762106-56762125 None:intergenic 25.0%
! CATCTTATTCTTATCTTTGT+AGG + chr7_2:56762248-56762267 Msa1064250:intron 25.0%
! CGGTAATTAATGTTTATGTT+TGG + chr7_2:56762349-56762368 Msa1064250:intron 25.0%
! TGATATTTACACAAAAGACT+AGG - chr7_2:56762500-56762519 None:intergenic 25.0%
! AAATGCTACAACAATAAAAG+AGG - chr7_2:56762557-56762576 None:intergenic 25.0%
! AGATTATGTACAATATTGTC+AGG + chr7_2:56762651-56762670 Msa1064250:intron 25.0%
!!! TGATTCTCATTGTATTTTTG+TGG + chr7_2:56762950-56762969 Msa1064250:intron 25.0%
!! TTTGTGGAAACTTACTATTT+TGG - chr7_2:56763085-56763104 None:intergenic 25.0%
! CGTATTTGTATATCATTCTA+CGG + chr7_2:56763156-56763175 Msa1064250:intron 25.0%
! CAATATCTCAACAACTTAAA+AGG - chr7_2:56763788-56763807 None:intergenic 25.0%
! TTATTAATTAGGGGTTAACT+AGG + chr7_2:56763873-56763892 Msa1064250:intron 25.0%
!! ACATATTTTCAGTCTTAAGA+TGG + chr7_2:56763949-56763968 Msa1064250:intron 25.0%
! TAAACTTATCATAGAAAAGG+TGG - chr7_2:56764192-56764211 None:intergenic 25.0%
! ACACAAAAATTATAAGTTCC+AGG - chr7_2:56764503-56764522 None:intergenic 25.0%
! ATCAAGGTAGAATAAACAAT+AGG + chr7_2:56764569-56764588 Msa1064250:intron 25.0%
! TCAAGGTAGAATAAACAATA+GGG + chr7_2:56764570-56764589 Msa1064250:intron 25.0%
!! TTTTATGGGATATACAATTC+AGG - chr7_2:56764869-56764888 None:intergenic 25.0%
!! TTTGTCAGTTTGAAACTAAA+CGG + chr7_2:56764910-56764929 Msa1064250:intron 25.0%
! TGGCTTGATTACATATATAT+TGG + chr7_2:56765193-56765212 Msa1064250:three_prime_UTR 25.0%
! ATTCAATAACAACTTGTGAT+AGG + chr7_2:56765509-56765528 Msa1064250:three_prime_UTR 25.0%
AAAAGACAGTTCTTGATCAA+GGG - chr7_2:56761878-56761897 None:intergenic 30.0%
!! TTGTTTGTTGTTGAATCTTC+TGG - chr7_2:56761952-56761971 None:intergenic 30.0%
AGATTCAACAACAAACAAAG+AGG + chr7_2:56761954-56761973 Msa1064250:CDS 30.0%
TTTGAATTATTCGACACTGA+TGG + chr7_2:56762023-56762042 Msa1064250:CDS 30.0%
! AGGTATTGTTGTTATTCACA+AGG + chr7_2:56762179-56762198 Msa1064250:intron 30.0%
! AGACTAGGAATTATTTTCCT+TGG - chr7_2:56762485-56762504 None:intergenic 30.0%
ATTGTTGTAGCATTTAGCTA+TGG + chr7_2:56762562-56762581 Msa1064250:intron 30.0%
ATTTAGAGATAGGGATTCAA+TGG + chr7_2:56762599-56762618 Msa1064250:intron 30.0%
!! AATTTGCTGAAATGACACAA+TGG - chr7_2:56762733-56762752 None:intergenic 30.0%
TGTATTGTAGGGTAAGATAT+CGG + chr7_2:56762977-56762996 Msa1064250:intron 30.0%
! TTTTACTGATAGAGAGATTC+AGG + chr7_2:56763040-56763059 Msa1064250:CDS 30.0%
CTAAAAAGTTAGAACTAGCA+AGG - chr7_2:56763113-56763132 None:intergenic 30.0%
! TTTTAGTACTCACGTAGTTT+CGG + chr7_2:56763306-56763325 Msa1064250:intron 30.0%
ACATAATTTGAGCTATAGAG+AGG + chr7_2:56763475-56763494 Msa1064250:intron 30.0%
CATAATTTGAGCTATAGAGA+GGG + chr7_2:56763476-56763495 Msa1064250:intron 30.0%
