AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0133630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0133630 MtrunA17_Chr1g0203191 97.854 233 5 0 1 233 1 233 1.16e-161 471
Msa0133630 MtrunA17_Chr1g0203201 64.626 441 104 8 230 667 1 392 1.22e-143 431
Msa0133630 MtrunA17_Chr1g0203211 97.810 137 3 0 734 870 25 161 1.55e-90 283
Msa0133630 MtrunA17_Chr5g0397641 83.088 136 23 0 735 870 2 137 8.12e-73 235
Msa0133630 MtrunA17_Chr8g0386651 78.676 136 29 0 735 870 2 137 1.29e-68 223
Msa0133630 MtrunA17_Chr1g0182501 74.453 137 33 1 735 869 2 138 6.40e-68 221
Msa0133630 MtrunA17_Chr2g0291571 71.533 137 37 1 735 869 2 138 1.94e-65 215
Msa0133630 MtrunA17_Chr8g0380291 70.073 137 39 1 735 869 2 138 4.59e-64 211
Msa0133630 MtrunA17_Chr7g0261251 60.294 136 52 1 736 869 10 145 9.91e-56 188
Msa0133630 MtrunA17_Chr4g0037251 59.259 135 53 1 737 869 8 142 1.79e-51 176
Msa0133630 MtrunA17_Chr1g0187771 54.745 137 60 1 735 869 10 146 3.01e-48 167
Msa0133630 MtrunA17_Chr3g0145151 30.573 157 76 6 69 201 53 200 2.14e-11 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0133630 AT5G52380.1 57.249 269 87 9 1 261 1 249 7.81e-82 264
Msa0133630 AT4G25590.1 84.559 136 21 0 735 870 2 137 5.58e-74 238
Msa0133630 AT4G25590.2 83.846 130 21 0 741 870 1 130 7.69e-73 235
Msa0133630 AT1G01750.2 77.143 140 30 1 732 869 4 143 6.93e-71 230
Msa0133630 AT1G01750.1 78.832 137 27 1 735 869 2 138 8.67e-71 230
Msa0133630 AT5G52360.1 82.353 136 24 0 735 870 2 137 1.16e-70 229
Msa0133630 AT3G46010.2 75.362 138 32 1 734 869 12 149 3.08e-70 229
Msa0133630 AT3G46010.1 75.912 137 31 1 735 869 2 138 6.02e-70 228
Msa0133630 AT4G00680.1 77.206 136 29 1 735 868 2 137 3.67e-69 225
Msa0133630 AT3G46000.1 74.627 134 34 0 735 868 2 135 4.95e-69 225
Msa0133630 AT4G00680.2 75.540 139 32 1 732 868 9 147 5.66e-69 225
Msa0133630 AT3G46000.2 74.074 135 35 0 734 868 20 154 1.02e-68 225
Msa0133630 AT5G59890.1 74.453 137 33 1 735 869 2 138 2.26e-68 223
Msa0133630 AT3G46000.3 73.438 128 34 0 741 868 1 128 1.48e-64 213
Msa0133630 AT5G59890.3 73.282 131 33 1 741 869 1 131 5.68e-64 211
Msa0133630 AT5G59890.2 73.282 131 33 1 741 869 1 131 5.68e-64 211
Msa0133630 AT5G59880.1 67.883 137 42 1 735 869 2 138 4.54e-63 209
Msa0133630 AT5G59880.2 59.124 137 39 2 735 869 2 123 3.19e-50 172
Msa0133630 AT2G31200.1 55.882 136 58 1 736 869 10 145 4.21e-49 170
Msa0133630 AT2G16700.1 57.778 135 55 1 737 869 8 142 1.22e-48 169
Msa0133630 AT2G16700.4 58.015 131 53 1 741 869 1 131 1.03e-46 163
Msa0133630 AT2G16700.2 58.015 131 53 1 741 869 1 131 1.03e-46 163
Msa0133630 AT4G34970.1 52.593 135 62 1 737 869 6 140 1.40e-44 157
Msa0133630 AT3G45990.1 54.815 135 50 3 741 868 1 131 6.42e-41 147
Msa0133630 AT2G16700.3 56.322 87 36 1 737 821 8 94 3.60e-29 112
Msa0133630 AT4G36020.2 31.293 147 78 5 69 196 102 244 1.14e-13 72.8
Msa0133630 AT4G36020.2 34.532 139 74 5 94 215 102 240 2.95e-11 65.5
Msa0133630 AT1G75560.2 30.233 129 66 5 69 196 95 200 6.72e-11 64.3
Msa0133630 AT1G75560.1 30.233 129 66 5 69 196 95 200 6.72e-11 64.3

Find 193 sgRNAs with CRISPR-Local

Find 1088 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGAGTGGGTTCGACTTT+GGG 0.224023 1_3:-64963666 None:intergenic
TCGACTTTGGGGAAGAGTTC+GGG 0.239137 1_3:-64963654 None:intergenic
CATACCTGAGGCTGAGGATT+AGG 0.247669 1_3:-64972791 None:intergenic
GTCTGTAGAGGGTTCGTTCT+TGG 0.254807 1_3:-64973374 None:intergenic
ATCATCTCCACTCACAAATT+TGG 0.261147 1_3:-64966835 None:intergenic
ATCTTCTGTTCTGCAACTAT+TGG 0.266246 1_3:-64973655 None:intergenic
TCTGTTGAGGGTTCTGTTAT+CGG 0.268701 1_3:-64973598 None:intergenic
AATCCATTCTGCCCTTTATC+AGG 0.270723 1_3:-64964241 None:intergenic
CCATTATTTGTAGGGGTTGC+CGG 0.277671 1_3:+64976459 Msa0133630:intron
TCTTAGCGAGTCGTTGTCTT+TGG 0.285308 1_3:-64963611 None:intergenic
TCTTCTGTTCTGCAACTATT+GGG 0.288525 1_3:-64973654 None:intergenic
GCAAGGGATTGTCCTGATAA+AGG 0.290152 1_3:+64964229 Msa0133630:CDS
CCTAGCTCTAACGCAGGTTT+TGG 0.295538 1_3:-64972965 None:intergenic
GGTTTCAAGTGTATCGTTCT+TGG 0.298839 1_3:-64973554 None:intergenic
TCTAGCTCTAACGCGGGTTT+TGG 0.303408 1_3:-64973037 None:intergenic
AAGTCCTCATAGGTTTCTTC+TGG 0.304000 1_3:-64978401 None:intergenic
TTCGGTGAAGCAAATGCTTC+TGG 0.304324 1_3:-64972683 None:intergenic
TGTGTTTAAGATTGAGAATC+AGG 0.305840 1_3:+64978352 Msa0133630:CDS
GGATTGGCTGCTGTGAAATT+AGG 0.309175 1_3:-64963574 None:intergenic
TCTAGCTCTAAAGCGGGTTT+TGG 0.321854 1_3:-64973001 None:intergenic
TTCGACTTTGGGGAAGAGTT+CGG 0.328060 1_3:-64963655 None:intergenic
TGGAGAGAGATTTAAGCTTT+TGG 0.333674 1_3:-64974087 None:intergenic
TCTGTGACTATCGGGGTTGC+AGG 0.333808 1_3:-64973421 None:intergenic
TCTGCAACTATTGGGGTTGC+AGG 0.336126 1_3:-64973646 None:intergenic
AGAAGAAGAAGAGGTGTAGA+TGG 0.340074 1_3:+64972738 Msa0133630:CDS
TTGATTTGAGTTCTGAGATT+GGG 0.342748 1_3:-64972838 None:intergenic
CAGTTATGAACAGGCCCTTT+AGG 0.345789 1_3:-64964277 None:intergenic
CTTTGCCCATGTTGATCATT+GGG 0.354628 1_3:-64973784 None:intergenic
TCATCTTCAGTATTCTGTTT+CGG 0.364406 1_3:-64972701 None:intergenic
