Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788540 | sp|Q680K8|Y1576_ARATH | 56.402 | 328 | 141 | 2 | 1 | 327 | 1 | 327 | 5.42e-135 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788540 | G7K4T7 | 93.333 | 330 | 20 | 1 | 1 | 328 | 1 | 330 | 0.0 | 637 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0788540 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004840 | Msa0788540 | 0.813603 | 2.354500e-51 | -8.615850e-47 |
| Msa0007440 | Msa0788540 | 0.801475 | 8.849992e-49 | -8.615850e-47 |
| Msa0010490 | Msa0788540 | 0.813709 | 2.230758e-51 | -8.615850e-47 |
| Msa0012710 | Msa0788540 | 0.811256 | 7.668597e-51 | -8.615850e-47 |
| Msa0015090 | Msa0788540 | 0.856169 | 3.857197e-62 | -8.615850e-47 |
| Msa0017320 | Msa0788540 | 0.814240 | 1.704352e-51 | -8.615850e-47 |
| Msa0020410 | Msa0788540 | 0.818719 | 1.692370e-52 | -8.615850e-47 |
| Msa0037880 | Msa0788540 | 0.804482 | 2.114993e-49 | -8.615850e-47 |
| Msa0043980 | Msa0788540 | 0.801563 | 8.486676e-49 | -8.615850e-47 |
| Msa0049750 | Msa0788540 | 0.844041 | 9.660810e-59 | -8.615850e-47 |
| Msa0051210 | Msa0788540 | 0.822036 | 2.936627e-53 | -8.615850e-47 |
| Msa0051450 | Msa0788540 | 0.833862 | 4.180008e-56 | -8.615850e-47 |
| Msa0053010 | Msa0788540 | 0.805591 | 1.239746e-49 | -8.615850e-47 |
| Msa0061500 | Msa0788540 | 0.805165 | 1.523031e-49 | -8.615850e-47 |
| Msa0065650 | Msa0788540 | 0.842131 | 3.117644e-58 | -8.615850e-47 |
| Msa0071250 | Msa0788540 | 0.803870 | 2.836526e-49 | -8.615850e-47 |
| Msa0079260 | Msa0788540 | 0.812388 | 4.348114e-51 | -8.615850e-47 |
| Msa0096030 | Msa0788540 | 0.811381 | 7.204440e-51 | -8.615850e-47 |
| Msa0096700 | Msa0788540 | 0.804770 | 1.841988e-49 | -8.615850e-47 |
| Msa0096980 | Msa0788540 | 0.807088 | 5.996557e-50 | -8.615850e-47 |
| Msa0098340 | Msa0788540 | 0.806555 | 7.772821e-50 | -8.615850e-47 |
| Msa0098990 | Msa0788540 | 0.806003 | 1.015740e-49 | -8.615850e-47 |
| Msa0101830 | Msa0788540 | 0.829577 | 4.761757e-55 | -8.615850e-47 |
| Msa0118540 | Msa0788540 | 0.811320 | 7.425528e-51 | -8.615850e-47 |
| Msa0604290 | Msa0788540 | 0.805975 | 1.029466e-49 | -8.615850e-47 |
| Msa0610130 | Msa0788540 | 0.807623 | 4.618449e-50 | -8.615850e-47 |
| Msa0610180 | Msa0788540 | 0.816364 | 5.745486e-52 | -8.615850e-47 |
| Msa0621790 | Msa0788540 | 0.807669 | 4.515378e-50 | -8.615850e-47 |
| Msa0630950 | Msa0788540 | 0.816924 | 4.302424e-52 | -8.615850e-47 |
| Msa0641670 | Msa0788540 | 0.802587 | 5.226389e-49 | -8.615850e-47 |
| Msa0649350 | Msa0788540 | 0.800127 | 1.667517e-48 | -8.615850e-47 |
| Msa0654620 | Msa0788540 | 0.809210 | 2.117700e-50 | -8.615850e-47 |
| Msa0657120 | Msa0788540 | 0.832763 | 7.852418e-56 | -8.615850e-47 |
| Msa0689780 | Msa0788540 | 0.802504 | 5.437467e-49 | -8.615850e-47 |
| Msa0701100 | Msa0788540 | 0.843063 | 1.764101e-58 | -8.615850e-47 |
| Msa0703910 | Msa0788540 | 0.819353 | 1.214611e-52 | -8.615850e-47 |
| Msa0705990 | Msa0788540 | 0.822006 | 2.983075e-53 | -8.615850e-47 |
| Msa0709160 | Msa0788540 | 0.825489 | 4.557890e-54 | -8.615850e-47 |
| Msa0721340 | Msa0788540 | 0.807331 | 5.325876e-50 | -8.615850e-47 |
| Msa0741070 | Msa0788540 | 0.802401 | 5.708975e-49 | -8.615850e-47 |
| Msa0742150 | Msa0788540 | 0.822444 | 2.361832e-53 | -8.615850e-47 |
| Msa0747260 | Msa0788540 | 0.803147 | 4.005718e-49 | -8.615850e-47 |
| Msa0748070 | Msa0788540 | 0.814212 | 1.728770e-51 | -8.615850e-47 |
| Msa0760350 | Msa0788540 | 0.804362 | 2.240926e-49 | -8.615850e-47 |
| Msa0763890 | Msa0788540 | 0.802466 | 5.535916e-49 | -8.615850e-47 |
| Msa0763920 | Msa0788540 | 0.811044 | 8.522355e-51 | -8.615850e-47 |
| Msa0775560 | Msa0788540 | 0.804055 | 2.595929e-49 | -8.615850e-47 |
| Msa0777620 | Msa0788540 | 0.823400 | 1.413563e-53 | -8.615850e-47 |
| Msa0788540 | Msa0795720 | 0.805649 | 1.205508e-49 | -8.615850e-47 |
| Msa0788540 | Msa0801730 | 0.823292 | 1.498489e-53 | -8.615850e-47 |
| Msa0788540 | Msa0808100 | 0.806819 | 6.835786e-50 | -8.615850e-47 |
| Msa0788540 | Msa0812950 | 0.832869 | 7.390790e-56 | -8.615850e-47 |
| Msa0788540 | Msa0823440 | 0.800171 | 1.633631e-48 | -8.615850e-47 |
| Msa0788540 | Msa0826150 | 0.804305 | 2.302029e-49 | -8.615850e-47 |
| Msa0788540 | Msa0831850 | 0.811861 | 5.665469e-51 | -8.615850e-47 |
| Msa0788540 | Msa0833460 | 0.819689 | 1.017718e-52 | -8.615850e-47 |
| Msa0788540 | Msa0844110 | 0.820767 | 5.765229e-53 | -8.615850e-47 |
| Msa0788540 | Msa0847470 | 0.822920 | 1.829509e-53 | -8.615850e-47 |
| Msa0788540 | Msa0849030 | 0.817744 | 2.813007e-52 | -8.615850e-47 |
| Msa0788540 | Msa0861130 | 0.801526 | 8.638426e-49 | -8.615850e-47 |
| Msa0788540 | Msa0861470 | 0.802921 | 4.460042e-49 | -8.615850e-47 |
| Msa0788540 | Msa0861570 | 0.805293 | 1.431965e-49 | -8.615850e-47 |
| Msa0788540 | Msa0877710 | 0.811195 | 7.905395e-51 | -8.615850e-47 |
| Msa0788540 | Msa0879600 | 0.811934 | 5.459903e-51 | -8.615850e-47 |
| Msa0788540 | Msa0880810 | 0.805746 | 1.150411e-49 | -8.615850e-47 |