TACCTTAAGGTAATATTTGC+TGG + chr7_2:56763544-56763563 Msa1064250:intron 30.0%
! AACTTACTTTCGGACATTTT+GGG - chr7_2:56763583-56763602 None:intergenic 30.0%
TGTTCCTAACAACTTACTTT+CGG - chr7_2:56763593-56763612 None:intergenic 30.0%
GAATGTACATTTATATGGGT+AGG - chr7_2:56763904-56763923 None:intergenic 30.0%
GGGAGAATGTACATTTATAT+GGG - chr7_2:56763908-56763927 None:intergenic 30.0%
CTGACAATGTGTTTATAAGT+GGG + chr7_2:56764117-56764136 Msa1064250:intron 30.0%
TGACAATGTGTTTATAAGTG+GGG + chr7_2:56764118-56764137 Msa1064250:intron 30.0%
TTATCATAGAAAAGGTGGTT+GGG - chr7_2:56764187-56764206 None:intergenic 30.0%
CGCTAAACTTATCATAGAAA+AGG - chr7_2:56764195-56764214 None:intergenic 30.0%
ATTATAAGTTCCAGGTGATA+TGG - chr7_2:56764495-56764514 None:intergenic 30.0%
!! ATAAACAATAGGGTGCTATT+TGG + chr7_2:56764580-56764599 Msa1064250:intron 30.0%
!!! TATAGGCATTTTGGATTAGT+AGG + chr7_2:56764670-56764689 Msa1064250:intron 30.0%
! TTGTCAGTTTGAAACTAAAC+GGG + chr7_2:56764911-56764930 Msa1064250:intron 30.0%
TTCAACACACAAAAAGAGTA+TGG - chr7_2:56764994-56765013 None:intergenic 30.0%
!!! GTTGAATTTTTTCTTGCGTT+AGG + chr7_2:56765008-56765027 Msa1064250:intron 30.0%
!!! ATTTTTTCTTGCGTTAGGAT+TGG + chr7_2:56765013-56765032 Msa1064250:intron 30.0%
! TGTGTTATTGTGCAAATTGT+AGG + chr7_2:56765229-56765248 Msa1064250:three_prime_UTR 30.0%
CTGAATTTAGATGTTCTGTT+TGG + chr7_2:56765334-56765353 Msa1064250:three_prime_UTR 30.0%
TGTAACAACTTAATGCTTGT+CGG + chr7_2:56765486-56765505 Msa1064250:three_prime_UTR 30.0%
GTAGCACAAAACTTAGATGT+TGG - chr7_2:56761660-56761679 None:intergenic 35.0%
! GCAATTCACGATTTGGAAAT+TGG - chr7_2:56761730-56761749 None:intergenic 35.0%
CAAAAGACAGTTCTTGATCA+AGG - chr7_2:56761879-56761898 None:intergenic 35.0%
CAGTCATCTTCTATACTTAG+AGG + chr7_2:56761921-56761940 Msa1064250:intron 35.0%
GACTACATGGTTATTGTTGA+TGG - chr7_2:56762066-56762085 None:intergenic 35.0%
TTTAGGTACTATTGATGCCA+AGG + chr7_2:56762139-56762158 Msa1064250:intron 35.0%
TTCAGTCATCTCAAATCCAA+GGG - chr7_2:56762275-56762294 None:intergenic 35.0%
CAACGAGTGGTTATAAAAAG+GGG - chr7_2:56762314-56762333 None:intergenic 35.0%
GCAACGAGTGGTTATAAAAA+GGG - chr7_2:56762315-56762334 None:intergenic 35.0%
TGCAACGAGTGGTTATAAAA+AGG - chr7_2:56762316-56762335 None:intergenic 35.0%
ACAACATAATATGCAACGAG+TGG - chr7_2:56762327-56762346 None:intergenic 35.0%
! GGAATTATTTTCCTTGGCAA+CGG - chr7_2:56762479-56762498 None:intergenic 35.0%
!! AAAGAGGTATCACAGAGAAA+GGG - chr7_2:56762541-56762560 None:intergenic 35.0%
!! AAAAGAGGTATCACAGAGAA+AGG - chr7_2:56762542-56762561 None:intergenic 35.0%
TGAATTTGAGCACATGATGA+CGG + chr7_2:56762806-56762825 Msa1064250:CDS 35.0%