GATAAAGGGCAGAATGGATT+TGG 0.365948 1_3:+64964244 Msa0133630:CDS
GATTGGGGCAACTACTACTA+AGG 0.375645 1_3:-64972822 None:intergenic
GCGGGGATATTATTTGAATC+AGG 0.376338 1_3:-64972881 None:intergenic
AGAATAGGAAGAACAGGAAT+AGG 0.379547 1_3:+64972909 Msa0133630:CDS
ATACCTGAGGCTGAGGATTA+GGG 0.380171 1_3:-64972790 None:intergenic
TGGTGGAGTGGGTTCGACTT+TGG 0.381519 1_3:-64963667 None:intergenic
TTTGGATCATGGCAATTTCC+AGG 0.382234 1_3:-64975538 None:intergenic
GCATTGTTGTATGGTGTGAT+TGG 0.384014 1_3:-64974065 None:intergenic
TCAACATGGGCAAAGTTCTA+TGG 0.387014 1_3:+64973792 Msa0133630:CDS
CGGGGTTTGGAGTTTGAGTC+GGG 0.387157 1_3:-64963735 None:intergenic
CTGTTCAATATTATGCTCAT+TGG 0.390104 1_3:-64973146 None:intergenic
CTTCCAGATCTGTGACTATC+GGG 0.391139 1_3:-64973429 None:intergenic
ACATGTAAGCTTAGATGAAC+TGG 0.391509 1_3:+64973246 Msa0133630:CDS
AGAAACACAAGAAGAGGAAA+AGG 0.395125 1_3:+64973686 Msa0133630:CDS
ACTTTGCCCATGTTGATCAT+TGG 0.399619 1_3:-64973785 None:intergenic
TGTCTCACCTTTGATATATC+CGG 0.399831 1_3:-64979097 None:intergenic
TAACTGTCCTCATCCTCTTC+AGG 0.400967 1_3:+64963992 Msa0133630:CDS
CGACGAAAGGCCCAGTGGTC+AGG 0.404316 1_3:+64966809 Msa0133630:CDS
ATTTGTGAGTGGAGATGATA+TGG 0.409360 1_3:+64966839 Msa0133630:CDS
ATTATAATACCTTTGGATCA+TGG 0.411189 1_3:-64975549 None:intergenic
TTTGATTTGAGTTCTGAGAT+TGG 0.411352 1_3:-64972839 None:intergenic
TTCCCTCTTGAATCTGTCCT+TGG 0.421769 1_3:-64979140 None:intergenic
ACTCTGCAACAGTTCCTTTG+CGG 0.427865 1_3:-64963537 None:intergenic
TGTTATAATTGTGGTGATAA+TGG 0.431238 1_3:+64963957 Msa0133630:CDS
GAAGCAAACTTCCTCATCCT+TGG 0.432600 1_3:-64974107 None:intergenic
CTGTTGAGGGTTCTGTTATC+GGG 0.434581 1_3:-64973597 None:intergenic
AACAGACCCGGCTGTTGTAA+TGG 0.439053 1_3:+64973615 Msa0133630:CDS
AATTGCTGAAACCTCAGTTC+AGG 0.440642 1_3:+64973732 Msa0133630:CDS
TACAGACCCGTCTGTTGTAA+TGG 0.441771 1_3:+64973390 Msa0133630:CDS
GGTCAAAAGGTCTCTGAGCT+AGG 0.451406 1_3:-64973576 None:intergenic
AAAAGAATAAGATATGTTTA+CGG 0.452361 1_3:+64963868 Msa0133630:CDS
CAAGGGATTGTCCTGATAAA+GGG 0.454541 1_3:+64964230 Msa0133630:CDS
CAATGAGCATAATATTGAAC+AGG 0.457594 1_3:+64973147 Msa0133630:CDS
TCAAACTCCAAACCCCGAAC+CGG 0.458756 1_3:+64963741 Msa0133630:CDS
AGGAAGAAAAGAAAACCCTT+TGG 0.460736 1_3:+64963485 Msa0133630:five_prime_UTR
TCTTCCAGATCTGTGACTAT+CGG 0.462394 1_3:-64973430 None:intergenic
TTTAAGTATTGTTATAATTG+TGG 0.465048 1_3:+64963948 Msa0133630:CDS
AAGGTGAAGTCAAAACTAAC+GGG 0.466112 1_3:+64973521 Msa0133630:CDS
CAAATATAACAGCTCTCGCC+GGG 0.467271 1_3:-64963795 None:intergenic
TTTGGTGATGGTCGTCCTAA+AGG 0.469250 1_3:+64964262 Msa0133630:CDS
ACCTCAGTTCAGGGAACTAA+AGG 0.472859 1_3:+64973742 Msa0133630:CDS
GGGGAAATCGGGCACTCACT+TGG 0.475469 1_3:+64974136 Msa0133630:CDS
CTCTCGCCGGGTTTCATACC+GGG 0.478681 1_3:-64963783 None:intergenic
AGGAAAAGGAAGTGTGAAGT+GGG 0.481383 1_3:+64973700 Msa0133630:CDS
CATACTATTAATTAGGTCTC+CGG 0.481390 1_3:+64979078 Msa0133630:intron
GGTTCTGTTATCGGGTCAAA+AGG 0.484298 1_3:-64973589 None:intergenic
TTGGTGATGGTCGTCCTAAA+GGG 0.491687 1_3:+64964263 Msa0133630:CDS
TACAACAGCCGGGTCTGTTG+AGG 0.491899 1_3:-64973611 None:intergenic
AAATTTGGTAACCTGACCAC+TGG 0.493953 1_3:-64966820 None:intergenic
CTCATCCTCTTCAGGAAGGT+GGG 0.495297 1_3:+64964000 Msa0133630:CDS
CCTCATCCTCTTCAGGAAGG+TGG 0.496782 1_3:+64963999 Msa0133630:CDS
GCTCTCGCCGGGTTTCATAC+CGG 0.497326 1_3:-64963784 None:intergenic
TCGGGGTTTGGAGTTTGAGT+CGG 0.498905 1_3:-64963736 None:intergenic
AGGGTGAAGTCAAAACTAAC+GGG 0.501018 1_3:+64973341 Msa0133630:CDS
CCAAAACCTGCGTTAGAGCT+AGG 0.501048 1_3:+64972965 Msa0133630:CDS
ATTGCTGAAACCTCAGTTCA+GGG 0.501522 1_3:+64973733 Msa0133630:CDS
TCCTGATGGTGGTTCTAAAG+AGG 0.503381 1_3:+64963923 Msa0133630:CDS
CACTTCAGCTATAACTGCCC+TGG 0.503544 1_3:+64975520 Msa0133630:CDS
ACAACAGCCGGGTCTGTTGA+GGG 0.505517 1_3:-64973610 None:intergenic
CTTCTGTTCTGCAACTATTG+GGG 0.509292 1_3:-64973653 None:intergenic
TGCTCATGGCATTTATCCTA+AGG 0.510504 1_3:+64964088 Msa0133630:CDS
ACATGCACTAAAGTCCTCAT+AGG 0.515011 1_3:-64978411 None:intergenic
TACAACAGACGGGTCTGTAG+AGG 0.517197 1_3:-64973386 None:intergenic
GCAAATATAACAGCTCTCGC+CGG 0.518580 1_3:-64963796 None:intergenic
GTATGGTGTGATTGGTCTCT+CGG 0.519281 1_3:-64974057 None:intergenic
TGAGTGTCCATTACAACAGC+CGG 0.522202 1_3:-64973622 None:intergenic
CGAGAGCTGTTATATTTGCA+AGG 0.523884 1_3:+64963800 Msa0133630:CDS
ATGTGGTGGTGTCACACATT+TGG 0.524779 1_3:+64964207 Msa0133630:CDS
TCCTCTTTAGAACCACCATC+AGG 0.530691 1_3:-64963924 None:intergenic
GTGGAGTGGGTTCGACTTTG+GGG 0.534408 1_3:-64963665 None:intergenic
AAGAAGAAGAGCATGATCAA+TGG 0.537123 1_3:+64972935 Msa0133630:CDS
CAAAGAAGAAACACAAGAAG+AGG 0.538255 1_3:+64973680 Msa0133630:CDS
CTGACCACTGGGCCTTTCGT+CGG 0.538617 1_3:-64966808 None:intergenic
ATAAGATATGTTTACGGTGT+CGG 0.539881 1_3:+64963874 Msa0133630:CDS
TGTCCTGATAAAGGGCAGAA+TGG 0.542424 1_3:+64964238 Msa0133630:CDS
TAAGATTGAGAATCAGGAAG+TGG 0.543052 1_3:+64978358 Msa0133630:CDS
CGACTTTGGGGAAGAGTTCG+GGG 0.544948 1_3:-64963653 None:intergenic