| Msa0788540 | Msa0888260 | 0.817825 | 2.697531e-52 | -8.615850e-47 |
| Msa0788540 | Msa0894710 | 0.812349 | 4.433471e-51 | -8.615850e-47 |
| Msa0788540 | Msa0904640 | 0.822597 | 2.175499e-53 | -8.615850e-47 |
| Msa0788540 | Msa0923780 | 0.803505 | 3.376412e-49 | -8.615850e-47 |
| Msa0788540 | Msa0958920 | 0.836743 | 7.826781e-57 | -8.615850e-47 |
| Msa0788540 | Msa0962840 | 0.814763 | 1.305394e-51 | -8.615850e-47 |
| Msa0788540 | Msa0992600 | 0.818678 | 1.728974e-52 | -8.615850e-47 |
| Msa0788540 | Msa0994370 | 0.819673 | 1.026585e-52 | -8.615850e-47 |
| Msa0788540 | Msa1013070 | 0.801414 | 9.107723e-49 | -8.615850e-47 |
| Msa0788540 | Msa1018040 | 0.809442 | 1.888035e-50 | -8.615850e-47 |
| Msa0788540 | Msa1023300 | 0.818807 | 1.616354e-52 | -8.615850e-47 |
| Msa0788540 | Msa1023310 | 0.800398 | 1.468600e-48 | -8.615850e-47 |
| Msa0788540 | Msa1043050 | 0.800920 | 1.149096e-48 | -8.615850e-47 |
| Msa0788540 | Msa1062030 | 0.857451 | 1.617585e-62 | -8.615850e-47 |
| Msa0788540 | Msa1063420 | 0.816764 | 4.673722e-52 | -8.615850e-47 |
| Msa0788540 | Msa1071320 | 0.808681 | 2.747672e-50 | -8.615850e-47 |
| Msa0788540 | Msa1077340 | 0.822955 | 1.795204e-53 | -8.615850e-47 |
| Msa0788540 | Msa1081790 | -0.843143 | 1.680007e-58 | -8.615850e-47 |
| Msa0788540 | Msa1087990 | 0.818697 | 1.712495e-52 | -8.615850e-47 |
| Msa0788540 | Msa1089460 | 0.838608 | 2.599063e-57 | -8.615850e-47 |
| Msa0788540 | Msa1096950 | 0.800665 | 1.295674e-48 | -8.615850e-47 |
| Msa0788540 | Msa1107200 | 0.807616 | 4.632869e-50 | -8.615850e-47 |
| Msa0788540 | Msa1115280 | 0.805586 | 1.242995e-49 | -8.615850e-47 |
| Msa0788540 | Msa1122150 | 0.807510 | 4.878822e-50 | -8.615850e-47 |
| Msa0788540 | Msa1123710 | -0.814171 | 1.764571e-51 | -8.615850e-47 |
| Msa0788540 | Msa1140230 | 0.828485 | 8.756461e-55 | -8.615850e-47 |
| Msa0788540 | Msa1144040 | 0.851449 | 8.813337e-61 | -8.615850e-47 |
| Msa0788540 | Msa1150710 | 0.809502 | 1.833005e-50 | -8.615850e-47 |
| Msa0788540 | Msa1150790 | 0.811789 | 5.872217e-51 | -8.615850e-47 |
| Msa0788540 | Msa1150800 | 0.812464 | 4.183730e-51 | -8.615850e-47 |
| Msa0788540 | Msa1150810 | 0.814546 | 1.458221e-51 | -8.615850e-47 |
| Msa0788540 | Msa1164020 | 0.800089 | 1.696985e-48 | -8.615850e-47 |
| Msa0788540 | Msa1166090 | -0.837929 | 3.889501e-57 | -8.615850e-47 |
| Msa0788540 | Msa1169850 | -0.805044 | 1.614418e-49 | -8.615850e-47 |
| Msa0788540 | Msa1176710 | 0.800346 | 1.504786e-48 | -8.615850e-47 |
| Msa0788540 | Msa1180500 | 0.806103 | 9.676299e-50 | -8.615850e-47 |
| Msa0788540 | Msa1206270 | 0.804321 | 2.284708e-49 | -8.615850e-47 |
| Msa0788540 | Msa1206290 | 0.808377 | 3.190837e-50 | -8.615850e-47 |
| Msa0788540 | Msa1207310 | 0.801463 | 8.897465e-49 | -8.615850e-47 |
| Msa0788540 | Msa1207350 | 0.811008 | 8.678597e-51 | -8.615850e-47 |
| Msa0788540 | Msa1208370 | 0.806037 | 9.991416e-50 | -8.615850e-47 |
| Msa0788540 | Msa1208380 | 0.842809 | 2.061460e-58 | -8.615850e-47 |
| Msa0788540 | Msa1217470 | 0.810338 | 1.211282e-50 | -8.615850e-47 |
| Msa0788540 | Msa1218580 | 0.803816 | 2.909575e-49 | -8.615850e-47 |
| Msa0788540 | Msa1221330 | 0.822584 | 2.191094e-53 | -8.615850e-47 |
| Msa0788540 | Msa1231840 | 0.801539 | 8.583115e-49 | -8.615850e-47 |
| Msa0788540 | Msa1270660 | 0.826292 | 2.938700e-54 | -8.615850e-47 |
| Msa0788540 | Msa1270730 | 0.829388 | 5.293022e-55 | -8.615850e-47 |
| Msa0788540 | Msa1276440 | 0.811322 | 7.418532e-51 | -8.615850e-47 |
| Msa0788540 | Msa1280320 | 0.804071 | 2.575161e-49 | -8.615850e-47 |
| Msa0788540 | Msa1280340 | 0.801156 | 1.028305e-48 | -8.615850e-47 |
| Msa0788540 | Msa1295330 | 0.821741 | 3.436374e-53 | -8.615850e-47 |
| Msa0788540 | Msa1295930 | 0.803361 | 3.617217e-49 | -8.615850e-47 |
| Msa0788540 | Msa1307180 | 0.801386 | 9.228666e-49 | -8.615850e-47 |
| Msa0788540 | Msa1312520 | 0.806642 | 7.450387e-50 | -8.615850e-47 |
| Msa0788540 | Msa1316360 | 0.815915 | 7.238339e-52 | -8.615850e-47 |
| Msa0788540 | Msa1332050 | 0.809781 | 1.596660e-50 | -8.615850e-47 |
| Msa0788540 | Msa1335230 | 0.803320 | 3.687267e-49 | -8.615850e-47 |
| Msa0788540 | Msa1339190 | 0.805443 | 1.331817e-49 | -8.615850e-47 |
| Msa0788540 | Msa1342100 | 0.809614 | 1.734342e-50 | -8.615850e-47 |
| Msa0788540 | Msa1344660 | 0.810406 | 1.171383e-50 | -8.615850e-47 |
| Msa0788540 | Msa1348600 | 0.811905 | 5.541580e-51 | -8.615850e-47 |
| Msa0788540 | Msa1348850 | 0.828359 | 9.393474e-55 | -8.615850e-47 |
| Msa0788540 | Msa1355890 | 0.822611 | 2.159673e-53 | -8.615850e-47 |
| Msa0788540 | Msa1357430 | 0.820631 | 6.193545e-53 | -8.615850e-47 |
| Msa0788540 | Msa1368360 | 0.824520 | 7.722209e-54 | -8.615850e-47 |
| Msa0788540 | Msa1371240 | 0.817129 | 3.870670e-52 | -8.615850e-47 |
| Msa0788540 | Msa1374710 | 0.815119 | 1.088603e-51 | -8.615850e-47 |
| Msa0788540 | Msa1377080 | 0.819104 | 1.383642e-52 | -8.615850e-47 |
| Msa0788540 | Msa1382020 | 0.828034 | 1.125188e-54 | -8.615850e-47 |
| Msa0788540 | Msa1388860 | 0.819807 | 9.565714e-53 | -8.615850e-47 |
