Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187950 | XP_013444686.1 | 99.541 | 218 | 1 | 0 | 1 | 218 | 1 | 218 | 5.88e-150 | 425 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187950 | sp|Q9FMP0|MD19A_ARATH | 63.229 | 223 | 75 | 3 | 1 | 218 | 1 | 221 | 3.67e-60 | 191 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187950 | A0A072TNC0 | 99.541 | 218 | 1 | 0 | 1 | 218 | 1 | 218 | 2.81e-150 | 425 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003890 | Msa0187950 | 0.805428 | 1.341078e-49 | -8.615850e-47 |
Msa0005270 | Msa0187950 | 0.814515 | 1.481577e-51 | -8.615850e-47 |
Msa0006110 | Msa0187950 | 0.845336 | 4.327298e-59 | -8.615850e-47 |
Msa0007440 | Msa0187950 | 0.833230 | 6.008238e-56 | -8.615850e-47 |
Msa0014710 | Msa0187950 | 0.803983 | 2.686083e-49 | -8.615850e-47 |
Msa0015090 | Msa0187950 | 0.814374 | 1.591903e-51 | -8.615850e-47 |
Msa0020410 | Msa0187950 | 0.803265 | 3.785333e-49 | -8.615850e-47 |
Msa0021210 | Msa0187950 | 0.816073 | 6.674302e-52 | -8.615850e-47 |
Msa0028660 | Msa0187950 | 0.810195 | 1.300824e-50 | -8.615850e-47 |
Msa0029240 | Msa0187950 | 0.805536 | 1.273129e-49 | -8.615850e-47 |
Msa0031180 | Msa0187950 | 0.837028 | 6.619776e-57 | -8.615850e-47 |
Msa0032470 | Msa0187950 | 0.800306 | 1.533553e-48 | -8.615850e-47 |
Msa0036140 | Msa0187950 | 0.833904 | 4.078883e-56 | -8.615850e-47 |
Msa0037880 | Msa0187950 | 0.816923 | 4.306086e-52 | -8.615850e-47 |
Msa0040620 | Msa0187950 | 0.831146 | 1.969231e-55 | -8.615850e-47 |
Msa0042550 | Msa0187950 | 0.824999 | 5.952173e-54 | -8.615850e-47 |
Msa0043980 | Msa0187950 | 0.828543 | 8.482300e-55 | -8.615850e-47 |
Msa0045550 | Msa0187950 | 0.807765 | 4.307193e-50 | -8.615850e-47 |
Msa0049750 | Msa0187950 | 0.812908 | 3.346202e-51 | -8.615850e-47 |
Msa0053010 | Msa0187950 | 0.807767 | 4.304539e-50 | -8.615850e-47 |
Msa0054820 | Msa0187950 | 0.809958 | 1.462776e-50 | -8.615850e-47 |
Msa0056450 | Msa0187950 | 0.818711 | 1.699476e-52 | -8.615850e-47 |
Msa0058600 | Msa0187950 | 0.816294 | 5.954770e-52 | -8.615850e-47 |
Msa0062490 | Msa0187950 | 0.804070 | 2.576902e-49 | -8.615850e-47 |
Msa0063530 | Msa0187950 | 0.811467 | 6.900620e-51 | -8.615850e-47 |
Msa0068740 | Msa0187950 | -0.844618 | 6.760982e-59 | -8.615850e-47 |
Msa0068780 | Msa0187950 | -0.817900 | 2.593957e-52 | -8.615850e-47 |
Msa0075880 | Msa0187950 | 0.814712 | 1.339677e-51 | -8.615850e-47 |
Msa0078480 | Msa0187950 | 0.808340 | 3.250390e-50 | -8.615850e-47 |
Msa0083280 | Msa0187950 | 0.803364 | 3.612100e-49 | -8.615850e-47 |
Msa0084080 | Msa0187950 | 0.813502 | 2.477806e-51 | -8.615850e-47 |
Msa0084380 | Msa0187950 | 0.809550 | 1.790585e-50 | -8.615850e-47 |
Msa0086420 | Msa0187950 | 0.838832 | 2.274496e-57 | -8.615850e-47 |
Msa0091210 | Msa0187950 | -0.800862 | 1.180870e-48 | -8.615850e-47 |
Msa0095560 | Msa0187950 | 0.806129 | 9.554855e-50 | -8.615850e-47 |
Msa0099650 | Msa0187950 | 0.831116 | 2.003485e-55 | -8.615850e-47 |
Msa0100160 | Msa0187950 | 0.800924 | 1.147091e-48 | -8.615850e-47 |
Msa0104230 | Msa0187950 | 0.807103 | 5.952648e-50 | -8.615850e-47 |
Msa0104800 | Msa0187950 | 0.830658 | 2.595006e-55 | -8.615850e-47 |
Msa0112770 | Msa0187950 | 0.814836 | 1.257912e-51 | -8.615850e-47 |
Msa0114430 | Msa0187950 | 0.820998 | 5.098718e-53 | -8.615850e-47 |
Msa0115400 | Msa0187950 | 0.802149 | 6.432645e-49 | -8.615850e-47 |
Msa0126190 | Msa0187950 | 0.826478 | 2.653411e-54 | -8.615850e-47 |
Msa0138020 | Msa0187950 | 0.842029 | 3.318530e-58 | -8.615850e-47 |
Msa0138500 | Msa0187950 | 0.826053 | 3.350184e-54 | -8.615850e-47 |
Msa0138520 | Msa0187950 | 0.822662 | 2.100655e-53 | -8.615850e-47 |
Msa0148080 | Msa0187950 | 0.809998 | 1.433839e-50 | -8.615850e-47 |
Msa0151180 | Msa0187950 | 0.820524 | 6.555789e-53 | -8.615850e-47 |
Msa0170110 | Msa0187950 | -0.810833 | 9.467667e-51 | -8.615850e-47 |
Msa0171120 | Msa0187950 | 0.842428 | 2.601537e-58 | -8.615850e-47 |
Msa0174390 | Msa0187950 | 0.836554 | 8.742616e-57 | -8.615850e-47 |
Msa0178510 | Msa0187950 | 0.820517 | 6.579948e-53 | -8.615850e-47 |
Msa0178570 | Msa0187950 | 0.816389 | 5.671212e-52 | -8.615850e-47 |
Msa0178860 | Msa0187950 | -0.811794 | 5.857144e-51 | -8.615850e-47 |
Msa0179190 | Msa0187950 | 0.803968 | 2.705893e-49 | -8.615850e-47 |
Msa0183760 | Msa0187950 | 0.800263 | 1.564640e-48 | -8.615850e-47 |
Msa0187950 | Msa0188830 | 0.804649 | 1.951610e-49 | -8.615850e-47 |
Msa0187950 | Msa0194440 | 0.806020 | 1.007584e-49 | -8.615850e-47 |
Msa0187950 | Msa0200580 | 0.800253 | 1.572045e-48 | -8.615850e-47 |
Msa0187950 | Msa0204940 | 0.814162 | 1.772796e-51 | -8.615850e-47 |
Msa0187950 | Msa0206010 | 0.840166 | 1.024050e-57 | -8.615850e-47 |
Msa0187950 | Msa0217680 | 0.802531 | 5.367857e-49 | -8.615850e-47 |
Msa0187950 | Msa0218370 | 0.818870 | 1.564142e-52 | -8.615850e-47 |
Msa0187950 | Msa0219240 | 0.816055 | 6.735095e-52 | -8.615850e-47 |
Msa0187950 | Msa0223010 | 0.801680 | 8.033361e-49 | -8.615850e-47 |
Msa0187950 | Msa0223910 | 0.804421 | 2.177389e-49 | -8.615850e-47 |
Msa0187950 | Msa0226180 | 0.828611 | 8.167380e-55 | -8.615850e-47 |
Msa0187950 | Msa0236420 | 0.843593 | 1.273687e-58 | -8.615850e-47 |
Msa0187950 | Msa0240300 | 0.841644 | 4.192897e-58 | -8.615850e-47 |
Msa0187950 | Msa0241140 | 0.819958 | 8.834849e-53 | -8.615850e-47 |
Msa0187950 | Msa0248770 | 0.801322 | 9.509220e-49 | -8.615850e-47 |
Msa0187950 | Msa0249100 | 0.811735 | 6.034107e-51 | -8.615850e-47 |
Msa0187950 | Msa0252750 | 0.805591 | 1.239508e-49 | -8.615850e-47 |
Msa0187950 | Msa0261720 | 0.809239 | 2.087657e-50 | -8.615850e-47 |
Msa0187950 | Msa0265150 | 0.819642 | 1.043375e-52 | -8.615850e-47 |
Msa0187950 | Msa0270960 | 0.843890 | 1.060527e-58 | -8.615850e-47 |
Msa0187950 | Msa0271790 | 0.815065 | 1.118797e-51 | -8.615850e-47 |
Msa0187950 | Msa0281480 | 0.829862 | 4.059042e-55 | -8.615850e-47 |
Msa0187950 | Msa0281640 | 0.802289 | 6.020321e-49 | -8.615850e-47 |
Msa0187950 | Msa0286670 | 0.818331 | 2.072764e-52 | -8.615850e-47 |
Msa0187950 | Msa0287410 | 0.816963 | 4.216316e-52 | -8.615850e-47 |
Msa0187950 | Msa0288120 | 0.813646 | 2.304240e-51 | -8.615850e-47 |
Msa0187950 | Msa0289330 | 0.804451 | 2.146350e-49 | -8.615850e-47 |
Msa0187950 | Msa0290760 | 0.823958 | 1.046355e-53 | -8.615850e-47 |
Msa0187950 | Msa0303150 | 0.833098 | 6.480462e-56 | -8.615850e-47 |
Msa0187950 | Msa0305190 | 0.820385 | 7.053131e-53 | -8.615850e-47 |
Msa0187950 | Msa0306210 | -0.805013 | 1.638142e-49 | -8.615850e-47 |
Msa0187950 | Msa0307310 | 0.832655 | 8.352860e-56 | -8.615850e-47 |
Msa0187950 | Msa0310600 | 0.807421 | 5.095558e-50 | -8.615850e-47 |
Msa0187950 | Msa0310660 | 0.808154 | 3.559533e-50 | -8.615850e-47 |
Msa0187950 | Msa0319170 | 0.824771 | 6.737666e-54 | -8.615850e-47 |
Msa0187950 | Msa0320610 | 0.806858 | 6.704987e-50 | -8.615850e-47 |
Msa0187950 | Msa0320800 | 0.802210 | 6.251026e-49 | -8.615850e-47 |
Msa0187950 | Msa0326110 | 0.848311 | 6.645408e-60 | -8.615850e-47 |
Msa0187950 | Msa0326520 | 0.801041 | 1.085788e-48 | -8.615850e-47 |
Msa0187950 | Msa0335060 | 0.810825 | 9.509349e-51 | -8.615850e-47 |
Msa0187950 | Msa0337590 | 0.814524 | 1.474929e-51 | -8.615850e-47 |
Msa0187950 | Msa0339620 | 0.800698 | 1.275323e-48 | -8.615850e-47 |
Msa0187950 | Msa0347950 | 0.818512 | 1.885630e-52 | -8.615850e-47 |
Msa0187950 | Msa0357830 | 0.800743 | 1.248917e-48 | -8.615850e-47 |
Msa0187950 | Msa0363790 | 0.815272 | 1.006636e-51 | -8.615850e-47 |
Msa0187950 | Msa0371950 | 0.804147 | 2.483788e-49 | -8.615850e-47 |
Msa0187950 | Msa0373450 | 0.806171 | 9.364280e-50 | -8.615850e-47 |
Msa0187950 | Msa0376910 | 0.823597 | 1.271449e-53 | -8.615850e-47 |
Msa0187950 | Msa0377440 | 0.809098 | 2.238196e-50 | -8.615850e-47 |
Msa0187950 | Msa0381610 | -0.807938 | 3.958279e-50 | -8.615850e-47 |
Msa0187950 | Msa0389910 | 0.819613 | 1.059383e-52 | -8.615850e-47 |
Msa0187950 | Msa0390960 | 0.802824 | 4.669292e-49 | -8.615850e-47 |
Msa0187950 | Msa0392270 | 0.860042 | 2.721764e-63 | -8.615850e-47 |
Msa0187950 | Msa0393620 | 0.805837 | 1.100722e-49 | -8.615850e-47 |
Msa0187950 | Msa0394260 | 0.808415 | 3.131933e-50 | -8.615850e-47 |
Msa0187950 | Msa0398200 | 0.862948 | 3.528117e-64 | -8.615850e-47 |
Msa0187950 | Msa0401560 | 0.815936 | 7.161590e-52 | -8.615850e-47 |
Msa0187950 | Msa0408390 | 0.806755 | 7.050553e-50 | -8.615850e-47 |
Msa0187950 | Msa0412840 | 0.832684 | 8.215743e-56 | -8.615850e-47 |
Msa0187950 | Msa0417650 | 0.809110 | 2.224747e-50 | -8.615850e-47 |
Msa0187950 | Msa0422180 | 0.804598 | 2.000635e-49 | -8.615850e-47 |
Msa0187950 | Msa0426900 | 0.824267 | 8.855169e-54 | -8.615850e-47 |
Msa0187950 | Msa0433410 | -0.869948 | 2.110562e-66 | -8.615850e-47 |
Msa0187950 | Msa0434180 | 0.815247 | 1.019233e-51 | -8.615850e-47 |
Msa0187950 | Msa0436760 | 0.829687 | 4.476707e-55 | -8.615850e-47 |
Msa0187950 | Msa0442610 | 0.807610 | 4.646239e-50 | -8.615850e-47 |
Msa0187950 | Msa0444750 | -0.812185 | 4.815136e-51 | -8.615850e-47 |
Msa0187950 | Msa0446270 | 0.803280 | 3.758504e-49 | -8.615850e-47 |
Msa0187950 | Msa0453200 | 0.808656 | 2.782679e-50 | -8.615850e-47 |
Msa0187950 | Msa0453640 | 0.817809 | 2.719651e-52 | -8.615850e-47 |
Msa0187950 | Msa0455760 | 0.813393 | 2.619110e-51 | -8.615850e-47 |
Msa0187950 | Msa0457510 | 0.852127 | 5.659229e-61 | -8.615850e-47 |
Msa0187950 | Msa0468320 | 0.804544 | 2.053359e-49 | -8.615850e-47 |
Msa0187950 | Msa0471900 | 0.840787 | 7.043285e-58 | -8.615850e-47 |