! AGTGTCTCTTTCTCCTATTT+TGG - chr7_2:56762832-56762851 None:intergenic 35.0%
! TTTTGTGGTCACTGTATTGT+AGG + chr7_2:56762965-56762984 Msa1064250:intron 35.0%
TTTGTGGTCACTGTATTGTA+GGG + chr7_2:56762966-56762985 Msa1064250:intron 35.0%
AACTAGCAAGGATATGTTTG+TGG - chr7_2:56763101-56763120 None:intergenic 35.0%
! ATTGAAAGTATAGTGCGCAT+TGG + chr7_2:56763277-56763296 Msa1064250:intron 35.0%
! TTGAAAGTATAGTGCGCATT+GGG + chr7_2:56763278-56763297 Msa1064250:intron 35.0%
GACATTCATGTAAACATCGA+AGG + chr7_2:56763367-56763386 Msa1064250:intron 35.0%
TAGAGAGGGAATCTGATATA+TGG + chr7_2:56763490-56763509 Msa1064250:intron 35.0%
TGATATATGGTTGCATTGCA+TGG + chr7_2:56763503-56763522 Msa1064250:intron 35.0%
CACCAGCAAATATTACCTTA+AGG - chr7_2:56763549-56763568 None:intergenic 35.0%
! CTTAAGGTAATATTTGCTGG+TGG + chr7_2:56763547-56763566 Msa1064250:intron 35.0%
! CAACTTACTTTCGGACATTT+TGG - chr7_2:56763584-56763603 None:intergenic 35.0%
ATGTCCGAAAGTAAGTTGTT+AGG + chr7_2:56763586-56763605 Msa1064250:intron 35.0%
! TACTACTGTAACTTGCAAGA+TGG - chr7_2:56763677-56763696 None:intergenic 35.0%
GAGTTACTACATCAACCTTA+GGG - chr7_2:56763751-56763770 None:intergenic 35.0%
TGAGTTACTACATCAACCTT+AGG - chr7_2:56763752-56763771 None:intergenic 35.0%
GGGGAGAATGTACATTTATA+TGG - chr7_2:56763909-56763928 None:intergenic 35.0%
CCACTTATAAACACATTGTC+AGG - chr7_2:56764119-56764138 None:intergenic 35.0%
CCTGACAATGTGTTTATAAG+TGG + chr7_2:56764116-56764135 Msa1064250:intron 35.0%
GACAATGTGTTTATAAGTGG+GGG + chr7_2:56764119-56764138 Msa1064250:intron 35.0%
CTTATCATAGAAAAGGTGGT+TGG - chr7_2:56764188-56764207 None:intergenic 35.0%
GTCAGTTACAATGGCAATTT+GGG + chr7_2:56764613-56764632 Msa1064250:intron 35.0%
! GCACATTTGTATAGGCATTT+TGG + chr7_2:56764661-56764680 Msa1064250:intron 35.0%
CATAACAAGTAGTACAAGCA+GGG - chr7_2:56764808-56764827 None:intergenic 35.0%
ACATAACAAGTAGTACAAGC+AGG - chr7_2:56764809-56764828 None:intergenic 35.0%
CTGGTTCCTATGATTACAAT+AGG + chr7_2:56764841-56764860 Msa1064250:intron 35.0%
CAGGAACCTATTGTAATCAT+AGG - chr7_2:56764850-56764869 None:intergenic 35.0%
! TGTCAGTTTGAAACTAAACG+GGG + chr7_2:56764912-56764931 Msa1064250:intron 35.0%
ATAATATGCAGATGATCGAG+AGG + chr7_2:56765087-56765106 Msa1064250:intron 35.0%
! ATCATGATGATGAACACAAC+AGG + chr7_2:56765127-56765146 Msa1064250:CDS 35.0%
GATGTAGATATGACTAGTGA+CGG - chr7_2:56765156-56765175 None:intergenic 35.0%
TGTATCTTATCTCCGATCAT+AGG + chr7_2:56765432-56765451 Msa1064250:three_prime_UTR 35.0%
GACAATGTTTCTCCTATGAT+CGG - chr7_2:56765447-56765466 None:intergenic 35.0%
ATCGTACCATTGTGGAACTA+GGG - chr7_2:56761755-56761774 None:intergenic 40.0%
CATAGCAACATTAAGCTCCT+TGG - chr7_2:56762159-56762178 None:intergenic 40.0%
