Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275020 | XP_013462730.1 | 100.000 | 274 | 0 | 0 | 1 | 274 | 1 | 274 | 0.0 | 540 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275020 | sp|Q55909|Y305_SYNY3 | 40.385 | 208 | 117 | 4 | 34 | 236 | 1 | 206 | 5.98e-43 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275020 | A0A072VF28 | 100.000 | 274 | 0 | 0 | 1 | 274 | 1 | 274 | 0.0 | 540 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021210 | Msa0275020 | 0.800153 | 1.647451e-48 | -8.615850e-47 |
| Msa0053010 | Msa0275020 | 0.803865 | 2.842077e-49 | -8.615850e-47 |
| Msa0090570 | Msa0275020 | 0.812086 | 5.061110e-51 | -8.615850e-47 |
| Msa0106710 | Msa0275020 | 0.802498 | 5.452725e-49 | -8.615850e-47 |
| Msa0118540 | Msa0275020 | 0.805328 | 1.407389e-49 | -8.615850e-47 |
| Msa0139670 | Msa0275020 | 0.815406 | 9.396511e-52 | -8.615850e-47 |
| Msa0183850 | Msa0275020 | 0.811630 | 6.360541e-51 | -8.615850e-47 |
| Msa0204960 | Msa0275020 | 0.814286 | 1.664781e-51 | -8.615850e-47 |
| Msa0207040 | Msa0275020 | -0.840669 | 7.566904e-58 | -8.615850e-47 |
| Msa0207350 | Msa0275020 | 0.812490 | 4.129857e-51 | -8.615850e-47 |
| Msa0219590 | Msa0275020 | 0.800327 | 1.518162e-48 | -8.615850e-47 |
| Msa0220730 | Msa0275020 | 0.836223 | 1.061588e-56 | -8.615850e-47 |
| Msa0240270 | Msa0275020 | 0.808374 | 3.195566e-50 | -8.615850e-47 |
| Msa0241140 | Msa0275020 | 0.803332 | 3.666899e-49 | -8.615850e-47 |
| Msa0257490 | Msa0275020 | 0.804165 | 2.462749e-49 | -8.615850e-47 |
| Msa0271770 | Msa0275020 | 0.849209 | 3.744640e-60 | -8.615850e-47 |
| Msa0275010 | Msa0275020 | 0.818968 | 1.485835e-52 | -8.615850e-47 |
| Msa0275020 | Msa0307310 | 0.806747 | 7.079524e-50 | -8.615850e-47 |
| Msa0275020 | Msa0315940 | 0.997482 | 2.578834e-243 | -8.615850e-47 |
| Msa0275020 | Msa0317970 | 0.816398 | 5.645073e-52 | -8.615850e-47 |
| Msa0275020 | Msa0342750 | 0.827157 | 1.826790e-54 | -8.615850e-47 |
| Msa0275020 | Msa0343850 | 0.836576 | 8.630759e-57 | -8.615850e-47 |
| Msa0275020 | Msa0347750 | 0.811668 | 6.240042e-51 | -8.615850e-47 |
| Msa0275020 | Msa0369920 | 0.833466 | 5.248040e-56 | -8.615850e-47 |
| Msa0275020 | Msa0371950 | 0.809832 | 1.557129e-50 | -8.615850e-47 |
| Msa0275020 | Msa0381610 | -0.823465 | 1.365425e-53 | -8.615850e-47 |
| Msa0275020 | Msa0382370 | 0.828346 | 9.460427e-55 | -8.615850e-47 |
| Msa0275020 | Msa0394470 | 0.807454 | 5.014426e-50 | -8.615850e-47 |
| Msa0275020 | Msa0397460 | 0.800119 | 1.673710e-48 | -8.615850e-47 |
| Msa0275020 | Msa0398200 | 0.821583 | 3.738473e-53 | -8.615850e-47 |
| Msa0275020 | Msa0403770 | 0.804193 | 2.429910e-49 | -8.615850e-47 |
| Msa0275020 | Msa0411390 | 0.802110 | 6.554185e-49 | -8.615850e-47 |
| Msa0275020 | Msa0417330 | 0.827310 | 1.679173e-54 | -8.615850e-47 |
| Msa0275020 | Msa0422180 | 0.811411 | 7.097110e-51 | -8.615850e-47 |
| Msa0275020 | Msa0426930 | 0.801725 | 7.862600e-49 | -8.615850e-47 |
| Msa0275020 | Msa0432160 | 0.826194 | 3.100342e-54 | -8.615850e-47 |
| Msa0275020 | Msa0434000 | 0.831791 | 1.366263e-55 | -8.615850e-47 |
| Msa0275020 | Msa0450400 | -0.841466 | 4.672345e-58 | -8.615850e-47 |
| Msa0275020 | Msa0458740 | 0.800327 | 1.518318e-48 | -8.615850e-47 |
| Msa0275020 | Msa0459260 | 0.811070 | 8.414140e-51 | -8.615850e-47 |
| Msa0275020 | Msa0467100 | 0.801415 | 9.103123e-49 | -8.615850e-47 |
| Msa0275020 | Msa0468410 | 0.801264 | 9.775073e-49 | -8.615850e-47 |
| Msa0275020 | Msa0476680 | 0.822945 | 1.805246e-53 | -8.615850e-47 |
| Msa0275020 | Msa0481970 | 0.809127 | 2.206011e-50 | -8.615850e-47 |
| Msa0275020 | Msa0482940 | 0.805291 | 1.432681e-49 | -8.615850e-47 |
| Msa0275020 | Msa0485490 | 0.822774 | 1.978238e-53 | -8.615850e-47 |
| Msa0275020 | Msa0509670 | 0.823262 | 1.522559e-53 | -8.615850e-47 |
| Msa0275020 | Msa0521010 | 0.828680 | 7.858699e-55 | -8.615850e-47 |
| Msa0275020 | Msa0549890 | 0.843586 | 1.278934e-58 | -8.615850e-47 |
| Msa0275020 | Msa0581400 | 0.824271 | 8.837579e-54 | -8.615850e-47 |
| Msa0275020 | Msa0610840 | -0.821299 | 4.347562e-53 | -8.615850e-47 |
| Msa0275020 | Msa0610880 | 0.803646 | 3.155763e-49 | -8.615850e-47 |
| Msa0275020 | Msa0613340 | 0.834203 | 3.432702e-56 | -8.615850e-47 |
| Msa0275020 | Msa0615010 | 0.802468 | 5.531713e-49 | -8.615850e-47 |
| Msa0275020 | Msa0618470 | 0.830204 | 3.350175e-55 | -8.615850e-47 |
| Msa0275020 | Msa0647190 | 0.818390 | 2.009395e-52 | -8.615850e-47 |
| Msa0275020 | Msa0649220 | 0.803651 | 3.148339e-49 | -8.615850e-47 |
| Msa0275020 | Msa0658040 | 0.807382 | 5.194365e-50 | -8.615850e-47 |
| Msa0275020 | Msa0663800 | 0.848203 | 7.118814e-60 | -8.615850e-47 |
| Msa0275020 | Msa0669410 | 0.805627 | 1.218554e-49 | -8.615850e-47 |
| Msa0275020 | Msa0675690 | 0.800769 | 1.233487e-48 | -8.615850e-47 |
| Msa0275020 | Msa0682680 | 0.827311 | 1.677994e-54 | -8.615850e-47 |
| Msa0275020 | Msa0690360 | 0.823163 | 1.606010e-53 | -8.615850e-47 |
| Msa0275020 | Msa0696540 | 0.806709 | 7.212281e-50 | -8.615850e-47 |
| Msa0275020 | Msa0705190 | 0.804766 | 1.845182e-49 | -8.615850e-47 |
| Msa0275020 | Msa0705990 | 0.808342 | 3.246338e-50 | -8.615850e-47 |
| Msa0275020 | Msa0709120 | 0.814917 | 1.206598e-51 | -8.615850e-47 |
| Msa0275020 | Msa0741070 | 0.802545 | 5.332143e-49 | -8.615850e-47 |
| Msa0275020 | Msa0748970 | 0.831217 | 1.891613e-55 | -8.615850e-47 |
| Msa0275020 | Msa0755050 | 0.806967 | 6.359753e-50 | -8.615850e-47 |
| Msa0275020 | Msa0756380 | 0.829467 | 5.065653e-55 | -8.615850e-47 |
| Msa0275020 | Msa0768290 | 0.801704 | 7.939715e-49 | -8.615850e-47 |
| Msa0275020 | Msa0800210 | 0.803979 | 2.691771e-49 | -8.615850e-47 |
| Msa0275020 | Msa0801730 | 0.803090 | 4.116001e-49 | -8.615850e-47 |
| Msa0275020 | Msa0808100 | 0.814197 | 1.741980e-51 | -8.615850e-47 |
| Msa0275020 | Msa0824590 | 0.804524 | 2.072877e-49 | -8.615850e-47 |
| Msa0275020 | Msa0832340 | 0.807890 | 4.052354e-50 | -8.615850e-47 |
| Msa0275020 | Msa0842710 | 0.806622 | 7.521927e-50 | -8.615850e-47 |
| Msa0275020 | Msa0844110 | 0.802410 | 5.684834e-49 | -8.615850e-47 |
| Msa0275020 | Msa0844420 | 0.828872 | 7.060059e-55 | -8.615850e-47 |
| Msa0275020 | Msa0844490 | 0.825065 | 5.742783e-54 | -8.615850e-47 |
| Msa0275020 | Msa0877710 | 0.823592 | 1.274924e-53 | -8.615850e-47 |
| Msa0275020 | Msa0888260 | 0.819879 | 9.208398e-53 | -8.615850e-47 |
| Msa0275020 | Msa0901070 | 0.815669 | 8.213611e-52 | -8.615850e-47 |
| Msa0275020 | Msa0916250 | 0.807010 | 6.227044e-50 | -8.615850e-47 |
| Msa0275020 | Msa0921420 | 0.808178 | 3.518413e-50 | -8.615850e-47 |
| Msa0275020 | Msa0925190 | 0.800191 | 1.618156e-48 | -8.615850e-47 |
| Msa0275020 | Msa0925870 | 0.845694 | 3.460856e-59 | -8.615850e-47 |
| Msa0275020 | Msa0927380 | 0.815592 | 8.544495e-52 | -8.615850e-47 |
| Msa0275020 | Msa0933380 | 0.831721 | 1.422000e-55 | -8.615850e-47 |
| Msa0275020 | Msa0936390 | 0.803422 | 3.512133e-49 | -8.615850e-47 |
| Msa0275020 | Msa0953440 | 0.808006 | 3.828596e-50 | -8.615850e-47 |
| Msa0275020 | Msa0960390 | 0.828008 | 1.141539e-54 | -8.615850e-47 |
| Msa0275020 | Msa0966750 | 0.803142 | 4.013856e-49 | -8.615850e-47 |
| Msa0275020 | Msa0971160 | 0.822018 | 2.964392e-53 | -8.615850e-47 |
| Msa0275020 | Msa0974950 | 0.820958 | 5.210406e-53 | -8.615850e-47 |
| Msa0275020 | Msa0987840 | 0.816157 | 6.389598e-52 | -8.615850e-47 |
| Msa0275020 | Msa0992600 | 0.808043 | 3.759578e-50 | -8.615850e-47 |
| Msa0275020 | Msa1002360 | 0.803889 | 2.809846e-49 | -8.615850e-47 |
| Msa0275020 | Msa1006810 | 0.802024 | 6.827474e-49 | -8.615850e-47 |
| Msa0275020 | Msa1011090 | 0.815605 | 8.487061e-52 | -8.615850e-47 |