Msa0187950 | Msa0472960 | -0.804523 | 2.073326e-49 | -8.615850e-47 |
Msa0187950 | Msa0477130 | -0.837880 | 4.002790e-57 | -8.615850e-47 |
Msa0187950 | Msa0481030 | 0.805977 | 1.028699e-49 | -8.615850e-47 |
Msa0187950 | Msa0481280 | 0.809416 | 1.912418e-50 | -8.615850e-47 |
Msa0187950 | Msa0481530 | 0.803100 | 4.094927e-49 | -8.615850e-47 |
Msa0187950 | Msa0482180 | 0.801132 | 1.040212e-48 | -8.615850e-47 |
Msa0187950 | Msa0485490 | 0.858476 | 8.025518e-63 | -8.615850e-47 |
Msa0187950 | Msa0487720 | 0.822242 | 2.631171e-53 | -8.615850e-47 |
Msa0187950 | Msa0501450 | 0.847404 | 1.181399e-59 | -8.615850e-47 |
Msa0187950 | Msa0512870 | 0.807146 | 5.828847e-50 | -8.615850e-47 |
Msa0187950 | Msa0518380 | 0.826889 | 2.117453e-54 | -8.615850e-47 |
Msa0187950 | Msa0521740 | 0.813080 | 3.067089e-51 | -8.615850e-47 |
Msa0187950 | Msa0523910 | 0.808414 | 3.133912e-50 | -8.615850e-47 |
Msa0187950 | Msa0525610 | 0.803823 | 2.899999e-49 | -8.615850e-47 |
Msa0187950 | Msa0526020 | 0.800704 | 1.272311e-48 | -8.615850e-47 |
Msa0187950 | Msa0529890 | 0.809799 | 1.582435e-50 | -8.615850e-47 |
Msa0187950 | Msa0530650 | 0.802801 | 4.721783e-49 | -8.615850e-47 |
Msa0187950 | Msa0549780 | 0.802460 | 5.550829e-49 | -8.615850e-47 |
Msa0187950 | Msa0561230 | 0.811132 | 8.157969e-51 | -8.615850e-47 |
Msa0187950 | Msa0566350 | 0.815089 | 1.105195e-51 | -8.615850e-47 |
Msa0187950 | Msa0566750 | 0.819429 | 1.166812e-52 | -8.615850e-47 |
Msa0187950 | Msa0570970 | 0.800235 | 1.585086e-48 | -8.615850e-47 |
Msa0187950 | Msa0571780 | 0.815205 | 1.041560e-51 | -8.615850e-47 |
Msa0187950 | Msa0575470 | 0.800522 | 1.385401e-48 | -8.615850e-47 |
Msa0187950 | Msa0579100 | 0.802193 | 6.299708e-49 | -8.615850e-47 |
Msa0187950 | Msa0579130 | 0.831631 | 1.496575e-55 | -8.615850e-47 |
Msa0187950 | Msa0579200 | 0.822723 | 2.033987e-53 | -8.615850e-47 |
Msa0187950 | Msa0580180 | 0.800351 | 1.501303e-48 | -8.615850e-47 |
Msa0187950 | Msa0585560 | 0.812749 | 3.624985e-51 | -8.615850e-47 |
Msa0187950 | Msa0587190 | 0.804110 | 2.527989e-49 | -8.615850e-47 |
Msa0187950 | Msa0592440 | 0.804026 | 2.632193e-49 | -8.615850e-47 |
Msa0187950 | Msa0594790 | 0.803263 | 3.789881e-49 | -8.615850e-47 |
Msa0187950 | Msa0595230 | 0.805824 | 1.107450e-49 | -8.615850e-47 |
Msa0187950 | Msa0598160 | 0.831166 | 1.947197e-55 | -8.615850e-47 |
Msa0187950 | Msa0607910 | 0.805958 | 1.038153e-49 | -8.615850e-47 |
Msa0187950 | Msa0610130 | 0.805182 | 1.510185e-49 | -8.615850e-47 |
Msa0187950 | Msa0610180 | 0.804192 | 2.430726e-49 | -8.615850e-47 |
Msa0187950 | Msa0610670 | 0.832490 | 9.178067e-56 | -8.615850e-47 |
Msa0187950 | Msa0617640 | 0.811036 | 8.557774e-51 | -8.615850e-47 |
Msa0187950 | Msa0620910 | 0.811102 | 8.282081e-51 | -8.615850e-47 |
Msa0187950 | Msa0620960 | 0.811874 | 5.627480e-51 | -8.615850e-47 |
Msa0187950 | Msa0624060 | 0.813765 | 2.168402e-51 | -8.615850e-47 |
Msa0187950 | Msa0625720 | 0.805653 | 1.203088e-49 | -8.615850e-47 |
Msa0187950 | Msa0626990 | 0.801095 | 1.058247e-48 | -8.615850e-47 |
Msa0187950 | Msa0636020 | 0.808696 | 2.728048e-50 | -8.615850e-47 |
Msa0187950 | Msa0637900 | 0.834165 | 3.509596e-56 | -8.615850e-47 |
Msa0187950 | Msa0651270 | 0.820494 | 6.657598e-53 | -8.615850e-47 |
Msa0187950 | Msa0661320 | 0.832111 | 1.139189e-55 | -8.615850e-47 |
Msa0187950 | Msa0667770 | 0.802497 | 5.455202e-49 | -8.615850e-47 |
Msa0187950 | Msa0673460 | 0.801550 | 8.541301e-49 | -8.615850e-47 |
Msa0187950 | Msa0676130 | 0.801366 | 9.314932e-49 | -8.615850e-47 |
Msa0187950 | Msa0676180 | 0.803763 | 2.985108e-49 | -8.615850e-47 |
Msa0187950 | Msa0679030 | 0.829767 | 4.281362e-55 | -8.615850e-47 |
Msa0187950 | Msa0679550 | 0.807116 | 5.913869e-50 | -8.615850e-47 |
Msa0187950 | Msa0688070 | 0.831393 | 1.712641e-55 | -8.615850e-47 |
Msa0187950 | Msa0704920 | 0.829359 | 5.381013e-55 | -8.615850e-47 |
Msa0187950 | Msa0705190 | 0.823993 | 1.027045e-53 | -8.615850e-47 |
Msa0187950 | Msa0705990 | 0.819436 | 1.162512e-52 | -8.615850e-47 |
Msa0187950 | Msa0709160 | 0.815788 | 7.726008e-52 | -8.615850e-47 |
Msa0187950 | Msa0711790 | 0.812159 | 4.878389e-51 | -8.615850e-47 |
Msa0187950 | Msa0715470 | 0.807435 | 5.062209e-50 | -8.615850e-47 |
Msa0187950 | Msa0716960 | 0.814145 | 1.788716e-51 | -8.615850e-47 |
Msa0187950 | Msa0717010 | 0.812113 | 4.992503e-51 | -8.615850e-47 |
Msa0187950 | Msa0719480 | 0.817011 | 4.114278e-52 | -8.615850e-47 |
Msa0187950 | Msa0721280 | 0.815100 | 1.098771e-51 | -8.615850e-47 |
Msa0187950 | Msa0721340 | 0.800809 | 1.210605e-48 | -8.615850e-47 |
Msa0187950 | Msa0721970 | 0.800384 | 1.478418e-48 | -8.615850e-47 |
Msa0187950 | Msa0724210 | 0.803066 | 4.162974e-49 | -8.615850e-47 |
Msa0187950 | Msa0727720 | 0.831715 | 1.426407e-55 | -8.615850e-47 |
Msa0187950 | Msa0731180 | 0.810003 | 1.430818e-50 | -8.615850e-47 |
Msa0187950 | Msa0732600 | 0.806864 | 6.685928e-50 | -8.615850e-47 |
Msa0187950 | Msa0740510 | 0.808602 | 2.856872e-50 | -8.615850e-47 |
Msa0187950 | Msa0741070 | 0.824861 | 6.415977e-54 | -8.615850e-47 |
Msa0187950 | Msa0748730 | 0.813137 | 2.980529e-51 | -8.615850e-47 |
Msa0187950 | Msa0749440 | 0.819901 | 9.102510e-53 | -8.615850e-47 |
Msa0187950 | Msa0750850 | 0.802497 | 5.455202e-49 | -8.615850e-47 |
Msa0187950 | Msa0751850 | 0.827618 | 1.416239e-54 | -8.615850e-47 |
Msa0187950 | Msa0754920 | 0.808738 | 2.672820e-50 | -8.615850e-47 |
Msa0187950 | Msa0760350 | 0.828318 | 9.611473e-55 | -8.615850e-47 |
Msa0187950 | Msa0763890 | 0.853291 | 2.633437e-61 | -8.615850e-47 |
Msa0187950 | Msa0763920 | 0.864663 | 1.034422e-64 | -8.615850e-47 |
Msa0187950 | Msa0773590 | 0.821700 | 3.512106e-53 | -8.615850e-47 |
Msa0187950 | Msa0788540 | 0.806996 | 6.269403e-50 | -8.615850e-47 |
Msa0187950 | Msa0790510 | 0.809245 | 2.081238e-50 | -8.615850e-47 |
Msa0187950 | Msa0796980 | 0.806778 | 6.973221e-50 | -8.615850e-47 |
Msa0187950 | Msa0797770 | 0.829049 | 6.397658e-55 | -8.615850e-47 |
Msa0187950 | Msa0801730 | 0.837560 | 4.836715e-57 | -8.615850e-47 |
Msa0187950 | Msa0801740 | 0.810656 | 1.034316e-50 | -8.615850e-47 |
Msa0187950 | Msa0808100 | 0.835166 | 1.965483e-56 | -8.615850e-47 |
Msa0187950 | Msa0811040 | 0.802081 | 6.645396e-49 | -8.615850e-47 |
Msa0187950 | Msa0817460 | 0.813352 | 2.673838e-51 | -8.615850e-47 |
Msa0187950 | Msa0817650 | 0.810880 | 9.250325e-51 | -8.615850e-47 |
Msa0187950 | Msa0818890 | 0.839227 | 1.797737e-57 | -8.615850e-47 |
Msa0187950 | Msa0820770 | 0.802683 | 4.994563e-49 | -8.615850e-47 |
Msa0187950 | Msa0820850 | 0.818088 | 2.352630e-52 | -8.615850e-47 |
Msa0187950 | Msa0831850 | 0.819714 | 1.004725e-52 | -8.615850e-47 |
Msa0187950 | Msa0832150 | 0.805809 | 1.115882e-49 | -8.615850e-47 |
Msa0187950 | Msa0832340 | 0.819625 | 1.052593e-52 | -8.615850e-47 |
Msa0187950 | Msa0835230 | 0.834885 | 2.313485e-56 | -8.615850e-47 |
Msa0187950 | Msa0844110 | 0.848966 | 4.375599e-60 | -8.615850e-47 |
Msa0187950 | Msa0844320 | 0.813434 | 2.565131e-51 | -8.615850e-47 |
Msa0187950 | Msa0849030 | 0.800867 | 1.178111e-48 | -8.615850e-47 |
Msa0187950 | Msa0858130 | 0.800129 | 1.665610e-48 | -8.615850e-47 |
Msa0187950 | Msa0861090 | 0.804566 | 2.031724e-49 | -8.615850e-47 |
Msa0187950 | Msa0861130 | 0.821071 | 4.905328e-53 | -8.615850e-47 |
Msa0187950 | Msa0866400 | 0.820109 | 8.158027e-53 | -8.615850e-47 |
Msa0187950 | Msa0866410 | 0.829846 | 4.096806e-55 | -8.615850e-47 |
Msa0187950 | Msa0868160 | 0.837638 | 4.617993e-57 | -8.615850e-47 |
Msa0187950 | Msa0879600 | 0.997621 | 6.588936e-246 | -8.615850e-47 |
Msa0187950 | Msa0890550 | 0.824918 | 6.219712e-54 | -8.615850e-47 |
Msa0187950 | Msa0894710 | 0.804997 | 1.651475e-49 | -8.615850e-47 |
Msa0187950 | Msa0905160 | 0.807161 | 5.786149e-50 | -8.615850e-47 |
Msa0187950 | Msa0909110 | 0.833823 | 4.272704e-56 | -8.615850e-47 |
Msa0187950 | Msa0918390 | 0.815951 | 7.104906e-52 | -8.615850e-47 |
Msa0187950 | Msa0923870 | 0.833017 | 6.787739e-56 | -8.615850e-47 |
Msa0187950 | Msa0925290 | 0.804017 | 2.643009e-49 | -8.615850e-47 |
Msa0187950 | Msa0930860 | 0.817012 | 4.111109e-52 | -8.615850e-47 |
Msa0187950 | Msa0933100 | 0.813195 | 2.894347e-51 | -8.615850e-47 |
Msa0187950 | Msa0935410 | 0.823664 | 1.226124e-53 | -8.615850e-47 |
Msa0187950 | Msa0936390 | 0.812405 | 4.310158e-51 | -8.615850e-47 |
Msa0187950 | Msa0937150 | 0.808149 | 3.568339e-50 | -8.615850e-47 |
Msa0187950 | Msa0942550 | -0.806423 | 8.287058e-50 | -8.615850e-47 |
Msa0187950 | Msa0958030 | 0.807988 | 3.861781e-50 | -8.615850e-47 |
Msa0187950 | Msa0958920 | 0.814608 | 1.412851e-51 | -8.615850e-47 |
Msa0187950 | Msa0962840 | 0.807679 | 4.492117e-50 | -8.615850e-47 |
Msa0187950 | Msa0976670 | 0.800243 | 1.579372e-48 | -8.615850e-47 |
Msa0187950 | Msa0979100 | 0.807023 | 6.187333e-50 | -8.615850e-47 |
Msa0187950 | Msa0986510 | 0.804505 | 2.091364e-49 | -8.615850e-47 |
Msa0187950 | Msa0990580 | 0.803811 | 2.916814e-49 | -8.615850e-47 |
Msa0187950 | Msa0992580 | 0.830796 | 2.400378e-55 | -8.615850e-47 |
Msa0187950 | Msa0992600 | 0.851301 | 9.702904e-61 | -8.615850e-47 |
Msa0187950 | Msa0999100 | 0.840113 | 1.057412e-57 | -8.615850e-47 |
Msa0187950 | Msa1003990 | 0.852370 | 4.828281e-61 | -8.615850e-47 |
Msa0187950 | Msa1011090 | 0.821306 | 4.331529e-53 | -8.615850e-47 |
Msa0187950 | Msa1023920 | 0.822330 | 2.510078e-53 | -8.615850e-47 |
Msa0187950 | Msa1026940 | 0.805083 | 1.584389e-49 | -8.615850e-47 |
Msa0187950 | Msa1028590 | 0.807318 | 5.359699e-50 | -8.615850e-47 |