AGGAGCTTAATGTTGCTATG+AGG + chr7_2:56762159-56762178 Msa1064250:CDS 40.0%
CTTCAGTCATCTCAAATCCA+AGG - chr7_2:56762276-56762295 None:intergenic 40.0%
! TGGATTTGAGATGACTGAAG+AGG + chr7_2:56762276-56762295 Msa1064250:CDS 40.0%
TGGTTATAAAAAGGGGCAGA+GGG - chr7_2:56762307-56762326 None:intergenic 40.0%
CGTTGCATATTATGTTGTCG+CGG + chr7_2:56762329-56762348 Msa1064250:intron 40.0%
GTATCACAGAGAAAGGGAAT+TGG - chr7_2:56762535-56762554 None:intergenic 40.0%
AAATGATAGCAGATGTCGAC+AGG + chr7_2:56762757-56762776 Msa1064250:CDS 40.0%
AATGATAGCAGATGTCGACA+GGG + chr7_2:56762758-56762777 Msa1064250:CDS 40.0%
AGGAGAAAGAGACACTAAAG+AGG + chr7_2:56762836-56762855 Msa1064250:CDS 40.0%
TGATAGAGAGATTCAGGAGA+TGG + chr7_2:56763046-56763065 Msa1064250:CDS 40.0%
TATATCATTCTACGGTGAGC+TGG + chr7_2:56763164-56763183 Msa1064250:intron 40.0%
ATATCATTCTACGGTGAGCT+GGG + chr7_2:56763165-56763184 Msa1064250:intron 40.0%
! GGTGGAGATATGTGTGTTTT+AGG + chr7_2:56763186-56763205 Msa1064250:intron 40.0%
TTAGCGTTCATAACCCACTT+CGG + chr7_2:56764209-56764228 Msa1064250:intron 40.0%
CTAAACTAACCCACCCAAAT+TGG - chr7_2:56764309-56764328 None:intergenic 40.0%
GAAGGATATGTTCTGCCATA+TGG + chr7_2:56764360-56764379 Msa1064250:intron 40.0%
TATGTTCTGCCATATGGTAG+CGG + chr7_2:56764366-56764385 Msa1064250:intron 40.0%
TGCGATTTAGCTGGAAATCA+AGG + chr7_2:56764553-56764572 Msa1064250:intron 40.0%
!! ACAATAGGGTGCTATTTGGT+CGG + chr7_2:56764584-56764603 Msa1064250:intron 40.0%
GGTCAGTTACAATGGCAATT+TGG + chr7_2:56764612-56764631 Msa1064250:intron 40.0%
AATGGCAATTTGGGAGTTAG+AGG + chr7_2:56764622-56764641 Msa1064250:intron 40.0%
GGAGTTAGAGGTTAATTAGC+AGG + chr7_2:56764634-56764653 Msa1064250:intron 40.0%
CAGGTTCTGCACATTTGTAT+AGG + chr7_2:56764653-56764672 Msa1064250:intron 40.0%
! TCTCTTAGTTGTGACTTGTG+AGG + chr7_2:56764704-56764723 Msa1064250:intron 40.0%
! CTCTTAGTTGTGACTTGTGA+GGG + chr7_2:56764705-56764724 Msa1064250:intron 40.0%
! TCTTAGTTGTGACTTGTGAG+GGG + chr7_2:56764706-56764725 Msa1064250:intron 40.0%
CCTGCAATGGAGAGAAAATA+AGG - chr7_2:56764747-56764766 None:intergenic 40.0%
!!! CCTTATTTTCTCTCCATTGC+AGG + chr7_2:56764744-56764763 Msa1064250:intron 40.0%
GAACACTGTTATTCCTGCAA+TGG - chr7_2:56764760-56764779 None:intergenic 40.0%
! TACAAGCAGGGAAAGTGTAT+GGG - chr7_2:56764796-56764815 None:intergenic 40.0%
!! GTACTACTTGTTATGTCCTG+TGG + chr7_2:56764813-56764832 Msa1064250:intron 40.0%
! GTTATGTCCTGTGGTTTTTC+TGG + chr7_2:56764822-56764841 Msa1064250:intron 40.0%
ATAGGAACCAGAAAAACCAC+AGG - chr7_2:56764832-56764851 None:intergenic 40.0%
! GTCAGTTTGAAACTAAACGG+GGG + chr7_2:56764913-56764932 Msa1064250:intron 40.0%
! TCAGTTTGAAACTAAACGGG+GGG + chr7_2:56764914-56764933 Msa1064250:intron 40.0%