| Msa0788540 | Msa1396400 | -0.835084 | 2.061451e-56 | -8.615850e-47 |
| Msa0788540 | Msa1412070 | 0.817314 | 3.516892e-52 | -8.615850e-47 |
| Msa0788540 | Msa1412130 | 0.800479 | 1.413732e-48 | -8.615850e-47 |
| Msa0788540 | Msa1420270 | 0.810826 | 9.503587e-51 | -8.615850e-47 |
| Msa0788540 | Msa1422810 | 0.816318 | 5.882362e-52 | -8.615850e-47 |
| Msa0788540 | Msa1428780 | 0.803216 | 3.874863e-49 | -8.615850e-47 |
| Msa0788540 | Msa1430130 | 0.838585 | 2.635888e-57 | -8.615850e-47 |
| Msa0788540 | Msa1432630 | 0.821782 | 3.361836e-53 | -8.615850e-47 |
| Msa0788540 | Msa1436600 | 0.804215 | 2.404063e-49 | -8.615850e-47 |
| Msa0788540 | Msa1437270 | 0.806345 | 8.605265e-50 | -8.615850e-47 |
| Msa0788540 | Msa1437910 | 0.826241 | 3.021920e-54 | -8.615850e-47 |
| Msa0788540 | Msa1438840 | 0.828300 | 9.704455e-55 | -8.615850e-47 |
| Msa0788540 | Msa1447890 | 0.806685 | 7.296829e-50 | -8.615850e-47 |
| Msa0788540 | Msa1460750 | 0.838909 | 2.172881e-57 | -8.615850e-47 |
| Msa0130520 | Msa0788540 | 0.801337 | 9.444977e-49 | -8.615850e-47 |
| Msa0135410 | Msa0788540 | 0.809451 | 1.880090e-50 | -8.615850e-47 |
| Msa0137570 | Msa0788540 | 0.801988 | 6.943620e-49 | -8.615850e-47 |
| Msa0138020 | Msa0788540 | 0.836683 | 8.103630e-57 | -8.615850e-47 |
| Msa0142500 | Msa0788540 | 0.802215 | 6.236682e-49 | -8.615850e-47 |
| Msa0145010 | Msa0788540 | 0.802881 | 4.544761e-49 | -8.615850e-47 |
| Msa0152560 | Msa0788540 | 0.806002 | 1.016080e-49 | -8.615850e-47 |
| Msa0153830 | Msa0788540 | 0.809575 | 1.768612e-50 | -8.615850e-47 |
| Msa0155340 | Msa0788540 | 0.829928 | 3.912578e-55 | -8.615850e-47 |
| Msa0162130 | Msa0788540 | 0.812943 | 3.287079e-51 | -8.615850e-47 |
| Msa0172000 | Msa0788540 | 0.822238 | 2.636442e-53 | -8.615850e-47 |
| Msa0180510 | Msa0788540 | -0.808935 | 2.424839e-50 | -8.615850e-47 |
| Msa0187490 | Msa0788540 | 0.803842 | 2.873517e-49 | -8.615850e-47 |
| Msa0187950 | Msa0788540 | 0.806996 | 6.269403e-50 | -8.615850e-47 |
| Msa0189030 | Msa0788540 | 0.850982 | 1.193818e-60 | -8.615850e-47 |
| Msa0189520 | Msa0788540 | 0.800923 | 1.147678e-48 | -8.615850e-47 |
| Msa0196670 | Msa0788540 | 0.809233 | 2.093479e-50 | -8.615850e-47 |
| Msa0197610 | Msa0788540 | 0.817490 | 3.209355e-52 | -8.615850e-47 |
| Msa0200650 | Msa0788540 | 0.816252 | 6.084495e-52 | -8.615850e-47 |
| Msa0202930 | Msa0788540 | 0.801720 | 7.880709e-49 | -8.615850e-47 |
| Msa0206010 | Msa0788540 | 0.821136 | 4.740842e-53 | -8.615850e-47 |
| Msa0223120 | Msa0788540 | 0.810382 | 1.185414e-50 | -8.615850e-47 |
| Msa0226180 | Msa0788540 | 0.813497 | 2.483977e-51 | -8.615850e-47 |
| Msa0233370 | Msa0788540 | 0.819600 | 1.066716e-52 | -8.615850e-47 |
| Msa0236420 | Msa0788540 | 0.835982 | 1.221715e-56 | -8.615850e-47 |
| Msa0371950 | Msa0788540 | 0.825612 | 4.261904e-54 | -8.615850e-47 |
| Msa0385490 | Msa0788540 | 0.801694 | 7.977462e-49 | -8.615850e-47 |
| Msa0388730 | Msa0788540 | 0.845103 | 5.003859e-59 | -8.615850e-47 |
| Msa0403770 | Msa0788540 | 0.810807 | 9.590563e-51 | -8.615850e-47 |
| Msa0417330 | Msa0788540 | 0.811184 | 7.950282e-51 | -8.615850e-47 |
| Msa0433530 | Msa0788540 | 0.802885 | 4.536878e-49 | -8.615850e-47 |
| Msa0434180 | Msa0788540 | 0.800141 | 1.656486e-48 | -8.615850e-47 |
| Msa0436190 | Msa0788540 | 0.804257 | 2.356198e-49 | -8.615850e-47 |
| Msa0438040 | Msa0788540 | 0.833846 | 4.217198e-56 | -8.615850e-47 |
| Msa0455590 | Msa0788540 | 0.842730 | 2.163232e-58 | -8.615850e-47 |
| Msa0457510 | Msa0788540 | 0.800314 | 1.527314e-48 | -8.615850e-47 |
| Msa0471900 | Msa0788540 | 0.811048 | 8.507126e-51 | -8.615850e-47 |
| Msa0477260 | Msa0788540 | 0.827330 | 1.660293e-54 | -8.615850e-47 |
| Msa0481280 | Msa0788540 | 0.842649 | 2.273468e-58 | -8.615850e-47 |
| Msa0257500 | Msa0788540 | 0.806260 | 8.967736e-50 | -8.615850e-47 |
| Msa0261720 | Msa0788540 | 0.804954 | 1.685958e-49 | -8.615850e-47 |
| Msa0262370 | Msa0788540 | 0.812961 | 3.258131e-51 | -8.615850e-47 |
| Msa0265150 | Msa0788540 | 0.823542 | 1.309705e-53 | -8.615850e-47 |
| Msa0270960 | Msa0788540 | 0.837556 | 4.848807e-57 | -8.615850e-47 |
| Msa0271360 | Msa0788540 | 0.810651 | 1.036751e-50 | -8.615850e-47 |
| Msa0271890 | Msa0788540 | 0.808458 | 3.066054e-50 | -8.615850e-47 |
| Msa0278580 | Msa0788540 | 0.833410 | 5.420552e-56 | -8.615850e-47 |
| Msa0295330 | Msa0788540 | 0.801866 | 7.357634e-49 | -8.615850e-47 |
| Msa0296980 | Msa0788540 | -0.805443 | 1.331625e-49 | -8.615850e-47 |
| Msa0301070 | Msa0788540 | 0.800263 | 1.564739e-48 | -8.615850e-47 |
| Msa0307310 | Msa0788540 | 0.810292 | 1.239658e-50 | -8.615850e-47 |
| Msa0309270 | Msa0788540 | 0.849625 | 2.867063e-60 | -8.615850e-47 |
| Msa0310860 | Msa0788540 | 0.811673 | 6.224234e-51 | -8.615850e-47 |
| Msa0311470 | Msa0788540 | 0.818716 | 1.695132e-52 | -8.615850e-47 |
| Msa0317960 | Msa0788540 | 0.835828 | 1.337071e-56 | -8.615850e-47 |
| Msa0319290 | Msa0788540 | 0.813312 | 2.728017e-51 | -8.615850e-47 |