Msa0187950 | Msa1032200 | 0.807304 | 5.395422e-50 | -8.615850e-47 |
Msa0187950 | Msa1034270 | 0.803129 | 4.039293e-49 | -8.615850e-47 |
Msa0187950 | Msa1034280 | 0.801817 | 7.528135e-49 | -8.615850e-47 |
Msa0187950 | Msa1034290 | 0.810893 | 9.188380e-51 | -8.615850e-47 |
Msa0187950 | Msa1042660 | 0.805188 | 1.505639e-49 | -8.615850e-47 |
Msa0187950 | Msa1063420 | 0.823935 | 1.059567e-53 | -8.615850e-47 |
Msa0187950 | Msa1068480 | 0.803409 | 3.534793e-49 | -8.615850e-47 |
Msa0187950 | Msa1080270 | 0.827895 | 1.214926e-54 | -8.615850e-47 |
Msa0187950 | Msa1087990 | 0.800832 | 1.197771e-48 | -8.615850e-47 |
Msa0187950 | Msa1096060 | 0.820978 | 5.153475e-53 | -8.615850e-47 |
Msa0187950 | Msa1102790 | 0.802270 | 6.074476e-49 | -8.615850e-47 |
Msa0187950 | Msa1105190 | 0.805060 | 1.601540e-49 | -8.615850e-47 |
Msa0187950 | Msa1107900 | 0.819956 | 8.846579e-53 | -8.615850e-47 |
Msa0187950 | Msa1115430 | 0.808690 | 2.735563e-50 | -8.615850e-47 |
Msa0187950 | Msa1123710 | -0.807716 | 4.411960e-50 | -8.615850e-47 |
Msa0187950 | Msa1124540 | -0.802823 | 4.672089e-49 | -8.615850e-47 |
Msa0187950 | Msa1130530 | 0.833806 | 4.316300e-56 | -8.615850e-47 |
Msa0187950 | Msa1143020 | 0.806728 | 7.146222e-50 | -8.615850e-47 |
Msa0187950 | Msa1144040 | 0.825617 | 4.251765e-54 | -8.615850e-47 |
Msa0187950 | Msa1144890 | 0.809103 | 2.232944e-50 | -8.615850e-47 |
Msa0187950 | Msa1162780 | 0.801911 | 7.199846e-49 | -8.615850e-47 |
Msa0187950 | Msa1169850 | -0.810797 | 9.641536e-51 | -8.615850e-47 |
Msa0187950 | Msa1174850 | 0.804124 | 2.510913e-49 | -8.615850e-47 |
Msa0187950 | Msa1177780 | 0.806166 | 9.387178e-50 | -8.615850e-47 |
Msa0187950 | Msa1178110 | 0.846362 | 2.278127e-59 | -8.615850e-47 |
Msa0187950 | Msa1183100 | -0.823571 | 1.289018e-53 | -8.615850e-47 |
Msa0187950 | Msa1185980 | 0.801241 | 9.878826e-49 | -8.615850e-47 |
Msa0187950 | Msa1203010 | 0.800627 | 1.319058e-48 | -8.615850e-47 |
Msa0187950 | Msa1207310 | 0.816221 | 6.182987e-52 | -8.615850e-47 |
Msa0187950 | Msa1207350 | 0.803456 | 3.455977e-49 | -8.615850e-47 |
Msa0187950 | Msa1207470 | -0.832791 | 7.728038e-56 | -8.615850e-47 |
Msa0187950 | Msa1215920 | 0.818350 | 2.052444e-52 | -8.615850e-47 |
Msa0187950 | Msa1224480 | 0.831568 | 1.550826e-55 | -8.615850e-47 |
Msa0187950 | Msa1224580 | -0.819628 | 1.051001e-52 | -8.615850e-47 |
Msa0187950 | Msa1236890 | 0.893045 | 9.053377e-75 | -8.615850e-47 |
Msa0187950 | Msa1237980 | 0.850420 | 1.717573e-60 | -8.615850e-47 |
Msa0187950 | Msa1251080 | 0.804731 | 1.876901e-49 | -8.615850e-47 |
Msa0187950 | Msa1257800 | -0.820228 | 7.664699e-53 | -8.615850e-47 |
Msa0187950 | Msa1262210 | 0.807394 | 5.165540e-50 | -8.615850e-47 |
Msa0187950 | Msa1263290 | -0.802309 | 5.963081e-49 | -8.615850e-47 |
Msa0187950 | Msa1270660 | 0.835681 | 1.456255e-56 | -8.615850e-47 |
Msa0187950 | Msa1270730 | 0.832628 | 8.483489e-56 | -8.615850e-47 |
Msa0187950 | Msa1276440 | 0.816341 | 5.813775e-52 | -8.615850e-47 |
Msa0187950 | Msa1278580 | 0.801554 | 8.525660e-49 | -8.615850e-47 |
Msa0187950 | Msa1281510 | 0.810408 | 1.169754e-50 | -8.615850e-47 |
Msa0187950 | Msa1295330 | 0.804117 | 2.520019e-49 | -8.615850e-47 |
Msa0187950 | Msa1297290 | 0.800085 | 1.700342e-48 | -8.615850e-47 |
Msa0187950 | Msa1306920 | 0.806536 | 7.842674e-50 | -8.615850e-47 |
Msa0187950 | Msa1320620 | 0.800245 | 1.577621e-48 | -8.615850e-47 |
Msa0187950 | Msa1322200 | 0.814213 | 1.727170e-51 | -8.615850e-47 |
Msa0187950 | Msa1325430 | 0.811474 | 6.875726e-51 | -8.615850e-47 |
Msa0187950 | Msa1325860 | -0.814351 | 1.610377e-51 | -8.615850e-47 |
Msa0187950 | Msa1331320 | 0.804552 | 2.044684e-49 | -8.615850e-47 |
Msa0187950 | Msa1332050 | 0.805839 | 1.099581e-49 | -8.615850e-47 |
Msa0187950 | Msa1333730 | 0.819516 | 1.114762e-52 | -8.615850e-47 |
Msa0187950 | Msa1335230 | 0.806010 | 1.012391e-49 | -8.615850e-47 |
Msa0187950 | Msa1338770 | 0.813505 | 2.474648e-51 | -8.615850e-47 |
Msa0187950 | Msa1341490 | 0.821191 | 4.603302e-53 | -8.615850e-47 |
Msa0187950 | Msa1348470 | -0.805903 | 1.066381e-49 | -8.615850e-47 |
Msa0187950 | Msa1357890 | 0.817200 | 3.729799e-52 | -8.615850e-47 |
Msa0187950 | Msa1359560 | 0.802599 | 5.197290e-49 | -8.615850e-47 |
Msa0187950 | Msa1364830 | 0.806992 | 6.282975e-50 | -8.615850e-47 |
Msa0187950 | Msa1368360 | 0.830023 | 3.708255e-55 | -8.615850e-47 |
Msa0187950 | Msa1371940 | 0.818369 | 2.032322e-52 | -8.615850e-47 |
Msa0187950 | Msa1372150 | 0.830621 | 2.648868e-55 | -8.615850e-47 |
Msa0187950 | Msa1372240 | 0.812595 | 3.916746e-51 | -8.615850e-47 |
Msa0187950 | Msa1374470 | 0.818116 | 2.318935e-52 | -8.615850e-47 |
Msa0187950 | Msa1374710 | 0.991058 | 1.120368e-185 | -8.615850e-47 |
Msa0187950 | Msa1378410 | 0.809123 | 2.210561e-50 | -8.615850e-47 |
Msa0187950 | Msa1382790 | 0.821021 | 5.037804e-53 | -8.615850e-47 |
Msa0187950 | Msa1385460 | 0.806442 | 8.211390e-50 | -8.615850e-47 |
Msa0187950 | Msa1392260 | 0.805609 | 1.228993e-49 | -8.615850e-47 |
Msa0187950 | Msa1394310 | 0.809759 | 1.614404e-50 | -8.615850e-47 |
Msa0187950 | Msa1397120 | 0.824853 | 6.444411e-54 | -8.615850e-47 |
Msa0187950 | Msa1398090 | 0.805603 | 1.232801e-49 | -8.615850e-47 |
Msa0187950 | Msa1401460 | 0.837322 | 5.565062e-57 | -8.615850e-47 |
Msa0187950 | Msa1403340 | 0.844450 | 7.506293e-59 | -8.615850e-47 |
Msa0187950 | Msa1403890 | 0.819561 | 1.088817e-52 | -8.615850e-47 |
Msa0187950 | Msa1407580 | 0.803727 | 3.035857e-49 | -8.615850e-47 |
Msa0187950 | Msa1412130 | 0.808894 | 2.475287e-50 | -8.615850e-47 |
Msa0187950 | Msa1423820 | 0.811264 | 7.638296e-51 | -8.615850e-47 |
Msa0187950 | Msa1425260 | 0.823879 | 1.092068e-53 | -8.615850e-47 |
Msa0187950 | Msa1426570 | 0.833915 | 4.052333e-56 | -8.615850e-47 |
Msa0187950 | Msa1427230 | 0.807483 | 4.945817e-50 | -8.615850e-47 |
Msa0187950 | Msa1428780 | 0.834176 | 3.486183e-56 | -8.615850e-47 |
Msa0187950 | Msa1437910 | 0.800499 | 1.400719e-48 | -8.615850e-47 |
Msa0187950 | Msa1443850 | 0.840208 | 9.987822e-58 | -8.615850e-47 |
Msa0187950 | Msa1444260 | 0.815280 | 1.002104e-51 | -8.615850e-47 |
Msa0187950 | Msa1453560 | 0.806564 | 7.738288e-50 | -8.615850e-47 |
Msa0187950 | Msa1460830 | 0.801651 | 8.143723e-49 | -8.615850e-47 |
Msa0187950 | Msa1462070 | 0.812472 | 4.167088e-51 | -8.615850e-47 |
Msa0187950 | Msa1462930 | 0.808136 | 3.591160e-50 | -8.615850e-47 |
Msa0187950 | Msa1466540 | 0.806865 | 6.684082e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187950 | MtrunA17_Chr8g0347511 | 99.541 | 218 | 1 | 0 | 1 | 218 | 1 | 218 | 5.41e-154 | 425 |
Msa0187950 | MtrunA17_Chr8g0376831 | 52.344 | 128 | 59 | 2 | 1 | 127 | 1 | 127 | 1.02e-40 | 137 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187950 | AT5G12230.1 | 63.229 | 223 | 75 | 3 | 1 | 218 | 1 | 221 | 3.73e-61 | 191 |
Msa0187950 | AT5G19480.3 | 60.000 | 215 | 77 | 3 | 1 | 214 | 1 | 207 | 2.31e-56 | 178 |
Msa0187950 | AT5G19480.2 | 60.000 | 215 | 77 | 3 | 1 | 214 | 1 | 207 | 2.31e-56 | 178 |
Msa0187950 | AT5G19480.1 | 60.000 | 215 | 77 | 3 | 1 | 214 | 1 | 207 | 2.31e-56 | 178 |
Msa0187950 | AT5G19480.4 | 60.000 | 215 | 77 | 3 | 1 | 214 | 1 | 207 | 2.31e-56 | 178 |
Find 83 sgRNAs with CRISPR-Local
Find 461 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGTTAATTTGTAAACTATA+TGG | 0.188175 | 2_1:+2851413 | Msa0187950:three_prime_UTR |
TTCCACCCGTCAGTAATATT+AGG | 0.221664 | 2_1:-2851453 | None:intergenic |
TTTCTTCTTCTTTCACTGTT+TGG | 0.231758 | 2_1:+2844883 | Msa0187950:five_prime_UTR |
CATCCGCGATGTTAAATAAA+TGG | 0.263943 | 2_1:-2851380 | None:intergenic |
TCCACCCGTCAGTAATATTA+GGG | 0.318124 | 2_1:-2851452 | None:intergenic |
AAGAAGAAGAAAGGGATTAA+AGG | 0.326969 | 2_1:-2844872 | None:intergenic |
AGGATAACTGAAATAACTAT+TGG | 0.351103 | 2_1:+2851321 | Msa0187950:three_prime_UTR |
AATAACCGACAGCTTTAATC+AGG | 0.352935 | 2_1:+2846506 | Msa0187950:intron |
GGATAACTGAAATAACTATT+GGG | 0.353682 | 2_1:+2851322 | Msa0187950:three_prime_UTR |
TGGGAGCTGTTTCCCTTAGT+TGG | 0.360962 | 2_1:-2847283 | None:intergenic |
ATCGCGGATGGATCTGTATA+TGG | 0.371320 | 2_1:+2851393 | Msa0187950:three_prime_UTR |
AGAAGAAGAAAGGGATTAAA+GGG | 0.373158 | 2_1:-2844871 | None:intergenic |
GTGTCAATTTGAAGGTGATT+TGG | 0.382763 | 2_1:+2845129 | Msa0187950:five_prime_UTR |
ATCCATGATTCAATCTTTCA+TGG | 0.391592 | 2_1:-2846546 | None:intergenic |
GGTTAATTTGTAAACTATAT+GGG | 0.393345 | 2_1:+2851414 | Msa0187950:three_prime_UTR |
AATCTTTGTGTTTGTTCCTT+CGG | 0.399112 | 2_1:-2844794 | None:intergenic |
AGCTCAAGAATTGATGAGTT+GGG | 0.406971 | 2_1:+2848379 | Msa0187950:CDS |
AGCATAAGAAGCACAAAGAC+AGG | 0.416670 | 2_1:+2847531 | Msa0187950:CDS |
AGTGCGGTATTAATTTGAAA+TGG | 0.421690 | 2_1:-2847067 | None:intergenic |
AAAAGGAGATGGCATGCAAT+TGG | 0.425102 | 2_1:+2847175 | Msa0187950:CDS |
TCAAGGAGGCTTTCCAACTA+AGG | 0.441770 | 2_1:+2847270 | Msa0187950:CDS |
AAAGGAATACCAACAATTGC+AGG | 0.443447 | 2_1:+2847476 | Msa0187950:CDS |
CTTTGTTGAGGTTTCAGTGT+TGG | 0.445650 | 2_1:-2844820 | None:intergenic |
GCGATGTTAAATAAATGGTA+TGG | 0.449657 | 2_1:-2851375 | None:intergenic |
AAACAGTGAAAGAAGAAGAA+AGG | 0.465344 | 2_1:-2844881 | None:intergenic |
TTTCTTTGAGTGATCAGCAC+TGG | 0.476818 | 2_1:-2847660 | None:intergenic |
TCAAGAAATCTGAAAATGTC+AGG | 0.479687 | 2_1:-2848496 | None:intergenic |
TTTCCCTAATAGGCGGAGAA+AGG | 0.487140 | 2_1:+2847458 | Msa0187950:intron |
ACAGGGATAAGGACAAGGAC+AGG | 0.491569 | 2_1:+2847549 | Msa0187950:CDS |
AACAGTGAAAGAAGAAGAAA+GGG | 0.492849 | 2_1:-2844880 | None:intergenic |