ATCATCATGATGAACTCCTC+TGG - chr7_2:56765118-56765137 None:intergenic 40.0%
! CTACATCGAGTAGTTAGCTT+TGG + chr7_2:56765169-56765188 Msa1064250:three_prime_UTR 40.0%
AGACATACATCAATGCTCAC+AGG - chr7_2:56765316-56765335 None:intergenic 40.0%
TGTTTGGACCAAATGCAACT+GGG + chr7_2:56765350-56765369 Msa1064250:three_prime_UTR 40.0%
!! CATAAGTGTGTTACTTGCTC+TGG - chr7_2:56765554-56765573 None:intergenic 40.0%
TAGGGCAGCAATTCACGATT+TGG - chr7_2:56761737-56761756 None:intergenic 45.0%
GATCGTACCATTGTGGAACT+AGG - chr7_2:56761756-56761775 None:intergenic 45.0%
TTATTCGACACTGATGGCTC+AGG + chr7_2:56762029-56762048 Msa1064250:CDS 45.0%
TCTTATCTTTGTAGGGCCCT+TGG + chr7_2:56762256-56762275 Msa1064250:intron 45.0%
TTATAAAAAGGGGCAGAGGG+GGG - chr7_2:56762304-56762323 None:intergenic 45.0%
GTTATAAAAAGGGGCAGAGG+GGG - chr7_2:56762305-56762324 None:intergenic 45.0%
GGTTATAAAAAGGGGCAGAG+GGG - chr7_2:56762306-56762325 None:intergenic 45.0%
GTGGTTATAAAAAGGGGCAG+AGG - chr7_2:56762308-56762327 None:intergenic 45.0%
! TTTTCCTTGGCAACGGTCAA+TGG - chr7_2:56762472-56762491 None:intergenic 45.0%
!! CACATGATGACGGCCAAAAT+AGG + chr7_2:56762816-56762835 Msa1064250:CDS 45.0%
GTAGGGTAAGATATCGGCAT+CGG + chr7_2:56762983-56763002 Msa1064250:intron 45.0%
! TATCGGCATCGGATATCAAG+CGG + chr7_2:56762994-56763013 Msa1064250:CDS 45.0%
!! AAGCGGATTGCAAAAGAGCT+AGG + chr7_2:56763011-56763030 Msa1064250:CDS 45.0%
! CTGTAACTTGCAAGATGGAG+TGG - chr7_2:56763672-56763691 None:intergenic 45.0%
GGTTCGTGGACATAAATGGT+GGG - chr7_2:56764035-56764054 None:intergenic 45.0%
TGGTTCGTGGACATAAATGG+TGG - chr7_2:56764036-56764055 None:intergenic 45.0%
! GCTTGGTTCGTGGACATAAA+TGG - chr7_2:56764039-56764058 None:intergenic 45.0%
GTGTGTTAAGAGTCCCACTT+CGG + chr7_2:56764082-56764101 Msa1064250:intron 45.0%
TTAAGAGTCCCACTTCGGAT+AGG + chr7_2:56764087-56764106 Msa1064250:intron 45.0%
CTAACACAACCCCACAAAAG+CGG - chr7_2:56764163-56764182 None:intergenic 45.0%
GAATCGAACATGTGACCTAG+AGG - chr7_2:56764277-56764296 None:intergenic 45.0%
AAGTTTAGCGTTCCTGCTGA+AGG + chr7_2:56764342-56764361 Msa1064250:intron 45.0%
ATGTTCTGCCATATGGTAGC+GGG + chr7_2:56764367-56764386 Msa1064250:intron 45.0%
GTACAATACACACGATGCGT+AGG + chr7_2:56764521-56764540 Msa1064250:intron 45.0%
ACTTGGACATGCGATTTAGC+TGG + chr7_2:56764544-56764563 Msa1064250:intron 45.0%
CGGTCAAAGGTCAGTTACAA+TGG + chr7_2:56764604-56764623 Msa1064250:intron 45.0%
! ACAAGCAGGGAAAGTGTATG+GGG - chr7_2:56764795-56764814 None:intergenic 45.0%
! GTACAAGCAGGGAAAGTGTA+TGG - chr7_2:56764797-56764816 None:intergenic 45.0%
!! ATCGAGTAGTTAGCTTTGGC+TGG + chr7_2:56765173-56765192 Msa1064250:three_prime_UTR 45.0%