| Msa0326110 | Msa0788540 | 0.823284 | 1.505021e-53 | -8.615850e-47 |
| Msa0335060 | Msa0788540 | 0.818269 | 2.140879e-52 | -8.615850e-47 |
| Msa0337590 | Msa0788540 | 0.800433 | 1.444390e-48 | -8.615850e-47 |
| Msa0343850 | Msa0788540 | 0.804733 | 1.874719e-49 | -8.615850e-47 |
| Msa0358860 | Msa0788540 | 0.815170 | 1.060566e-51 | -8.615850e-47 |
| Msa0485490 | Msa0788540 | 0.807153 | 5.808005e-50 | -8.615850e-47 |
| Msa0486820 | Msa0788540 | 0.818769 | 1.648911e-52 | -8.615850e-47 |
| Msa0522070 | Msa0788540 | 0.811093 | 8.316195e-51 | -8.615850e-47 |
| Msa0524600 | Msa0788540 | 0.815667 | 8.221960e-52 | -8.615850e-47 |
| Msa0534410 | Msa0788540 | 0.822971 | 1.779845e-53 | -8.615850e-47 |
| Msa0549780 | Msa0788540 | 0.801250 | 9.838129e-49 | -8.615850e-47 |
| Msa0566350 | Msa0788540 | 0.819577 | 1.079504e-52 | -8.615850e-47 |
| Msa0566750 | Msa0788540 | 0.817239 | 3.655929e-52 | -8.615850e-47 |
| Msa0580530 | Msa0788540 | 0.801432 | 9.030659e-49 | -8.615850e-47 |
| Msa0581400 | Msa0788540 | 0.804096 | 2.544736e-49 | -8.615850e-47 |
| Msa0588240 | Msa0788540 | 0.806928 | 6.482270e-50 | -8.615850e-47 |
| Msa0601390 | Msa0788540 | 0.812821 | 3.495845e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788540 | MtrunA17_Chr5g0447111 | 93.333 | 330 | 20 | 1 | 1 | 328 | 1 | 330 | 0.0 | 637 |
| Msa0788540 | MtrunA17_Chr3g0103031 | 63.830 | 329 | 116 | 3 | 1 | 327 | 1 | 328 | 2.79e-151 | 427 |
| Msa0788540 | MtrunA17_Chr3g0124921 | 47.205 | 322 | 165 | 4 | 5 | 323 | 2 | 321 | 8.11e-101 | 300 |
| Msa0788540 | MtrunA17_Chr1g0159831 | 44.954 | 327 | 173 | 4 | 7 | 327 | 5 | 330 | 2.84e-99 | 296 |
| Msa0788540 | MtrunA17_Chr5g0447191 | 54.706 | 170 | 76 | 1 | 155 | 323 | 18 | 187 | 6.10e-59 | 187 |
| Msa0788540 | MtrunA17_Chr4g0029841 | 32.589 | 224 | 127 | 5 | 98 | 321 | 77 | 276 | 1.94e-27 | 108 |
| Msa0788540 | MtrunA17_Chr3g0114411 | 34.337 | 166 | 101 | 4 | 133 | 292 | 70 | 233 | 9.35e-14 | 70.5 |
| Msa0788540 | MtrunA17_Chr3g0125321 | 40.230 | 87 | 47 | 2 | 174 | 258 | 94 | 177 | 2.40e-11 | 63.2 |
| Msa0788540 | MtrunA17_Chr1g0185861 | 27.815 | 151 | 97 | 3 | 153 | 292 | 201 | 350 | 2.50e-11 | 64.3 |
| Msa0788540 | MtrunA17_Chr5g0394261 | 26.531 | 147 | 105 | 3 | 157 | 302 | 530 | 674 | 2.77e-11 | 64.7 |
| Msa0788540 | MtrunA17_Chr7g0259851 | 28.462 | 130 | 91 | 2 | 163 | 292 | 526 | 653 | 2.81e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0788540 | AT1G55760.1 | 56.402 | 328 | 141 | 2 | 1 | 327 | 1 | 327 | 5.50e-136 | 389 |
| Msa0788540 | AT1G21780.2 | 48.137 | 322 | 164 | 3 | 7 | 327 | 5 | 324 | 5.49e-110 | 323 |
| Msa0788540 | AT1G21780.1 | 48.137 | 322 | 164 | 3 | 7 | 327 | 5 | 324 | 5.49e-110 | 323 |
| Msa0788540 | AT3G56230.1 | 31.169 | 154 | 103 | 3 | 142 | 292 | 90 | 243 | 9.28e-15 | 73.9 |
| Msa0788540 | AT1G01640.1 | 29.255 | 188 | 129 | 4 | 142 | 327 | 3 | 188 | 1.37e-14 | 72.0 |
| Msa0788540 | AT1G01640.2 | 29.586 | 169 | 115 | 4 | 161 | 327 | 1 | 167 | 2.52e-13 | 68.2 |
| Msa0788540 | AT1G05690.1 | 26.415 | 159 | 108 | 4 | 149 | 301 | 40 | 195 | 4.67e-12 | 66.6 |
| Msa0788540 | AT2G30600.4 | 29.747 | 158 | 104 | 4 | 125 | 275 | 311 | 468 | 9.31e-12 | 66.6 |
| Msa0788540 | AT2G30600.1 | 29.747 | 158 | 104 | 4 | 125 | 275 | 311 | 468 | 9.31e-12 | 66.6 |
| Msa0788540 | AT2G30600.3 | 29.747 | 158 | 104 | 4 | 125 | 275 | 311 | 468 | 9.31e-12 | 66.6 |
| Msa0788540 | AT2G30600.2 | 29.747 | 158 | 104 | 4 | 125 | 275 | 311 | 468 | 9.31e-12 | 66.6 |
| Msa0788540 | AT2G30600.6 | 29.747 | 158 | 104 | 4 | 125 | 275 | 311 | 468 | 9.40e-12 | 66.6 |
| Msa0788540 | AT4G08455.1 | 35.398 | 113 | 64 | 4 | 162 | 268 | 90 | 199 | 2.03e-11 | 63.9 |
| Msa0788540 | AT2G39760.2 | 28.571 | 147 | 93 | 2 | 156 | 291 | 187 | 332 | 2.68e-11 | 64.3 |
| Msa0788540 | AT2G39760.4 | 28.571 | 147 | 93 | 2 | 156 | 291 | 187 | 332 | 3.21e-11 | 63.9 |
| Msa0788540 | AT2G39760.3 | 28.571 | 147 | 93 | 2 | 156 | 291 | 187 | 332 | 3.21e-11 | 63.9 |
| Msa0788540 | AT5G63160.2 | 28.824 | 170 | 114 | 4 | 161 | 325 | 23 | 190 | 3.77e-11 | 63.5 |
| Msa0788540 | AT5G63160.1 | 28.824 | 170 | 114 | 4 | 161 | 325 | 23 | 190 | 4.74e-11 | 63.5 |
| Msa0788540 | AT2G39760.1 | 28.571 | 147 | 93 | 2 | 156 | 291 | 187 | 332 | 5.37e-11 | 63.5 |
Find 55 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATAATTGACATTGAGTTTC+TGG | 0.099574 | 5_2:+75336811 | Msa0788540:CDS |
| TATAGGCAGTGCTCTTTATT+TGG | 0.152672 | 5_2:+75337842 | Msa0788540:three_prime_UTR |
| GTGCAATATCTTGTGAAATT+TGG | 0.214576 | 5_2:+75337594 | Msa0788540:CDS |
| TAGATAGGTTGTTTGGTTAT+TGG | 0.217086 | 5_2:+75337773 | Msa0788540:three_prime_UTR |
| ATTGATACAAAGATGCAATT+TGG | 0.251499 | 5_2:-75337548 | None:intergenic |
| TGACATGTCGGTGATGTTTA+TGG | 0.257723 | 5_2:-75337346 | None:intergenic |
| GCTTGCTCTATTTGGTCTAA+TGG | 0.285746 | 5_2:+75337129 | Msa0788540:CDS |
| CCATTGAACTAGACGATTCA+TGG | 0.288711 | 5_2:-75336290 | None:intergenic |
| CAATTGCATCTTTCATAGTT+AGG | 0.300214 | 5_2:+75336544 | Msa0788540:CDS |