TTTCATACCGGGAACACGAA+GGG 0.545029 1_3:-64963772 None:intergenic
GAGGAAAAGGAAGTGTGAAG+TGG 0.547283 1_3:+64973699 Msa0133630:CDS
AAACCCTAATCCTCAGCCTC+AGG 0.549833 1_3:+64972787 Msa0133630:CDS
CGTGTTCCCGGTATGAAACC+CGG 0.552225 1_3:+64963777 Msa0133630:CDS
TCACCACAGCGCAGCCGCAA+AGG 0.554860 1_3:+64963523 Msa0133630:five_prime_UTR
TAAATCTCTCTCCAAGGATG+AGG 0.556241 1_3:+64974096 Msa0133630:CDS
ATAGTCCCACCTTCCTGAAG+AGG 0.557611 1_3:-64964005 None:intergenic
AACCCCGATAGTCACAGATC+TGG 0.557892 1_3:+64973426 Msa0133630:CDS
CCACCTTCCTGAAGAGGATG+AGG 0.558111 1_3:-64963999 None:intergenic
TCCTTTAGTTCCCTGAACTG+AGG 0.558762 1_3:-64973743 None:intergenic
AGATTCAAGAGGGAACTTGA+TGG 0.558974 1_3:+64979148 Msa0133630:CDS
CACAGTTATAGCTTCAGCAC+TGG 0.559300 1_3:-64976501 None:intergenic
GCTGTGAAATTAGGTTTCGA+AGG 0.559950 1_3:-64963565 None:intergenic
TGGAAATTGCCATGATCCAA+AGG 0.561484 1_3:+64975540 Msa0133630:CDS
TCAGAACATACCTGAGGCTG+AGG 0.561500 1_3:-64972797 None:intergenic
CTGTGAAATTAGGTTTCGAA+GGG 0.561699 1_3:-64963564 None:intergenic
CAGGGTGAAGTCAAAACTAA+CGG 0.563128 1_3:+64973340 Msa0133630:CDS
CAAGGTGAAGTCAAAACTAA+CGG 0.563128 1_3:+64973520 Msa0133630:CDS
GCATAACGACACTCATCAGC+AGG 0.564625 1_3:-64978437 None:intergenic
CTGCAACTATTGGGGTTGCA+GGG 0.566486 1_3:-64973645 None:intergenic
AAATGCTCAGTATATATAGC+AGG 0.568557 1_3:+64974160 Msa0133630:CDS
TGATTTGAGTTCTGAGATTG+GGG 0.568614 1_3:-64972837 None:intergenic
TTCTTTCCTAGCTCTAACGC+AGG 0.568946 1_3:-64972971 None:intergenic
AACAGAACCCTCAACAGACC+CGG 0.570135 1_3:+64973603 Msa0133630:CDS
TTGGATCATGGCAATTTCCA+GGG 0.571363 1_3:-64975537 None:intergenic
GTCAAAAGGTCTCTGAGCTA+GGG 0.572141 1_3:-64973575 None:intergenic
GCGATTGCTTTGTCAATCAG+AGG 0.572700 1_3:-64973211 None:intergenic
GTTCCTTTGCGGCTGCGCTG+TGG 0.574018 1_3:-64963526 None:intergenic
ATCAAAGGTGAGACATAAGA+TGG 0.575725 1_3:+64979105 Msa0133630:CDS
GGCTAACGCAGCATCTGGAA+TGG 0.577657 1_3:+64978265 Msa0133630:intron
AAAAGAAGGAGTACATGGAG+AGG 0.583802 1_3:+64973308 Msa0133630:CDS
AAAAGAAGGAGTACATGGAG+AGG 0.583802 1_3:+64973488 Msa0133630:CDS
CGAGCTCAGAATTGTCCTGA+TGG 0.583952 1_3:+64963909 Msa0133630:CDS
GAGAGCTGTTATATTTGCAA+GGG 0.584019 1_3:+64963801 Msa0133630:CDS
CTGTGACTATCGGGGTTGCA+GGG 0.584646 1_3:-64973420 None:intergenic
TTCATACCGGGAACACGAAG+GGG 0.585125 1_3:-64963771 None:intergenic
GGTGGTTGTTGTAAAATATG+TGG 0.591747 1_3:+64964190 Msa0133630:CDS
GAGTGTCCATTACAACAGCC+GGG 0.592789 1_3:-64973621 None:intergenic
GCCGGTGGAAGCTGAAAGCA+TGG 0.598653 1_3:+64976477 Msa0133630:CDS
ATGAGACGAAACAAATCCAA+AGG 0.600556 1_3:-64963501 None:intergenic
ATATCAAAGCTCATTTCACT+AGG 0.602593 1_3:-64979199 None:intergenic
TGAGTGTCCATTACAACAGA+CGG 0.604973 1_3:-64973397 None:intergenic
TATTGAACAGGCTGAAACTG+CGG 0.605553 1_3:+64973159 Msa0133630:CDS
AATTTGGTAACCTGACCACT+GGG 0.605731 1_3:-64966819 None:intergenic
ACTCTAATAAAATCCCCTTG+TGG 0.606279 1_3:-64975105 None:intergenic
ACCATGCTTTCAGCTTCCAC+CGG 0.607268 1_3:-64976478 None:intergenic
AAAGCTTAAATCTCTCTCCA+AGG 0.608046 1_3:+64974090 Msa0133630:CDS
CAGGTTACCAAATTTGTGAG+TGG 0.610157 1_3:+64966828 Msa0133630:CDS
TGGTGTCACACATTTGGCAA+GGG 0.611414 1_3:+64964213 Msa0133630:CDS
ACAACAGACGGGTCTGTAGA+GGG 0.614192 1_3:-64973385 None:intergenic
GGGCAGAATGGATTTGGTGA+TGG 0.617552 1_3:+64964250 Msa0133630:CDS
TAGGTCTCCGGATATATCAA+AGG 0.618274 1_3:+64979090 Msa0133630:intron
GTGGTACTAGAGAAACTTGG+AGG 0.618555 1_3:+64978377 Msa0133630:CDS
AAGAGGCTACTTCCTCCACA+AGG 0.618768 1_3:+64975090 Msa0133630:CDS
GCTCAGAATTGTCCTGATGG+TGG 0.621388 1_3:+64963912 Msa0133630:CDS
GAGTGTCCATTACAACAGAC+GGG 0.621887 1_3:-64973396 None:intergenic
TGAGACGAAACAAATCCAAA+GGG 0.622656 1_3:-64963500 None:intergenic
CTAATAAAATCCCCTTGTGG+AGG 0.623850 1_3:-64975102 None:intergenic
GTTTCATACCGGGAACACGA+AGG 0.624627 1_3:-64963773 None:intergenic
CAGGTGGAGGAAGACTTGCT+AGG 0.628523 1_3:+64975473 Msa0133630:intron
GTGGTGTCACACATTTGGCA+AGG 0.630294 1_3:+64964212 Msa0133630:CDS
ATTGGGGCAACTACTACTAA+GGG 0.631412 1_3:-64972821 None:intergenic
AGAGGCTACTTCCTCCACAA+GGG 0.633904 1_3:+64975091 Msa0133630:CDS
AATGCTCCCAATGATCAACA+TGG 0.634265 1_3:+64973778 Msa0133630:CDS
GCTTAGATGAACTGGAAGAG+AGG 0.636112 1_3:+64973254 Msa0133630:CDS
GAAGTGGTACTAGAGAAACT+TGG 0.638480 1_3:+64978374 Msa0133630:CDS
GAGGACAGAATTTAGCGATG+TGG 0.640619 1_3:-64963830 None:intergenic
TGTCCTCATCCTCTTCAGGA+AGG 0.641819 1_3:+64963996 Msa0133630:CDS
TCTGATTGACAAAGCAATCG+CGG 0.647479 1_3:+64973213 Msa0133630:CDS
GAGGCTACTTCCTCCACAAG+GGG 0.649772 1_3:+64975092 Msa0133630:CDS
TTATTTGTAGGGGTTGCCGG+TGG 0.656187 1_3:+64976462 Msa0133630:intron
TTCCAGATCTGTGACTATCG+GGG 0.656228 1_3:-64973428 None:intergenic
CAGTACTGAGAACCGACGAA+AGG 0.657154 1_3:+64966796 Msa0133630:intron
TCATACCGGGAACACGAAGG+GGG 0.658374 1_3:-64963770 None:intergenic
CACCAAGGACAGATTCAAGA+GGG 0.658439 1_3:+64979138 Msa0133630:CDS
GGTTGTTGTAAAATATGTGG+TGG 0.661549 1_3:+64964193 Msa0133630:CDS
ATGCTCCCAATGATCAACAT+GGG 0.667784 1_3:+64973779 Msa0133630:CDS