AATTCACCTGATGGTGGAAA+AGG | 0.493016 | 2_1:+2851070 | Msa0187950:three_prime_UTR |
CACTACCTGCACAGTGTAGT+AGG | 0.493509 | 2_1:+2847137 | Msa0187950:CDS |
GAGCTCAAGAATTGATGAGT+TGG | 0.493987 | 2_1:+2848378 | Msa0187950:CDS |
CATTTATTTAACATCGCGGA+TGG | 0.494536 | 2_1:+2851381 | Msa0187950:three_prime_UTR |
GGAGACACAGAAGTAAGAAA+AGG | 0.503306 | 2_1:+2847158 | Msa0187950:CDS |
CAATTTGAAGGTGATTTGGT+GGG | 0.504611 | 2_1:+2845133 | Msa0187950:five_prime_UTR |
CTCAAAGAAACACCATGAAA+AGG | 0.506144 | 2_1:+2847673 | Msa0187950:CDS |
AACCATGAAAGATTGAATCA+TGG | 0.511783 | 2_1:+2846544 | Msa0187950:exon |
TTGTGTTTGTGTCAATTTGA+AGG | 0.514281 | 2_1:+2845121 | Msa0187950:five_prime_UTR |
ATCATGATAATCTTATAGTC+AGG | 0.516918 | 2_1:-2851043 | None:intergenic |
TCCGCGATTGACACAGGAAG+CGG | 0.522644 | 2_1:-2847110 | None:intergenic |
TAAAGGAAAGATCTTTGTTG+AGG | 0.528082 | 2_1:-2844832 | None:intergenic |
TCGGATACAGCCTTTCGACT+TGG | 0.534768 | 2_1:+2847241 | Msa0187950:CDS |
TCAATTTGAAGGTGATTTGG+TGG | 0.537156 | 2_1:+2845132 | Msa0187950:five_prime_UTR |
CGATGTTAAATAAATGGTAT+GGG | 0.542155 | 2_1:-2851374 | None:intergenic |
GAAGCACAAAGACAGGGATA+AGG | 0.543181 | 2_1:+2847538 | Msa0187950:CDS |
CACGCCCTAATATTACTGAC+GGG | 0.543769 | 2_1:+2851448 | Msa0187950:three_prime_UTR |
TGACTATAAGATTATCATGA+TGG | 0.546672 | 2_1:+2851045 | Msa0187950:three_prime_UTR |
CAAATGACAACAACCAATTG+AGG | 0.561634 | 2_1:-2848454 | None:intergenic |
AATTTGTAAACTATATGGGA+TGG | 0.568096 | 2_1:+2851418 | Msa0187950:three_prime_UTR |
CAAGGAGGCTTTCCAACTAA+GGG | 0.568109 | 2_1:+2847271 | Msa0187950:CDS |
GCTCAAGAATTGATGAGTTG+GGG | 0.569389 | 2_1:+2848380 | Msa0187950:CDS |
TCAGGACCGAGGGAGTTGAC+AGG | 0.569665 | 2_1:+2847026 | Msa0187950:intron |
TCTTACAGCAGGCAAATCGA+TGG | 0.570777 | 2_1:-2847303 | None:intergenic |
CTGATGGTGGAAAAGGAAGC+AGG | 0.572261 | 2_1:+2851077 | Msa0187950:three_prime_UTR |
TCACGCCCTAATATTACTGA+CGG | 0.572509 | 2_1:+2851447 | Msa0187950:three_prime_UTR |
TTTCGACTTGGATATACTCA+AGG | 0.572941 | 2_1:+2847253 | Msa0187950:CDS |
GATAACTGAAATAACTATTG+GGG | 0.573323 | 2_1:+2851323 | Msa0187950:three_prime_UTR |
CTTACAGCAGGCAAATCGAT+GGG | 0.583764 | 2_1:-2847302 | None:intergenic |
TGTGTGTCCGCGATTGACAC+AGG | 0.584301 | 2_1:-2847116 | None:intergenic |
ACAGCACCTGTCAACTCCCT+CGG | 0.592323 | 2_1:-2847032 | None:intergenic |
TGTCTCCTACTACACTGTGC+AGG | 0.593991 | 2_1:-2847142 | None:intergenic |
TTGTTGTCATTTGTATGTGA+AGG | 0.602533 | 2_1:+2848464 | Msa0187950:three_prime_UTR |
GCATAAGAAGCACAAAGACA+GGG | 0.602938 | 2_1:+2847532 | Msa0187950:CDS |
ACAGAAGTAAGAAAAGGAGA+TGG | 0.606393 | 2_1:+2847164 | Msa0187950:CDS |
GAGGGAGTTGACAGGTGCTG+TGG | 0.611611 | 2_1:+2847034 | Msa0187950:CDS |
GATTGAATCATGGATCCTGA+AGG | 0.613845 | 2_1:+2846554 | Msa0187950:exon |
CAAAGACAGGGATAAGGACA+AGG | 0.620436 | 2_1:+2847544 | Msa0187950:CDS |
GCCGCTTCCTGTGTCAATCG+CGG | 0.625354 | 2_1:+2847109 | Msa0187950:CDS |
CAGGGATAAGGACAAGGACA+GGG | 0.626401 | 2_1:+2847550 | Msa0187950:CDS |
CAGAAGCAAAGACAAAGACA+AGG | 0.629036 | 2_1:+2847604 | Msa0187950:CDS |
CGACTTGGATATACTCAAGG+AGG | 0.629284 | 2_1:+2847256 | Msa0187950:CDS |
GCCCTAATATTACTGACGGG+TGG | 0.644035 | 2_1:+2851451 | Msa0187950:three_prime_UTR |
ATAACTGAAATAACTATTGG+GGG | 0.648226 | 2_1:+2851324 | Msa0187950:three_prime_UTR |
TCTCAAGAGAGACAAGTGCT+CGG | 0.651092 | 2_1:+2847222 | Msa0187950:CDS |
TTGAGTATATCCAAGTCGAA+AGG | 0.652260 | 2_1:-2847251 | None:intergenic |
TTTCAGAAGAGGAAGCATGA+CGG | 0.652327 | 2_1:+2848163 | Msa0187950:intron |
ATGGTGAATTCACCTGATGG+TGG | 0.663661 | 2_1:+2851064 | Msa0187950:three_prime_UTR |
CTCAAGAATTGATGAGTTGG+GGG | 0.664098 | 2_1:+2848381 | Msa0187950:CDS |
GAAGCACAAACATCGTCACA+AGG | 0.684990 | 2_1:+2847580 | Msa0187950:CDS |
ATACCATTTATTTAACATCG+CGG | 0.702245 | 2_1:+2851377 | Msa0187950:three_prime_UTR |
ATGATGGTGAATTCACCTGA+TGG | 0.706691 | 2_1:+2851061 | Msa0187950:three_prime_UTR |
ACAATCACGAGTACTACCGA+AGG | 0.714721 | 2_1:+2844778 | Msa0187950:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTAATTTTCAAATTATTAC+CGG | + | chr2_1:2845906-2845925 | Msa0187950:intron | 10.0% |
!!! | AATGATTTATATAATTTTGT+TGG | + | chr2_1:2846395-2846414 | Msa0187950:intron | 10.0% |
!!! | AATAAAGATTTTATAGAATT+AGG | - | chr2_1:2846633-2846652 | None:intergenic | 10.0% |
!! | AAGAAAAAAATATATAATCA+CGG | - | chr2_1:2849065-2849084 | None:intergenic | 10.0% |
!! | TAAAGAAAAAATAATCATTT+AGG | - | chr2_1:2850112-2850131 | None:intergenic | 10.0% |
!! | AATAAATTAAATATATGTAG+CGG | + | chr2_1:2850399-2850418 | Msa0187950:intron | 10.0% |
!! | AAATAATTATAATAATTTGG+GGG | - | chr2_1:2850814-2850833 | None:intergenic | 10.0% |
!! | GAAATAATTATAATAATTTG+GGG | - | chr2_1:2850815-2850834 | None:intergenic | 10.0% |
!! | GTGAAATAATTATAATAATT+TGG | - | chr2_1:2850817-2850836 | None:intergenic | 10.0% |
!! | TTATGTATTCATTGAAAATT+TGG | - | chr2_1:2844966-2844985 | None:intergenic | 15.0% |
!! | GAACATTTACAAAATTATTA+GGG | - | chr2_1:2846476-2846495 | None:intergenic | 15.0% |
!! | AGAACATTTACAAAATTATT+AGG | - | chr2_1:2846477-2846496 | None:intergenic | 15.0% |
!!! | TTAAATTTTTTGGAATTGAA+TGG | + | chr2_1:2846828-2846847 | Msa0187950:intron | 15.0% |
!! | TCAGAAAAATTTAAAAATTG+TGG | - | chr2_1:2848540-2848559 | None:intergenic | 15.0% |
!! | TTATGATCAATATAAAATGT+TGG | + | chr2_1:2849961-2849980 | Msa0187950:intron | 15.0% |
!! | AATAATTATAATAATTTGGG+GGG | - | chr2_1:2850813-2850832 | None:intergenic | 15.0% |
!! | TTATTATAATTATTTCACTC+TGG | + | chr2_1:2850819-2850838 | Msa0187950:intron | 15.0% |
!! | TATTATAATTATTTCACTCT+GGG | + | chr2_1:2850820-2850839 | Msa0187950:intron | 15.0% |
!! | GTTCTCACAAAAATATATAA+AGG | - | chr2_1:2844852-2844871 | None:intergenic | 20.0% |
!! | AGTCAAGAATAACAATAAAA+AGG | - | chr2_1:2844997-2845016 | None:intergenic | 20.0% |
!!! | TTTTGAAGTTGGAATTTTTT+AGG | + | chr2_1:2845217-2845236 | Msa0187950:intron | 20.0% |
!!! | TTTGAAGTTGGAATTTTTTA+GGG | + | chr2_1:2845218-2845237 | Msa0187950:intron | 20.0% |
!!! | TATTAATGTGAAGAAGATTT+TGG | + | chr2_1:2845266-2845285 | Msa0187950:intron | 20.0% |
!!! | ATTAATGTGAAGAAGATTTT+GGG | + | chr2_1:2845267-2845286 | Msa0187950:intron | 20.0% |
!!! | TGTTAATTTTTTTTGAACGT+TGG | + | chr2_1:2845351-2845370 | Msa0187950:intron | 20.0% |
!! | TGAATATTTAACAATCTTCA+AGG | + | chr2_1:2845377-2845396 | Msa0187950:intron | 20.0% |
!!! | AGAATGTTTTTTATTGTCTA+TGG | + | chr2_1:2845987-2846006 | Msa0187950:intron | 20.0% |
!!! | TTTTATTGTCTATGGTTTTT+TGG | + | chr2_1:2845995-2846014 | Msa0187950:intron | 20.0% |
!! | TATTTCAATTTCTCGAAATA+TGG | + | chr2_1:2846019-2846038 | Msa0187950:intron | 20.0% |
!!! | AGTTAGTTTGTTTAAGTTTT+GGG | + | chr2_1:2846270-2846289 | Msa0187950:intron | 20.0% |
!!! | TTATCACCTGTTAAATTTTT+TGG | + | chr2_1:2846818-2846837 | Msa0187950:intron | 20.0% |
!! | TCAATTCCAAAAAATTTAAC+AGG | - | chr2_1:2846827-2846846 | None:intergenic | 20.0% |
!!! | TATTGTGCAAACTTTAAAAA+GGG | - | chr2_1:2846920-2846939 | None:intergenic | 20.0% |
!!! | TTTGAACAAACATCTATTTT+CGG | + | chr2_1:2848030-2848049 | Msa0187950:intron | 20.0% |
!!! | ATTCTTTTTTGGAGTTTTAA+TGG | + | chr2_1:2848580-2848599 | Msa0187950:intron | 20.0% |
!!! | TTCTTTTTTGGAGTTTTAAT+GGG | + | chr2_1:2848581-2848600 | Msa0187950:intron | 20.0% |
!! | TTGCAAATAAAAGCAATTAA+GGG | - | chr2_1:2848610-2848629 | None:intergenic | 20.0% |
!! | TTTGCAAATAAAAGCAATTA+AGG | - | chr2_1:2848611-2848630 | None:intergenic | 20.0% |
!! | CTTATAACTAGAAATCAAAA+GGG | - | chr2_1:2848649-2848668 | None:intergenic | 20.0% |
!! | TCTTATAACTAGAAATCAAA+AGG | - | chr2_1:2848650-2848669 | None:intergenic | 20.0% |
!!! | CAATCCATTCTTTTATTTAT+TGG | - | chr2_1:2849233-2849252 | None:intergenic | 20.0% |
!!! | TCCTATATTTTTTACATTAG+CGG | + | chr2_1:2850430-2850449 | Msa0187950:intron | 20.0% |
!!! | TGGTTAATTTGTAAACTATA+TGG | + | chr2_1:2851413-2851432 | Msa0187950:three_prime_UTR | 20.0% |
!!! | GGTTAATTTGTAAACTATAT+GGG | + | chr2_1:2851414-2851433 | Msa0187950:three_prime_UTR | 20.0% |
! | TTTACACACTATATCTATCA+TGG | + | chr2_1:2844932-2844951 | Msa0187950:intron | 25.0% |
! | TTACACACTATATCTATCAT+GGG | + | chr2_1:2844933-2844952 | Msa0187950:intron | 25.0% |
! | ATAAGCCAAAATCATCAATA+GGG | - | chr2_1:2845021-2845040 | None:intergenic | 25.0% |
! | AATAAGCCAAAATCATCAAT+AGG | - | chr2_1:2845022-2845041 | None:intergenic | 25.0% |
!!! | TTTTGGCTTATTTTGATGAA+AGG | + | chr2_1:2845030-2845049 | Msa0187950:intron | 25.0% |
!! | CTTTCGAAGAAATTTTTGTT+GGG | + | chr2_1:2845069-2845088 | Msa0187950:five_prime_UTR | 25.0% |
!! | TTTCGAAGAAATTTTTGTTG+GGG | + | chr2_1:2845070-2845089 | Msa0187950:five_prime_UTR | 25.0% |
!!! | GTTTTGATTGTTTTTGAAGT+TGG | + | chr2_1:2845206-2845225 | Msa0187950:intron | 25.0% |
!! | ATTAACAGCTTTTCAAAAAG+TGG | - | chr2_1:2845338-2845357 | None:intergenic | 25.0% |
! | ATATTTAACAATCTTCAAGG+TGG | + | chr2_1:2845380-2845399 | Msa0187950:intron | 25.0% |
!!! | TTCAGTTTTGAAAAGAAAAG+GGG | - | chr2_1:2845510-2845529 | None:intergenic | 25.0% |
!!! | GTTCAGTTTTGAAAAGAAAA+GGG | - | chr2_1:2845511-2845530 | None:intergenic | 25.0% |
! | TCAGTTTCATAAAATCAACA+GGG | - | chr2_1:2845552-2845571 | None:intergenic | 25.0% |
! | TTCAGTTTCATAAAATCAAC+AGG | - | chr2_1:2845553-2845572 | None:intergenic | 25.0% |
! | TTACAATCTAGATCATCTAA+TGG | + | chr2_1:2845583-2845602 | Msa0187950:intron | 25.0% |
! | ATGCTTCTCTTGATATAAAT+TGG | + | chr2_1:2845635-2845654 | Msa0187950:intron | 25.0% |