| GTGGGGAAGCTTGCTCTATT+TGG | 0.307214 | 5_2:+75337121 | Msa0788540:CDS |
| GATAGCTTTGTGTGGGAGAT+TGG | 0.337706 | 5_2:+75336767 | Msa0788540:CDS |
| AGGATTGTGTGTGATTGTTT+TGG | 0.337739 | 5_2:-75336520 | None:intergenic |
| AGAATTTCTTATACATAGAT+TGG | 0.343658 | 5_2:+75337422 | Msa0788540:CDS |
| CTAAACATAGATAGGTTGTT+TGG | 0.351077 | 5_2:+75337766 | Msa0788540:three_prime_UTR |
| ACTTGTCAGCCGCATGTAAT+AGG | 0.362904 | 5_2:-75337446 | None:intergenic |
| GAATCCTTTGGTCGAATGAT+AGG | 0.364581 | 5_2:+75337186 | Msa0788540:CDS |
| ATTTCAATGTATATATATAT+AGG | 0.365892 | 5_2:+75337825 | Msa0788540:three_prime_UTR |
| TCAAAGAAATTCTTGATGCT+TGG | 0.368629 | 5_2:+75337691 | Msa0788540:CDS |
| AGATAAACTTCTTAGCAATA+AGG | 0.369571 | 5_2:+75336745 | Msa0788540:CDS |
| AGCAAAATCTTGACTCAATC+AGG | 0.374788 | 5_2:+75336588 | Msa0788540:CDS |
| GTTAGGATTCTTAGTTATGC+TGG | 0.386999 | 5_2:+75336561 | Msa0788540:CDS |
| TCAAAATAGCCATGTGGAAC+TGG | 0.403978 | 5_2:+75336359 | Msa0788540:CDS |
| GCAGCAGCCCTTGAATCCTT+TGG | 0.410158 | 5_2:+75337174 | Msa0788540:CDS |
| AAAGAAAATTTATAAACGTC+TGG | 0.434882 | 5_2:-75337380 | None:intergenic |
| CTAACTATGAAAGATGCAAT+TGG | 0.440177 | 5_2:-75336543 | None:intergenic |
| AGATTCTACTAAACATAGAT+AGG | 0.442473 | 5_2:+75337758 | Msa0788540:three_prime_UTR |
| CACAATCCAAGTTGACAACT+TGG | 0.446067 | 5_2:-75336156 | None:intergenic |
| ATGAGCTCTTATGCTTCCTT+CGG | 0.452327 | 5_2:-75337247 | None:intergenic |
| CCATGAATCGTCTAGTTCAA+TGG | 0.453483 | 5_2:+75336290 | Msa0788540:CDS |
| TCATTCGACCAAAGGATTCA+AGG | 0.473708 | 5_2:-75337182 | None:intergenic |
| TGACAACTTGGAAACATGAT+AGG | 0.478674 | 5_2:-75336144 | None:intergenic |
| GGCAAAATATATGATATTCA+AGG | 0.488841 | 5_2:+75337615 | Msa0788540:CDS |
| ATGTTTCCAAGTTGTCAACT+TGG | 0.490494 | 5_2:+75336150 | Msa0788540:five_prime_UTR |
| TTCTCCTATCATTCGACCAA+AGG | 0.495648 | 5_2:-75337190 | None:intergenic |
| TTTGAAAATTTCATGTCCAA+AGG | 0.520798 | 5_2:+75336835 | Msa0788540:CDS |
| GAAATAACATTGTCTAGGAC+AGG | 0.529545 | 5_2:-75336081 | None:intergenic |
| AGAAAGAAAGAAACAAAAGA+AGG | 0.534724 | 5_2:-75336103 | None:intergenic |
| AGAAGGAAATAACATTGTCT+AGG | 0.540582 | 5_2:-75336086 | None:intergenic |
| GAGATTGGAGTTCCATTACC+TGG | 0.545273 | 5_2:+75336782 | Msa0788540:CDS |
| ACTATGAAAGATGCAATTGG+AGG | 0.556805 | 5_2:-75336540 | None:intergenic |
| CATTCGACCAAAGGATTCAA+GGG | 0.558686 | 5_2:-75337181 | None:intergenic |
| CAATAAGGATAGCTTTGTGT+GGG | 0.566302 | 5_2:+75336760 | Msa0788540:CDS |
| AGTTGTCAACTTGGATTGTG+AGG | 0.606774 | 5_2:+75336159 | Msa0788540:five_prime_UTR |
| GATATGAAGGCATTTATCAG+TGG | 0.615660 | 5_2:+75336455 | Msa0788540:intron |
| GCAATAAGGATAGCTTTGTG+TGG | 0.617349 | 5_2:+75336759 | Msa0788540:CDS |
| ACAATCAACGTCAATTCCGA+AGG | 0.618813 | 5_2:+75337231 | Msa0788540:CDS |
| CACATTAGAGTGCTAAACAC+AGG | 0.641551 | 5_2:-75337872 | None:intergenic |
| TTGACTTTACCAGTTCCACA+TGG | 0.646739 | 5_2:-75336368 | None:intergenic |
| TTATCAGTGGAAAAGAACTG+TGG | 0.666641 | 5_2:+75336468 | Msa0788540:CDS |
| GAAAGATTGAATTGACATGT+CGG | 0.685189 | 5_2:-75337358 | None:intergenic |
| GTCAAACACAGGTGATTGTG+AGG | 0.685218 | 5_2:-75337283 | None:intergenic |
| TAGATTGGACCTATTACATG+CGG | 0.685610 | 5_2:+75337437 | Msa0788540:CDS |
| TGATATCTATGAGTTAAGAG+AGG | 0.687061 | 5_2:+75337470 | Msa0788540:CDS |
| GAAAACATGCTGTCAAACAC+AGG | 0.701282 | 5_2:-75337294 | None:intergenic |
| ATCCATTCAAAATAGCCATG+TGG | 0.702367 | 5_2:+75336353 | Msa0788540:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACAAAATATAAAGTAAA+TGG | - | chr5_2:75336990-75337009 | None:intergenic | 10.0% |
| !! | ATTTCAATGTATATATATAT+AGG | + | chr5_2:75337825-75337844 | Msa0788540:three_prime_UTR | 10.0% |
| !! | TAAACAAAATATAAAGTAAA+TGG | - | chr5_2:75336990-75337009 | None:intergenic | 10.0% |
| !! | ATTTCAATGTATATATATAT+AGG | + | chr5_2:75337825-75337844 | Msa0788540:three_prime_UTR | 10.0% |
| !!! | ATCAAGCAAAATTTTAAATT+AGG | - | chr5_2:75337090-75337109 | None:intergenic | 15.0% |
| !!! | ACGTTTATAAATTTTCTTTA+TGG | + | chr5_2:75337384-75337403 | Msa0788540:CDS | 15.0% |
| !! | AGAAAAAAATAAAACAATCA+TGG | - | chr5_2:75337803-75337822 | None:intergenic | 15.0% |
| !!! | ATCAAGCAAAATTTTAAATT+AGG | - | chr5_2:75337090-75337109 | None:intergenic | 15.0% |
| !!! | ACGTTTATAAATTTTCTTTA+TGG | + | chr5_2:75337384-75337403 | Msa0788540:CDS | 15.0% |
| !! | AGAAAAAAATAAAACAATCA+TGG | - | chr5_2:75337803-75337822 | None:intergenic | 15.0% |
| !! | ATTATATACTTACATACCTT+TGG | - | chr5_2:75336854-75336873 | None:intergenic | 20.0% |
| !! | ATGGATAACTAATAAAAGTA+TGG | - | chr5_2:75336881-75336900 | None:intergenic | 20.0% |
| !!! | ATTTTGCTTGATTTGAATAA+AGG | + | chr5_2:75337098-75337117 | Msa0788540:intron | 20.0% |
| !!! | TTTTGCTTGATTTGAATAAA+GGG | + | chr5_2:75337099-75337118 | Msa0788540:intron | 20.0% |
| !! | AAAGAAAATTTATAAACGTC+TGG | - | chr5_2:75337383-75337402 | None:intergenic | 20.0% |
| !! | AGAATTTCTTATACATAGAT+TGG | + | chr5_2:75337422-75337441 | Msa0788540:CDS | 20.0% |