| Msa0275020 | Msa1026940 | 0.806038 | 9.988891e-50 | -8.615850e-47 |
| Msa0275020 | Msa1054150 | -0.839799 | 1.276431e-57 | -8.615850e-47 |
| Msa0275020 | Msa1063420 | 0.816154 | 6.400366e-52 | -8.615850e-47 |
| Msa0275020 | Msa1063690 | 0.802903 | 4.497652e-49 | -8.615850e-47 |
| Msa0275020 | Msa1065010 | 0.820051 | 8.411794e-53 | -8.615850e-47 |
| Msa0275020 | Msa1076960 | 0.815038 | 1.134327e-51 | -8.615850e-47 |
| Msa0275020 | Msa1100130 | -0.815490 | 9.000553e-52 | -8.615850e-47 |
| Msa0275020 | Msa1120740 | 0.825068 | 5.734181e-54 | -8.615850e-47 |
| Msa0275020 | Msa1121480 | 0.803553 | 3.300502e-49 | -8.615850e-47 |
| Msa0275020 | Msa1121490 | 0.811159 | 8.046297e-51 | -8.615850e-47 |
| Msa0275020 | Msa1122860 | 0.800473 | 1.417737e-48 | -8.615850e-47 |
| Msa0275020 | Msa1127380 | 0.800282 | 1.550438e-48 | -8.615850e-47 |
| Msa0275020 | Msa1143020 | 0.812108 | 5.003207e-51 | -8.615850e-47 |
| Msa0275020 | Msa1221330 | 0.830199 | 3.358794e-55 | -8.615850e-47 |
| Msa0275020 | Msa1248830 | 0.901799 | 1.859063e-78 | -8.615850e-47 |
| Msa0275020 | Msa1254560 | 0.803871 | 2.835161e-49 | -8.615850e-47 |
| Msa0275020 | Msa1271130 | 0.830880 | 2.288887e-55 | -8.615850e-47 |
| Msa0275020 | Msa1275590 | 0.806527 | 7.878845e-50 | -8.615850e-47 |
| Msa0275020 | Msa1285550 | 0.800906 | 1.156634e-48 | -8.615850e-47 |
| Msa0275020 | Msa1323690 | 0.802992 | 4.311615e-49 | -8.615850e-47 |
| Msa0275020 | Msa1342630 | 0.810084 | 1.374027e-50 | -8.615850e-47 |
| Msa0275020 | Msa1370590 | 0.802581 | 5.242646e-49 | -8.615850e-47 |
| Msa0275020 | Msa1384100 | 0.804953 | 1.686651e-49 | -8.615850e-47 |
| Msa0275020 | Msa1420820 | 0.801097 | 1.057241e-48 | -8.615850e-47 |
| Msa0275020 | Msa1444120 | 0.805274 | 1.445052e-49 | -8.615850e-47 |
| Msa0275020 | Msa1446080 | 0.801539 | 8.584081e-49 | -8.615850e-47 |
| Msa0275020 | Msa1452710 | 0.808621 | 2.830616e-50 | -8.615850e-47 |
| Msa0275020 | Msa1456230 | 0.828935 | 6.818631e-55 | -8.615850e-47 |
| Msa0275020 | Msa1458750 | 0.813750 | 2.185845e-51 | -8.615850e-47 |
| Msa0275020 | Msa1462360 | 0.809817 | 1.568958e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275020 | MtrunA17_Chr2g0287701 | 100.000 | 274 | 0 | 0 | 1 | 274 | 1 | 274 | 0.0 | 540 |
| Msa0275020 | MtrunA17_Chr4g0065691 | 74.545 | 275 | 68 | 2 | 1 | 274 | 1 | 274 | 1.18e-142 | 401 |
| Msa0275020 | MtrunA17_Chr4g0014341 | 38.462 | 182 | 104 | 2 | 8 | 182 | 99 | 279 | 8.42e-27 | 106 |
| Msa0275020 | MtrunA17_Chr2g0291431 | 26.866 | 268 | 173 | 9 | 2 | 254 | 53 | 312 | 1.71e-16 | 77.8 |
| Msa0275020 | MtrunA17_Chr5g0398451 | 27.197 | 239 | 153 | 8 | 11 | 236 | 83 | 313 | 1.18e-14 | 72.8 |
| Msa0275020 | MtrunA17_Chr5g0411031 | 30.220 | 182 | 125 | 2 | 27 | 206 | 64 | 245 | 2.64e-12 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0275020 | AT5G19070.1 | 69.818 | 275 | 81 | 1 | 1 | 273 | 1 | 275 | 1.11e-133 | 379 |
| Msa0275020 | AT1G03260.1 | 66.912 | 272 | 85 | 4 | 1 | 269 | 4 | 273 | 3.81e-128 | 365 |
| Msa0275020 | AT5G19070.2 | 77.340 | 203 | 46 | 0 | 1 | 203 | 1 | 203 | 1.87e-107 | 311 |
| Msa0275020 | AT1G22850.2 | 36.747 | 166 | 104 | 1 | 30 | 195 | 134 | 298 | 1.91e-25 | 102 |
| Msa0275020 | AT1G22850.1 | 39.216 | 153 | 92 | 1 | 30 | 182 | 134 | 285 | 7.18e-25 | 102 |
| Msa0275020 | AT2G02370.2 | 25.097 | 259 | 175 | 8 | 17 | 261 | 66 | 319 | 1.79e-15 | 75.5 |
| Msa0275020 | AT2G02370.1 | 25.097 | 259 | 175 | 8 | 17 | 261 | 66 | 319 | 1.79e-15 | 75.5 |
| Msa0275020 | AT2G02370.3 | 25.097 | 259 | 175 | 8 | 17 | 261 | 66 | 319 | 1.79e-15 | 75.5 |
| Msa0275020 | AT4G09580.1 | 30.986 | 142 | 96 | 2 | 57 | 196 | 119 | 260 | 7.24e-11 | 62.0 |
| Msa0275020 | AT1G71940.2 | 29.012 | 162 | 113 | 2 | 32 | 191 | 79 | 240 | 8.96e-11 | 61.6 |
Find 101 sgRNAs with CRISPR-Local
Find 439 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCCACTGATTTAAATTT+TGG | 0.081182 | 2_3:-6931719 | None:intergenic |
| AATACGGAGATCTGGCTTTA+AGG | 0.193712 | 2_3:+6931745 | Msa0275020:CDS |
| ATGCAGGCATTTATCATTAT+TGG | 0.198938 | 2_3:+6934634 | Msa0275020:intron |
| TATACAAGTGCCAGCGTTAT+TGG | 0.216697 | 2_3:-6934356 | None:intergenic |
| TGGCAAATCTTGGAGGATTA+AGG | 0.259687 | 2_3:+6928418 | Msa0275020:five_prime_UTR |
| AGATAATTTAACATGTTAAA+TGG | 0.275688 | 2_3:-6933248 | None:intergenic |
| TTTCCTGGGCTTCTGCCTTC+AGG | 0.283741 | 2_3:+6928529 | Msa0275020:CDS |
| TTAGGATACGACATTGATTA+AGG | 0.289351 | 2_3:-6928328 | None:intergenic |
| TGTACAAATCACAAATAAAT+AGG | 0.299800 | 2_3:-6935063 | None:intergenic |
| CTATGGGTTGATCGTGATCT+TGG | 0.316743 | 2_3:+6928775 | Msa0275020:CDS |
| TGGAATACATGCTGGCTTCC+TGG | 0.319846 | 2_3:+6933297 | Msa0275020:CDS |
| GAAGACCGTTTGTTGTTTCT+AGG | 0.343792 | 2_3:+6931684 | Msa0275020:CDS |
| ATTTCAAACCTGGCAAATCT+TGG | 0.343939 | 2_3:+6928408 | Msa0275020:five_prime_UTR |
| CAAAATGATTTAAGAGAATC+AGG | 0.344378 | 2_3:-6935188 | None:intergenic |
| TTATGAAGGACTTTCTACTA+TGG | 0.344847 | 2_3:+6928758 | Msa0275020:CDS |
| TAAAGTTGCCAAGTCTGCTT+TGG | 0.353815 | 2_3:+6934815 | Msa0275020:CDS |
| TATGGGTTGATCGTGATCTT+GGG | 0.365098 | 2_3:+6928776 | Msa0275020:CDS |
| TGATCGTGATCTTGGGGCAT+GGG | 0.367341 | 2_3:+6928783 | Msa0275020:CDS |
| TACAGATTGTATTACTGCTT+CGG | 0.378177 | 2_3:+6933210 | Msa0275020:intron |
| GGTAGGAGTGTAATTTCATT+TGG | 0.380159 | 2_3:-6928229 | None:intergenic |
| ATTATTGGTCTCATAGTATC+AGG | 0.386699 | 2_3:+6934649 | Msa0275020:CDS |
| CATGTTAAATTATCTCTTGT+CGG | 0.390042 | 2_3:+6933256 | Msa0275020:CDS |
| GGCTTTGTTGCCGACTCTAT+AGG | 0.396257 | 2_3:+6931428 | Msa0275020:CDS |
| ATGTATTCCACAAGTGAAAC+AGG | 0.410716 | 2_3:-6933284 | None:intergenic |
| AATAATGTAATCTTGGTTGT+AGG | 0.418105 | 2_3:-6935128 | None:intergenic |
| GCAGGAGCTGCATTTCTTCT+CGG | 0.418531 | 2_3:+6931464 | Msa0275020:CDS |
| ATATGTTGGAACAACTCTTA+AGG | 0.423797 | 2_3:+6934376 | Msa0275020:CDS |
| GGCAAATCTTGGAGGATTAA+GGG | 0.425470 | 2_3:+6928419 | Msa0275020:five_prime_UTR |
| CATAGTCAATAATGTAATCT+TGG | 0.427580 | 2_3:-6935135 | None:intergenic |
| GTTTGTTGTTTCTAGGTTGA+AGG | 0.430295 | 2_3:+6931691 | Msa0275020:CDS |
| GGCTTTATCCAAAGCAGACT+TGG | 0.434804 | 2_3:-6934823 | None:intergenic |
| TTACATTCCTTTGACTGTCT+TGG | 0.437583 | 2_3:+6929871 | Msa0275020:CDS |
| TTGATCGTGATCTTGGGGCA+TGG | 0.438082 | 2_3:+6928782 | Msa0275020:CDS |
| CGTCTTCGTCGGTTAAATCA+AGG | 0.443235 | 2_3:-6928467 | None:intergenic |
| GTTTGTTGAGAACAGAGATT+CGG | 0.449008 | 2_3:-6928281 | None:intergenic |
| TTTCACTCTTCCTATTGAAA+AGG | 0.449720 | 2_3:+6928596 | Msa0275020:CDS |
| CACAAATAAATAGGTGGAGC+TGG | 0.453665 | 2_3:-6935054 | None:intergenic |
| GGCTTCCTGGTTAGGAATGA+TGG | 0.454099 | 2_3:+6933310 | Msa0275020:CDS |
| CGAATTCTCGAAGTCGCGTT+GGG | 0.455314 | 2_3:+6934427 | Msa0275020:CDS |
| GCCGAAAACGAAGATATTGA+TGG | 0.465396 | 2_3:+6934849 | Msa0275020:CDS |
| TACATGCTGGCTTCCTGGTT+AGG | 0.466059 | 2_3:+6933302 | Msa0275020:CDS |
| CTATCTTAATTATGAGTGGT+TGG | 0.471153 | 2_3:-6934926 | None:intergenic |
| GTTCAGATCTGATGGTGGTT+CGG | 0.478100 | 2_3:-6934904 | None:intergenic |
| GTCTGCTTTGGATAAAGCCT+TGG | 0.478171 | 2_3:+6934827 | Msa0275020:CDS |
| GATGGTGGTTCGGCAACAAT+TGG | 0.478254 | 2_3:-6934894 | None:intergenic |
| GAGTCGGCAACAAAGCCAAC+TGG | 0.478879 | 2_3:-6931422 | None:intergenic |
| GCAATTGCAATACGGAGATC+TGG | 0.486740 | 2_3:+6931737 | Msa0275020:CDS |
| TCAAACCTGGCAAATCTTGG+AGG | 0.489939 | 2_3:+6928411 | Msa0275020:five_prime_UTR |
| TTCACTTGTGGAATACATGC+TGG | 0.495330 | 2_3:+6933289 | Msa0275020:CDS |
| TTTCGGTGTGTAGATTATGA+AGG | 0.495881 | 2_3:+6928744 | Msa0275020:intron |