CTGTTTGGACCAAATGCAAC+TGG + chr7_2:56765349-56765368 Msa1064250:three_prime_UTR 45.0%
CTACTGTTCCCAGTTGCATT+TGG - chr7_2:56765361-56765380 None:intergenic 45.0%
!! ACTTGCTCTGGAATGGTTGT+CGG - chr7_2:56765542-56765561 None:intergenic 45.0%
!! GTGTGTTACTTGCTCTGGAA+TGG - chr7_2:56765549-56765568 None:intergenic 45.0%
TTGCTGCCCTAGTTCCACAA+TGG + chr7_2:56761746-56761765 Msa1064250:exon 50.0%
GCAGAGAGATCGTACCATTG+TGG - chr7_2:56761763-56761782 None:intergenic 50.0%
TCATCCATTGACCGTTGCCA+AGG + chr7_2:56762465-56762484 Msa1064250:intron 50.0%
ATAGCAGATGTCGACAGGGA+TGG + chr7_2:56762762-56762781 Msa1064250:CDS 50.0%
TAGCAGATGTCGACAGGGAT+GGG + chr7_2:56762763-56762782 Msa1064250:CDS 50.0%
AGAGCCTCTCCAAGATCCAT+TGG + chr7_2:56763976-56763995 Msa1064250:intron 50.0%
GAGCCTCTCCAAGATCCATT+GGG + chr7_2:56763977-56763996 Msa1064250:intron 50.0%
!! GATAGCGGAAACCTGATAGC+AGG - chr7_2:56764006-56764025 None:intergenic 50.0%
GCTATCAGGTTTCCGCTATC+AGG + chr7_2:56764006-56764025 Msa1064250:intron 50.0%
! TCGTGGACATAAATGGTGGG+TGG - chr7_2:56764032-56764051 None:intergenic 50.0%
! GCACTATTAGGCTTGGTTCG+TGG - chr7_2:56764049-56764068 None:intergenic 50.0%
CGAACCAAGCCTAATAGTGC+TGG + chr7_2:56764049-56764068 Msa1064250:intron 50.0%
ACGACCAGCACTATTAGGCT+TGG - chr7_2:56764056-56764075 None:intergenic 50.0%
!! CCTAATAGTGCTGGTCGTGA+GGG + chr7_2:56764058-56764077 Msa1064250:intron 50.0%
!! CTAATAGTGCTGGTCGTGAG+GGG + chr7_2:56764059-56764078 Msa1064250:intron 50.0%
!! TAATAGTGCTGGTCGTGAGG+GGG + chr7_2:56764060-56764079 Msa1064250:intron 50.0%
!!! ACCTCACAAGCCGCTTTTGT+GGG + chr7_2:56764150-56764169 Msa1064250:intron 50.0%
! CGCTTTTGTGGGGTTGTGTT+AGG + chr7_2:56764161-56764180 Msa1064250:intron 50.0%
CGTTCATAACCCACTTCGGT+TGG + chr7_2:56764213-56764232 Msa1064250:intron 50.0%
TCGAACATGTGACCTAGAGG+AGG - chr7_2:56764274-56764293 None:intergenic 50.0%
GTCACATGTTCGATTCTCCC+CGG + chr7_2:56764281-56764300 Msa1064250:intron 50.0%
! ATTCTCCCCGGTGCCAATTT+GGG + chr7_2:56764293-56764312 Msa1064250:intron 50.0%
TAACCCACCCAAATTGGCAC+CGG - chr7_2:56764303-56764322 None:intergenic 50.0%
GGCAGAACATATCCTTCAGC+AGG - chr7_2:56764357-56764376 None:intergenic 50.0%
! TGTTCTGCCATATGGTAGCG+GGG + chr7_2:56764368-56764387 Msa1064250:intron 50.0%
AGGTTCACAGCCATATCACC+TGG + chr7_2:56764482-56764501 Msa1064250:intron 50.0%
TACACACGATGCGTAGGACT+TGG + chr7_2:56764527-56764546 Msa1064250:intron 50.0%
!! GGTGCTATTTGGTCGGTCAA+AGG + chr7_2:56764591-56764610 Msa1064250:intron 50.0%
! TGTGACTTGTGAGGGGAAAC+TGG + chr7_2:56764713-56764732 Msa1064250:intron 50.0%
! CAAGCAGGGAAAGTGTATGG+GGG - chr7_2:56764794-56764813 None:intergenic 50.0%
ACTAAACGGGGGGTTTGCAT+TGG + chr7_2:56764924-56764943 Msa1064250:intron 50.0%