! | AACGTATCAACTGTATTATT+TGG | + | chr2_1:2845759-2845778 | Msa0187950:intron | 25.0% |
! | ACGTATCAACTGTATTATTT+GGG | + | chr2_1:2845760-2845779 | Msa0187950:intron | 25.0% |
! | AATGATGTGAATGAATTCTA+TGG | + | chr2_1:2846050-2846069 | Msa0187950:intron | 25.0% |
!!! | CATGGATTAATATTTTCTGT+TGG | + | chr2_1:2846106-2846125 | Msa0187950:intron | 25.0% |
! | CAAAACTTAAACAAACTAAC+TGG | - | chr2_1:2846271-2846290 | None:intergenic | 25.0% |
!!! | CAGTTAGTTTGTTTAAGTTT+TGG | + | chr2_1:2846269-2846288 | Msa0187950:intron | 25.0% |
!!! | GTTAGTTTGTTTAAGTTTTG+GGG | + | chr2_1:2846271-2846290 | Msa0187950:intron | 25.0% |
!!! | ATTGTCATGGTTTTTTGAAA+TGG | + | chr2_1:2846326-2846345 | Msa0187950:intron | 25.0% |
! | TTCTTTACCGTAATTTAAGA+GGG | + | chr2_1:2846359-2846378 | Msa0187950:intron | 25.0% |
!! | GACAAATGATGGTTTTTATA+TGG | + | chr2_1:2846427-2846446 | Msa0187950:intron | 25.0% |
! | GTTCTGATTTCATATGTTTA+TGG | + | chr2_1:2846686-2846705 | Msa0187950:intron | 25.0% |
! | GTTATCTAATTGACAATACT+TGG | + | chr2_1:2846723-2846742 | Msa0187950:intron | 25.0% |
!! | ATTGTGCAAACTTTAAAAAG+GGG | - | chr2_1:2846919-2846938 | None:intergenic | 25.0% |
!! | GTATTGTGCAAACTTTAAAA+AGG | - | chr2_1:2846921-2846940 | None:intergenic | 25.0% |
! | TAATTCTTGCTGAAATCATT+TGG | + | chr2_1:2847359-2847378 | Msa0187950:intron | 25.0% |
!! | AAATTTCTTCAACCTTTTCA+TGG | - | chr2_1:2847688-2847707 | None:intergenic | 25.0% |
! | GATATAGTGATGTTAAATAG+CGG | + | chr2_1:2847841-2847860 | Msa0187950:intron | 25.0% |
! | CATAATATTCTGTGCTAAAT+AGG | - | chr2_1:2847966-2847985 | None:intergenic | 25.0% |
! | AGATATTGAGCAAAAGTAAA+AGG | - | chr2_1:2848144-2848163 | None:intergenic | 25.0% |
!!! | CTATGTACTTCATTCTTTTT+TGG | + | chr2_1:2848569-2848588 | Msa0187950:intron | 25.0% |
!!! | TCTTTTTTGGAGTTTTAATG+GGG | + | chr2_1:2848582-2848601 | Msa0187950:intron | 25.0% |
! | TCAATTTCAAATGTACTTGT+TGG | + | chr2_1:2848908-2848927 | Msa0187950:intron | 25.0% |
! | CAATTTCAAATGTACTTGTT+GGG | + | chr2_1:2848909-2848928 | Msa0187950:intron | 25.0% |
!! | AATTTCAAATGTACTTGTTG+GGG | + | chr2_1:2848910-2848929 | Msa0187950:intron | 25.0% |
! | GTTGCCAATAAATAAAAGAA+TGG | + | chr2_1:2849226-2849245 | Msa0187950:intron | 25.0% |
! | AGAAAATATTGTGAGAGAAA+GGG | + | chr2_1:2849534-2849553 | Msa0187950:intron | 25.0% |
!! | TTATTTTCTTCAGTAACTCA+AGG | - | chr2_1:2849628-2849647 | None:intergenic | 25.0% |
!!! | AATAAGTTTTTGTTGTACTG+AGG | + | chr2_1:2849841-2849860 | Msa0187950:intron | 25.0% |
! | TATATATAAGAGGGATTTAG+AGG | + | chr2_1:2849902-2849921 | Msa0187950:intron | 25.0% |
! | ATATATAAGAGGGATTTAGA+GGG | + | chr2_1:2849903-2849922 | Msa0187950:intron | 25.0% |
!! | GTTGTCATTTAAGAGAATTA+AGG | + | chr2_1:2849930-2849949 | Msa0187950:intron | 25.0% |
! | TTAAGAGAATTAAGGTCTTT+AGG | + | chr2_1:2849938-2849957 | Msa0187950:intron | 25.0% |
!! | AAAATAATCATTTAGGACAC+CGG | - | chr2_1:2850105-2850124 | None:intergenic | 25.0% |
! | ATATAATCAACTATAATGCC+CGG | - | chr2_1:2850237-2850256 | None:intergenic | 25.0% |
! | ACCGCTAATGTAAAAAATAT+AGG | - | chr2_1:2850434-2850453 | None:intergenic | 25.0% |
! | AAAATAGATTGCAAAACTTC+CGG | - | chr2_1:2850627-2850646 | None:intergenic | 25.0% |
!! | CAATCTATTTTGTAGTCAAA+AGG | + | chr2_1:2850636-2850655 | Msa0187950:intron | 25.0% |
! | ATTATGCTGTGATAAAATAC+CGG | + | chr2_1:2850771-2850790 | Msa0187950:intron | 25.0% |
! | ATCATGATAATCTTATAGTC+AGG | - | chr2_1:2851046-2851065 | None:intergenic | 25.0% |
! | TGACTATAAGATTATCATGA+TGG | + | chr2_1:2851045-2851064 | Msa0187950:three_prime_UTR | 25.0% |
! | AGGATAACTGAAATAACTAT+TGG | + | chr2_1:2851321-2851340 | Msa0187950:three_prime_UTR | 25.0% |
! | GGATAACTGAAATAACTATT+GGG | + | chr2_1:2851322-2851341 | Msa0187950:three_prime_UTR | 25.0% |
! | GATAACTGAAATAACTATTG+GGG | + | chr2_1:2851323-2851342 | Msa0187950:three_prime_UTR | 25.0% |
! | ATAACTGAAATAACTATTGG+GGG | + | chr2_1:2851324-2851343 | Msa0187950:three_prime_UTR | 25.0% |
! | CGATGTTAAATAAATGGTAT+GGG | - | chr2_1:2851377-2851396 | None:intergenic | 25.0% |
! | ATACCATTTATTTAACATCG+CGG | + | chr2_1:2851377-2851396 | Msa0187950:three_prime_UTR | 25.0% |
! | AATTTGTAAACTATATGGGA+TGG | + | chr2_1:2851418-2851437 | Msa0187950:three_prime_UTR | 25.0% |
AATCTTTGTGTTTGTTCCTT+CGG | - | chr2_1:2844797-2844816 | None:intergenic | 30.0% | |
TAAAGGAAAGATCTTTGTTG+AGG | - | chr2_1:2844835-2844854 | None:intergenic | 30.0% | |
AGAAGAAGAAAGGGATTAAA+GGG | - | chr2_1:2844874-2844893 | None:intergenic | 30.0% | |
AAGAAGAAGAAAGGGATTAA+AGG | - | chr2_1:2844875-2844894 | None:intergenic | 30.0% | |
AACAGTGAAAGAAGAAGAAA+GGG | - | chr2_1:2844883-2844902 | None:intergenic | 30.0% | |
AAACAGTGAAAGAAGAAGAA+AGG | - | chr2_1:2844884-2844903 | None:intergenic | 30.0% | |
TTTCTTCTTCTTTCACTGTT+TGG | + | chr2_1:2844883-2844902 | Msa0187950:five_prime_UTR | 30.0% | |
! | GCTTTCGAAGAAATTTTTGT+TGG | + | chr2_1:2845068-2845087 | Msa0187950:intron | 30.0% |
TTGTGTTTGTGTCAATTTGA+AGG | + | chr2_1:2845121-2845140 | Msa0187950:five_prime_UTR | 30.0% | |
!!! | AGAAGATTTTGGGTTTTTTG+TGG | + | chr2_1:2845277-2845296 | Msa0187950:intron | 30.0% |
ACAGGATAAGAAACAATTGA+TGG | + | chr2_1:2845411-2845430 | Msa0187950:intron | 30.0% | |
!!! | GGTTCAGTTTTGAAAAGAAA+AGG | - | chr2_1:2845512-2845531 | None:intergenic | 30.0% |
TTTCACATGGATAGATACTA+TGG | - | chr2_1:2845611-2845630 | None:intergenic | 30.0% | |
!! | TTTTTGTTATGCTAGTGTGT+TGG | + | chr2_1:2845717-2845736 | Msa0187950:intron | 30.0% |
TTGAATGTAATCACATGTGT+CGG | - | chr2_1:2845882-2845901 | None:intergenic | 30.0% | |
! | TGTTTGCAGATTATTAGCTT+TGG | + | chr2_1:2846082-2846101 | Msa0187950:intron | 30.0% |
!! | GTTTGCAGATTATTAGCTTT+GGG | + | chr2_1:2846083-2846102 | Msa0187950:intron | 30.0% |
! | AAAGCATTTAGCTGTACAAT+AGG | + | chr2_1:2846219-2846238 | Msa0187950:intron | 30.0% |
AAGCATTTAGCTGTACAATA+GGG | + | chr2_1:2846220-2846239 | Msa0187950:intron | 30.0% | |
! | CAAGTTAAGTGTCTTTTTGT+TGG | + | chr2_1:2846303-2846322 | Msa0187950:intron | 30.0% |
CTCTTAAATTACGGTAAAGA+AGG | - | chr2_1:2846360-2846379 | None:intergenic | 30.0% | |
CTTCTTTACCGTAATTTAAG+AGG | + | chr2_1:2846358-2846377 | Msa0187950:intron | 30.0% | |
AACCATGAAAGATTGAATCA+TGG | + | chr2_1:2846544-2846563 | Msa0187950:exon | 30.0% | |
ATCCATGATTCAATCTTTCA+TGG | - | chr2_1:2846549-2846568 | None:intergenic | 30.0% | |
! | TAGTTGTTTATTTGCCCTTT+TGG | + | chr2_1:2846775-2846794 | Msa0187950:intron | 30.0% |
ACACAGAATGTCAAAAAACA+CGG | - | chr2_1:2846996-2847015 | None:intergenic | 30.0% | |
! | AGTGCGGTATTAATTTGAAA+TGG | - | chr2_1:2847070-2847089 | None:intergenic | 30.0% |
TTGCAGAAAAATTCATAGTG+CGG | - | chr2_1:2847086-2847105 | None:intergenic | 30.0% | |
! | ACTATGAATTTTTCTGCAAG+AGG | + | chr2_1:2847087-2847106 | Msa0187950:CDS | 30.0% |
! | TTCCTTGTATTTTCCCTAAT+AGG | + | chr2_1:2847448-2847467 | Msa0187950:intron | 30.0% |
!! | TTTGATTTTCCTGCAATTGT+TGG | - | chr2_1:2847488-2847507 | None:intergenic | 30.0% |
GACAAAAAGAAAGACAAAAG+CGG | + | chr2_1:2847626-2847645 | Msa0187950:CDS | 30.0% | |
ACAAAAAGAAAGACAAAAGC+GGG | + | chr2_1:2847627-2847646 | Msa0187950:CDS | 30.0% | |
TCAAGTAAATTTGCAATGAC+AGG | - | chr2_1:2847762-2847781 | None:intergenic | 30.0% | |
TGGACAATGATGTTAAATAC+CGG | + | chr2_1:2847885-2847904 | Msa0187950:intron | 30.0% | |
CATTTGCTCTACATACTATT+TGG | + | chr2_1:2848086-2848105 | Msa0187950:intron | 30.0% | |
GCACAAACATAAAAAGAGTA+AGG | + | chr2_1:2848207-2848226 | Msa0187950:CDS | 30.0% | |
! | TTGTTGTCATTTGTATGTGA+AGG | + | chr2_1:2848464-2848483 | Msa0187950:three_prime_UTR | 30.0% |
TCAAGAAATCTGAAAATGTC+AGG | - | chr2_1:2848499-2848518 | None:intergenic | 30.0% | |
! | TGACATTTTCAGATTTCTTG+AGG | + | chr2_1:2848498-2848517 | Msa0187950:three_prime_UTR | 30.0% |
AAGAATGAAGTACATAGTCA+TGG | - | chr2_1:2848566-2848585 | None:intergenic | 30.0% | |
ATAACTAGAAATCAAAAGGG+TGG | - | chr2_1:2848646-2848665 | None:intergenic | 30.0% | |
! | TTCTCAAATATTGGCTATAG+CGG | + | chr2_1:2848731-2848750 | Msa0187950:intron | 30.0% |
ATTTATTAGCAGCTATAACG+CGG | + | chr2_1:2848813-2848832 | Msa0187950:intron | 30.0% | |
AATCACGGTCTAAAAGAAAA+TGG | - | chr2_1:2849050-2849069 | None:intergenic | 30.0% | |
ATTCACATGTTTATCATCAC+TGG | - | chr2_1:2849417-2849436 | None:intergenic | 30.0% | |
TGATAAACATGTGAATGCAA+TGG | + | chr2_1:2849421-2849440 | Msa0187950:intron | 30.0% | |
! | TTCTCTCACAATATTTTCTG+TGG | - | chr2_1:2849533-2849552 | None:intergenic | 30.0% |
CAGAAAATATTGTGAGAGAA+AGG | + | chr2_1:2849533-2849552 | Msa0187950:intron | 30.0% | |
!!! | GGATTAGCTTTTACAGTATT+TGG | + | chr2_1:2849576-2849595 | Msa0187950:intron | 30.0% |
TATATAAGAGGGATTTAGAG+GGG | + | chr2_1:2849904-2849923 | Msa0187950:intron | 30.0% | |
TATGAGTGTTATATAGGTGT+CGG | - | chr2_1:2850159-2850178 | None:intergenic | 30.0% | |
TTAAATATATGTAGCGGTGT+CGG | + | chr2_1:2850405-2850424 | Msa0187950:intron | 30.0% | |
AGATAGAATGAAAGAAGATG+AGG | - | chr2_1:2850518-2850537 | None:intergenic | 30.0% | |
! | TATTGCTGTGTTTTGTAACT+TGG | + | chr2_1:2850581-2850600 | Msa0187950:intron | 30.0% |
ACCATTATTATGCTGTGATA+AGG | + | chr2_1:2850667-2850686 | Msa0187950:intron | 30.0% | |
! | AAGGCTTTGATAGAACATTA+TGG | + | chr2_1:2850686-2850705 | Msa0187950:intron | 30.0% |
AAGTGGAAAAAGAAAGAACT+CGG | + | chr2_1:2850921-2850940 | Msa0187950:intron | 30.0% | |
AGTTCACTAGCAATTCTATA+AGG | - | chr2_1:2851146-2851165 | None:intergenic | 30.0% | |