| ACAAACTATATTTCTAATGT+AGG | 0.499499 | 2_3:-6935089 | None:intergenic |
| GATCCTGAAGGCAGAAGCCC+AGG | 0.500493 | 2_3:-6928532 | None:intergenic |
| AAGATGAAGAAGATCGGAAA+GGG | 0.500632 | 2_3:-6928250 | None:intergenic |
| TATGAAGGACTTTCTACTAT+GGG | 0.500714 | 2_3:+6928759 | Msa0275020:CDS |
| AATCAGTGGCAATTGCAATA+CGG | 0.503214 | 2_3:+6931729 | Msa0275020:CDS |
| GATCGTGATCTTGGGGCATG+GGG | 0.506242 | 2_3:+6928784 | Msa0275020:CDS |
| AAGAAGAAGATGAAGAAGAT+CGG | 0.507957 | 2_3:-6928256 | None:intergenic |
| TTAATCCTCCAAGATTTGCC+AGG | 0.508246 | 2_3:-6928416 | None:intergenic |
| CGACAATAACAGCAAGAAGA+AGG | 0.509391 | 2_3:-6928569 | None:intergenic |
| TTTCATTTGGTTATACGCGT+TGG | 0.512420 | 2_3:-6928216 | None:intergenic |
| ACGCTGGCACTTGTATATGT+TGG | 0.514411 | 2_3:+6934362 | Msa0275020:CDS |
| TTAGAAATATAGTTTGTGAC+AGG | 0.521545 | 2_3:+6935095 | Msa0275020:three_prime_UTR |
| ATAGGTGCAACTGTTGGTGC+AGG | 0.523128 | 2_3:+6931446 | Msa0275020:CDS |
| GGTGACTCCTGTTTCACTTG+TGG | 0.532053 | 2_3:+6933277 | Msa0275020:CDS |
| CCGAAAACGAAGATATTGAT+GGG | 0.535121 | 2_3:+6934850 | Msa0275020:CDS |
| CTTACAGTAAGAACTGAAGC+TGG | 0.538772 | 2_3:-6929899 | None:intergenic |
| TTTCTGACGTAACACATGGT+TGG | 0.540271 | 2_3:+6934402 | Msa0275020:CDS |
| TGAAGAAGATCGGAAAGGGT+AGG | 0.546544 | 2_3:-6928246 | None:intergenic |
| TACATTATTGACTATGTCGA+AGG | 0.546604 | 2_3:+6935142 | Msa0275020:three_prime_UTR |
| AAGACGAAGAGTGTCGTCCT+TGG | 0.550809 | 2_3:+6928484 | Msa0275020:five_prime_UTR |
| ACGAATTCTCGAAGTCGCGT+TGG | 0.553958 | 2_3:+6934426 | Msa0275020:CDS |
| GGAACTGCCAAGACAGTCAA+AGG | 0.561158 | 2_3:-6929878 | None:intergenic |
| TTCAACCTAGAAACAACAAA+CGG | 0.564771 | 2_3:-6931689 | None:intergenic |
| GAAGATGAAGAAGATCGGAA+AGG | 0.567524 | 2_3:-6928251 | None:intergenic |
| TTATCCAAAATTTAAATCAG+TGG | 0.572801 | 2_3:+6931715 | Msa0275020:CDS |
| GTCTTCGTCGGTTAAATCAA+GGG | 0.573079 | 2_3:-6928466 | None:intergenic |
| GAAAGAGAAAATTTCAAACC+TGG | 0.577636 | 2_3:+6928398 | Msa0275020:five_prime_UTR |
| AGTGGTTGGTTCAGATCTGA+TGG | 0.580099 | 2_3:-6934912 | None:intergenic |
| GACTCTATAGGTGCAACTGT+TGG | 0.588435 | 2_3:+6931440 | Msa0275020:CDS |
| AACAGTTGCACCTATAGAGT+CGG | 0.598958 | 2_3:-6931438 | None:intergenic |
| ACGACACTCTTCGTCTTCGT+CGG | 0.599770 | 2_3:-6928478 | None:intergenic |
| ATGGGTTGATCGTGATCTTG+GGG | 0.603265 | 2_3:+6928777 | Msa0275020:CDS |
| ATGGTGAATCTTCGACGCCA+AGG | 0.606150 | 2_3:-6928501 | None:intergenic |
| TCGGCAACAATTGGTAACTC+CGG | 0.609989 | 2_3:-6934885 | None:intergenic |
| GAATCTATCTTAATTATGAG+TGG | 0.610315 | 2_3:-6934930 | None:intergenic |
| TGATGGGGTTACATCCTCAC+CGG | 0.611778 | 2_3:+6934866 | Msa0275020:CDS |
| TCGTCGGTTAAATCAAGGGA+AGG | 0.616931 | 2_3:-6928462 | None:intergenic |
| ATTATTGCAGCCAATAACGC+TGG | 0.617544 | 2_3:+6934346 | Msa0275020:intron |
| AAACTGACTTACAAAACAAG+TGG | 0.618122 | 2_3:-6928808 | None:intergenic |
| GTATACCATCATTCCTAACC+AGG | 0.618303 | 2_3:-6933315 | None:intergenic |
| AAGAAGAAGAGTGATCCTGA+AGG | 0.621372 | 2_3:-6928544 | None:intergenic |
| ACAAATCACAAATAAATAGG+TGG | 0.636407 | 2_3:-6935060 | None:intergenic |
| GATCTTTCTGACGTAACACA+TGG | 0.637770 | 2_3:+6934398 | Msa0275020:CDS |
| AACATGTTAAATGGTAGCAG+CGG | 0.643337 | 2_3:-6933239 | None:intergenic |
| AAAACATCAACTATGAGGAG+AGG | 0.647989 | 2_3:-6935004 | None:intergenic |
| ATCGTGATCTTGGGGCATGG+GGG | 0.666220 | 2_3:+6928785 | Msa0275020:CDS |
| GGTTGGTTCAGATCTGATGG+TGG | 0.668075 | 2_3:-6934909 | None:intergenic |
| AACAATTGGTAACTCCGGTG+AGG | 0.687055 | 2_3:-6934880 | None:intergenic |
| CGAAAACGAAGATATTGATG+GGG | 0.696254 | 2_3:+6934851 | Msa0275020:CDS |
| TTGGCGTCGAAGATTCACCA+TGG | 0.705965 | 2_3:+6928503 | Msa0275020:exon |
| AAGGAACGGAAACACCAGTG+TGG | 0.717500 | 2_3:-6935217 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGTTATAAATAATTGTAAT+TGG | + | chr2_3:6928910-6928929 | Msa0275020:intron | 10.0% |
| !!! | ATTTTACAATATAACAAATT+AGG | + | chr2_3:6930204-6930223 | Msa0275020:intron | 10.0% |
| !!! | AAATGTGAATAATTTTTTTT+TGG | + | chr2_3:6932099-6932118 | Msa0275020:intron | 10.0% |
| !!! | AATGTGAATAATTTTTTTTT+GGG | + | chr2_3:6932100-6932119 | Msa0275020:intron | 10.0% |
| !!! | TAAAAAATAGTTTTTCATTT+TGG | + | chr2_3:6932431-6932450 | Msa0275020:intron | 10.0% |
| !! | AATATTTATTTATTGTTTAG+TGG | + | chr2_3:6932838-6932857 | Msa0275020:intron | 10.0% |
| !!! | TTATTTAAGGTTTATGTTTT+AGG | - | chr2_3:6928349-6928368 | None:intergenic | 15.0% |
| !!! | AAAAATGCAGTTTTTATTTA+AGG | - | chr2_3:6928362-6928381 | None:intergenic | 15.0% |
| !!! | ATTCATAACTCAATATTTTT+TGG | + | chr2_3:6929829-6929848 | Msa0275020:intron | 15.0% |
| !! | AAATGGTAATTGAATAAATA+GGG | - | chr2_3:6930388-6930407 | None:intergenic | 15.0% |
| !! | TATAGTTAAAGTTAATACAA+GGG | - | chr2_3:6931036-6931055 | None:intergenic | 15.0% |
| !! | TTATAGTTAAAGTTAATACA+AGG | - | chr2_3:6931037-6931056 | None:intergenic | 15.0% |
| !!! | TTATTTTTGAAAATTCGTAA+CGG | - | chr2_3:6932330-6932349 | None:intergenic | 15.0% |
| !!! | AAATAGTTTTATAAAACCTA+GGG | - | chr2_3:6933014-6933033 | None:intergenic | 15.0% |
| !!! | TAAATAGTTTTATAAAACCT+AGG | - | chr2_3:6933015-6933034 | None:intergenic | 15.0% |
| !! | TATGATAAAAAATAACTGAT+AGG | - | chr2_3:6933154-6933173 | None:intergenic | 15.0% |
| !! | AGATAATTTAACATGTTAAA+TGG | - | chr2_3:6933251-6933270 | None:intergenic | 15.0% |
| !!! | ACTAAGAAATAAGAATTTTA+TGG | - | chr2_3:6934185-6934204 | None:intergenic | 15.0% |
| !!! | AAACATCAAAGTATCAATAA+GGG | - | chr2_3:6928715-6928734 | None:intergenic | 20.0% |
| !!! | AAAACATCAAAGTATCAATA+AGG | - | chr2_3:6928716-6928735 | None:intergenic | 20.0% |
| !!! | TGATGTTTTTCATGTTTTTT+CGG | + | chr2_3:6928727-6928746 | Msa0275020:intron | 20.0% |
| !! | TGGTATATGATAAAACATTA+TGG | + | chr2_3:6929182-6929201 | Msa0275020:intron | 20.0% |
| !! | TTTAGTATAATTGCAATTGA+TGG | + | chr2_3:6929309-6929328 | Msa0275020:intron | 20.0% |
| !!! | ATTCAATCTTCAATTTGTTA+GGG | + | chr2_3:6929580-6929599 | Msa0275020:intron | 20.0% |
| !!! | TTTCTTTTTTGGAAAAAAGT+AGG | + | chr2_3:6929747-6929766 | Msa0275020:intron | 20.0% |
| !! | TAACATATTGATCTTAATTG+TGG | + | chr2_3:6929777-6929796 | Msa0275020:intron | 20.0% |
| !! | AATTGTATTGTATCTTCTTT+AGG | + | chr2_3:6930048-6930067 | Msa0275020:intron | 20.0% |
| !! | AGGAAATAAAACATAAGATA+AGG | + | chr2_3:6930224-6930243 | Msa0275020:intron | 20.0% |
| !! | AAATAGGGAATTGTTTATTT+GGG | - | chr2_3:6930373-6930392 | None:intergenic | 20.0% |
| !! | TAAATAGGGAATTGTTTATT+TGG | - | chr2_3:6930374-6930393 | None:intergenic | 20.0% |
| !! | CAAATGGTAATTGAATAAAT+AGG | - | chr2_3:6930389-6930408 | None:intergenic | 20.0% |
| !!! | CTTTTTGATATCGTTATTTT+CGG | + | chr2_3:6931244-6931263 | Msa0275020:intron | 20.0% |
| !! | TTATCCAAAATTTAAATCAG+TGG | + | chr2_3:6931715-6931734 | Msa0275020:CDS | 20.0% |
| !! | AATCAAGACTAAATTTGAAA+TGG | - | chr2_3:6931816-6931835 | None:intergenic | 20.0% |
| !!! | TGAATTTGGTGTATAATTAA+GGG | + | chr2_3:6931890-6931909 | Msa0275020:intron | 20.0% |
| !! | TTACCATTAAAATTTAACAG+GGG | - | chr2_3:6931964-6931983 | None:intergenic | 20.0% |
| !! | CTTACCATTAAAATTTAACA+GGG | - | chr2_3:6931965-6931984 | None:intergenic | 20.0% |
| !! | ACTTACCATTAAAATTTAAC+AGG | - | chr2_3:6931966-6931985 | None:intergenic | 20.0% |
| !!! | TTGCAAAAAGTTTTCAAAAT+AGG | - | chr2_3:6932026-6932045 | None:intergenic | 20.0% |
| !!! | ATTTTATAAGGACTATTTTG+AGG | - | chr2_3:6932066-6932085 | None:intergenic | 20.0% |
| !!! | TGCTTAGTTTTTATTTTAAC+AGG | - | chr2_3:6932204-6932223 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTTTGTCACAAG+CGG | - | chr2_3:6932256-6932275 | None:intergenic | 20.0% |