| !!! | TCTTCCAAATTTTTAAAGAT+AGG | + | chr5_2:75337729-75337748 | Msa0788540:three_prime_UTR | 20.0% |
| !!! | TCTTCCTATCTTTAAAAATT+TGG | - | chr5_2:75337736-75337755 | None:intergenic | 20.0% |
| !! | ATTATATACTTACATACCTT+TGG | - | chr5_2:75336854-75336873 | None:intergenic | 20.0% |
| !! | ATGGATAACTAATAAAAGTA+TGG | - | chr5_2:75336881-75336900 | None:intergenic | 20.0% |
| !!! | ATTTTGCTTGATTTGAATAA+AGG | + | chr5_2:75337098-75337117 | Msa0788540:intron | 20.0% |
| !!! | TTTTGCTTGATTTGAATAAA+GGG | + | chr5_2:75337099-75337118 | Msa0788540:intron | 20.0% |
| !! | AAAGAAAATTTATAAACGTC+TGG | - | chr5_2:75337383-75337402 | None:intergenic | 20.0% |
| !! | AGAATTTCTTATACATAGAT+TGG | + | chr5_2:75337422-75337441 | Msa0788540:CDS | 20.0% |
| !!! | TCTTCCAAATTTTTAAAGAT+AGG | + | chr5_2:75337729-75337748 | Msa0788540:three_prime_UTR | 20.0% |
| !!! | TCTTCCTATCTTTAAAAATT+TGG | - | chr5_2:75337736-75337755 | None:intergenic | 20.0% |
| ! | AGAAAGAAAGAAACAAAAGA+AGG | - | chr5_2:75336106-75336125 | None:intergenic | 25.0% |
| !!! | TCTTTTGTTTCTTTCTTTCT+TGG | + | chr5_2:75336106-75336125 | Msa0788540:five_prime_UTR | 25.0% |
| !! | GAAGTACAAGAATTCTTTTA+AGG | - | chr5_2:75336239-75336258 | None:intergenic | 25.0% |
| !!! | GTTTTGTTCTTATGATATGA+AGG | + | chr5_2:75336442-75336461 | Msa0788540:intron | 25.0% |
| ! | AGATAAACTTCTTAGCAATA+AGG | + | chr5_2:75336745-75336764 | Msa0788540:CDS | 25.0% |
| !! | ATTATGAATTTTCCAGGTAA+TGG | - | chr5_2:75336797-75336816 | None:intergenic | 25.0% |
| !! | ATGTCAATTATGAATTTTCC+AGG | - | chr5_2:75336803-75336822 | None:intergenic | 25.0% |
| ! | TTTGAAAATTTCATGTCCAA+AGG | + | chr5_2:75336835-75336854 | Msa0788540:CDS | 25.0% |
| !! | ACTTTTATTAGTTATCCATG+TGG | + | chr5_2:75336882-75336901 | Msa0788540:intron | 25.0% |
| !!! | ATAATCATAGTATTGATCTG+AGG | + | chr5_2:75337041-75337060 | Msa0788540:intron | 25.0% |
| !!! | TAATCATAGTATTGATCTGA+GGG | + | chr5_2:75337042-75337061 | Msa0788540:intron | 25.0% |
| ! | ATTGATACAAAGATGCAATT+TGG | - | chr5_2:75337551-75337570 | None:intergenic | 25.0% |
| ! | GGCAAAATATATGATATTCA+AGG | + | chr5_2:75337615-75337634 | Msa0788540:CDS | 25.0% |
| ! | AGATTCTACTAAACATAGAT+AGG | + | chr5_2:75337758-75337777 | Msa0788540:three_prime_UTR | 25.0% |
| ! | AGAAAGAAAGAAACAAAAGA+AGG | - | chr5_2:75336106-75336125 | None:intergenic | 25.0% |
| !!! | TCTTTTGTTTCTTTCTTTCT+TGG | + | chr5_2:75336106-75336125 | Msa0788540:five_prime_UTR | 25.0% |
| !! | GAAGTACAAGAATTCTTTTA+AGG | - | chr5_2:75336239-75336258 | None:intergenic | 25.0% |
| !!! | GTTTTGTTCTTATGATATGA+AGG | + | chr5_2:75336442-75336461 | Msa0788540:intron | 25.0% |
| ! | AGATAAACTTCTTAGCAATA+AGG | + | chr5_2:75336745-75336764 | Msa0788540:CDS | 25.0% |
| !! | ATTATGAATTTTCCAGGTAA+TGG | - | chr5_2:75336797-75336816 | None:intergenic | 25.0% |
| !! | ATGTCAATTATGAATTTTCC+AGG | - | chr5_2:75336803-75336822 | None:intergenic | 25.0% |
| ! | TTTGAAAATTTCATGTCCAA+AGG | + | chr5_2:75336835-75336854 | Msa0788540:CDS | 25.0% |
| !! | ACTTTTATTAGTTATCCATG+TGG | + | chr5_2:75336882-75336901 | Msa0788540:intron | 25.0% |
| !!! | ATAATCATAGTATTGATCTG+AGG | + | chr5_2:75337041-75337060 | Msa0788540:intron | 25.0% |
| !!! | TAATCATAGTATTGATCTGA+GGG | + | chr5_2:75337042-75337061 | Msa0788540:intron | 25.0% |
| ! | ATTGATACAAAGATGCAATT+TGG | - | chr5_2:75337551-75337570 | None:intergenic | 25.0% |
| ! | GGCAAAATATATGATATTCA+AGG | + | chr5_2:75337615-75337634 | Msa0788540:CDS | 25.0% |
| ! | AGATTCTACTAAACATAGAT+AGG | + | chr5_2:75337758-75337777 | Msa0788540:three_prime_UTR | 25.0% |
| AGAAGGAAATAACATTGTCT+AGG | - | chr5_2:75336089-75336108 | None:intergenic | 30.0% | |
| CTAACTATGAAAGATGCAAT+TGG | - | chr5_2:75336546-75336565 | None:intergenic | 30.0% | |
| CAATTGCATCTTTCATAGTT+AGG | + | chr5_2:75336544-75336563 | Msa0788540:CDS | 30.0% | |
| !!! | CTTTTATTTCTACATCAGTG+TGG | - | chr5_2:75336727-75336746 | None:intergenic | 30.0% |
| CATAATTGACATTGAGTTTC+TGG | + | chr5_2:75336811-75336830 | Msa0788540:CDS | 30.0% | |
| ! | CATGTTTTCACACAATGTTA+AGG | + | chr5_2:75337308-75337327 | Msa0788540:CDS | 30.0% |
| GAAAGATTGAATTGACATGT+CGG | - | chr5_2:75337361-75337380 | None:intergenic | 30.0% | |
| TGATATCTATGAGTTAAGAG+AGG | + | chr5_2:75337470-75337489 | Msa0788540:CDS | 30.0% | |
| !!! | AGTCTCTCAAGTACATTTTT+TGG | - | chr5_2:75337528-75337547 | None:intergenic | 30.0% |
| GTGCAATATCTTGTGAAATT+TGG | + | chr5_2:75337594-75337613 | Msa0788540:CDS | 30.0% | |
| TCAAAGAAATTCTTGATGCT+TGG | + | chr5_2:75337691-75337710 | Msa0788540:CDS | 30.0% | |
| CTAAACATAGATAGGTTGTT+TGG | + | chr5_2:75337766-75337785 | Msa0788540:three_prime_UTR | 30.0% | |
| TAGATAGGTTGTTTGGTTAT+TGG | + | chr5_2:75337773-75337792 | Msa0788540:three_prime_UTR | 30.0% | |
| AGAAGGAAATAACATTGTCT+AGG | - | chr5_2:75336089-75336108 | None:intergenic | 30.0% | |
| CTAACTATGAAAGATGCAAT+TGG | - | chr5_2:75336546-75336565 | None:intergenic | 30.0% | |