ATAGAATTGCTAGTGAACTT+TGG | + | chr2_1:2851147-2851166 | Msa0187950:intron | 30.0% | |
!! | GATCTAGAAGCTTTTTGTTT+AGG | + | chr2_1:2851301-2851320 | Msa0187950:three_prime_UTR | 30.0% |
GCGATGTTAAATAAATGGTA+TGG | - | chr2_1:2851378-2851397 | None:intergenic | 30.0% | |
!! | GACTACCCTATTGATGATTT+TGG | + | chr2_1:2845013-2845032 | Msa0187950:intron | 35.0% |
GTGTCAATTTGAAGGTGATT+TGG | + | chr2_1:2845129-2845148 | Msa0187950:five_prime_UTR | 35.0% | |
! | TCAATTTGAAGGTGATTTGG+TGG | + | chr2_1:2845132-2845151 | Msa0187950:five_prime_UTR | 35.0% |
!! | CAATTTGAAGGTGATTTGGT+GGG | + | chr2_1:2845133-2845152 | Msa0187950:five_prime_UTR | 35.0% |
! | TTGAGGATTTTTCACTCTTC+AGG | + | chr2_1:2845167-2845186 | Msa0187950:five_prime_UTR | 35.0% |
TTCAAGGTGGAAATTGAAAC+AGG | + | chr2_1:2845393-2845412 | Msa0187950:intron | 35.0% | |
!!! | AGTTTTGAAAAGAAAAGGGG+TGG | - | chr2_1:2845507-2845526 | None:intergenic | 35.0% |
CTCTTGATATAAATTGGTGC+TGG | + | chr2_1:2845641-2845660 | Msa0187950:intron | 35.0% | |
TGATGATTTCATGTGCGATT+TGG | + | chr2_1:2845783-2845802 | Msa0187950:intron | 35.0% | |
GATGATTTCATGTGCGATTT+GGG | + | chr2_1:2845784-2845803 | Msa0187950:intron | 35.0% | |
!! | TGTTTGTTTCGGTGCTTAAT+TGG | + | chr2_1:2845961-2845980 | Msa0187950:intron | 35.0% |
!!! | ATATTTTCTGTTGGCCTTAC+TGG | + | chr2_1:2846115-2846134 | Msa0187950:intron | 35.0% |
!!! | TATTTTCTGTTGGCCTTACT+GGG | + | chr2_1:2846116-2846135 | Msa0187950:intron | 35.0% |
AAAAACAAGTGTTCCCAGTA+AGG | - | chr2_1:2846132-2846151 | None:intergenic | 35.0% | |
TGTACAGCTAAATGCTTTGT+AGG | - | chr2_1:2846217-2846236 | None:intergenic | 35.0% | |
AGCATTTAGCTGTACAATAG+GGG | + | chr2_1:2846221-2846240 | Msa0187950:intron | 35.0% | |
!!! | TGTTTAAGTTTTGGGGTTTG+TGG | + | chr2_1:2846278-2846297 | Msa0187950:intron | 35.0% |
! | GTCTTTTTGTTGGATTGTCA+TGG | + | chr2_1:2846313-2846332 | Msa0187950:intron | 35.0% |
CAAGCTACCCTCTTAAATTA+CGG | - | chr2_1:2846369-2846388 | None:intergenic | 35.0% | |
! | GGTTTTCATGTGACAAATGA+TGG | + | chr2_1:2846416-2846435 | Msa0187950:intron | 35.0% |
! | TGATTAAAGCTGTCGGTTAT+TGG | - | chr2_1:2846507-2846526 | None:intergenic | 35.0% |
! | AATAACCGACAGCTTTAATC+AGG | + | chr2_1:2846506-2846525 | Msa0187950:intron | 35.0% |
CAAAACCTGATTAAAGCTGT+CGG | - | chr2_1:2846514-2846533 | None:intergenic | 35.0% | |
!! | ACAGCTTTAATCAGGTTTTG+TGG | + | chr2_1:2846514-2846533 | Msa0187950:intron | 35.0% |
GATCCTGAAGGAAAAAAGTT+TGG | + | chr2_1:2846566-2846585 | Msa0187950:CDS | 35.0% | |
! | TTGTTTATTTGCCCTTTTGG+CGG | + | chr2_1:2846778-2846797 | Msa0187950:intron | 35.0% |
AAGTTTCAAATCCGCCAAAA+GGG | - | chr2_1:2846792-2846811 | None:intergenic | 35.0% | |
AAAGTTTCAAATCCGCCAAA+AGG | - | chr2_1:2846793-2846812 | None:intergenic | 35.0% | |
TTTAAAAAGGGGTGATTGCA+CGG | - | chr2_1:2846908-2846927 | None:intergenic | 35.0% | |
!! | TTCTGTGTTTTTGAATCCTC+AGG | + | chr2_1:2847008-2847027 | Msa0187950:intron | 35.0% |
ACAGAAGTAAGAAAAGGAGA+TGG | + | chr2_1:2847164-2847183 | Msa0187950:CDS | 35.0% | |
TTGAGTATATCCAAGTCGAA+AGG | - | chr2_1:2847254-2847273 | None:intergenic | 35.0% | |
!! | TTTCGACTTGGATATACTCA+AGG | + | chr2_1:2847253-2847272 | Msa0187950:CDS | 35.0% |
!! | GTTTGATGATGTGTTCTTTG+TGG | + | chr2_1:2847409-2847428 | Msa0187950:intron | 35.0% |
! | CTTGTATTTTCCCTAATAGG+CGG | + | chr2_1:2847451-2847470 | Msa0187950:intron | 35.0% |
AAAGGAATACCAACAATTGC+AGG | + | chr2_1:2847476-2847495 | Msa0187950:CDS | 35.0% | |
CTCAAAGAAACACCATGAAA+AGG | + | chr2_1:2847673-2847692 | Msa0187950:CDS | 35.0% | |
GCTATAGCGTTATTGCATAA+TGG | + | chr2_1:2847865-2847884 | Msa0187950:intron | 35.0% | |
GCTATAGCGTTATTGCATAA+TGG | + | chr2_1:2847865-2847884 | Msa0187950:intron | 35.0% | |
ACATTGAACAGTGTTGTCAA+TGG | - | chr2_1:2848063-2848082 | None:intergenic | 35.0% | |
TGCTCAATATCTTTCAGAAG+AGG | + | chr2_1:2848152-2848171 | Msa0187950:intron | 35.0% | |
ATATACACCAGAAATGTGCT+GGG | - | chr2_1:2848287-2848306 | None:intergenic | 35.0% | |
AATATACACCAGAAATGTGC+TGG | - | chr2_1:2848288-2848307 | None:intergenic | 35.0% | |
AGCTCAAGAATTGATGAGTT+GGG | + | chr2_1:2848379-2848398 | Msa0187950:CDS | 35.0% | |
! | TTCACTCTCTTTTCCTCAAT+TGG | + | chr2_1:2848441-2848460 | Msa0187950:three_prime_UTR | 35.0% |
CAAATGACAACAACCAATTG+AGG | - | chr2_1:2848457-2848476 | None:intergenic | 35.0% | |
! | ACACTGTTAGCAATTTTTCC+TGG | + | chr2_1:2848683-2848702 | Msa0187950:intron | 35.0% |
CTACCAGTGTTCTCAAATAT+TGG | + | chr2_1:2848722-2848741 | Msa0187950:intron | 35.0% | |
TAGCCAATATTTGAGAACAC+TGG | - | chr2_1:2848728-2848747 | None:intergenic | 35.0% | |
GCTGCTAATAAATAGTGTGT+TGG | - | chr2_1:2848806-2848825 | None:intergenic | 35.0% | |
TTGACAATAGAGATCAGTGT+TGG | - | chr2_1:2848892-2848911 | None:intergenic | 35.0% | |
ATTGTAAGACAAATCTACCC+TGG | + | chr2_1:2848980-2848999 | Msa0187950:intron | 35.0% | |
!! | AAAAGAATGGATTGAGCATG+AGG | + | chr2_1:2849239-2849258 | Msa0187950:intron | 35.0% |
!! | AAAGAATGGATTGAGCATGA+GGG | + | chr2_1:2849240-2849259 | Msa0187950:intron | 35.0% |
!! | GTGTTTTGTCATTTGAGAGA+TGG | + | chr2_1:2849263-2849282 | Msa0187950:intron | 35.0% |
CAACCTGTTACGTAATCAAA+GGG | + | chr2_1:2849306-2849325 | Msa0187950:intron | 35.0% | |
ATTCCCTTTGATTACGTAAC+AGG | - | chr2_1:2849312-2849331 | None:intergenic | 35.0% | |
! | CAATGTCGGTTGATATCAAT+CGG | + | chr2_1:2849360-2849379 | Msa0187950:intron | 35.0% |
CTTCTTCGTTGACAATGATA+CGG | + | chr2_1:2849456-2849475 | Msa0187950:intron | 35.0% | |
TTCTTCGTTGACAATGATAC+GGG | + | chr2_1:2849457-2849476 | Msa0187950:intron | 35.0% | |
AAATATTGTGAGAGAAAGGG+AGG | + | chr2_1:2849537-2849556 | Msa0187950:intron | 35.0% | |
TTATCACTTACAGAAGAGTC+GGG | - | chr2_1:2849661-2849680 | None:intergenic | 35.0% | |
CTTATCACTTACAGAAGAGT+CGG | - | chr2_1:2849662-2849681 | None:intergenic | 35.0% | |
GACAGACTGAACATTAACAA+GGG | - | chr2_1:2849740-2849759 | None:intergenic | 35.0% | |
AGACAGACTGAACATTAACA+AGG | - | chr2_1:2849741-2849760 | None:intergenic | 35.0% | |
! | TGTTGTACTGAGGAACATTT+TGG | + | chr2_1:2849851-2849870 | Msa0187950:intron | 35.0% |
TAAAACAATGCATCTTGCCT+CGG | + | chr2_1:2849878-2849897 | Msa0187950:intron | 35.0% | |
! | CAATTTTTCTCTCTTGCTTC+CGG | + | chr2_1:2850215-2850234 | Msa0187950:intron | 35.0% |
! | AATTTTTCTCTCTTGCTTCC+GGG | + | chr2_1:2850216-2850235 | Msa0187950:intron | 35.0% |
AGAATGCACAAACTGAAACA+TGG | - | chr2_1:2850549-2850568 | None:intergenic | 35.0% | |
! | TTGTAACTTGGACTTTTCAG+AGG | + | chr2_1:2850593-2850612 | Msa0187950:intron | 35.0% |
GCCTTATCACAGCATAATAA+TGG | - | chr2_1:2850671-2850690 | None:intergenic | 35.0% | |
TTCAAAGCAGTGTGATAAAG+TGG | + | chr2_1:2850904-2850923 | Msa0187950:intron | 35.0% | |
!!! | TTTTTTGTTGCAGAGTAGCT+AGG | + | chr2_1:2851017-2851036 | Msa0187950:intron | 35.0% |
! | TTTTTGTTGCAGAGTAGCTA+GGG | + | chr2_1:2851018-2851037 | Msa0187950:intron | 35.0% |
CATCCGCGATGTTAAATAAA+TGG | - | chr2_1:2851383-2851402 | None:intergenic | 35.0% | |
CATTTATTTAACATCGCGGA+TGG | + | chr2_1:2851381-2851400 | Msa0187950:three_prime_UTR | 35.0% | |
CTTTGTTGAGGTTTCAGTGT+TGG | - | chr2_1:2844823-2844842 | None:intergenic | 40.0% | |
! | GTTTGGATCTGCAATTTTGC+AGG | + | chr2_1:2844900-2844919 | Msa0187950:five_prime_UTR | 40.0% |
! | CGAAGAAATTTTTGTTGGGG+TGG | + | chr2_1:2845073-2845092 | Msa0187950:five_prime_UTR | 40.0% |
! | GGTTGAAGTTTTGCAATTGC+TGG | + | chr2_1:2845094-2845113 | Msa0187950:five_prime_UTR | 40.0% |
! | TGAAGTTTTGCAATTGCTGG+AGG | + | chr2_1:2845097-2845116 | Msa0187950:five_prime_UTR | 40.0% |
! | AGGATTTTTCACTCTTCAGG+TGG | + | chr2_1:2845170-2845189 | Msa0187950:intron | 40.0% |
! | GGATTTTTCACTCTTCAGGT+GGG | + | chr2_1:2845171-2845190 | Msa0187950:intron | 40.0% |
! | GATTTTTCACTCTTCAGGTG+GGG | + | chr2_1:2845172-2845191 | Msa0187950:intron | 40.0% |
AGGGATGACATGAACTTGAT+TGG | - | chr2_1:2845533-2845552 | None:intergenic | 40.0% | |
!! | GAGAAGCATTCAGTTTCACA+TGG | - | chr2_1:2845624-2845643 | None:intergenic | 40.0% |
! | ACGCTTTCGATCAAAAGTGT+TGG | - | chr2_1:2845831-2845850 | None:intergenic | 40.0% |
!! | CAGATTATTAGCTTTGGGCA+TGG | + | chr2_1:2846088-2846107 | Msa0187950:intron | 40.0% |
!! | GAACACTTGTTTTTCCCAGT+TGG | + | chr2_1:2846138-2846157 | Msa0187950:intron | 40.0% |
!! | TTGTTTTTCCCAGTTGGTCT+TGG | + | chr2_1:2846144-2846163 | Msa0187950:intron | 40.0% |
! | TGGTGTTTTGCTTGAATGCT+AGG | + | chr2_1:2846168-2846187 | Msa0187950:intron | 40.0% |
! | GGTGTTTTGCTTGAATGCTA+GGG | + | chr2_1:2846169-2846188 | Msa0187950:intron | 40.0% |
GATTGAATCATGGATCCTGA+AGG | + | chr2_1:2846554-2846573 | Msa0187950:exon | 40.0% | |
!!! | CCTCCAAACTTTTTTCCTTC+AGG | - | chr2_1:2846572-2846591 | None:intergenic | 40.0% |
CCTGAAGGAAAAAAGTTTGG+AGG | + | chr2_1:2846569-2846588 | Msa0187950:CDS | 40.0% | |
GAAGGAAAAAAGTTTGGAGG+AGG | + | chr2_1:2846572-2846591 | Msa0187950:CDS | 40.0% | |
GGAGACACAGAAGTAAGAAA+AGG | + | chr2_1:2847158-2847177 | Msa0187950:CDS | 40.0% | |
AAAAGGAGATGGCATGCAAT+TGG | + | chr2_1:2847175-2847194 | Msa0187950:CDS | 40.0% | |
GCTACACAATTTCTTACAGC+AGG | - | chr2_1:2847317-2847336 | None:intergenic | 40.0% | |
CGCCTATTAGGGAAAATACA+AGG | - | chr2_1:2847453-2847472 | None:intergenic | 40.0% | |
ATTCCTTTCTCCGCCTATTA+GGG | - | chr2_1:2847464-2847483 | None:intergenic | 40.0% | |
TATTCCTTTCTCCGCCTATT+AGG | - | chr2_1:2847465-2847484 | None:intergenic | 40.0% | |
! | AGCATAAGAAGCACAAAGAC+AGG | + | chr2_1:2847531-2847550 | Msa0187950:CDS | 40.0% |