AGGTCCAGAAGAAACCTATG+AGG 0.672047 1_3:+64978397 Msa0133630:CDS
TAGTCACAGATCTGGAAGAG+AGG 0.672575 1_3:+64973434 Msa0133630:CDS
TGTTTACGGTGTCGGCGTCG+CGG 0.675579 1_3:+64963882 Msa0133630:CDS
GCACCAAGGACAGATTCAAG+AGG 0.681401 1_3:+64979137 Msa0133630:CDS
GATGGTCTATGCTAGCACCA+AGG 0.722814 1_3:+64979123 Msa0133630:CDS
TGAAGTCAAAACTAACGGGG+AGG 0.734476 1_3:+64973345 Msa0133630:CDS
AGGTGAAGTCAAAACTAACG+GGG 0.734956 1_3:+64973522 Msa0133630:CDS
AAGGGTTCAGAACATACCTG+AGG 0.737732 1_3:-64972803 None:intergenic
GGGTGAAGTCAAAACTAACG+GGG 0.754407 1_3:+64973342 Msa0133630:CDS
AGAACCGACGAAAGGCCCAG+TGG 0.755650 1_3:+64966804 Msa0133630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTAAATTAAATCAAGA+AGG - chr1_3:64966249-64966268 None:intergenic 10.0%
!! ATATAAATCAAATAAAAGTA+GGG - chr1_3:64967407-64967426 None:intergenic 10.0%
!! AAAGTTTATACTTAAAAAAT+TGG + chr1_3:64968659-64968678 Msa0133630:intron 10.0%
!! AAGTTTATACTTAAAAAATT+GGG + chr1_3:64968660-64968679 Msa0133630:intron 10.0%
!! GAAAAATTTGTATATTTATA+GGG - chr1_3:64968703-64968722 None:intergenic 10.0%
!! TGAAAAATTTGTATATTTAT+AGG - chr1_3:64968704-64968723 None:intergenic 10.0%
!! CTAAAATTAACTTAAAAATA+GGG - chr1_3:64968794-64968813 None:intergenic 10.0%
!! ACTAAAATTAACTTAAAAAT+AGG - chr1_3:64968795-64968814 None:intergenic 10.0%
!!! ATGAATTTTTACATTTTTTA+TGG - chr1_3:64968924-64968943 None:intergenic 10.0%
!!! TTAAAAAATTCCAAATTTTT+TGG + chr1_3:64968961-64968980 Msa0133630:intron 10.0%
!!! TAAAAAATTCCAAATTTTTT+GGG + chr1_3:64968962-64968981 Msa0133630:intron 10.0%
!!! TGTAAATATGTAATTTTTTA+GGG - chr1_3:64969182-64969201 None:intergenic 10.0%
!!! ATGTAAATATGTAATTTTTT+AGG - chr1_3:64969183-64969202 None:intergenic 10.0%
!! AAAAAAAACTAAGTAAAAAA+TGG + chr1_3:64969946-64969965 Msa0133630:intron 10.0%
!!! ATTTGATTTTTAGAATTTTT+TGG - chr1_3:64970014-64970033 None:intergenic 10.0%
!!! AAAACTAATGAAATTTTTTT+TGG + chr1_3:64970034-64970053 Msa0133630:intron 10.0%
!! AAAATGAAAAAAATGAAAAA+TGG + chr1_3:64970075-64970094 Msa0133630:intron 10.0%
!! AAATGAAAAAAATGAAAAAT+GGG + chr1_3:64970076-64970095 Msa0133630:intron 10.0%
!!! CAAAAGTTTTTTTTTTTTTA+TGG - chr1_3:64972402-64972421 None:intergenic 10.0%
!! ATTTAAAGAAAAAAATATGA+AGG + chr1_3:64976967-64976986 Msa0133630:intron 10.0%
!!! AAATTTATTTCTTTCAAAAA+AGG - chr1_3:64977066-64977085 None:intergenic 10.0%
!!! TTTTTGAAAGAAATAAATTT+TGG + chr1_3:64977066-64977085 Msa0133630:intron 10.0%
!!! TTTTTTTCAAAAATGTTTTT+AGG + chr1_3:64978244-64978263 Msa0133630:intron 10.0%
!! ATAAAAAAGTTATATTAGAT+AGG + chr1_3:64978998-64979017 Msa0133630:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:64964997-64965016 Msa0133630:intron 100.0%
!! AAAAGAATAAGATATGTTTA+CGG + chr1_3:64963868-64963887 Msa0133630:CDS 15.0%
!!! TTTAAGTATTGTTATAATTG+TGG + chr1_3:64963948-64963967 Msa0133630:CDS 15.0%
!! ATGTTATTATTTAACTATGT+TGG + chr1_3:64964129-64964148 Msa0133630:intron 15.0%
!!! AATTTTGTATTAATTTGTTG+AGG + chr1_3:64965043-64965062 Msa0133630:intron 15.0%
!!! ATTTTGTATTAATTTGTTGA+GGG + chr1_3:64965044-64965063 Msa0133630:intron 15.0%
!! CAAAGTACAAAAAAAATAAA+GGG - chr1_3:64965345-64965364 None:intergenic 15.0%
!! TATAATTCATTACAATGAAT+CGG - chr1_3:64965677-64965696 None:intergenic 15.0%
!! TGACAAAAAAAAAAAATAGT+TGG - chr1_3:64965724-64965743 None:intergenic 15.0%
!!! TTTTATCAAATTTGTTTAAC+TGG + chr1_3:64966290-64966309 Msa0133630:intron 15.0%
!!! AACTAAATGTAACTATTTTA+TGG + chr1_3:64967360-64967379 Msa0133630:intron 15.0%
!!! ACTAAATGTAACTATTTTAT+GGG + chr1_3:64967361-64967380 Msa0133630:intron 15.0%
!! CATATAAATCAAATAAAAGT+AGG - chr1_3:64967408-64967427 None:intergenic 15.0%
!!! CTACTTTTATTTGATTTATA+TGG + chr1_3:64967406-64967425 Msa0133630:intron 15.0%
!! AGAGAAAAAAAATTATAATG+CGG - chr1_3:64967574-64967593 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr1_3:64967630-64967649 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr1_3:64967733-64967752 None:intergenic 15.0%
!!! ATAAGCAAATTTAACTTTTT+AGG - chr1_3:64967867-64967886 None:intergenic 15.0%
!!! AGTTAAATTTGCTTATATTT+AGG + chr1_3:64967871-64967890 Msa0133630:intron 15.0%
!!! TAGTGATTGAAAATTTTATA+GGG - chr1_3:64968763-64968782 None:intergenic 15.0%
!!! CTTACAACTTATATATTTTT+AGG - chr1_3:64969360-64969379 None:intergenic 15.0%
!!! TATTTTATTTTTACCATTCA+TGG + chr1_3:64973852-64973871 Msa0133630:intron 15.0%
!! ATATAATATATTGCAATTCA+CGG + chr1_3:64974810-64974829 Msa0133630:intron 15.0%
!! ATAATAGATTATAATACCTT+TGG - chr1_3:64975559-64975578 None:intergenic 15.0%
!! AGGTATTATAATCTATTATT+TGG + chr1_3:64975560-64975579 Msa0133630:intron 15.0%
!! GGTATTATAATCTATTATTT+GGG + chr1_3:64975561-64975580 Msa0133630:intron 15.0%
!! GTATTATAATCTATTATTTG+GGG + chr1_3:64975562-64975581 Msa0133630:intron 15.0%
!!! TATTTCAATCTTTTCAAAAA+AGG - chr1_3:64976627-64976646 None:intergenic 15.0%
!!! AATATGAAGGTATTTATATT+TGG + chr1_3:64976980-64976999 Msa0133630:intron 15.0%
!!! AAATCACTTGTTATTTTTAA+GGG - chr1_3:64977155-64977174 None:intergenic 15.0%