| !!! | AGTTATCAAAAATGATTTTC+TGG | - | chr2_3:6932402-6932421 | None:intergenic | 20.0% |
| !!! | TTTTTATAATCCACAACTAA+CGG | + | chr2_3:6932523-6932542 | Msa0275020:intron | 20.0% |
| !! | CAAGAATACTTTCTATTAAA+GGG | + | chr2_3:6932610-6932629 | Msa0275020:intron | 20.0% |
| !! | CTATATATCTATTAGTCATA+AGG | + | chr2_3:6932863-6932882 | Msa0275020:intron | 20.0% |
| !! | TTGAAATCTCTTATATCTAT+CGG | + | chr2_3:6933515-6933534 | Msa0275020:intron | 20.0% |
| !! | TTATTTAGGTACAAAATGAA+AGG | - | chr2_3:6933548-6933567 | None:intergenic | 20.0% |
| !!! | TGGAATTCATCTATATTTTA+TGG | - | chr2_3:6933962-6933981 | None:intergenic | 20.0% |
| !! | ATTATTCTTGTTGCATATTT+GGG | + | chr2_3:6934218-6934237 | Msa0275020:intron | 20.0% |
| !! | TATTAACATATTGCTGTAAT+TGG | - | chr2_3:6934314-6934333 | None:intergenic | 20.0% |
| !!! | TTTTCTTAATCAGATCAATT+AGG | + | chr2_3:6934556-6934575 | Msa0275020:intron | 20.0% |
| !!! | TAAGCATTAATTTAAGTTCT+CGG | + | chr2_3:6934750-6934769 | Msa0275020:intron | 20.0% |
| !! | TGTACAAATCACAAATAAAT+AGG | - | chr2_3:6935066-6935085 | None:intergenic | 20.0% |
| !!! | ACAAACTATATTTCTAATGT+AGG | - | chr2_3:6935092-6935111 | None:intergenic | 20.0% |
| !! | AAAAAGCAAACCTTTTCAAT+AGG | - | chr2_3:6928609-6928628 | None:intergenic | 25.0% |
| ! | ATCGAATAGAAAATCCAAAA+GGG | - | chr2_3:6928639-6928658 | None:intergenic | 25.0% |
| ! | AATCGAATAGAAAATCCAAA+AGG | - | chr2_3:6928640-6928659 | None:intergenic | 25.0% |
| !!! | TTTCTATTCGATTTTGATTC+TGG | + | chr2_3:6928647-6928666 | Msa0275020:intron | 25.0% |
| !!! | TTCTATTCGATTTTGATTCT+GGG | + | chr2_3:6928648-6928667 | Msa0275020:intron | 25.0% |
| !!! | CTCTAAAATTGACATATTGT+CGG | + | chr2_3:6928843-6928862 | Msa0275020:intron | 25.0% |
| ! | AAATTACTACATTAGAGAGT+TGG | + | chr2_3:6928970-6928989 | Msa0275020:intron | 25.0% |
| ! | AATTACTACATTAGAGAGTT+GGG | + | chr2_3:6928971-6928990 | Msa0275020:intron | 25.0% |
| ! | TGAATGAATTGGATAGAAAA+TGG | + | chr2_3:6929162-6929181 | Msa0275020:intron | 25.0% |
| ! | AAACTTCACAAATTGAAACA+AGG | - | chr2_3:6929292-6929311 | None:intergenic | 25.0% |
| !!! | TTGTAGTTCTAACATCATTT+AGG | + | chr2_3:6929437-6929456 | Msa0275020:intron | 25.0% |
| !!! | CTAACATCATTTAGGTTTTA+TGG | + | chr2_3:6929445-6929464 | Msa0275020:intron | 25.0% |
| !! | GATTCAATCTTCAATTTGTT+AGG | + | chr2_3:6929579-6929598 | Msa0275020:intron | 25.0% |
| ! | TATACTTGAAGTAGAGTTAT+TGG | + | chr2_3:6929621-6929640 | Msa0275020:intron | 25.0% |
| ! | TGATTGTATTGTTCCAAATT+TGG | + | chr2_3:6929708-6929727 | Msa0275020:intron | 25.0% |
| !! | CTTTTGTAGGTTTTCTTTTT+TGG | + | chr2_3:6929736-6929755 | Msa0275020:intron | 25.0% |
| !!! | CATAACTCAATATTTTTTGG+TGG | + | chr2_3:6929832-6929851 | Msa0275020:intron | 25.0% |
| !!! | AATATTTTTTGGTGGTTTTC+AGG | + | chr2_3:6929840-6929859 | Msa0275020:intron | 25.0% |
| !!! | ATATTTTTTGGTGGTTTTCA+GGG | + | chr2_3:6929841-6929860 | Msa0275020:intron | 25.0% |
| !! | ACTAAGAACTATTGTTACTT+TGG | + | chr2_3:6929923-6929942 | Msa0275020:intron | 25.0% |
| ! | TTCAAAACTGAATTCATCAT+GGG | + | chr2_3:6930081-6930100 | Msa0275020:intron | 25.0% |
| ! | TCAGACAGTATAATGTTATT+AGG | - | chr2_3:6930427-6930446 | None:intergenic | 25.0% |
| ! | ATAACATTATACTGTCTGAT+TGG | + | chr2_3:6930428-6930447 | Msa0275020:intron | 25.0% |
| ! | ATATTAGTAAACATTACGAG+AGG | - | chr2_3:6930485-6930504 | None:intergenic | 25.0% |
| ! | TCGTAATGTTTACTAATATG+TGG | + | chr2_3:6930486-6930505 | Msa0275020:intron | 25.0% |
| !! | TACTTCTTTTGACAATTTCA+GGG | - | chr2_3:6930680-6930699 | None:intergenic | 25.0% |
| !! | ATACTTCTTTTGACAATTTC+AGG | - | chr2_3:6930681-6930700 | None:intergenic | 25.0% |
| ! | TTTAAATAATGAGAACAGAG+AGG | + | chr2_3:6930914-6930933 | Msa0275020:intron | 25.0% |
| ! | TTAAATAATGAGAACAGAGA+GGG | + | chr2_3:6930915-6930934 | Msa0275020:intron | 25.0% |
| !! | AAGTCAATCATTTTCTTCAA+TGG | + | chr2_3:6931065-6931084 | Msa0275020:intron | 25.0% |
| ! | AAAATGCATTGTAATAGAGA+TGG | - | chr2_3:6931305-6931324 | None:intergenic | 25.0% |
| !! | AGGTTTTTCTTGATTAAAAC+AGG | + | chr2_3:6931580-6931599 | Msa0275020:intron | 25.0% |
| !! | GGTTTTTCTTGATTAAAACA+GGG | + | chr2_3:6931581-6931600 | Msa0275020:intron | 25.0% |
| ! | ATTTAAATAAGTAACCTCAC+AGG | - | chr2_3:6931642-6931661 | None:intergenic | 25.0% |
| !!! | ATTGCCACTGATTTAAATTT+TGG | - | chr2_3:6931722-6931741 | None:intergenic | 25.0% |
| !! | GTTAATTTTCTCAAGTCTTT+TGG | + | chr2_3:6931786-6931805 | Msa0275020:intron | 25.0% |
| ! | ATACACCAAATTCACAAAAA+CGG | - | chr2_3:6931884-6931903 | None:intergenic | 25.0% |
| !!! | GTGAATTTGGTGTATAATTA+AGG | + | chr2_3:6931889-6931908 | Msa0275020:intron | 25.0% |
| ! | TCTTACAAACTGCAATATTA+TGG | - | chr2_3:6931997-6932016 | None:intergenic | 25.0% |
| ! | AATATTGCAGTTTGTAAGAA+TGG | + | chr2_3:6931998-6932017 | Msa0275020:intron | 25.0% |
| !! | TTGAAAACTTTTTGCAAAAC+TGG | + | chr2_3:6932029-6932048 | Msa0275020:intron | 25.0% |
| ! | AGTCCTTATAAAATGCAAAT+AGG | + | chr2_3:6932072-6932091 | Msa0275020:intron | 25.0% |
| ! | GTCCTTATAAAATGCAAATA+GGG | + | chr2_3:6932073-6932092 | Msa0275020:intron | 25.0% |
| !!! | TTTTTTTTTTTGTCACAAGC+GGG | - | chr2_3:6932255-6932274 | None:intergenic | 25.0% |
| !! | TTTTATAATCCACAACTAAC+GGG | + | chr2_3:6932524-6932543 | Msa0275020:intron | 25.0% |
| ! | TTAGTTTAATTGCCAATCAA+TGG | - | chr2_3:6932561-6932580 | None:intergenic | 25.0% |
| ! | GCAAGAATACTTTCTATTAA+AGG | + | chr2_3:6932609-6932628 | Msa0275020:intron | 25.0% |
| !! | TATAGTATAATTTTGTGCAG+TGG | - | chr2_3:6932772-6932791 | None:intergenic | 25.0% |
| ! | CATGTTAAATTATCTCTTGT+CGG | + | chr2_3:6933256-6933275 | Msa0275020:CDS | 25.0% |
| ! | TCGGATATATAATTGTTCAA+GGG | - | chr2_3:6933347-6933366 | None:intergenic | 25.0% |
| ! | TTTATCATTTGGAGAATTCT+CGG | - | chr2_3:6933366-6933385 | None:intergenic | 25.0% |
| ! | CACAATAGAAGTTTATCATT+TGG | - | chr2_3:6933377-6933396 | None:intergenic | 25.0% |
| ! | TATTGTGCTTTATGATTTCT+AGG | + | chr2_3:6933390-6933409 | Msa0275020:intron | 25.0% |
| ! | AACACATTACACATATTTCA+TGG | + | chr2_3:6933591-6933610 | Msa0275020:intron | 25.0% |
| !! | CATAATTTGCGTTAATAGTT+CGG | - | chr2_3:6933775-6933794 | None:intergenic | 25.0% |
| !! | ATGCATATTGTGAAATGTTT+TGG | + | chr2_3:6933916-6933935 | Msa0275020:intron | 25.0% |
| !!! | ATATTTTTTAGGCAGATAGA+TGG | + | chr2_3:6934016-6934035 | Msa0275020:intron | 25.0% |
| ! | CATTATTCTTGTTGCATATT+TGG | + | chr2_3:6934217-6934236 | Msa0275020:intron | 25.0% |
| !!! | ATTTAAGTTCTCGGTTATTT+TGG | + | chr2_3:6934759-6934778 | Msa0275020:intron | 25.0% |
| !!! | TTTAAGTTCTCGGTTATTTT+GGG | + | chr2_3:6934760-6934779 | Msa0275020:intron | 25.0% |
| ! | GAATCTATCTTAATTATGAG+TGG | - | chr2_3:6934933-6934952 | None:intergenic | 25.0% |
| ! | AAGAAAAAACATCAACTATG+AGG | - | chr2_3:6935012-6935031 | None:intergenic | 25.0% |
| ! | ACAAATCACAAATAAATAGG+TGG | - | chr2_3:6935063-6935082 | None:intergenic | 25.0% |
| !! | TTAGAAATATAGTTTGTGAC+AGG | + | chr2_3:6935095-6935114 | Msa0275020:three_prime_UTR | 25.0% |
| ! | AATAATGTAATCTTGGTTGT+AGG | - | chr2_3:6935131-6935150 | None:intergenic | 25.0% |
| ! | CATAGTCAATAATGTAATCT+TGG | - | chr2_3:6935138-6935157 | None:intergenic | 25.0% |
| ! | CAAAATGATTTAAGAGAATC+AGG | - | chr2_3:6935191-6935210 | None:intergenic | 25.0% |
| AAGAAGAAGATGAAGAAGAT+CGG | - | chr2_3:6928259-6928278 | None:intergenic | 30.0% | |
| ! | TTAGGATACGACATTGATTA+AGG | - | chr2_3:6928331-6928350 | None:intergenic | 30.0% |