! | GCATAAGAAGCACAAAGACA+GGG | + | chr2_1:2847532-2847551 | Msa0187950:CDS | 40.0% |
CAGAAGCAAAGACAAAGACA+AGG | + | chr2_1:2847604-2847623 | Msa0187950:CDS | 40.0% | |
TTTCTTTGAGTGATCAGCAC+TGG | - | chr2_1:2847663-2847682 | None:intergenic | 40.0% | |
! | TCTGTGCTAAATAGGTATCG+CGG | - | chr2_1:2847958-2847977 | None:intergenic | 40.0% |
TCTATAGCACAATTGCGTAG+TGG | + | chr2_1:2848005-2848024 | Msa0187950:intron | 40.0% | |
TTGAACAGTGTTGTCAATGG+CGG | - | chr2_1:2848060-2848079 | None:intergenic | 40.0% | |
! | TTTCAGAAGAGGAAGCATGA+CGG | + | chr2_1:2848163-2848182 | Msa0187950:intron | 40.0% |
GAGCTCAAGAATTGATGAGT+TGG | + | chr2_1:2848378-2848397 | Msa0187950:CDS | 40.0% | |
GCTCAAGAATTGATGAGTTG+GGG | + | chr2_1:2848380-2848399 | Msa0187950:CDS | 40.0% | |
! | CTCAAGAATTGATGAGTTGG+GGG | + | chr2_1:2848381-2848400 | Msa0187950:CDS | 40.0% |
GCTGTAGCACTATAGCTAAA+CGG | + | chr2_1:2848755-2848774 | Msa0187950:intron | 40.0% | |
GCTATATCACTGTAGTGTAG+CGG | + | chr2_1:2848835-2848854 | Msa0187950:intron | 40.0% | |
AAAAACTGAATCTGCAACCC+TGG | - | chr2_1:2849023-2849042 | None:intergenic | 40.0% | |
GAAGCACATTACTACACTGA+TGG | - | chr2_1:2849117-2849136 | None:intergenic | 40.0% | |
AGGAGAAAAATGAGAGGGTT+GGG | - | chr2_1:2849139-2849158 | None:intergenic | 40.0% | |
AAGGAGAAAAATGAGAGGGT+TGG | - | chr2_1:2849140-2849159 | None:intergenic | 40.0% | |
!! | AACCCTCTCATTTTTCTCCT+TGG | + | chr2_1:2849139-2849158 | Msa0187950:intron | 40.0% |
CACCAAGGAGAAAAATGAGA+GGG | - | chr2_1:2849144-2849163 | None:intergenic | 40.0% | |
!! | CTCTCATTTTTCTCCTTGGT+GGG | + | chr2_1:2849143-2849162 | Msa0187950:intron | 40.0% |
! | GTTAATTAGCGGGTGAGTTA+GGG | + | chr2_1:2849179-2849198 | Msa0187950:intron | 40.0% |
GGAGACAGTTAGGAGAAATA+AGG | + | chr2_1:2849200-2849219 | Msa0187950:intron | 40.0% | |
!! | AAGAATGGATTGAGCATGAG+GGG | + | chr2_1:2849241-2849260 | Msa0187950:intron | 40.0% |
AACAGGTTGCAGAACTTTGA+GGG | - | chr2_1:2849295-2849314 | None:intergenic | 40.0% | |
TAACAGGTTGCAGAACTTTG+AGG | - | chr2_1:2849296-2849315 | None:intergenic | 40.0% | |
GCAACCTGTTACGTAATCAA+AGG | + | chr2_1:2849305-2849324 | Msa0187950:intron | 40.0% | |
GTGAATCTGTGATGCAATGT+CGG | + | chr2_1:2849346-2849365 | Msa0187950:intron | 40.0% | |
ACATGTGAATGCAATGGTTG+TGG | + | chr2_1:2849427-2849446 | Msa0187950:intron | 40.0% | |
! | CATTGTCAACGAAGAAGCAT+CGG | - | chr2_1:2849453-2849472 | None:intergenic | 40.0% |
GGTTCAATCTGTTGACCTAA+TGG | + | chr2_1:2849597-2849616 | Msa0187950:intron | 40.0% | |
TTTCTTCAGTAACTCAAGGC+AGG | - | chr2_1:2849624-2849643 | None:intergenic | 40.0% | |
! | TTTTTGTAGCTCAAACCTGC+TGG | - | chr2_1:2849695-2849714 | None:intergenic | 40.0% |
! | GAACATTAACAAGGGCACAT+GGG | - | chr2_1:2849732-2849751 | None:intergenic | 40.0% |
! | TGAACATTAACAAGGGCACA+TGG | - | chr2_1:2849733-2849752 | None:intergenic | 40.0% |
GAGGTTTGGATTGATTGCAT+GGG | - | chr2_1:2849789-2849808 | None:intergenic | 40.0% | |
!!! | GGCAAGATGCATTGTTTTAG+TGG | - | chr2_1:2849877-2849896 | None:intergenic | 40.0% |
TTGCCTCGGCTATATATAAG+AGG | + | chr2_1:2849892-2849911 | Msa0187950:intron | 40.0% | |
TGCCTCGGCTATATATAAGA+GGG | + | chr2_1:2849893-2849912 | Msa0187950:intron | 40.0% | |
ATCCCTCTTATATATAGCCG+AGG | - | chr2_1:2849898-2849917 | None:intergenic | 40.0% | |
GGCTCGTATGAGTGTTATAT+AGG | - | chr2_1:2850165-2850184 | None:intergenic | 40.0% | |
!! | TATTTCACTCTGGGATTCAC+TGG | + | chr2_1:2850829-2850848 | Msa0187950:intron | 40.0% |
!! | ATTTCACTCTGGGATTCACT+GGG | + | chr2_1:2850830-2850849 | Msa0187950:intron | 40.0% |
! | TTTTGTTGCAGAGTAGCTAG+GGG | + | chr2_1:2851019-2851038 | Msa0187950:intron | 40.0% |
! | ATGATGGTGAATTCACCTGA+TGG | + | chr2_1:2851061-2851080 | Msa0187950:three_prime_UTR | 40.0% |
!! | AATTCACCTGATGGTGGAAA+AGG | + | chr2_1:2851070-2851089 | Msa0187950:three_prime_UTR | 40.0% |
! | GTCTTCCTTTTCCCAGTTTT+TGG | + | chr2_1:2851169-2851188 | Msa0187950:intron | 40.0% |
TATCCAGTGCTCCAAAAACT+GGG | - | chr2_1:2851183-2851202 | None:intergenic | 40.0% | |
ATATCCAGTGCTCCAAAAAC+TGG | - | chr2_1:2851184-2851203 | None:intergenic | 40.0% | |
TCACGCCCTAATATTACTGA+CGG | + | chr2_1:2851447-2851466 | Msa0187950:three_prime_UTR | 40.0% | |
ACAATCACGAGTACTACCGA+AGG | + | chr2_1:2844778-2844797 | Msa0187950:five_prime_UTR | 45.0% | |
!!! | AGGTGATTTGGTGGGTTTTG+TGG | + | chr2_1:2845141-2845160 | Msa0187950:five_prime_UTR | 45.0% |
!!! | GGTGATTTGGTGGGTTTTGT+GGG | + | chr2_1:2845142-2845161 | Msa0187950:five_prime_UTR | 45.0% |
!!! | TTGTGCTGTTTTTTCCCCCT+TGG | + | chr2_1:2845479-2845498 | Msa0187950:intron | 45.0% |
AAGAAAAGGGGTGGAACCAA+GGG | - | chr2_1:2845498-2845517 | None:intergenic | 45.0% | |
AAAGAAAAGGGGTGGAACCA+AGG | - | chr2_1:2845499-2845518 | None:intergenic | 45.0% | |
! | GTAATCACATGTGTCGGTGT+GGG | - | chr2_1:2845876-2845895 | None:intergenic | 45.0% |
! | TGTAATCACATGTGTCGGTG+TGG | - | chr2_1:2845877-2845896 | None:intergenic | 45.0% |
TCTGGTGTGCGTGTTTGTTT+CGG | + | chr2_1:2845950-2845969 | Msa0187950:intron | 45.0% | |
!!! | TTTTCCCAGTTGGTCTTGGA+TGG | + | chr2_1:2846148-2846167 | Msa0187950:intron | 45.0% |
AACACCATCCAAGACCAACT+GGG | - | chr2_1:2846155-2846174 | None:intergenic | 45.0% | |
AAACACCATCCAAGACCAAC+TGG | - | chr2_1:2846156-2846175 | None:intergenic | 45.0% | |
TAGCTGTACAATAGGGGTTG+CGG | + | chr2_1:2846227-2846246 | Msa0187950:intron | 45.0% | |
! | TTTTTGAATCCTCAGGACCG+AGG | + | chr2_1:2847015-2847034 | Msa0187950:intron | 45.0% |
! | TTTTGAATCCTCAGGACCGA+GGG | + | chr2_1:2847016-2847035 | Msa0187950:intron | 45.0% |
TCTCAAGAGAGACAAGTGCT+CGG | + | chr2_1:2847222-2847241 | Msa0187950:CDS | 45.0% | |
! | CGACTTGGATATACTCAAGG+AGG | + | chr2_1:2847256-2847275 | Msa0187950:CDS | 45.0% |
TCAAGGAGGCTTTCCAACTA+AGG | + | chr2_1:2847270-2847289 | Msa0187950:CDS | 45.0% | |
CAAGGAGGCTTTCCAACTAA+GGG | + | chr2_1:2847271-2847290 | Msa0187950:CDS | 45.0% | |
CTTACAGCAGGCAAATCGAT+GGG | - | chr2_1:2847305-2847324 | None:intergenic | 45.0% | |
TCTTACAGCAGGCAAATCGA+TGG | - | chr2_1:2847306-2847325 | None:intergenic | 45.0% | |
TTTCCCTAATAGGCGGAGAA+AGG | + | chr2_1:2847458-2847477 | Msa0187950:intron | 45.0% | |
GAAGCACAAAGACAGGGATA+AGG | + | chr2_1:2847538-2847557 | Msa0187950:CDS | 45.0% | |
CAAAGACAGGGATAAGGACA+AGG | + | chr2_1:2847544-2847563 | Msa0187950:CDS | 45.0% | |
GAAGCACAAACATCGTCACA+AGG | + | chr2_1:2847580-2847599 | Msa0187950:CDS | 45.0% | |
ATGCAATAACGCTATAGCGC+CGG | - | chr2_1:2847907-2847926 | None:intergenic | 45.0% | |
TTTCTGTCCCAGCACATTTC+TGG | + | chr2_1:2848277-2848296 | Msa0187950:intron | 45.0% | |
! | TGATGAGTTGGGGGCAATAA+AGG | + | chr2_1:2848390-2848409 | Msa0187950:CDS | 45.0% |
!! | GAGATCAGTGTTGGCAATTG+TGG | - | chr2_1:2848883-2848902 | None:intergenic | 45.0% |
! | CAAATGTACTTGTTGGGGAG+TGG | + | chr2_1:2848915-2848934 | Msa0187950:intron | 45.0% |
CTATTGAACAACAGCAGCCA+GGG | - | chr2_1:2849000-2849019 | None:intergenic | 45.0% | |
CTGCTGTTGTTCAATAGCCA+GGG | + | chr2_1:2849003-2849022 | Msa0187950:intron | 45.0% | |
CCACCAAGGAGAAAAATGAG+AGG | - | chr2_1:2849145-2849164 | None:intergenic | 45.0% | |
!! | CCTCTCATTTTTCTCCTTGG+TGG | + | chr2_1:2849142-2849161 | Msa0187950:intron | 45.0% |
ACCCCTAGGTGGTTAATTAG+CGG | + | chr2_1:2849168-2849187 | Msa0187950:intron | 45.0% | |
ACCCGCTAATTAACCACCTA+GGG | - | chr2_1:2849173-2849192 | None:intergenic | 45.0% | |
! | GGTTAATTAGCGGGTGAGTT+AGG | + | chr2_1:2849178-2849197 | Msa0187950:intron | 45.0% |
! | ATCAGAGCTCTGATCTTGGA+GGG | + | chr2_1:2849384-2849403 | Msa0187950:intron | 45.0% |
TGACAATGATACGGGTAGAG+AGG | + | chr2_1:2849465-2849484 | Msa0187950:intron | 45.0% | |
TCCAGCAACTACAGTACCTT+GGG | + | chr2_1:2849495-2849514 | Msa0187950:intron | 45.0% | |
GTGGAACTTATGTCATCCCA+AGG | - | chr2_1:2849514-2849533 | None:intergenic | 45.0% | |
TATTGTGAGAGAAAGGGAGG+AGG | + | chr2_1:2849540-2849559 | Msa0187950:intron | 45.0% | |
ATTGTGAGAGAAAGGGAGGA+GGG | + | chr2_1:2849541-2849560 | Msa0187950:intron | 45.0% | |
TAACTCAAGGCAGGTCCATT+AGG | - | chr2_1:2849615-2849634 | None:intergenic | 45.0% | |
ATAAGCCAAGTAAGTCCAGC+AGG | + | chr2_1:2849677-2849696 | Msa0187950:intron | 45.0% | |
TCAAACCTGCTGGACTTACT+TGG | - | chr2_1:2849685-2849704 | None:intergenic | 45.0% | |
! | TGGATTGATTGCATGGGTTG+TGG | - | chr2_1:2849783-2849802 | None:intergenic | 45.0% |
GGAGGTTTGGATTGATTGCA+TGG | - | chr2_1:2849790-2849809 | None:intergenic | 45.0% | |
ACTAATACACCAGAGTCAGG+AGG | - | chr2_1:2849814-2849833 | None:intergenic | 45.0% | |
TCCTGACTCTGGTGTATTAG+TGG | + | chr2_1:2849813-2849832 | Msa0187950:intron | 45.0% | |
CTGTCCTCATCTATGAAGCA+CGG | + | chr2_1:2850012-2850031 | Msa0187950:intron | 45.0% | |
TACTTCGACACTCCTACGAT+CGG | + | chr2_1:2850130-2850149 | Msa0187950:intron | 45.0% | |
TTTGTGTGAGTTGTCCGACA+CGG | - | chr2_1:2850186-2850205 | None:intergenic | 45.0% | |
AGATGAGGACCTATGAAGCA+TGG | - | chr2_1:2850503-2850522 | None:intergenic | 45.0% | |
!! | CTTTTCAGAGGTGCACAATC+CGG | + | chr2_1:2850605-2850624 | Msa0187950:intron | 45.0% |
CTTATCCCACTAAGTGAGGT+CGG | - | chr2_1:2850731-2850750 | None:intergenic | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+AGG | - | chr2_1:2850735-2850754 | None:intergenic | 45.0% |
TCACTTAGTGGGATAAGGCT+TGG | + | chr2_1:2850734-2850753 | Msa0187950:intron | 45.0% | |
ATGGTGAATTCACCTGATGG+TGG | + | chr2_1:2851064-2851083 | Msa0187950:three_prime_UTR | 45.0% | |
GTGCTCCAAAAACTGGGAAA+AGG | - | chr2_1:2851177-2851196 | None:intergenic | 45.0% | |