| CAATTGCATCTTTCATAGTT+AGG | + | chr5_2:75336544-75336563 | Msa0788540:CDS | 30.0% | |
| !!! | CTTTTATTTCTACATCAGTG+TGG | - | chr5_2:75336727-75336746 | None:intergenic | 30.0% |
| CATAATTGACATTGAGTTTC+TGG | + | chr5_2:75336811-75336830 | Msa0788540:CDS | 30.0% | |
| ! | CATGTTTTCACACAATGTTA+AGG | + | chr5_2:75337308-75337327 | Msa0788540:CDS | 30.0% |
| GAAAGATTGAATTGACATGT+CGG | - | chr5_2:75337361-75337380 | None:intergenic | 30.0% | |
| TGATATCTATGAGTTAAGAG+AGG | + | chr5_2:75337470-75337489 | Msa0788540:CDS | 30.0% | |
| !!! | AGTCTCTCAAGTACATTTTT+TGG | - | chr5_2:75337528-75337547 | None:intergenic | 30.0% |
| GTGCAATATCTTGTGAAATT+TGG | + | chr5_2:75337594-75337613 | Msa0788540:CDS | 30.0% | |
| TCAAAGAAATTCTTGATGCT+TGG | + | chr5_2:75337691-75337710 | Msa0788540:CDS | 30.0% | |
| CTAAACATAGATAGGTTGTT+TGG | + | chr5_2:75337766-75337785 | Msa0788540:three_prime_UTR | 30.0% | |
| TAGATAGGTTGTTTGGTTAT+TGG | + | chr5_2:75337773-75337792 | Msa0788540:three_prime_UTR | 30.0% | |
| ! | GAAATAACATTGTCTAGGAC+AGG | - | chr5_2:75336084-75336103 | None:intergenic | 35.0% |
| TGACAACTTGGAAACATGAT+AGG | - | chr5_2:75336147-75336166 | None:intergenic | 35.0% | |
| ATGTTTCCAAGTTGTCAACT+TGG | + | chr5_2:75336150-75336169 | Msa0788540:five_prime_UTR | 35.0% | |
| ATCCATTCAAAATAGCCATG+TGG | + | chr5_2:75336353-75336372 | Msa0788540:CDS | 35.0% | |
| !! | TTCCACATGGCTATTTTGAA+TGG | - | chr5_2:75336358-75336377 | None:intergenic | 35.0% |
| !! | GATATGAAGGCATTTATCAG+TGG | + | chr5_2:75336455-75336474 | Msa0788540:intron | 35.0% |
| TTATCAGTGGAAAAGAACTG+TGG | + | chr5_2:75336468-75336487 | Msa0788540:CDS | 35.0% | |
| !!! | GTGATTGTTTTGGACATTTC+TGG | - | chr5_2:75336513-75336532 | None:intergenic | 35.0% |
| ! | AGGATTGTGTGTGATTGTTT+TGG | - | chr5_2:75336523-75336542 | None:intergenic | 35.0% |
| ACTATGAAAGATGCAATTGG+AGG | - | chr5_2:75336543-75336562 | None:intergenic | 35.0% | |
| GTTAGGATTCTTAGTTATGC+TGG | + | chr5_2:75336561-75336580 | Msa0788540:CDS | 35.0% | |
| AGCAAAATCTTGACTCAATC+AGG | + | chr5_2:75336588-75336607 | Msa0788540:CDS | 35.0% | |
| !! | CAATAAGGATAGCTTTGTGT+GGG | + | chr5_2:75336760-75336779 | Msa0788540:CDS | 35.0% |
| ! | TGCTTGATTTGAATAAAGGG+TGG | + | chr5_2:75337102-75337121 | Msa0788540:intron | 35.0% |
| ! | GCTTGATTTGAATAAAGGGT+GGG | + | chr5_2:75337103-75337122 | Msa0788540:intron | 35.0% |
| ! | CTTGATTTGAATAAAGGGTG+GGG | + | chr5_2:75337104-75337123 | Msa0788540:intron | 35.0% |
| TAGATTGGACCTATTACATG+CGG | + | chr5_2:75337437-75337456 | Msa0788540:CDS | 35.0% | |
| TATAGGCAGTGCTCTTTATT+TGG | + | chr5_2:75337842-75337861 | Msa0788540:three_prime_UTR | 35.0% | |
| ! | GAAATAACATTGTCTAGGAC+AGG | - | chr5_2:75336084-75336103 | None:intergenic | 35.0% |
| TGACAACTTGGAAACATGAT+AGG | - | chr5_2:75336147-75336166 | None:intergenic | 35.0% | |
| ATGTTTCCAAGTTGTCAACT+TGG | + | chr5_2:75336150-75336169 | Msa0788540:five_prime_UTR | 35.0% | |
| ATCCATTCAAAATAGCCATG+TGG | + | chr5_2:75336353-75336372 | Msa0788540:CDS | 35.0% | |
| !! | TTCCACATGGCTATTTTGAA+TGG | - | chr5_2:75336358-75336377 | None:intergenic | 35.0% |
| !! | GATATGAAGGCATTTATCAG+TGG | + | chr5_2:75336455-75336474 | Msa0788540:intron | 35.0% |
| TTATCAGTGGAAAAGAACTG+TGG | + | chr5_2:75336468-75336487 | Msa0788540:CDS | 35.0% | |
| !!! | GTGATTGTTTTGGACATTTC+TGG | - | chr5_2:75336513-75336532 | None:intergenic | 35.0% |
| ! | AGGATTGTGTGTGATTGTTT+TGG | - | chr5_2:75336523-75336542 | None:intergenic | 35.0% |
| ACTATGAAAGATGCAATTGG+AGG | - | chr5_2:75336543-75336562 | None:intergenic | 35.0% | |
| GTTAGGATTCTTAGTTATGC+TGG | + | chr5_2:75336561-75336580 | Msa0788540:CDS | 35.0% | |
| AGCAAAATCTTGACTCAATC+AGG | + | chr5_2:75336588-75336607 | Msa0788540:CDS | 35.0% | |
| !! | CAATAAGGATAGCTTTGTGT+GGG | + | chr5_2:75336760-75336779 | Msa0788540:CDS | 35.0% |
| ! | TGCTTGATTTGAATAAAGGG+TGG | + | chr5_2:75337102-75337121 | Msa0788540:intron | 35.0% |
| ! | GCTTGATTTGAATAAAGGGT+GGG | + | chr5_2:75337103-75337122 | Msa0788540:intron | 35.0% |
| ! | CTTGATTTGAATAAAGGGTG+GGG | + | chr5_2:75337104-75337123 | Msa0788540:intron | 35.0% |
| TAGATTGGACCTATTACATG+CGG | + | chr5_2:75337437-75337456 | Msa0788540:CDS | 35.0% | |
| TATAGGCAGTGCTCTTTATT+TGG | + | chr5_2:75337842-75337861 | Msa0788540:three_prime_UTR | 35.0% | |
| ! | CACAATCCAAGTTGACAACT+TGG | - | chr5_2:75336159-75336178 | None:intergenic | 40.0% |
| AGTTGTCAACTTGGATTGTG+AGG | + | chr5_2:75336159-75336178 | Msa0788540:five_prime_UTR | 40.0% | |
| CCATTGAACTAGACGATTCA+TGG | - | chr5_2:75336293-75336312 | None:intergenic | 40.0% | |
| ! | CCATGAATCGTCTAGTTCAA+TGG | + | chr5_2:75336290-75336309 | Msa0788540:CDS | 40.0% |
| TCAAAATAGCCATGTGGAAC+TGG | + | chr5_2:75336359-75336378 | Msa0788540:CDS | 40.0% | |
| TTGACTTTACCAGTTCCACA+TGG | - | chr5_2:75336371-75336390 | None:intergenic | 40.0% | |
| !! | GCAATAAGGATAGCTTTGTG+TGG | + | chr5_2:75336759-75336778 | Msa0788540:CDS | 40.0% |
| ATTTCTGAGTCAGTACCACA+TGG | - | chr5_2:75336900-75336919 | None:intergenic | 40.0% | |