| GAAAGAGAAAATTTCAAACC+TGG | + | chr2_3:6928398-6928417 | Msa0275020:five_prime_UTR | 30.0% | |
| TTTCACTCTTCCTATTGAAA+AGG | + | chr2_3:6928596-6928615 | Msa0275020:CDS | 30.0% | |
| TCGAATAGAAAATCCAAAAG+GGG | - | chr2_3:6928638-6928657 | None:intergenic | 30.0% | |
| TTATGAAGGACTTTCTACTA+TGG | + | chr2_3:6928758-6928777 | Msa0275020:CDS | 30.0% | |
| TATGAAGGACTTTCTACTAT+GGG | + | chr2_3:6928759-6928778 | Msa0275020:CDS | 30.0% | |
| ! | AAACTGACTTACAAAACAAG+TGG | - | chr2_3:6928811-6928830 | None:intergenic | 30.0% |
| TAACTACACAGATTGAAACA+AGG | - | chr2_3:6928896-6928915 | None:intergenic | 30.0% | |
| AATTATTTGCGAAGACTAGA+TGG | + | chr2_3:6928936-6928955 | Msa0275020:intron | 30.0% | |
| ATTATTTGCGAAGACTAGAT+GGG | + | chr2_3:6928937-6928956 | Msa0275020:intron | 30.0% | |
| ATTACTACATTAGAGAGTTG+GGG | + | chr2_3:6928972-6928991 | Msa0275020:intron | 30.0% | |
| AGATCTAGAGATGAATGAAT+TGG | + | chr2_3:6929151-6929170 | Msa0275020:intron | 30.0% | |
| GTATTGTTCCAAATTTGGAA+AGG | + | chr2_3:6929713-6929732 | Msa0275020:intron | 30.0% | |
| TACAAAAGCCTTTCCAAATT+TGG | - | chr2_3:6929724-6929743 | None:intergenic | 30.0% | |
| ! | AAATTTGGAAAGGCTTTTGT+AGG | + | chr2_3:6929723-6929742 | Msa0275020:intron | 30.0% |
| !!! | CTTTTTTGGAAAAAAGTAGG+AGG | + | chr2_3:6929750-6929769 | Msa0275020:intron | 30.0% |
| TGATCTTAATTGTGGTTCTT+TGG | + | chr2_3:6929785-6929804 | Msa0275020:intron | 30.0% | |
| GATCTTAATTGTGGTTCTTT+GGG | + | chr2_3:6929786-6929805 | Msa0275020:intron | 30.0% | |
| CGGATATAAACAATTTATGC+TGG | - | chr2_3:6929997-6930016 | None:intergenic | 30.0% | |
| GTTCAAAACTGAATTCATCA+TGG | + | chr2_3:6930080-6930099 | Msa0275020:intron | 30.0% | |
| ! | CATGGGTTATCATATAGAAA+CGG | + | chr2_3:6930098-6930117 | Msa0275020:intron | 30.0% |
| ! | ATGGGTTATCATATAGAAAC+GGG | + | chr2_3:6930099-6930118 | Msa0275020:intron | 30.0% |
| TTTATTGAGTGGTTATGAGA+GGG | - | chr2_3:6930342-6930361 | None:intergenic | 30.0% | |
| ATTTATTGAGTGGTTATGAG+AGG | - | chr2_3:6930343-6930362 | None:intergenic | 30.0% | |
| GACAGTATAATGTTATTAGG+CGG | - | chr2_3:6930424-6930443 | None:intergenic | 30.0% | |
| ! | ACTTCTTTTGACAATTTCAG+GGG | - | chr2_3:6930679-6930698 | None:intergenic | 30.0% |
| TGACAGACAATAACACTTAT+CGG | + | chr2_3:6930738-6930757 | Msa0275020:intron | 30.0% | |
| TGATAGTTTAGAAATGTCAG+TGG | - | chr2_3:6930776-6930795 | None:intergenic | 30.0% | |
| TGATAAGAACCAGACATTAT+TGG | - | chr2_3:6930824-6930843 | None:intergenic | 30.0% | |
| GTTAAAGTTAATACAAGGGA+TGG | - | chr2_3:6931032-6931051 | None:intergenic | 30.0% | |
| TTGTATTCAGTTTGTAACTC+AGG | + | chr2_3:6931102-6931121 | Msa0275020:intron | 30.0% | |
| ! | TTTTCTTGATTAAAACAGGG+TGG | + | chr2_3:6931584-6931603 | Msa0275020:intron | 30.0% |
| TGTTGTCAAATTCTACAGAT+TGG | + | chr2_3:6931662-6931681 | Msa0275020:intron | 30.0% | |
| TTCAACCTAGAAACAACAAA+CGG | - | chr2_3:6931692-6931711 | None:intergenic | 30.0% | |
| AAGGTTTGTAGACTTCTTAT+TGG | + | chr2_3:6931764-6931783 | Msa0275020:intron | 30.0% | |
| ! | CTTGATTTTACCTTGTACAT+AGG | + | chr2_3:6931829-6931848 | Msa0275020:intron | 30.0% |
| !! | CTAAACCGTTTTTGTGAATT+TGG | + | chr2_3:6931876-6931895 | Msa0275020:intron | 30.0% |
| ! | TAGCCCCTGTTAAATTTTAA+TGG | + | chr2_3:6931958-6931977 | Msa0275020:intron | 30.0% |
| TACAAACTGCAATATTATGG+AGG | - | chr2_3:6931994-6932013 | None:intergenic | 30.0% | |
| ! | GTCCCTATTTGCATTTTATA+AGG | - | chr2_3:6932078-6932097 | None:intergenic | 30.0% |
| ! | TTGAAAGCTCATGATTTTGT+AGG | + | chr2_3:6932130-6932149 | Msa0275020:intron | 30.0% |
| ! | TGAAAGCTCATGATTTTGTA+GGG | + | chr2_3:6932131-6932150 | Msa0275020:intron | 30.0% |
| AACTAACAAAAAACCGTGAT+CGG | + | chr2_3:6932575-6932594 | Msa0275020:intron | 30.0% | |
| ! | TATGTTGGTTAATGTTACTG+AGG | + | chr2_3:6932641-6932660 | Msa0275020:intron | 30.0% |
| CAAACAAATTATACACTGCA+TGG | - | chr2_3:6932716-6932735 | None:intergenic | 30.0% | |
| TATTAGTCATAAGGATCCTT+TGG | + | chr2_3:6932872-6932891 | Msa0275020:intron | 30.0% | |
| ATTAGTCATAAGGATCCTTT+GGG | + | chr2_3:6932873-6932892 | Msa0275020:intron | 30.0% | |
| ! | TATAACATGCATCTGATTTG+AGG | + | chr2_3:6932904-6932923 | Msa0275020:intron | 30.0% |
| CATATAGCTGGATAAGATAA+AGG | - | chr2_3:6932943-6932962 | None:intergenic | 30.0% | |
| CTTTATCTTATCCAGCTATA+TGG | + | chr2_3:6932941-6932960 | Msa0275020:intron | 30.0% | |
| AATGTCACAAAATAAGCCAT+TGG | - | chr2_3:6933052-6933071 | None:intergenic | 30.0% | |
| !! | CATTTTGTTTGTACATGACT+TGG | + | chr2_3:6933116-6933135 | Msa0275020:intron | 30.0% |
| ACAATCTGTAAGGACAAATA+AGG | - | chr2_3:6933200-6933219 | None:intergenic | 30.0% | |
| AAGCAGTAATACAATCTGTA+AGG | - | chr2_3:6933210-6933229 | None:intergenic | 30.0% | |
| TACAGATTGTATTACTGCTT+CGG | + | chr2_3:6933210-6933229 | Msa0275020:intron | 30.0% | |
| CTCGGATATATAATTGTTCA+AGG | - | chr2_3:6933348-6933367 | None:intergenic | 30.0% | |
| TTGCTAAAAGAAATCCAATC+AGG | - | chr2_3:6933425-6933444 | None:intergenic | 30.0% | |
| CTGTTTACTAAAAGATGCAT+AGG | + | chr2_3:6933458-6933477 | Msa0275020:intron | 30.0% | |
| GATTTCAAGATAGCTTTCAA+AGG | - | chr2_3:6933503-6933522 | None:intergenic | 30.0% | |
| !!! | ACACTGGCTCTTTTTTATTT+AGG | - | chr2_3:6933562-6933581 | None:intergenic | 30.0% |
| CGAACTATTAACGCAAATTA+TGG | + | chr2_3:6933773-6933792 | Msa0275020:intron | 30.0% | |
| ! | TTTTGGATTTTGCTTTACGA+TGG | + | chr2_3:6933933-6933952 | Msa0275020:intron | 30.0% |
| ! | TTTGGATTTTGCTTTACGAT+GGG | + | chr2_3:6933934-6933953 | Msa0275020:intron | 30.0% |
| !!! | ATGACTGTGGCATATTTTTT+AGG | + | chr2_3:6934005-6934024 | Msa0275020:intron | 30.0% |
| !!! | ACATTCAATTAGCTTTTGCA+AGG | + | chr2_3:6934045-6934064 | Msa0275020:intron | 30.0% |
| TGGTATATATGATTGTGTGT+CGG | + | chr2_3:6934083-6934102 | Msa0275020:intron | 30.0% | |
| CAACAAGAATAATGACAGAT+AGG | - | chr2_3:6934211-6934230 | None:intergenic | 30.0% | |
| TAGTGAGCTGTAAAAACATA+TGG | - | chr2_3:6934286-6934305 | None:intergenic | 30.0% | |
| ATATGTTGGAACAACTCTTA+AGG | + | chr2_3:6934376-6934395 | Msa0275020:CDS | 30.0% | |
| GATGTTCATCAGTAAGTATA+AGG | - | chr2_3:6934509-6934528 | None:intergenic | 30.0% | |
| ATGCAGGCATTTATCATTAT+TGG | + | chr2_3:6934634-6934653 | Msa0275020:intron | 30.0% | |
| ! | ATTATTGGTCTCATAGTATC+AGG | + | chr2_3:6934649-6934668 | Msa0275020:CDS | 30.0% |
| CTATCTTAATTATGAGTGGT+TGG | - | chr2_3:6934929-6934948 | None:intergenic | 30.0% | |
| ! | TACATTATTGACTATGTCGA+AGG | + | chr2_3:6935142-6935161 | Msa0275020:three_prime_UTR | 30.0% |
| TTTCATTTGGTTATACGCGT+TGG | - | chr2_3:6928219-6928238 | None:intergenic | 35.0% | |
| ! | GGTAGGAGTGTAATTTCATT+TGG | - | chr2_3:6928232-6928251 | None:intergenic | 35.0% |
| AAGATGAAGAAGATCGGAAA+GGG | - | chr2_3:6928253-6928272 | None:intergenic | 35.0% | |
| ! | GTTTGTTGAGAACAGAGATT+CGG | - | chr2_3:6928284-6928303 | None:intergenic | 35.0% |
| ATTTCAAACCTGGCAAATCT+TGG | + | chr2_3:6928408-6928427 | Msa0275020:five_prime_UTR | 35.0% | |
| ! | TTTCGGTGTGTAGATTATGA+AGG | + | chr2_3:6928744-6928763 | Msa0275020:intron | 35.0% |
| ! | TGACATATTGTCGGAGATTT+TGG | + | chr2_3:6928852-6928871 | Msa0275020:intron | 35.0% |
| ! | GGTAACATCTAGAGTAGAAA+AGG | + | chr2_3:6928993-6929012 | Msa0275020:intron | 35.0% |
| ! | AACATCTAGAGTAGAAAAGG+TGG | + | chr2_3:6928996-6929015 | Msa0275020:intron | 35.0% |
| TAAACAACCTAAGCCTAGTT+TGG | - | chr2_3:6929023-6929042 | None:intergenic | 35.0% | |
| ! | AAACTAGGCTTAGGTTGTTT+AGG | + | chr2_3:6929022-6929041 | Msa0275020:intron | 35.0% |
| GGATAATTAGATCACTAGAG+AGG | + | chr2_3:6929098-6929117 | Msa0275020:intron | 35.0% | |
| CAACAACAACAACAACAATC+AGG | - | chr2_3:6929251-6929270 | None:intergenic | 35.0% | |