!!! TAAATCACTTGTTATTTTTA+AGG - chr1_3:64977156-64977175 None:intergenic 15.0%
!!! ACACAATTTAATTTTTGATT+TGG - chr1_3:64977724-64977743 None:intergenic 15.0%
!! TTGTTTGTTTATAATACAAT+TGG + chr1_3:64977873-64977892 Msa0133630:intron 15.0%
!!! AATTTGATATTTTCTTGTTT+TGG + chr1_3:64977904-64977923 Msa0133630:intron 15.0%
!! AAAAAGCAAAATAATAGATT+TGG - chr1_3:64978838-64978857 None:intergenic 15.0%
!!! TGTTTTTCTTCTTTTTTGAT+GGG - chr1_3:64963698-64963717 None:intergenic 20.0%
!!! TTGTTTTTCTTCTTTTTTGA+TGG - chr1_3:64963699-64963718 None:intergenic 20.0%
!! ATTTATCCTAAGGTATATAT+TGG + chr1_3:64964098-64964117 Msa0133630:intron 20.0%
!!! ATAGTTGTTGTTTATATCAT+AGG + chr1_3:64964168-64964187 Msa0133630:intron 20.0%
!!! TAGTTGTTGTTTATATCATA+GGG + chr1_3:64964169-64964188 Msa0133630:intron 20.0%
!!! ATATCAGTGTTATTAATTAG+TGG + chr1_3:64964747-64964766 Msa0133630:intron 20.0%
!! AATTGAACAATAAAACATGT+GGG - chr1_3:64965113-64965132 None:intergenic 20.0%
!! GCAAAGTACAAAAAAAATAA+AGG - chr1_3:64965346-64965365 None:intergenic 20.0%
!! ATAATTCATTACAATGAATC+GGG - chr1_3:64965676-64965695 None:intergenic 20.0%
!!! TTGAATCTTCAATTATTTTG+AGG + chr1_3:64965793-64965812 Msa0133630:intron 20.0%
!! TTACTTTGAACCAAAAATAA+AGG - chr1_3:64966012-64966031 None:intergenic 20.0%
!! TATTGTTAAAATCCATGTTA+TGG + chr1_3:64966161-64966180 Msa0133630:intron 20.0%
!! ATTGTTAAAATCCATGTTAT+GGG + chr1_3:64966162-64966181 Msa0133630:intron 20.0%
!! TTAAATTAAATCAAGAAGGT+TGG - chr1_3:64966245-64966264 None:intergenic 20.0%
!!! TTAAATGGATTGATGATATA+CGG - chr1_3:64966615-64966634 None:intergenic 20.0%
!!! GCAAAGTATTGAAAAATAAT+GGG - chr1_3:64967443-64967462 None:intergenic 20.0%
!!! TGCAAAGTATTGAAAAATAA+TGG - chr1_3:64967444-64967463 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr1_3:64967670-64967689 None:intergenic 20.0%
!!! AATTTGCTTATATTTAAGAC+CGG - chr1_3:64967769-64967788 None:intergenic 20.0%
!! AGTAGTTAATAAGGATAATT+TGG + chr1_3:64967903-64967922 Msa0133630:intron 20.0%
!!! GTAATTAAGATCTGTTTTTA+CGG + chr1_3:64968149-64968168 Msa0133630:intron 20.0%
!!! TAATTAAGATCTGTTTTTAC+GGG + chr1_3:64968150-64968169 Msa0133630:intron 20.0%
!!! GTAGTGATTGAAAATTTTAT+AGG - chr1_3:64968764-64968783 None:intergenic 20.0%
!!! AAATTTTCAATCACTACTTT+TGG + chr1_3:64968767-64968786 Msa0133630:intron 20.0%
!! TACATATGAGTTTACTTTAA+AGG + chr1_3:64969044-64969063 Msa0133630:intron 20.0%
!!! TGAAAAGTTGGTATATTTAT+AGG + chr1_3:64969138-64969157 Msa0133630:intron 20.0%
!!! GAAAAGTTGGTATATTTATA+GGG + chr1_3:64969139-64969158 Msa0133630:intron 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG - chr1_3:64969166-64969185 None:intergenic 20.0%
!! TAGAAACATTCAAAAATAAG+TGG + chr1_3:64969676-64969695 Msa0133630:intron 20.0%
!!! GCATTTTTGAAAATTTTACA+GGG - chr1_3:64969786-64969805 None:intergenic 20.0%
!!! ATGAATTTTTTCTGATTTTC+TGG + chr1_3:64970171-64970190 Msa0133630:intron 20.0%
!!! TGAATTTTTTCTGATTTTCT+GGG + chr1_3:64970172-64970191 Msa0133630:intron 20.0%
!! TTATAAACATGTTTGTAACA+TGG - chr1_3:64970322-64970341 None:intergenic 20.0%
!!! AAATAATTAACGGATTTTTC+CGG - chr1_3:64970482-64970501 None:intergenic 20.0%
!! AAGGGTGAAAAAATAATTAA+CGG - chr1_3:64970492-64970511 None:intergenic 20.0%
!!! TTTTTTTTCAATTTTACCAC+TGG + chr1_3:64970754-64970773 Msa0133630:intron 20.0%
!! AAAAATACAATAATCCATTC+CGG - chr1_3:64970795-64970814 None:intergenic 20.0%
!! ATTGACTGTATTAATAATCT+AGG + chr1_3:64971746-64971765 Msa0133630:intron 20.0%
!!! TCAAACGTTTTTAGTTTTTT+AGG + chr1_3:64971849-64971868 Msa0133630:intron 20.0%
!!! CAAACGTTTTTAGTTTTTTA+GGG + chr1_3:64971850-64971869 Msa0133630:intron 20.0%
!!! AAACGTTTTTAGTTTTTTAG+GGG + chr1_3:64971851-64971870 Msa0133630:intron 20.0%
!! AAATTAAAGTGTGATTTGAT+TGG + chr1_3:64972261-64972280 Msa0133630:intron 20.0%
!! TTAATTTATATGTGCACTTA+AGG - chr1_3:64972309-64972328 None:intergenic 20.0%
!!! GTTGATTCAATTTGAAATTT+AGG + chr1_3:64973970-64973989 Msa0133630:intron 20.0%
!!! TTCAATTTGAAATTTAGGAT+AGG + chr1_3:64973975-64973994 Msa0133630:intron 20.0%
!! TGCAAATTATAGATTTGATA+TGG - chr1_3:64974279-64974298 None:intergenic 20.0%
!! AAATCAGAAAAACAAAGTTT+AGG - chr1_3:64974344-64974363 None:intergenic 20.0%
!! ATATTATATACCACAAAAAC+AGG - chr1_3:64974799-64974818 None:intergenic 20.0%
!! TTGAAACATGAAATTATGTA+AGG + chr1_3:64974934-64974953 Msa0133630:intron 20.0%
!!! ATTATTCCTTTTGGTAATTT+TGG + chr1_3:64975001-64975020 Msa0133630:intron 20.0%
!! TTATAACGAAATCTATTTAG+AGG + chr1_3:64975220-64975239 Msa0133630:intron 20.0%
!! ATACATGAATTGTTTATGAA+GGG - chr1_3:64975252-64975271 None:intergenic 20.0%
!! AAATGATCTGTTAATTGATT+CGG - chr1_3:64975286-64975305 None:intergenic 20.0%
!! AATTACTTGGTTAGATATAT+AGG - chr1_3:64975719-64975738 None:intergenic 20.0%
!!! TAGTATGCAATAATACTTTT+TGG - chr1_3:64975769-64975788 None:intergenic 20.0%
!!! AAAAAGTATTATTGCATACT+AGG + chr1_3:64975768-64975787 Msa0133630:intron 20.0%
!! ATGAGATCAATATAAACTAA+TGG - chr1_3:64976360-64976379 None:intergenic 20.0%
!!! TATTTTTTGAGAAATGACAA+TGG + chr1_3:64976662-64976681 Msa0133630:intron 20.0%