| GCTTGCTCTATTTGGTCTAA+TGG | + | chr5_2:75337129-75337148 | Msa0788540:CDS | 40.0% | |
| CATTCGACCAAAGGATTCAA+GGG | - | chr5_2:75337184-75337203 | None:intergenic | 40.0% | |
| TCATTCGACCAAAGGATTCA+AGG | - | chr5_2:75337185-75337204 | None:intergenic | 40.0% | |
| GAATCCTTTGGTCGAATGAT+AGG | + | chr5_2:75337186-75337205 | Msa0788540:CDS | 40.0% | |
| TTCTCCTATCATTCGACCAA+AGG | - | chr5_2:75337193-75337212 | None:intergenic | 40.0% | |
| ACAATCAACGTCAATTCCGA+AGG | + | chr5_2:75337231-75337250 | Msa0788540:CDS | 40.0% | |
| ATGAGCTCTTATGCTTCCTT+CGG | - | chr5_2:75337250-75337269 | None:intergenic | 40.0% | |
| GAAAACATGCTGTCAAACAC+AGG | - | chr5_2:75337297-75337316 | None:intergenic | 40.0% | |
| TGACATGTCGGTGATGTTTA+TGG | - | chr5_2:75337349-75337368 | None:intergenic | 40.0% | |
| ! | CACATTAGAGTGCTAAACAC+AGG | - | chr5_2:75337875-75337894 | None:intergenic | 40.0% |
| ! | CACAATCCAAGTTGACAACT+TGG | - | chr5_2:75336159-75336178 | None:intergenic | 40.0% |
| AGTTGTCAACTTGGATTGTG+AGG | + | chr5_2:75336159-75336178 | Msa0788540:five_prime_UTR | 40.0% | |
| CCATTGAACTAGACGATTCA+TGG | - | chr5_2:75336293-75336312 | None:intergenic | 40.0% | |
| ! | CCATGAATCGTCTAGTTCAA+TGG | + | chr5_2:75336290-75336309 | Msa0788540:CDS | 40.0% |
| TCAAAATAGCCATGTGGAAC+TGG | + | chr5_2:75336359-75336378 | Msa0788540:CDS | 40.0% | |
| TTGACTTTACCAGTTCCACA+TGG | - | chr5_2:75336371-75336390 | None:intergenic | 40.0% | |
| !! | GCAATAAGGATAGCTTTGTG+TGG | + | chr5_2:75336759-75336778 | Msa0788540:CDS | 40.0% |
| ATTTCTGAGTCAGTACCACA+TGG | - | chr5_2:75336900-75336919 | None:intergenic | 40.0% | |
| GCTTGCTCTATTTGGTCTAA+TGG | + | chr5_2:75337129-75337148 | Msa0788540:CDS | 40.0% | |
| CATTCGACCAAAGGATTCAA+GGG | - | chr5_2:75337184-75337203 | None:intergenic | 40.0% | |
| TCATTCGACCAAAGGATTCA+AGG | - | chr5_2:75337185-75337204 | None:intergenic | 40.0% | |
| GAATCCTTTGGTCGAATGAT+AGG | + | chr5_2:75337186-75337205 | Msa0788540:CDS | 40.0% | |
| TTCTCCTATCATTCGACCAA+AGG | - | chr5_2:75337193-75337212 | None:intergenic | 40.0% | |
| ACAATCAACGTCAATTCCGA+AGG | + | chr5_2:75337231-75337250 | Msa0788540:CDS | 40.0% | |
| ATGAGCTCTTATGCTTCCTT+CGG | - | chr5_2:75337250-75337269 | None:intergenic | 40.0% | |
| GAAAACATGCTGTCAAACAC+AGG | - | chr5_2:75337297-75337316 | None:intergenic | 40.0% | |
| TGACATGTCGGTGATGTTTA+TGG | - | chr5_2:75337349-75337368 | None:intergenic | 40.0% | |
| ! | CACATTAGAGTGCTAAACAC+AGG | - | chr5_2:75337875-75337894 | None:intergenic | 40.0% |
| !! | GATAGCTTTGTGTGGGAGAT+TGG | + | chr5_2:75336767-75336786 | Msa0788540:CDS | 45.0% |
| GAGATTGGAGTTCCATTACC+TGG | + | chr5_2:75336782-75336801 | Msa0788540:CDS | 45.0% | |
| GTCAAACACAGGTGATTGTG+AGG | - | chr5_2:75337286-75337305 | None:intergenic | 45.0% | |
| ACTTGTCAGCCGCATGTAAT+AGG | - | chr5_2:75337449-75337468 | None:intergenic | 45.0% | |
| !! | GATAGCTTTGTGTGGGAGAT+TGG | + | chr5_2:75336767-75336786 | Msa0788540:CDS | 45.0% |
| GAGATTGGAGTTCCATTACC+TGG | + | chr5_2:75336782-75336801 | Msa0788540:CDS | 45.0% | |
| GTCAAACACAGGTGATTGTG+AGG | - | chr5_2:75337286-75337305 | None:intergenic | 45.0% | |
| ACTTGTCAGCCGCATGTAAT+AGG | - | chr5_2:75337449-75337468 | None:intergenic | 45.0% | |
| ! | GTGGGGAAGCTTGCTCTATT+TGG | + | chr5_2:75337121-75337140 | Msa0788540:CDS | 50.0% |
| ! | GTGGGGAAGCTTGCTCTATT+TGG | + | chr5_2:75337121-75337140 | Msa0788540:CDS | 50.0% |
| GCAGCAGCCCTTGAATCCTT+TGG | + | chr5_2:75337174-75337193 | Msa0788540:CDS | 55.0% | |
| GCAGCAGCCCTTGAATCCTT+TGG | + | chr5_2:75337174-75337193 | Msa0788540:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 75336062 | 75337922 | 75336062 | ID=Msa0788540;Name=Msa0788540 |
| chr5_2 | mRNA | 75336062 | 75337922 | 75336062 | ID=Msa0788540-mRNA-1;Parent=Msa0788540;Name=Msa0788540-mRNA-1;_AED=0.11;_eAED=0.11;_QI=200|1|1|1|1|1|4|200|328 |
| chr5_2 | exon | 75336062 | 75336380 | 75336062 | ID=Msa0788540-mRNA-1:exon:22987;Parent=Msa0788540-mRNA-1 |
| chr5_2 | exon | 75336464 | 75336609 | 75336464 | ID=Msa0788540-mRNA-1:exon:22988;Parent=Msa0788540-mRNA-1 |
| chr5_2 | exon | 75336738 | 75336856 | 75336738 | ID=Msa0788540-mRNA-1:exon:22989;Parent=Msa0788540-mRNA-1 |
| chr5_2 | exon | 75337120 | 75337922 | 75337120 | ID=Msa0788540-mRNA-1:exon:22990;Parent=Msa0788540-mRNA-1 |
| chr5_2 | five_prime_UTR | 75336062 | 75336261 | 75336062 | ID=Msa0788540-mRNA-1:five_prime_utr;Parent=Msa0788540-mRNA-1 |
| chr5_2 | CDS | 75336262 | 75336380 | 75336262 | ID=Msa0788540-mRNA-1:cds;Parent=Msa0788540-mRNA-1 |
| chr5_2 | CDS | 75336464 | 75336609 | 75336464 | ID=Msa0788540-mRNA-1:cds;Parent=Msa0788540-mRNA-1 |
| chr5_2 | CDS | 75336738 | 75336856 | 75336738 | ID=Msa0788540-mRNA-1:cds;Parent=Msa0788540-mRNA-1 |
| chr5_2 | CDS | 75337120 | 75337722 | 75337120 | ID=Msa0788540-mRNA-1:cds;Parent=Msa0788540-mRNA-1 |
| chr5_2 | three_prime_UTR | 75337723 | 75337922 | 75337723 | ID=Msa0788540-mRNA-1:three_prime_utr;Parent=Msa0788540-mRNA-1 |
| Gene Sequence |
| Protein sequence |