| !!! | TGATGGAGTTTTTTGTGAAG+AGG | + | chr2_3:6929326-6929345 | Msa0275020:intron | 35.0% |
| TGTGAAGAGGAAATATTGTG+TGG | + | chr2_3:6929339-6929358 | Msa0275020:intron | 35.0% | |
| CAACATCCTTATGTTAGCTA+CGG | - | chr2_3:6929420-6929439 | None:intergenic | 35.0% | |
| ! | AAACAATGCGATTTTTGACG+TGG | + | chr2_3:6929478-6929497 | Msa0275020:intron | 35.0% |
| TGAGCGTTCTTTAGATTGTA+AGG | + | chr2_3:6929662-6929681 | Msa0275020:intron | 35.0% | |
| AAGTATCAACACACATGACA+AGG | - | chr2_3:6929689-6929708 | None:intergenic | 35.0% | |
| TTACATTCCTTTGACTGTCT+TGG | + | chr2_3:6929871-6929890 | Msa0275020:CDS | 35.0% | |
| ACAATCCAAAGCAACATTGT+AGG | - | chr2_3:6930023-6930042 | None:intergenic | 35.0% | |
| !! | CATTCTCTGTTCTGAGATAA+CGG | - | chr2_3:6930180-6930199 | None:intergenic | 35.0% |
| AGAGATAGTCTACTGTTACA+AGG | + | chr2_3:6930249-6930268 | Msa0275020:intron | 35.0% | |
| !! | GACTCTAGAATTTCTTGGAT+AGG | - | chr2_3:6930280-6930299 | None:intergenic | 35.0% |
| !! | TCCAAGAAATTCTAGAGTCT+TGG | + | chr2_3:6930281-6930300 | Msa0275020:intron | 35.0% |
| !! | ACCAAGACTCTAGAATTTCT+TGG | - | chr2_3:6930285-6930304 | None:intergenic | 35.0% |
| CAAGATCTCTAATTCTTGGA+AGG | - | chr2_3:6930313-6930332 | None:intergenic | 35.0% | |
| CTTCCAAGAATTAGAGATCT+TGG | + | chr2_3:6930311-6930330 | Msa0275020:intron | 35.0% | |
| TGACCAAGATCTCTAATTCT+TGG | - | chr2_3:6930317-6930336 | None:intergenic | 35.0% | |
| ! | GGGAATTGTTTATTTGGGAT+CGG | - | chr2_3:6930368-6930387 | None:intergenic | 35.0% |
| ! | GCGGCAGTAATTTTATCAAA+TGG | - | chr2_3:6930405-6930424 | None:intergenic | 35.0% |
| AAATGTCAGTGGTAGATTTC+AGG | - | chr2_3:6930765-6930784 | None:intergenic | 35.0% | |
| !! | CTTGTTGTTCCAATAATGTC+TGG | + | chr2_3:6930812-6930831 | Msa0275020:intron | 35.0% |
| !! | AATGTCTGGTTCTTATCACA+TGG | + | chr2_3:6930826-6930845 | Msa0275020:intron | 35.0% |
| ACATGGAACTCAATGTCATT+CGG | + | chr2_3:6930843-6930862 | Msa0275020:intron | 35.0% | |
| CAGTTTGTAACTCAGGATAA+AGG | + | chr2_3:6931109-6931128 | Msa0275020:intron | 35.0% | |
| AGAGATGATTTCCTTATGCA+AGG | + | chr2_3:6931170-6931189 | Msa0275020:intron | 35.0% | |
| AAAATGCAAGTCCTTGCATA+AGG | - | chr2_3:6931184-6931203 | None:intergenic | 35.0% | |
| GAAGTGTGAAACGAATAGAA+GGG | - | chr2_3:6931276-6931295 | None:intergenic | 35.0% | |
| ! | AGAAGTGTGAAACGAATAGA+AGG | - | chr2_3:6931277-6931296 | None:intergenic | 35.0% |
| !!! | TTGGTGGTGGTTATCTTTTT+GGG | + | chr2_3:6931396-6931415 | Msa0275020:CDS | 35.0% |
| CTGCTGAATAGCTAAATGAT+AGG | + | chr2_3:6931560-6931579 | Msa0275020:intron | 35.0% | |
| GGGTGGTCTTCATTATATAA+CGG | + | chr2_3:6931601-6931620 | Msa0275020:intron | 35.0% | |
| !! | ATTGTTATTTGTGTCCTGTG+AGG | + | chr2_3:6931625-6931644 | Msa0275020:intron | 35.0% |
| !! | GTTTGTTGTTTCTAGGTTGA+AGG | + | chr2_3:6931691-6931710 | Msa0275020:CDS | 35.0% |
| AATCAGTGGCAATTGCAATA+CGG | + | chr2_3:6931729-6931748 | Msa0275020:CDS | 35.0% | |
| AAACAAGGATCCTATGTACA+AGG | - | chr2_3:6931842-6931861 | None:intergenic | 35.0% | |
| ! | TGAAAGCTTGCGATTTTGTA+GGG | - | chr2_3:6931933-6931952 | None:intergenic | 35.0% |
| ! | TTGAAAGCTTGCGATTTTGT+AGG | - | chr2_3:6931934-6931953 | None:intergenic | 35.0% |
| GATCTAAATGGACCATTGAT+TGG | + | chr2_3:6932546-6932565 | Msa0275020:intron | 35.0% | |
| GCTAATTTAACATCCGATCA+CGG | - | chr2_3:6932591-6932610 | None:intergenic | 35.0% | |
| ! | CTTTCTATTAAAGGGCATGT+AGG | + | chr2_3:6932618-6932637 | Msa0275020:intron | 35.0% |
| !! | CCACAGATAATTTCTGGTTT+AGG | - | chr2_3:6932671-6932690 | None:intergenic | 35.0% |
| CCTAAACCAGAAATTATCTG+TGG | + | chr2_3:6932668-6932687 | Msa0275020:intron | 35.0% | |
| TTAGTCATAAGGATCCTTTG+GGG | + | chr2_3:6932874-6932893 | Msa0275020:intron | 35.0% | |
| TGTTATAATTACTCCCCCAA+AGG | - | chr2_3:6932891-6932910 | None:intergenic | 35.0% | |
| TAGCTGGATAAGATAAAGGT+TGG | - | chr2_3:6932939-6932958 | None:intergenic | 35.0% | |
| TCTTATCCAGCTATATGGTT+TGG | + | chr2_3:6932946-6932965 | Msa0275020:intron | 35.0% | |
| CTTATCCAGCTATATGGTTT+GGG | + | chr2_3:6932947-6932966 | Msa0275020:intron | 35.0% | |
| TTATCCAGCTATATGGTTTG+GGG | + | chr2_3:6932948-6932967 | Msa0275020:intron | 35.0% | |
| AACATGTTAAATGGTAGCAG+CGG | - | chr2_3:6933242-6933261 | None:intergenic | 35.0% | |
| ATGTATTCCACAAGTGAAAC+AGG | - | chr2_3:6933287-6933306 | None:intergenic | 35.0% | |
| CTAGGTCATTTATACCTGAT+TGG | + | chr2_3:6933408-6933427 | Msa0275020:intron | 35.0% | |
| !!! | ATGTGTTTTTTATGCGACAC+TGG | - | chr2_3:6933578-6933597 | None:intergenic | 35.0% |
| !! | ATCAATAACGGATTGGCAAT+AGG | - | chr2_3:6933985-6934004 | None:intergenic | 35.0% |
| !! | CAGTCATATCAATAACGGAT+TGG | - | chr2_3:6933992-6934011 | None:intergenic | 35.0% |
| ATCCGTTATTGATATGACTG+TGG | + | chr2_3:6933992-6934011 | Msa0275020:intron | 35.0% | |
| TGCCACAGTCATATCAATAA+CGG | - | chr2_3:6933997-6934016 | None:intergenic | 35.0% | |
| ! | CAAGGAAGTGCATTTATTGT+TGG | + | chr2_3:6934063-6934082 | Msa0275020:intron | 35.0% |
| !! | TGTGTCGGTTGAATTTAAGT+TGG | + | chr2_3:6934098-6934117 | Msa0275020:intron | 35.0% |
| !! | GTGTCGGTTGAATTTAAGTT+GGG | + | chr2_3:6934099-6934118 | Msa0275020:intron | 35.0% |
| GAGCTGTAAAAACATATGGA+CGG | - | chr2_3:6934282-6934301 | None:intergenic | 35.0% | |
| GCTGCAATAATAACAGTATC+AGG | - | chr2_3:6934337-6934356 | None:intergenic | 35.0% | |
| !!! | TTATTTTGGGTTATGTGCAG+TGG | + | chr2_3:6934773-6934792 | Msa0275020:intron | 35.0% |
| ! | CCCATCAATATCTTCGTTTT+CGG | - | chr2_3:6934853-6934872 | None:intergenic | 35.0% |
| CCGAAAACGAAGATATTGAT+GGG | + | chr2_3:6934850-6934869 | Msa0275020:CDS | 35.0% | |
| CGAAAACGAAGATATTGATG+GGG | + | chr2_3:6934851-6934870 | Msa0275020:CDS | 35.0% | |
| AAAACATCAACTATGAGGAG+AGG | - | chr2_3:6935007-6935026 | None:intergenic | 35.0% | |
| GAAGATGAAGAAGATCGGAA+AGG | - | chr2_3:6928254-6928273 | None:intergenic | 40.0% | |
| TTAATCCTCCAAGATTTGCC+AGG | - | chr2_3:6928419-6928438 | None:intergenic | 40.0% | |
| TGGCAAATCTTGGAGGATTA+AGG | + | chr2_3:6928418-6928437 | Msa0275020:five_prime_UTR | 40.0% | |
| GGCAAATCTTGGAGGATTAA+GGG | + | chr2_3:6928419-6928438 | Msa0275020:five_prime_UTR | 40.0% | |
| ! | GTCTTCGTCGGTTAAATCAA+GGG | - | chr2_3:6928469-6928488 | None:intergenic | 40.0% |
| !! | ATTCACCATGGCTTTTTCCT+GGG | + | chr2_3:6928515-6928534 | Msa0275020:exon | 40.0% |
| AAGAAGAAGAGTGATCCTGA+AGG | - | chr2_3:6928547-6928566 | None:intergenic | 40.0% | |
| CGACAATAACAGCAAGAAGA+AGG | - | chr2_3:6928572-6928591 | None:intergenic | 40.0% | |
| !! | GCTTTTTCTCTTACCCCTTT+TGG | + | chr2_3:6928622-6928641 | Msa0275020:intron | 40.0% |
| !! | TATGGGTTGATCGTGATCTT+GGG | + | chr2_3:6928776-6928795 | Msa0275020:CDS | 40.0% |
| TAGAAAAGGTGGTCCAAACT+AGG | + | chr2_3:6929007-6929026 | Msa0275020:intron | 40.0% | |
| GACCTGTAGATGCTTTAGTA+AGG | + | chr2_3:6929058-6929077 | Msa0275020:intron | 40.0% | |
| ! | CTCCTTACTAAAGCATCTAC+AGG | - | chr2_3:6929063-6929082 | None:intergenic | 40.0% |
| ! | AGTAAGGAGCGTATATCAGA+TGG | + | chr2_3:6929074-6929093 | Msa0275020:intron | 40.0% |
| TTAGATCACTAGAGAGGCAA+AGG | + | chr2_3:6929104-6929123 | Msa0275020:intron | 40.0% | |
| GAAGAGGAAATATTGTGTGG+CGG | + | chr2_3:6929342-6929361 | Msa0275020:intron | 40.0% | |
| ACTGTTCCGTAGCTAACATA+AGG | + | chr2_3:6929411-6929430 | Msa0275020:intron | 40.0% | |
| ! | GATTTTTGACGTGGTTAAGC+TGG | + | chr2_3:6929487-6929506 | Msa0275020:intron | 40.0% |
| GAGTTATGAATTGTGCCAAC+TGG | - | chr2_3:6929820-6929839 | None:intergenic | 40.0% | |
| CTTACAGTAAGAACTGAAGC+TGG | - | chr2_3:6929902-6929921 | None:intergenic | 40.0% | |