!!! TTTTTAAGATAGACTTACAT+AGG + chr1_3:64976881-64976900 Msa0133630:intron 20.0%
!!! TTTATTTCTTTCAAAAAAGG+AGG - chr1_3:64977063-64977082 None:intergenic 20.0%
!! CTACAAATTCTTCAAATTAT+GGG - chr1_3:64977216-64977235 None:intergenic 20.0%
!! ACTACAAATTCTTCAAATTA+TGG - chr1_3:64977217-64977236 None:intergenic 20.0%
!!! TATGTTACTACAACTTTTAA+AGG + chr1_3:64978018-64978037 Msa0133630:intron 20.0%
!!! GTAAATTTAATCCTTTTTCA+AGG + chr1_3:64978042-64978061 Msa0133630:intron 20.0%
!! TGCTCAAAAAAAAATTCTTT+AGG - chr1_3:64978072-64978091 None:intergenic 20.0%
!! TGTAATGTACAAAATTCTTT+AGG - chr1_3:64978099-64978118 None:intergenic 20.0%
!!! TTTTGTACATTACACTTTTT+TGG + chr1_3:64978105-64978124 Msa0133630:intron 20.0%
!! TGTTTCACATACTATTAATT+AGG + chr1_3:64979071-64979090 Msa0133630:intron 20.0%
! TGTTATAATTGTGGTGATAA+TGG + chr1_3:64963957-64963976 Msa0133630:CDS 25.0%
! TAAGATCCAATATATACCTT+AGG - chr1_3:64964107-64964126 None:intergenic 25.0%
! AAAAACTTACAGTTATGAAC+AGG - chr1_3:64964289-64964308 None:intergenic 25.0%
! TGCTTCTCTAAATAAACAAA+TGG + chr1_3:64964506-64964525 Msa0133630:intron 25.0%
!! ATCATTAGTTTCTGATCATA+AGG + chr1_3:64964589-64964608 Msa0133630:intron 25.0%
!!! TTATCCTAAGAAAGTATCAA+AGG - chr1_3:64964667-64964686 None:intergenic 25.0%
! CAATTGAACAATAAAACATG+TGG - chr1_3:64965114-64965133 None:intergenic 25.0%
!!! CATGTTTTATTGTTCAATTG+TGG + chr1_3:64965114-64965133 Msa0133630:intron 25.0%
!!! TCTTTGAGTTATGTTTTTGA+TGG + chr1_3:64965153-64965172 Msa0133630:intron 25.0%
!!! CTTTGAGTTATGTTTTTGAT+GGG + chr1_3:64965154-64965173 Msa0133630:intron 25.0%
!!! CTTTTAGAACTTGATTTTGA+CGG + chr1_3:64965192-64965211 Msa0133630:intron 25.0%
!! TGCTTACATTTAGATTTTGT+TGG + chr1_3:64965225-64965244 Msa0133630:intron 25.0%
!! GCTTACATTTAGATTTTGTT+GGG + chr1_3:64965226-64965245 Msa0133630:intron 25.0%
!!! TTTTTTGTACTTTGCTGTTT+TGG + chr1_3:64965351-64965370 Msa0133630:intron 25.0%
! TAAAATTCCGCTACAAAATA+GGG - chr1_3:64965509-64965528 None:intergenic 25.0%
! TTAAAATTCCGCTACAAAAT+AGG - chr1_3:64965510-64965529 None:intergenic 25.0%
! CAATTTACTGTTCAGAAAAT+AGG + chr1_3:64965923-64965942 Msa0133630:intron 25.0%
!! AAGTTTGAGATTAACAAGTT+TGG + chr1_3:64966099-64966118 Msa0133630:intron 25.0%
! TTGTTAAAATCCATGTTATG+GGG + chr1_3:64966163-64966182 Msa0133630:intron 25.0%
!! AGAGATCTTGTTATAAGAAA+GGG + chr1_3:64966402-64966421 Msa0133630:intron 25.0%
! TACAACTGAATGCAATTAAA+TGG - chr1_3:64966630-64966649 None:intergenic 25.0%
! TGTAATTTCTTCTGATCTAT+TGG + chr1_3:64966646-64966665 Msa0133630:intron 25.0%
! TGCTTCTATTAGATGTAATA+TGG + chr1_3:64966702-64966721 Msa0133630:intron 25.0%
! CATTCAATTAATGATGTATG+TGG + chr1_3:64967803-64967822 Msa0133630:intron 25.0%
!! AATTTGCTTATATTTAGGAC+CGG + chr1_3:64967876-64967895 Msa0133630:intron 25.0%
!!! TTCAAAATAAGTGTCGTTTT+AGG - chr1_3:64967985-64968004 None:intergenic 25.0%
!!! AAACGACACTTATTTTGAAA+CGG + chr1_3:64967986-64968005 Msa0133630:intron 25.0%
!!! AATTAAGATCTGTTTTTACG+GGG + chr1_3:64968151-64968170 Msa0133630:intron 25.0%
!!! GTTTAAAATGACATTTTGTC+AGG - chr1_3:64968283-64968302 None:intergenic 25.0%
!!! GACAAAATGTCATTTTAAAC+TGG + chr1_3:64968283-64968302 Msa0133630:intron 25.0%
! TCGATCAACAATAAAATTCA+TGG + chr1_3:64968473-64968492 Msa0133630:intron 25.0%
!!! CATATATTTTTCGATACAAC+CGG + chr1_3:64968594-64968613 Msa0133630:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - chr1_3:64969108-64969127 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - chr1_3:64969107-64969126 None:intergenic 25.0%
!! ATATGAGTTTACTTTAAAGG+AGG + chr1_3:64969047-64969066 Msa0133630:intron 25.0%
!! TATGAGTTTACTTTAAAGGA+GGG + chr1_3:64969048-64969067 Msa0133630:intron 25.0%
!! AAATTTTCCATCTTCACTTT+TGG - chr1_3:64969075-64969094 None:intergenic 25.0%
!! TGAAGATGGAAAATTTTTGT+GGG + chr1_3:64969079-64969098 Msa0133630:intron 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG + chr1_3:64969107-64969126 Msa0133630:intron 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG + chr1_3:64969108-64969127 Msa0133630:intron 25.0%
!! GCGTCTTAATATAAAGTATT+TGG - chr1_3:64969332-64969351 None:intergenic 25.0%
! AAGGTCATTTGAATGAAAAT+TGG + chr1_3:64969409-64969428 Msa0133630:intron 25.0%
!!! GGCATTTTTGAAAATTTTAC+AGG - chr1_3:64969787-64969806 None:intergenic 25.0%
!!! TGAATCCAGATTTTAAAATC+AGG - chr1_3:64969820-64969839 None:intergenic 25.0%
! TGGATTCATGTTTACTATTT+CGG + chr1_3:64969832-64969851 Msa0133630:intron 25.0%
!! CTATTTCGGATTTTATAATC+CGG + chr1_3:64969846-64969865 Msa0133630:intron 25.0%
! GATTATACATAAGAATTGTC+CGG - chr1_3:64969868-64969887 None:intergenic 25.0%
!!! GAATTTTTTCTGATTTTCTG+GGG + chr1_3:64970173-64970192 Msa0133630:intron 25.0%
!!! TAACATGGATAGTCATTTTA+GGG - chr1_3:64970307-64970326 None:intergenic 25.0%
! ACAGTTCAGATTATATAATC+CGG + chr1_3:64970353-64970372 Msa0133630:intron 25.0%
! TCCGAAAACTTCAAAAAATA+GGG - chr1_3:64970450-64970469 None:intergenic 25.0%
! ATCCGAAAACTTCAAAAAAT+AGG - chr1_3:64970451-64970470 None:intergenic 25.0%