! TGATCGAGAGGTTGATCCAG+AGG + chr7_2:56765099-56765118 Msa1064250:CDS 50.0%
CTGGAATGGTTGTCGGAGTT+GGG - chr7_2:56765535-56765554 None:intergenic 50.0%
! TCTGGAATGGTTGTCGGAGT+TGG - chr7_2:56765536-56765555 None:intergenic 50.0%
TCATTCTACGGTGAGCTGGG+TGG + chr7_2:56763168-56763187 Msa1064250:intron 55.0%
TGGCCCAATGGATCTTGGAG+AGG - chr7_2:56763983-56764002 None:intergenic 55.0%
AGCGGAAACCTGATAGCAGG+TGG - chr7_2:56764003-56764022 None:intergenic 55.0%
!! AATGGTGGGTGGCCTGATAG+CGG - chr7_2:56764021-56764040 None:intergenic 55.0%
!! GCCTAATAGTGCTGGTCGTG+AGG + chr7_2:56764057-56764076 Msa1064250:intron 55.0%
CCCTCACGACCAGCACTATT+AGG - chr7_2:56764061-56764080 None:intergenic 55.0%
GTCCCACTTCGGATAGGTGA+TGG + chr7_2:56764093-56764112 Msa1064250:intron 55.0%
GGCCATCACCTATCCGAAGT+GGG - chr7_2:56764098-56764117 None:intergenic 55.0%
AGGCCATCACCTATCCGAAG+TGG - chr7_2:56764099-56764118 None:intergenic 55.0%
CAAAAGCGGCTTGTGAGGTG+AGG - chr7_2:56764149-56764168 None:intergenic 55.0%
!!! CACCTCACAAGCCGCTTTTG+TGG + chr7_2:56764149-56764168 Msa1064250:intron 55.0%
!!! CCTCACAAGCCGCTTTTGTG+GGG + chr7_2:56764151-56764170 Msa1064250:intron 55.0%
ACCATCAGGCCAACCGAAGT+GGG - chr7_2:56764225-56764244 None:intergenic 55.0%
!! TTCGGTTGGCCTGATGGTGT+TGG + chr7_2:56764227-56764246 Msa1064250:intron 55.0%
!! TTGGCCTGATGGTGTTGGCT+TGG + chr7_2:56764232-56764251 Msa1064250:intron 55.0%
!! TGGCCTGATGGTGTTGGCTT+GGG + chr7_2:56764233-56764252 Msa1064250:intron 55.0%
GATCCCAAGCCAACACCATC+AGG - chr7_2:56764239-56764258 None:intergenic 55.0%
! CTAGAGGAGGAGCACACTCT+AGG - chr7_2:56764261-56764280 None:intergenic 55.0%
CTAGAGTGTGCTCCTCCTCT+AGG + chr7_2:56764259-56764278 Msa1064250:intron 55.0%
! GATTCTCCCCGGTGCCAATT+TGG + chr7_2:56764292-56764311 Msa1064250:intron 55.0%
AACCCACCCAAATTGGCACC+GGG - chr7_2:56764302-56764321 None:intergenic 55.0%
AGTCCTTCCCCGCTACCATA+TGG - chr7_2:56764378-56764397 None:intergenic 55.0%
GATGTCGACAGGGATGGGAG+TGG + chr7_2:56762768-56762787 Msa1064250:CDS 60.0%
GCAGGTGGCCCAATGGATCT+TGG - chr7_2:56763988-56764007 None:intergenic 60.0%
CCTGATAGCAGGTGGCCCAA+TGG - chr7_2:56763995-56764014 None:intergenic 60.0%
CCATTGGGCCACCTGCTATC+AGG + chr7_2:56763992-56764011 Msa1064250:intron 60.0%
CCCCACAAAAGCGGCTTGTG+AGG - chr7_2:56764154-56764173 None:intergenic 60.0%
!! ACCCACTTCGGTTGGCCTGA+TGG + chr7_2:56764221-56764240 Msa1064250:intron 60.0%
CACCATCAGGCCAACCGAAG+TGG - chr7_2:56764226-56764245 None:intergenic 60.0%
! TCCCCGGTGCCAATTTGGGT+GGG + chr7_2:56764297-56764316 Msa1064250:intron 60.0%
ACCCACCCAAATTGGCACCG+GGG - chr7_2:56764301-56764320 None:intergenic 60.0%