| GGGATCGGATATTTATTGAG+TGG | - | chr2_3:6930353-6930372 | None:intergenic | 40.0% | |
| ! | ATTGGTTCAGACCATTCACT+TGG | + | chr2_3:6930446-6930465 | Msa0275020:intron | 40.0% |
| AACATCACGTTGCTGAGATA+TGG | + | chr2_3:6930512-6930531 | Msa0275020:intron | 40.0% | |
| ATACCCTATGACGAGGATTA+GGG | - | chr2_3:6930598-6930617 | None:intergenic | 40.0% | |
| AATACCCTATGACGAGGATT+AGG | - | chr2_3:6930599-6930618 | None:intergenic | 40.0% | |
| ! | ATCCTCGTCATAGGGTATTA+TGG | + | chr2_3:6930600-6930619 | Msa0275020:intron | 40.0% |
| CTGTGAAAAGCCAGAAAACA+GGG | - | chr2_3:6930645-6930664 | None:intergenic | 40.0% | |
| TCTGTGAAAAGCCAGAAAAC+AGG | - | chr2_3:6930646-6930665 | None:intergenic | 40.0% | |
| ! | TGGCTTTTCACAGATTTCTC+TGG | + | chr2_3:6930652-6930671 | Msa0275020:intron | 40.0% |
| ! | GGCTTTTCACAGATTTCTCT+GGG | + | chr2_3:6930653-6930672 | Msa0275020:intron | 40.0% |
| TAAACGACAGCATGCTTTGA+TGG | - | chr2_3:6930898-6930917 | None:intergenic | 40.0% | |
| ATTACTTCTGCTGAAGCAGA+TGG | + | chr2_3:6930972-6930991 | Msa0275020:intron | 40.0% | |
| ! | ACTGTACTCTCTTTTCAGCT+TGG | + | chr2_3:6931377-6931396 | Msa0275020:intron | 40.0% |
| !!! | CTTGGTGGTGGTTATCTTTT+TGG | + | chr2_3:6931395-6931414 | Msa0275020:CDS | 40.0% |
| !! | TATCTTTTTGGGCTTCCAGT+TGG | + | chr2_3:6931407-6931426 | Msa0275020:CDS | 40.0% |
| AACAGTTGCACCTATAGAGT+CGG | - | chr2_3:6931441-6931460 | None:intergenic | 40.0% | |
| ! | CGGTAGAACAGTAAGTTTTC+AGG | + | chr2_3:6931484-6931503 | Msa0275020:intron | 40.0% |
| !! | GAAGACCGTTTGTTGTTTCT+AGG | + | chr2_3:6931684-6931703 | Msa0275020:CDS | 40.0% |
| !! | AATACGGAGATCTGGCTTTA+AGG | + | chr2_3:6931745-6931764 | Msa0275020:CDS | 40.0% |
| !! | GAGTTCTGAGTTTGGAAACA+AGG | - | chr2_3:6931857-6931876 | None:intergenic | 40.0% |
| !! | ACGGTTTAGAGTTCTGAGTT+TGG | - | chr2_3:6931865-6931884 | None:intergenic | 40.0% |
| AAAACTAAGCATAAGCCGCT+TGG | + | chr2_3:6932213-6932232 | Msa0275020:intron | 40.0% | |
| CATTTAGATCCCGTTAGTTG+TGG | - | chr2_3:6932536-6932555 | None:intergenic | 40.0% | |
| CACAACTAACGGGATCTAAA+TGG | + | chr2_3:6932534-6932553 | Msa0275020:intron | 40.0% | |
| ! | TAAAGGGCATGTAGGTATGT+TGG | + | chr2_3:6932626-6932645 | Msa0275020:intron | 40.0% |
| TAGTCATAAGGATCCTTTGG+GGG | + | chr2_3:6932875-6932894 | Msa0275020:intron | 40.0% | |
| TAATCCCCAAACCATATAGC+TGG | - | chr2_3:6932955-6932974 | None:intergenic | 40.0% | |
| ! | AGAGATTGTGTCTTTTCCCT+AGG | + | chr2_3:6932995-6933014 | Msa0275020:intron | 40.0% |
| TATCCCTATTACACTGCCAA+TGG | + | chr2_3:6933033-6933052 | Msa0275020:intron | 40.0% | |
| AAGCCATTGGCAGTGTAATA+GGG | - | chr2_3:6933039-6933058 | None:intergenic | 40.0% | |
| TAAGCCATTGGCAGTGTAAT+AGG | - | chr2_3:6933040-6933059 | None:intergenic | 40.0% | |
| TTCACTTGTGGAATACATGC+TGG | + | chr2_3:6933289-6933308 | Msa0275020:CDS | 40.0% | |
| GTATACCATCATTCCTAACC+AGG | - | chr2_3:6933318-6933337 | None:intergenic | 40.0% | |
| TTTCATGGATGTGCATGTCA+TGG | + | chr2_3:6933606-6933625 | Msa0275020:intron | 40.0% | |
| TAGTTCGGAGTTTGAACTCT+GGG | - | chr2_3:6933760-6933779 | None:intergenic | 40.0% | |
| ATAGTTCGGAGTTTGAACTC+TGG | - | chr2_3:6933761-6933780 | None:intergenic | 40.0% | |
| !! | AATAACGGATTGGCAATAGG+TGG | - | chr2_3:6933982-6934001 | None:intergenic | 40.0% |
| CTGTAAAAACATATGGACGG+TGG | - | chr2_3:6934279-6934298 | None:intergenic | 40.0% | |
| ATTATTGCAGCCAATAACGC+TGG | + | chr2_3:6934346-6934365 | Msa0275020:intron | 40.0% | |
| TATACAAGTGCCAGCGTTAT+TGG | - | chr2_3:6934359-6934378 | None:intergenic | 40.0% | |
| GATCTTTCTGACGTAACACA+TGG | + | chr2_3:6934398-6934417 | Msa0275020:CDS | 40.0% | |
| TTTCTGACGTAACACATGGT+TGG | + | chr2_3:6934402-6934421 | Msa0275020:CDS | 40.0% | |
| TTTCTTTCTCTTGCTGATGC+AGG | + | chr2_3:6934618-6934637 | Msa0275020:intron | 40.0% | |
| TAAAGTTGCCAAGTCTGCTT+TGG | + | chr2_3:6934815-6934834 | Msa0275020:CDS | 40.0% | |
| ! | AATATCTTCGTTTTCGGCCA+AGG | - | chr2_3:6934847-6934866 | None:intergenic | 40.0% |
| GCCGAAAACGAAGATATTGA+TGG | + | chr2_3:6934849-6934868 | Msa0275020:CDS | 40.0% | |
| CACAAATAAATAGGTGGAGC+TGG | - | chr2_3:6935057-6935076 | None:intergenic | 40.0% | |
| TGAAGAAGATCGGAAAGGGT+AGG | - | chr2_3:6928249-6928268 | None:intergenic | 45.0% | |
| TCAAACCTGGCAAATCTTGG+AGG | + | chr2_3:6928411-6928430 | Msa0275020:five_prime_UTR | 45.0% | |
| ! | TCGTCGGTTAAATCAAGGGA+AGG | - | chr2_3:6928465-6928484 | None:intergenic | 45.0% |
| ! | CGTCTTCGTCGGTTAAATCA+AGG | - | chr2_3:6928470-6928489 | None:intergenic | 45.0% |
| !! | GATTCACCATGGCTTTTTCC+TGG | + | chr2_3:6928514-6928533 | Msa0275020:exon | 45.0% |
| !! | CTATGGGTTGATCGTGATCT+TGG | + | chr2_3:6928775-6928794 | Msa0275020:CDS | 45.0% |
| !! | ATGGGTTGATCGTGATCTTG+GGG | + | chr2_3:6928777-6928796 | Msa0275020:CDS | 45.0% |
| TTGCGAAGACTAGATGGGAT+AGG | + | chr2_3:6928942-6928961 | Msa0275020:intron | 45.0% | |
| ! | AAGGAGCGTATATCAGATGG+AGG | + | chr2_3:6929077-6929096 | Msa0275020:intron | 45.0% |
| AGAGAGGCAAAGGAAGACAT+AGG | + | chr2_3:6929114-6929133 | Msa0275020:intron | 45.0% | |
| ! | CTTTGGGTTATGTGACCAGT+TGG | + | chr2_3:6929802-6929821 | Msa0275020:intron | 45.0% |
| CAAAGCAACATTGTAGGCAG+CGG | - | chr2_3:6930017-6930036 | None:intergenic | 45.0% | |
| ACCATTCACTTGGAACCTCT+AGG | + | chr2_3:6930456-6930475 | Msa0275020:intron | 45.0% | |
| TTAGGGACAGGTAAGAATGG+TGG | - | chr2_3:6930581-6930600 | None:intergenic | 45.0% | |
| GGATTAGGGACAGGTAAGAA+TGG | - | chr2_3:6930584-6930603 | None:intergenic | 45.0% | |
| TGTCCCTAATCCTCGTCATA+GGG | + | chr2_3:6930592-6930611 | Msa0275020:intron | 45.0% | |
| GTCCATAATACCCTATGACG+AGG | - | chr2_3:6930605-6930624 | None:intergenic | 45.0% | |
| ! | TTATCCCTGTCCCTGTTTTC+TGG | + | chr2_3:6930632-6930651 | Msa0275020:intron | 45.0% |
| AAAGCCAGAAAACAGGGACA+GGG | - | chr2_3:6930639-6930658 | None:intergenic | 45.0% | |
| AAAAGCCAGAAAACAGGGAC+AGG | - | chr2_3:6930640-6930659 | None:intergenic | 45.0% | |
| ! | GTACTCTCTTTTCAGCTTGG+TGG | + | chr2_3:6931380-6931399 | Msa0275020:intron | 45.0% |
| GACTCTATAGGTGCAACTGT+TGG | + | chr2_3:6931440-6931459 | Msa0275020:CDS | 45.0% | |
| GCTATTCAGCAGCAAGTAGT+GGG | - | chr2_3:6931552-6931571 | None:intergenic | 45.0% | |
| AGCTATTCAGCAGCAAGTAG+TGG | - | chr2_3:6931553-6931572 | None:intergenic | 45.0% | |
| GCAATTGCAATACGGAGATC+TGG | + | chr2_3:6931737-6931756 | Msa0275020:CDS | 45.0% | |
| ! | TTTGTCACAAGCGGGTTCTT+AGG | - | chr2_3:6932247-6932266 | None:intergenic | 45.0% |
| GGGACACCACAGATAATTTC+TGG | - | chr2_3:6932677-6932696 | None:intergenic | 45.0% | |
| TATCTGTGGTGTCCCTTCTT+TGG | + | chr2_3:6932682-6932701 | Msa0275020:intron | 45.0% | |
| TCTACAGCACACCAGAATGA+GGG | - | chr2_3:6932749-6932768 | None:intergenic | 45.0% | |
| ACGCTGGCACTTGTATATGT+TGG | + | chr2_3:6934362-6934381 | Msa0275020:CDS | 45.0% | |
| ! | GGCTTTATCCAAAGCAGACT+TGG | - | chr2_3:6934826-6934845 | None:intergenic | 45.0% |
| ! | GTCTGCTTTGGATAAAGCCT+TGG | + | chr2_3:6934827-6934846 | Msa0275020:CDS | 45.0% |
| ! | AACAATTGGTAACTCCGGTG+AGG | - | chr2_3:6934883-6934902 | None:intergenic | 45.0% |
| ! | TCGGCAACAATTGGTAACTC+CGG | - | chr2_3:6934888-6934907 | None:intergenic | 45.0% |
| !! | GTTCAGATCTGATGGTGGTT+CGG | - | chr2_3:6934907-6934926 | None:intergenic | 45.0% |
| ! | AGTGGTTGGTTCAGATCTGA+TGG | - | chr2_3:6934915-6934934 | None:intergenic | 45.0% |
| !!! | GATTTTTTTATTAAAAAAAA+AGG | - | chr2_3:6932475-6932494 | None:intergenic | 5.0% |
| !!! | AAATTATACTATATTTTATT+TGG | + | chr2_3:6932779-6932798 | Msa0275020:intron | 5.0% |