!! TGGTGTTTTCTTTTGTTAAA+GGG - chr1_3:64970510-64970529 None:intergenic 25.0%
!! ATGGTGTTTTCTTTTGTTAA+AGG - chr1_3:64970511-64970530 None:intergenic 25.0%
! AGTAATACTCGGAATAAAAT+GGG - chr1_3:64970698-64970717 None:intergenic 25.0%
! AAGTAATACTCGGAATAAAA+TGG - chr1_3:64970699-64970718 None:intergenic 25.0%
!!! TTGTATTTTTCAGATGTTTC+CGG + chr1_3:64970805-64970824 Msa0133630:intron 25.0%
!!! CTATTTCGGATTTTAAAATC+CGG - chr1_3:64970827-64970846 None:intergenic 25.0%
! GTTCTGCTAAAATACTATTT+CGG - chr1_3:64970841-64970860 None:intergenic 25.0%
!! AATAATCTAGGACTTGTTTA+AGG + chr1_3:64971758-64971777 Msa0133630:intron 25.0%
!! ACTTGTTTAAGGCTATAAAT+AGG + chr1_3:64971769-64971788 Msa0133630:intron 25.0%
! TGAAGAAAATTGAAGAAAAG+AGG - chr1_3:64971832-64971851 None:intergenic 25.0%
! AAATCACTAACAATATGGTA+TGG + chr1_3:64972029-64972048 Msa0133630:intron 25.0%
!! ATGGTATGGATTATATAATC+CGG + chr1_3:64972043-64972062 Msa0133630:intron 25.0%
!!! GGTATTTTTGAAAATTTTGC+AGG + chr1_3:64972072-64972091 Msa0133630:intron 25.0%
! TTGTCTAAACTGGAATAAAA+GGG - chr1_3:64972133-64972152 None:intergenic 25.0%
!!! GTGGTTTTATGTGTATATTA+AGG + chr1_3:64972177-64972196 Msa0133630:intron 25.0%
! ACTTAAACTAAATCCATGAA+TGG - chr1_3:64973827-64973846 None:intergenic 25.0%
! ACTTAAACTAAATCCATGAA+TGG - chr1_3:64973827-64973846 None:intergenic 25.0%
! ATTGAATCAACTTCAAACTT+GGG - chr1_3:64973961-64973980 None:intergenic 25.0%
! AATTGAATCAACTTCAAACT+TGG - chr1_3:64973962-64973981 None:intergenic 25.0%
! ATCATGTTGTAGTACATAAA+TGG + chr1_3:64974001-64974020 Msa0133630:intron 25.0%
! TCATGTTGTAGTACATAAAT+GGG + chr1_3:64974002-64974021 Msa0133630:intron 25.0%
! ATATGGTTCTCACATTAAAA+AGG - chr1_3:64974262-64974281 None:intergenic 25.0%
! ATAAAAAATGTTCAGAGTAG+TGG + chr1_3:64974585-64974604 Msa0133630:intron 25.0%
! TGCTGTAGCATTATTTATAT+CGG + chr1_3:64974631-64974650 Msa0133630:intron 25.0%
! TTTAAATTTCTGCGTTTGAT+TGG + chr1_3:64974753-64974772 Msa0133630:intron 25.0%
!! TGCAAGTATATTATTCCTTT+TGG + chr1_3:64974992-64975011 Msa0133630:intron 25.0%
! TGCTTAGTTATATAAACAGT+TGG + chr1_3:64975149-64975168 Msa0133630:intron 25.0%
! GATACATGAATTGTTTATGA+AGG - chr1_3:64975253-64975272 None:intergenic 25.0%
! TAAACTTCATAAATCTGCAA+TGG + chr1_3:64975387-64975406 Msa0133630:intron 25.0%
! ATTATAATACCTTTGGATCA+TGG - chr1_3:64975552-64975571 None:intergenic 25.0%
!! TCGTGTTATAACTACATTTT+TGG - chr1_3:64975816-64975835 None:intergenic 25.0%
!!! CTTTTTCACTTGTATGAATA+AGG - chr1_3:64975989-64976008 None:intergenic 25.0%
! AAAACTTCAACAACTATTCA+TGG - chr1_3:64976117-64976136 None:intergenic 25.0%
!!! CTTTTAGTGATTTTAAGTGT+TGG + chr1_3:64976139-64976158 Msa0133630:intron 25.0%
!! ACAAATTTTCTATGAGAAAC+TGG + chr1_3:64976232-64976251 Msa0133630:intron 25.0%
! CAATATAAACTAATGGCAAA+AGG - chr1_3:64976353-64976372 None:intergenic 25.0%
!! ACCTTTTCCCTTTATAAAAT+GGG + chr1_3:64976582-64976601 Msa0133630:intron 25.0%
!!! ATTTCTTTTTAGCATTGTTG+AGG - chr1_3:64977643-64977662 None:intergenic 25.0%
! AAGAACGATTCTCTATAAAA+GGG - chr1_3:64977795-64977814 None:intergenic 25.0%
! AAAGAACGATTCTCTATAAA+AGG - chr1_3:64977796-64977815 None:intergenic 25.0%
! TTTGATCAAATGCTTTATGA+AGG + chr1_3:64977834-64977853 Msa0133630:intron 25.0%
! TTGATCAAATGCTTTATGAA+GGG + chr1_3:64977835-64977854 Msa0133630:intron 25.0%
!!! TATTGATTCACTGGATTAAT+TGG + chr1_3:64977957-64977976 Msa0133630:intron 25.0%
! ATGAGTCATAAATAATGTAG+TGG - chr1_3:64978198-64978217 None:intergenic 25.0%
!!! TTTTTTCTTCTTCTTTCGTA+TGG + chr1_3:64978556-64978575 Msa0133630:intron 25.0%
!! TTTTTCTTCTTCTTTCGTAT+GGG + chr1_3:64978557-64978576 Msa0133630:intron 25.0%
! AGTAAACATGTTAATAGTGT+TGG + chr1_3:64978658-64978677 Msa0133630:intron 25.0%
! TTATTAGATCTTTACACACT+TGG + chr1_3:64978934-64978953 Msa0133630:intron 25.0%
AAAAAATCAGGGAAAAGGAA+AGG + chr1_3:64963465-64963484 Msa0133630:five_prime_UTR 30.0%
!!! TTCTTTTTTGATGGGTCTTT+TGG - chr1_3:64963690-64963709 None:intergenic 30.0%
ATAAGATATGTTTACGGTGT+CGG + chr1_3:64963874-64963893 Msa0133630:CDS 30.0%
!!! TGTTTTGTTTGTAAGGAACA+AGG + chr1_3:64964038-64964057 Msa0133630:CDS 30.0%
!!! GTTTTGTTTGTAAGGAACAA+GGG + chr1_3:64964039-64964058 Msa0133630:CDS 30.0%
! AAATGCCATGAGCATTTTTA+GGG - chr1_3:64964082-64964101 None:intergenic 30.0%
! TAAATGCCATGAGCATTTTT+AGG - chr1_3:64964083-64964102 None:intergenic 30.0%
!! TTGTTGTTTATATCATAGGG+TGG + chr1_3:64964172-64964191 Msa0133630:intron 30.0%
GAACACTGACACATTAATAT+TGG + chr1_3:64964377-64964396 Msa0133630:intron 30.0%
! TTGTACTAAAAAGTGTATCG+TGG - chr1_3:64964783-64964802 None:intergenic 30.0%
GTTATTTAGATTACACTGAG+TGG + chr1_3:64965297-64965316 Msa0133630:intron 30.0%
! TTTGGAGTATTTATGCATGT+TGG + chr1_3:64965369-64965388 Msa0133630:intron 30.0%
AATTGTGGAATGGAAAATAG+CGG - chr1_3:64965537-64965556 None:intergenic 30.0%
GTTCAAAATACATACACACA+AGG - chr1_3:64965615-64965634 None:intergenic 30.0%
AAAAAAAATAGTTGGTTGCC+TGG - chr1_3:64965716-64965735 None:intergenic 30.0%
AAATAACGAAGAAAAGTGGT+TGG - chr1_3:64965758-64965777 None:intergenic 30.0%