!! CTGCCATATGGTAGCGGGGA+AGG + chr7_2:56764372-56764391 Msa1064250:intron 60.0%
! CTCCCCGGTGCCAATTTGGG+TGG + chr7_2:56764296-56764315 Msa1064250:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 56761651 56765581 56761651 ID=Msa1064250;Name=Msa1064250
chr7_2 mRNA 56761651 56765581 56761651 ID=Msa1064250-mRNA-1;Parent=Msa1064250;Name=Msa1064250-mRNA-1;_AED=0.18;_eAED=0.18;_QI=114|1|1|1|1|1|7|419|171
chr7_2 exon 56761651 56761767 56761651 ID=Msa1064250-mRNA-1:exon:10728;Parent=Msa1064250-mRNA-1
chr7_2 exon 56761924 56762050 56761924 ID=Msa1064250-mRNA-1:exon:10729;Parent=Msa1064250-mRNA-1
chr7_2 exon 56762144 56762180 56762144 ID=Msa1064250-mRNA-1:exon:10730;Parent=Msa1064250-mRNA-1
chr7_2 exon 56762270 56762297 56762270 ID=Msa1064250-mRNA-1:exon:10731;Parent=Msa1064250-mRNA-1
chr7_2 exon 56762747 56762899 56762747 ID=Msa1064250-mRNA-1:exon:10732;Parent=Msa1064250-mRNA-1
chr7_2 exon 56762987 56763089 56762987 ID=Msa1064250-mRNA-1:exon:10733;Parent=Msa1064250-mRNA-1
chr7_2 exon 56765098 56765581 56765098 ID=Msa1064250-mRNA-1:exon:10734;Parent=Msa1064250-mRNA-1
chr7_2 five_prime_UTR 56761651 56761764 56761651 ID=Msa1064250-mRNA-1:five_prime_utr;Parent=Msa1064250-mRNA-1
chr7_2 CDS 56761765 56761767 56761765 ID=Msa1064250-mRNA-1:cds;Parent=Msa1064250-mRNA-1
chr7_2 CDS 56761924 56762050 56761924 ID=Msa1064250-mRNA-1:cds;Parent=Msa1064250-mRNA-1
chr7_2 CDS 56762144 56762180 56762144 ID=Msa1064250-mRNA-1:cds;Parent=Msa1064250-mRNA-1
chr7_2 CDS 56762270 56762297 56762270 ID=Msa1064250-mRNA-1:cds;Parent=Msa1064250-mRNA-1
chr7_2 CDS 56762747 56762899 56762747 ID=Msa1064250-mRNA-1:cds;Parent=Msa1064250-mRNA-1
chr7_2 CDS 56762987 56763089 56762987 ID=Msa1064250-mRNA-1:cds;Parent=Msa1064250-mRNA-1
chr7_2 CDS 56765098 56765162 56765098 ID=Msa1064250-mRNA-1:cds;Parent=Msa1064250-mRNA-1
chr7_2 three_prime_UTR 56765163 56765581 56765163 ID=Msa1064250-mRNA-1:three_prime_utr;Parent=Msa1064250-mRNA-1
Gene Sequence

>Msa1064250

ATGTCATCTTCTATACTTAGAGGAGATTCCAGAAGATTCAACAACAAACAAAGAGGAAAACATCATTTGACGCAACAGAAGAGACAAGAGATTAAAGAAGCTTTTGAATTATTCGACACTGATGGCTCAGGTACTATTGATGCCAAGGAGCTTAATGTTGCTATGAGGGCCCTTGGATTTGAGATGACTGAAGAGCAAATTGAGCAAATGATAGCAGATGTCGACAGGGATGGGAGTGGAGCAATCGACTATGATGAATTTGAGCACATGATGACGGCCAAAATAGGAGAAAGAGACACTAAAGAGGAGCTCATGAAAGCTTTCCATATTATTGATCAAGACAAAAATGGTAAGATATCGGCATCGGATATCAAGCGGATTGCAAAAGAGCTAGGTCAAAATTTTACTGATAGAGAGATTCAGGAGATGGTTGATGAAGCAGACCAAAATAATGATCGAGAGGTTGATCCAGAGGAGTTCATCATGATGATGAACACAACAGGCTACCGTCACTAG
Protein sequence

>Msa1064250

MSSSILRGDSRRFNNKQRGKHHLTQQKRQEIKEAFELFDTDGSGTIDAKELNVAMRALGFEMTEEQIEQMIADVDRDGSGAIDYDEFEHMMTAKIGERDTKEELMKAFHIIDQDKNGKISASDIKRIAKELGQNFTDREIQEMVDEADQNNDREVDPEEFIMMMNTTGYRH*