!!! | TTTCCCAGTTTTTGGAGCAC+TGG | + | chr2_1:2851177-2851196 | Msa0187950:intron | 45.0% |
ATCGCGGATGGATCTGTATA+TGG | + | chr2_1:2851393-2851412 | Msa0187950:three_prime_UTR | 45.0% | |
!! | TGAAATAATTATAATAATTT+GGG | - | chr2_1:2850816-2850835 | None:intergenic | 5.0% |
!! | AAAAAAAAAAAAAAAACAAT+TGG | - | chr2_1:2851002-2851021 | None:intergenic | 5.0% |
!! | GGTGGGTTTTGTGGGAATTG+AGG | + | chr2_1:2845150-2845169 | Msa0187950:five_prime_UTR | 50.0% |
AGAAAAGGGGTGGAACCAAG+GGG | - | chr2_1:2845497-2845516 | None:intergenic | 50.0% | |
! | GATCGAAAGCGTGTCTGACA+CGG | + | chr2_1:2845839-2845858 | Msa0187950:intron | 50.0% |
! | ATCGAAAGCGTGTCTGACAC+GGG | + | chr2_1:2845840-2845859 | Msa0187950:intron | 50.0% |
! | TGATGTGTCACTGCTGTGTC+TGG | + | chr2_1:2845932-2845951 | Msa0187950:intron | 50.0% |
AGCTGTACAATAGGGGTTGC+GGG | + | chr2_1:2846228-2846247 | Msa0187950:intron | 50.0% | |
ACAATAGGGGTTGCGGGAAT+AGG | + | chr2_1:2846234-2846253 | Msa0187950:intron | 50.0% | |
CACTACCTGCACAGTGTAGT+AGG | + | chr2_1:2847137-2847156 | Msa0187950:CDS | 50.0% | |
TGTCTCCTACTACACTGTGC+AGG | - | chr2_1:2847145-2847164 | None:intergenic | 50.0% | |
TCGGATACAGCCTTTCGACT+TGG | + | chr2_1:2847241-2847260 | Msa0187950:CDS | 50.0% | |
! | TGGGAGCTGTTTCCCTTAGT+TGG | - | chr2_1:2847286-2847305 | None:intergenic | 50.0% |
ACAGGGATAAGGACAAGGAC+AGG | + | chr2_1:2847549-2847568 | Msa0187950:CDS | 50.0% | |
CAGGGATAAGGACAAGGACA+GGG | + | chr2_1:2847550-2847569 | Msa0187950:CDS | 50.0% | |
TTGGGGGCAATAAAGGTTGC+TGG | + | chr2_1:2848397-2848416 | Msa0187950:CDS | 50.0% | |
! | ATGTACTTGTTGGGGAGTGG+AGG | + | chr2_1:2848918-2848937 | Msa0187950:intron | 50.0% |
GCTATTGAACAACAGCAGCC+AGG | - | chr2_1:2849001-2849020 | None:intergenic | 50.0% | |
GCTGCTGTTGTTCAATAGCC+AGG | + | chr2_1:2849002-2849021 | Msa0187950:intron | 50.0% | |
CCCGCTAATTAACCACCTAG+GGG | - | chr2_1:2849172-2849191 | None:intergenic | 50.0% | |
CCCCTAGGTGGTTAATTAGC+GGG | + | chr2_1:2849169-2849188 | Msa0187950:intron | 50.0% | |
CACCCGCTAATTAACCACCT+AGG | - | chr2_1:2849174-2849193 | None:intergenic | 50.0% | |
GGTGAGTTAGGGAGACAGTT+AGG | + | chr2_1:2849190-2849209 | Msa0187950:intron | 50.0% | |
! | CATCAGAGCTCTGATCTTGG+AGG | + | chr2_1:2849383-2849402 | Msa0187950:intron | 50.0% |
GTCCAGCAACTACAGTACCT+TGG | + | chr2_1:2849494-2849513 | Msa0187950:intron | 50.0% | |
!! | TCCCAAGGTACTGTAGTTGC+TGG | - | chr2_1:2849499-2849518 | None:intergenic | 50.0% |
! | ACAAGGGCACATGGGTATCA+TGG | - | chr2_1:2849724-2849743 | None:intergenic | 50.0% |
CTGTCTGTCACCTCTAAACC+AGG | + | chr2_1:2849755-2849774 | Msa0187950:intron | 50.0% | |
AATACACCAGAGTCAGGAGG+TGG | - | chr2_1:2849811-2849830 | None:intergenic | 50.0% | |
GCCACTAATACACCAGAGTC+AGG | - | chr2_1:2849817-2849836 | None:intergenic | 50.0% | |
GTGTCCGTGCTTCATAGATG+AGG | - | chr2_1:2850019-2850038 | None:intergenic | 50.0% | |
TATGAAGCACGGACACCTCT+AGG | + | chr2_1:2850023-2850042 | Msa0187950:intron | 50.0% | |
! | TACGGGTGTCATAGGAGTGT+CGG | - | chr2_1:2850068-2850087 | None:intergenic | 50.0% |
AACACTCATACGAGCCGTGT+CGG | + | chr2_1:2850169-2850188 | Msa0187950:intron | 50.0% | |
TGTCGGAGTCCATGCTTCAT+AGG | + | chr2_1:2850491-2850510 | Msa0187950:intron | 50.0% | |
ACTAAGTGAGGTCGGCTACA+TGG | - | chr2_1:2850723-2850742 | None:intergenic | 50.0% | |
ATGTAGCCGACCTCACTTAG+TGG | + | chr2_1:2850722-2850741 | Msa0187950:intron | 50.0% | |
TGTAGCCGACCTCACTTAGT+GGG | + | chr2_1:2850723-2850742 | Msa0187950:intron | 50.0% | |
CGACCTCACTTAGTGGGATA+AGG | + | chr2_1:2850729-2850748 | Msa0187950:intron | 50.0% | |
! | GTGGGATAAGGCTTGGTTGT+TGG | + | chr2_1:2850741-2850760 | Msa0187950:intron | 50.0% |
! | CTGCTTCCTTTTCCACCATC+AGG | - | chr2_1:2851079-2851098 | None:intergenic | 50.0% |
!! | CTGATGGTGGAAAAGGAAGC+AGG | + | chr2_1:2851077-2851096 | Msa0187950:three_prime_UTR | 50.0% |
GAAAAGGGGTGGAACCAAGG+GGG | - | chr2_1:2845496-2845515 | None:intergenic | 55.0% | |
CAGCAGTGACACATCAGCAC+CGG | - | chr2_1:2845928-2845947 | None:intergenic | 55.0% | |
ACAGCACCTGTCAACTCCCT+CGG | - | chr2_1:2847035-2847054 | None:intergenic | 55.0% | |
TCCGCGATTGACACAGGAAG+CGG | - | chr2_1:2847113-2847132 | None:intergenic | 55.0% | |
TGTGTGTCCGCGATTGACAC+AGG | - | chr2_1:2847119-2847138 | None:intergenic | 55.0% | |
TTGTTGGGGAGTGGAGGAAG+AGG | + | chr2_1:2848924-2848943 | Msa0187950:intron | 55.0% | |
TGTTGGGGAGTGGAGGAAGA+GGG | + | chr2_1:2848925-2848944 | Msa0187950:intron | 55.0% | |
! | CGGCATCAGAGCTCTGATCT+TGG | + | chr2_1:2849380-2849399 | Msa0187950:intron | 55.0% |
! | GAGCTCTGATCTTGGAGGGT+AGG | + | chr2_1:2849388-2849407 | Msa0187950:intron | 55.0% |
TGAGAGAAAGGGAGGAGGGA+AGG | + | chr2_1:2849545-2849564 | Msa0187950:intron | 55.0% | |
GAGAGAAAGGGAGGAGGGAA+GGG | + | chr2_1:2849546-2849565 | Msa0187950:intron | 55.0% | |
GGTTGTGGCTCCTGGTTTAG+AGG | - | chr2_1:2849768-2849787 | None:intergenic | 55.0% | |
! | ATTGCATGGGTTGTGGCTCC+TGG | - | chr2_1:2849776-2849795 | None:intergenic | 55.0% |
AGAGTCAGGAGGTGGAGGTT+TGG | - | chr2_1:2849803-2849822 | None:intergenic | 55.0% | |
AAACCTCCACCTCCTGACTC+TGG | + | chr2_1:2849802-2849821 | Msa0187950:intron | 55.0% | |
! | ACGTGTCGTACGGGTGTCAT+AGG | - | chr2_1:2850076-2850095 | None:intergenic | 55.0% |
GTTCGTGTCAGTGTCGTGTC+AGG | + | chr2_1:2850462-2850481 | Msa0187950:intron | 55.0% | |
GTCGTGTCAGGTGTCTGTGT+CGG | + | chr2_1:2850474-2850493 | Msa0187950:intron | 55.0% | |
GGGAAACGAGTGATACGAGC+CGG | - | chr2_1:2850793-2850812 | None:intergenic | 55.0% | |
TGTCAACTCCCTCGGTCCTG+AGG | - | chr2_1:2847027-2847046 | None:intergenic | 60.0% | |
TCAGGACCGAGGGAGTTGAC+AGG | + | chr2_1:2847026-2847045 | Msa0187950:intron | 60.0% | |
! | GAGGGAGTTGACAGGTGCTG+TGG | + | chr2_1:2847034-2847053 | Msa0187950:CDS | 60.0% |
GCCGCTTCCTGTGTCAATCG+CGG | + | chr2_1:2847109-2847128 | Msa0187950:CDS | 60.0% | |
!! | CTCCTTGGTGGGTTACCCCT+AGG | + | chr2_1:2849154-2849173 | Msa0187950:intron | 60.0% |
CACCTAGGGGTAACCCACCA+AGG | - | chr2_1:2849159-2849178 | None:intergenic | 60.0% | |
!! | CTTGGTGGGTTACCCCTAGG+TGG | + | chr2_1:2849157-2849176 | Msa0187950:intron | 60.0% |
GAAAGGGAGGAGGGAAGGGT+AGG | + | chr2_1:2849550-2849569 | Msa0187950:intron | 60.0% | |
GGAGGAGGGAAGGGTAGGAA+TGG | + | chr2_1:2849555-2849574 | Msa0187950:intron | 60.0% | |
ACACCAGAGTCAGGAGGTGG+AGG | - | chr2_1:2849808-2849827 | None:intergenic | 60.0% | |
!! | GCACGGACACCTCTAGGACT+AGG | + | chr2_1:2850029-2850048 | Msa0187950:intron | 60.0% |
!! | CTCTAGGACTAGGCGTGTCG+CGG | + | chr2_1:2850039-2850058 | Msa0187950:intron | 60.0% |
CGGTTCGACACGTGTCGTAC+GGG | - | chr2_1:2850085-2850104 | None:intergenic | 60.0% | |
! | CCGGTTCGACACGTGTCGTA+CGG | - | chr2_1:2850086-2850105 | None:intergenic | 60.0% |
CCGTACGACACGTGTCGAAC+CGG | + | chr2_1:2850083-2850102 | Msa0187950:intron | 60.0% | |
!! | AGGTGTCGGACACCGATCGT+AGG | - | chr2_1:2850145-2850164 | None:intergenic | 60.0% |
CGCGACACGCCTAGTCCTAG+AGG | - | chr2_1:2850041-2850060 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 2844711 | 2851470 | 2844711 | ID=Msa0187950;Name=Msa0187950 |
chr2_1 | mRNA | 2844711 | 2851470 | 2844711 | ID=Msa0187950-mRNA-1;Parent=Msa0187950;Name=Msa0187950-mRNA-1;_AED=0.10;_eAED=0.10;_QI=376|1|1|1|0.5|0.44|9|451|218 |
chr2_1 | exon | 2844711 | 2844921 | 2844711 | ID=Msa0187950-mRNA-1:exon:1276;Parent=Msa0187950-mRNA-1 |
chr2_1 | exon | 2845069 | 2845188 | 2845069 | ID=Msa0187950-mRNA-1:exon:1277;Parent=Msa0187950-mRNA-1 |
chr2_1 | exon | 2846518 | 2846593 | 2846518 | ID=Msa0187950-mRNA-1:exon:1278;Parent=Msa0187950-mRNA-1 |
chr2_1 | exon | 2847030 | 2847319 | 2847030 | ID=Msa0187950-mRNA-1:exon:1279;Parent=Msa0187950-mRNA-1 |
chr2_1 | exon | 2847470 | 2847694 | 2847470 | ID=Msa0187950-mRNA-1:exon:1280;Parent=Msa0187950-mRNA-1 |
chr2_1 | exon | 2848169 | 2848228 | 2848169 | ID=Msa0187950-mRNA-1:exon:1281;Parent=Msa0187950-mRNA-1 |
chr2_1 | exon | 2848373 | 2848519 | 2848373 | ID=Msa0187950-mRNA-1:exon:1282;Parent=Msa0187950-mRNA-1 |
chr2_1 | exon | 2851030 | 2851098 | 2851030 | ID=Msa0187950-mRNA-1:exon:1283;Parent=Msa0187950-mRNA-1 |
chr2_1 | exon | 2851185 | 2851470 | 2851185 | ID=Msa0187950-mRNA-1:exon:1284;Parent=Msa0187950-mRNA-1 |
chr2_1 | five_prime_UTR | 2844711 | 2844921 | 2844711 | ID=Msa0187950-mRNA-1:five_prime_utr;Parent=Msa0187950-mRNA-1 |
chr2_1 | five_prime_UTR | 2845069 | 2845188 | 2845069 | ID=Msa0187950-mRNA-1:five_prime_utr;Parent=Msa0187950-mRNA-1 |
chr2_1 | five_prime_UTR | 2846518 | 2846562 | 2846518 | ID=Msa0187950-mRNA-1:five_prime_utr;Parent=Msa0187950-mRNA-1 |
chr2_1 | CDS | 2846563 | 2846593 | 2846563 | ID=Msa0187950-mRNA-1:cds;Parent=Msa0187950-mRNA-1 |
chr2_1 | CDS | 2847030 | 2847319 | 2847030 | ID=Msa0187950-mRNA-1:cds;Parent=Msa0187950-mRNA-1 |
chr2_1 | CDS | 2847470 | 2847694 | 2847470 | ID=Msa0187950-mRNA-1:cds;Parent=Msa0187950-mRNA-1 |
chr2_1 | CDS | 2848169 | 2848228 | 2848169 | ID=Msa0187950-mRNA-1:cds;Parent=Msa0187950-mRNA-1 |
chr2_1 | CDS | 2848373 | 2848423 | 2848373 | ID=Msa0187950-mRNA-1:cds;Parent=Msa0187950-mRNA-1 |
chr2_1 | three_prime_UTR | 2848424 | 2848519 | 2848424 | ID=Msa0187950-mRNA-1:three_prime_utr;Parent=Msa0187950-mRNA-1 |
chr2_1 | three_prime_UTR | 2851030 | 2851098 | 2851030 | ID=Msa0187950-mRNA-1:three_prime_utr;Parent=Msa0187950-mRNA-1 |
chr2_1 | three_prime_UTR | 2851185 | 2851470 | 2851185 | ID=Msa0187950-mRNA-1:three_prime_utr;Parent=Msa0187950-mRNA-1 |
Gene Sequence |
Protein sequence |