| ACGACACTCTTCGTCTTCGT+CGG | - | chr2_3:6928481-6928500 | None:intergenic | 50.0% | |
| !! | AAGACGAAGAGTGTCGTCCT+TGG | + | chr2_3:6928484-6928503 | Msa0275020:five_prime_UTR | 50.0% |
| ATGGTGAATCTTCGACGCCA+AGG | - | chr2_3:6928504-6928523 | None:intergenic | 50.0% | |
| ! | TTGGCGTCGAAGATTCACCA+TGG | + | chr2_3:6928503-6928522 | Msa0275020:exon | 50.0% |
| AGAAGCCCAGGAAAAAGCCA+TGG | - | chr2_3:6928523-6928542 | None:intergenic | 50.0% | |
| TTGATCGTGATCTTGGGGCA+TGG | + | chr2_3:6928782-6928801 | Msa0275020:CDS | 50.0% | |
| TGATCGTGATCTTGGGGCAT+GGG | + | chr2_3:6928783-6928802 | Msa0275020:CDS | 50.0% | |
| AGGTGGTCCAAACTAGGCTT+AGG | + | chr2_3:6929013-6929032 | Msa0275020:intron | 50.0% | |
| ACTAAGTGGGGTCGGATACA+CGG | - | chr2_3:6929219-6929238 | None:intergenic | 50.0% | |
| TGTATCCGACCCCACTTAGT+GGG | + | chr2_3:6929219-6929238 | Msa0275020:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr2_3:6929227-6929246 | None:intergenic | 50.0% | |
| ! | AGGCCTTATCCCACTAAGTG+GGG | - | chr2_3:6929231-6929250 | None:intergenic | 50.0% |
| ! | CAGGCCTTATCCCACTAAGT+GGG | - | chr2_3:6929232-6929251 | None:intergenic | 50.0% |
| ! | TCAGGCCTTATCCCACTAAG+TGG | - | chr2_3:6929233-6929252 | None:intergenic | 50.0% |
| TTGACGTGGTTAAGCTGGCT+AGG | + | chr2_3:6929492-6929511 | Msa0275020:intron | 50.0% | |
| TGGTTAAGCTGGCTAGGTGA+AGG | + | chr2_3:6929498-6929517 | Msa0275020:intron | 50.0% | |
| GGAACTGCCAAGACAGTCAA+AGG | - | chr2_3:6929881-6929900 | None:intergenic | 50.0% | |
| ! | CGCTGCCTACAATGTTGCTT+TGG | + | chr2_3:6930015-6930034 | Msa0275020:intron | 50.0% |
| GCCTAGAGGTTCCAAGTGAA+TGG | - | chr2_3:6930460-6930479 | None:intergenic | 50.0% | |
| TGAGATATGGCACCCTTCCA+AGG | + | chr2_3:6930525-6930544 | Msa0275020:intron | 50.0% | |
| TAAGAATGGTGGCAGAGAGC+AGG | - | chr2_3:6930570-6930589 | None:intergenic | 50.0% | |
| CTATGACGAGGATTAGGGAC+AGG | - | chr2_3:6930593-6930612 | None:intergenic | 50.0% | |
| CTGTCCCTAATCCTCGTCAT+AGG | + | chr2_3:6930591-6930610 | Msa0275020:intron | 50.0% | |
| !! | CTCTCTTTTCAGCTTGGTGG+TGG | + | chr2_3:6931383-6931402 | Msa0275020:intron | 50.0% |
| !! | GGCTTTGTTGCCGACTCTAT+AGG | + | chr2_3:6931428-6931447 | Msa0275020:CDS | 50.0% |
| ATAGGTGCAACTGTTGGTGC+AGG | + | chr2_3:6931446-6931465 | Msa0275020:CDS | 50.0% | |
| GCAGGAGCTGCATTTCTTCT+CGG | + | chr2_3:6931464-6931483 | Msa0275020:CDS | 50.0% | |
| ACTAAGCATAAGCCGCTTGG+TGG | + | chr2_3:6932216-6932235 | Msa0275020:intron | 50.0% | |
| TCTTAGGTGACACCACCAAG+CGG | - | chr2_3:6932231-6932250 | None:intergenic | 50.0% | |
| !! | ATGGTGCTGCCACCAAAGAA+GGG | - | chr2_3:6932697-6932716 | None:intergenic | 50.0% |
| GTCTACAGCACACCAGAATG+AGG | - | chr2_3:6932750-6932769 | None:intergenic | 50.0% | |
| GGTGACTCCTGTTTCACTTG+TGG | + | chr2_3:6933277-6933296 | Msa0275020:CDS | 50.0% | |
| !! | TGGAATACATGCTGGCTTCC+TGG | + | chr2_3:6933297-6933316 | Msa0275020:CDS | 50.0% |
| !! | TACATGCTGGCTTCCTGGTT+AGG | + | chr2_3:6933302-6933321 | Msa0275020:CDS | 50.0% |
| GGCTTCCTGGTTAGGAATGA+TGG | + | chr2_3:6933310-6933329 | Msa0275020:CDS | 50.0% | |
| ACGAATTCTCGAAGTCGCGT+TGG | + | chr2_3:6934426-6934445 | Msa0275020:CDS | 50.0% | |
| CGAATTCTCGAAGTCGCGTT+GGG | + | chr2_3:6934427-6934446 | Msa0275020:CDS | 50.0% | |
| TGATGGGGTTACATCCTCAC+CGG | + | chr2_3:6934866-6934885 | Msa0275020:CDS | 50.0% | |
| ! | GATGGTGGTTCGGCAACAAT+TGG | - | chr2_3:6934897-6934916 | None:intergenic | 50.0% |
| ! | GGTTGGTTCAGATCTGATGG+TGG | - | chr2_3:6934912-6934931 | None:intergenic | 50.0% |
| TTTCCTGGGCTTCTGCCTTC+AGG | + | chr2_3:6928529-6928548 | Msa0275020:CDS | 55.0% | |
| GATCGTGATCTTGGGGCATG+GGG | + | chr2_3:6928784-6928803 | Msa0275020:CDS | 55.0% | |
| ATCGTGATCTTGGGGCATGG+GGG | + | chr2_3:6928785-6928804 | Msa0275020:CDS | 55.0% | |
| GTGTATCCGACCCCACTTAG+TGG | + | chr2_3:6929218-6929237 | Msa0275020:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr2_3:6929225-6929244 | Msa0275020:intron | 55.0% | |
| GGCGGCGTAACTTACTAGCT+TGG | + | chr2_3:6929360-6929379 | Msa0275020:intron | 55.0% | |
| CATTACGAGAGGCAGCCTAG+AGG | - | chr2_3:6930474-6930493 | None:intergenic | 55.0% | |
| TATGGCACCCTTCCAAGGTG+AGG | + | chr2_3:6930530-6930549 | Msa0275020:intron | 55.0% | |
| ATGGCACCCTTCCAAGGTGA+GGG | + | chr2_3:6930531-6930550 | Msa0275020:intron | 55.0% | |
| ACCCTTCCAAGGTGAGGGTT+CGG | + | chr2_3:6930536-6930555 | Msa0275020:intron | 55.0% | |
| TCCGAACCCTCACCTTGGAA+GGG | - | chr2_3:6930540-6930559 | None:intergenic | 55.0% | |
| AGTACTCCGAACCCTCACCT+TGG | - | chr2_3:6930545-6930564 | None:intergenic | 55.0% | |
| GAGTCGGCAACAAAGCCAAC+TGG | - | chr2_3:6931425-6931444 | None:intergenic | 55.0% | |
| CTGTGGTGTCCCTTCTTTGG+TGG | + | chr2_3:6932685-6932704 | Msa0275020:intron | 55.0% | |
| !! | CATGGTGCTGCCACCAAAGA+AGG | - | chr2_3:6932698-6932717 | None:intergenic | 55.0% |
| GATCGTGCATGCCCTCATTC+TGG | + | chr2_3:6932735-6932754 | Msa0275020:intron | 55.0% | |
| GATCCTGAAGGCAGAAGCCC+AGG | - | chr2_3:6928535-6928554 | None:intergenic | 60.0% | |
| CTCCGAACCCTCACCTTGGA+AGG | - | chr2_3:6930541-6930560 | None:intergenic | 60.0% | |
| CTGCTGAAGCAGATGGTCGC+TGG | + | chr2_3:6930979-6930998 | Msa0275020:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 6928190 | 6935224 | 6928190 | ID=Msa0275020;Name=Msa0275020 |
| chr2_3 | mRNA | 6928190 | 6935224 | 6928190 | ID=Msa0275020-mRNA-1;Parent=Msa0275020;Name=Msa0275020-mRNA-1;_AED=0.15;_eAED=0.15;_QI=332|1|1|1|1|1|9|247|274 |
| chr2_3 | exon | 6928190 | 6928617 | 6928190 | ID=Msa0275020-mRNA-1:exon:3272;Parent=Msa0275020-mRNA-1 |
| chr2_3 | exon | 6928757 | 6928818 | 6928757 | ID=Msa0275020-mRNA-1:exon:3273;Parent=Msa0275020-mRNA-1 |
| chr2_3 | exon | 6929862 | 6929916 | 6929862 | ID=Msa0275020-mRNA-1:exon:3274;Parent=Msa0275020-mRNA-1 |
| chr2_3 | exon | 6931395 | 6931493 | 6931395 | ID=Msa0275020-mRNA-1:exon:3275;Parent=Msa0275020-mRNA-1 |
| chr2_3 | exon | 6931680 | 6931766 | 6931680 | ID=Msa0275020-mRNA-1:exon:3276;Parent=Msa0275020-mRNA-1 |
| chr2_3 | exon | 6933215 | 6933331 | 6933215 | ID=Msa0275020-mRNA-1:exon:3277;Parent=Msa0275020-mRNA-1 |
| chr2_3 | exon | 6934356 | 6934448 | 6934356 | ID=Msa0275020-mRNA-1:exon:3278;Parent=Msa0275020-mRNA-1 |
| chr2_3 | exon | 6934640 | 6934670 | 6934640 | ID=Msa0275020-mRNA-1:exon:3279;Parent=Msa0275020-mRNA-1 |
| chr2_3 | exon | 6934793 | 6935224 | 6934793 | ID=Msa0275020-mRNA-1:exon:3280;Parent=Msa0275020-mRNA-1 |
| chr2_3 | five_prime_UTR | 6928190 | 6928521 | 6928190 | ID=Msa0275020-mRNA-1:five_prime_utr;Parent=Msa0275020-mRNA-1 |
| chr2_3 | CDS | 6928522 | 6928617 | 6928522 | ID=Msa0275020-mRNA-1:cds;Parent=Msa0275020-mRNA-1 |
| chr2_3 | CDS | 6928757 | 6928818 | 6928757 | ID=Msa0275020-mRNA-1:cds;Parent=Msa0275020-mRNA-1 |
| chr2_3 | CDS | 6929862 | 6929916 | 6929862 | ID=Msa0275020-mRNA-1:cds;Parent=Msa0275020-mRNA-1 |
| chr2_3 | CDS | 6931395 | 6931493 | 6931395 | ID=Msa0275020-mRNA-1:cds;Parent=Msa0275020-mRNA-1 |
| chr2_3 | CDS | 6931680 | 6931766 | 6931680 | ID=Msa0275020-mRNA-1:cds;Parent=Msa0275020-mRNA-1 |
| chr2_3 | CDS | 6933215 | 6933331 | 6933215 | ID=Msa0275020-mRNA-1:cds;Parent=Msa0275020-mRNA-1 |
| chr2_3 | CDS | 6934356 | 6934448 | 6934356 | ID=Msa0275020-mRNA-1:cds;Parent=Msa0275020-mRNA-1 |
| chr2_3 | CDS | 6934640 | 6934670 | 6934640 | ID=Msa0275020-mRNA-1:cds;Parent=Msa0275020-mRNA-1 |
| chr2_3 | CDS | 6934793 | 6934977 | 6934793 | ID=Msa0275020-mRNA-1:cds;Parent=Msa0275020-mRNA-1 |
| chr2_3 | three_prime_UTR | 6934978 | 6935224 | 6934978 | ID=Msa0275020-mRNA-1:three_prime_utr;Parent=Msa0275020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