!! AACCACTTTTCTTCGTTATT+TGG + chr1_3:64965757-64965776 Msa0133630:intron 30.0%
AACCAAATAACGAAGAAAAG+TGG - chr1_3:64965762-64965781 None:intergenic 30.0%
AGGAAATCTATCAGTACTTT+CGG - chr1_3:64965982-64966001 None:intergenic 30.0%
! TTTGAGATTAACAAGTTTGG+TGG + chr1_3:64966102-64966121 Msa0133630:intron 30.0%
! GAGAGATCTTGTTATAAGAA+AGG + chr1_3:64966401-64966420 Msa0133630:intron 30.0%
! GAGATCTTGTTATAAGAAAG+GGG + chr1_3:64966403-64966422 Msa0133630:intron 30.0%
GCACTTTAAATGTAACTTCT+TGG + chr1_3:64966549-64966568 Msa0133630:intron 30.0%
ATGATATACGGAAAAATCTC+AGG - chr1_3:64966603-64966622 None:intergenic 30.0%
! CTCAGTACTGAAAGAAAAAA+TGG - chr1_3:64966737-64966756 None:intergenic 30.0%
GTTATCAACCATATTACAGT+CGG - chr1_3:64966762-64966781 None:intergenic 30.0%
! CTCAGTACTGAAAGAAAAAA+TGG - chr1_3:64966737-64966756 None:intergenic 30.0%
TAATCAAAGTTCACGACTTT+AGG - chr1_3:64966951-64966970 None:intergenic 30.0%
TAAAGTCGTGAACTTTGATT+AGG + chr1_3:64966950-64966969 Msa0133630:intron 30.0%
TGAGTTAACTGTAATCAATG+TGG + chr1_3:64966992-64967011 Msa0133630:intron 30.0%
GTTTGACAAAAGCTATACTT+TGG - chr1_3:64967039-64967058 None:intergenic 30.0%
TACTAGCAGAACAAAGAAAA+TGG - chr1_3:64967159-64967178 None:intergenic 30.0%
TTTCAATCTAGTTGAGATTC+AGG - chr1_3:64967223-64967242 None:intergenic 30.0%
AATCCTAATGTGCTTTCAAA+AGG + chr1_3:64967336-64967355 Msa0133630:intron 30.0%
!! TTTCCTTTTGAAAGCACATT+AGG - chr1_3:64967342-64967361 None:intergenic 30.0%
GTATATCAAACATCAACCAT+AGG - chr1_3:64967471-64967490 None:intergenic 30.0%
GTAGTGTGCAGAATATTAAT+TGG - chr1_3:64967708-64967727 None:intergenic 30.0%
GATGTATGTGGTTCATATTA+TGG - chr1_3:64967830-64967849 None:intergenic 30.0%
CATTCAACTAATGATGTATG+TGG - chr1_3:64967842-64967861 None:intergenic 30.0%
!! GAGGGAGTATTAAATAATAG+AGG + chr1_3:64968008-64968027 Msa0133630:intron 30.0%
TTGTGTAACCTAAAACAAAC+AGG - chr1_3:64968034-64968053 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr1_3:64968748-64968767 None:intergenic 30.0%
! GTGAAGATGGAAAATTTTTG+TGG + chr1_3:64969078-64969097 Msa0133630:intron 30.0%
CTCAAGTTCACATATGTTAA+CGG + chr1_3:64969638-64969657 Msa0133630:intron 30.0%
TCAAGTTCACATATGTTAAC+GGG + chr1_3:64969639-64969658 Msa0133630:intron 30.0%
TATAGTTAGGGCTAGAAAAT+GGG + chr1_3:64969726-64969745 Msa0133630:intron 30.0%
TTAAAATCAGGAATGCACAA+AGG - chr1_3:64969808-64969827 None:intergenic 30.0%
!!! GCATTCCTGATTTTAAAATC+TGG + chr1_3:64969812-64969831 Msa0133630:intron 30.0%
! GATGGAATTTTGGATTTTGA+GGG + chr1_3:64970106-64970125 Msa0133630:intron 30.0%
! ATGGAATTTTGGATTTTGAG+GGG + chr1_3:64970107-64970126 Msa0133630:intron 30.0%
ACCTGTTCTTAGTCAAAAAT+CGG - chr1_3:64970235-64970254 None:intergenic 30.0%
AAGAATAACCCAAAAACAGA+AGG + chr1_3:64970255-64970274 Msa0133630:intron 30.0%
!! GTAACATGGATAGTCATTTT+AGG - chr1_3:64970308-64970327 None:intergenic 30.0%
!!! TTTTTCAAGGTAAAACAGTC+CGG - chr1_3:64970375-64970394 None:intergenic 30.0%
! GACTGTTTTACCTTGAAAAA+GGG + chr1_3:64970375-64970394 Msa0133630:intron 30.0%
!!! GCCCTATTTTTTGAAGTTTT+CGG + chr1_3:64970446-64970465 Msa0133630:intron 30.0%
! AGTTTTCGGATTACAAAATC+CGG + chr1_3:64970460-64970479 Msa0133630:intron 30.0%
AACAAAAGAAAACACCATTC+CGG + chr1_3:64970513-64970532 Msa0133630:intron 30.0%
! AGTTTCCGGATTTTATAATC+CGG - chr1_3:64970535-64970554 None:intergenic 30.0%
TTATAAAATCCGGAAACTCA+AGG + chr1_3:64970537-64970556 Msa0133630:intron 30.0%
TATAAAATCCGGAAACTCAA+GGG + chr1_3:64970538-64970557 Msa0133630:intron 30.0%
!! AGGGCATTTTTGGAAAAAAT+AGG + chr1_3:64970557-64970576 Msa0133630:intron 30.0%
!! GGGCATTTTTGGAAAAAATA+GGG + chr1_3:64970558-64970577 Msa0133630:intron 30.0%
!! TATTACTTTTCTCACCCTAT+GGG - chr1_3:64970596-64970615 None:intergenic 30.0%
AAAGTAATACCCCTAGAAAA+TGG + chr1_3:64970607-64970626 Msa0133630:intron 30.0%
AAGTAATACCCCTAGAAAAT+GGG + chr1_3:64970608-64970627 Msa0133630:intron 30.0%
!! TCAGCTCTAAAGTTCAAATT+CGG + chr1_3:64970636-64970655 Msa0133630:intron 30.0%
!! TTTCAATTTTACCACTGGTT+CGG + chr1_3:64970759-64970778 Msa0133630:intron 30.0%
! TTAATCCGGAAAGTATATTC+CGG - chr1_3:64971576-64971595 None:intergenic 30.0%
ATATTCCGGAATGTAAAATC+CGG + chr1_3:64971646-64971665 Msa0133630:intron 30.0%
AATCCAATGTTGAATCTTTC+CGG - chr1_3:64971668-64971687 None:intergenic 30.0%
TTGAAAGAGAACCATTAATG+TGG + chr1_3:64971691-64971710 Msa0133630:intron 30.0%
TGAAAGAGAACCATTAATGT+GGG + chr1_3:64971692-64971711 Msa0133630:intron 30.0%
!!! TTTTAGTTTTTTAGGGGTGT+CGG + chr1_3:64971857-64971876 Msa0133630:intron 30.0%
TATTGCAGGATTCATATGAA+CGG - chr1_3:64971904-64971923 None:intergenic 30.0%
ACCATATTGTTAGTGATTTC+CGG - chr1_3:64972028-64972047 None:intergenic 30.0%
CTTGTCTAAACTGGAATAAA+AGG - chr1_3:64972134-64972153 None:intergenic 30.0%
! CTTAAGGTGAGAAACATTTT+TGG - chr1_3:64972293-64972312 None:intergenic 30.0%
CGAAATAGTGGTACAAATTA+GGG - chr1_3:64972582-64972601 None:intergenic 30.0%
TCATCTTCAGTATTCTGTTT+CGG - chr1_3:64972704-64972723 None:intergenic 30.0%
!! TTGATTTGAGTTCTGAGATT+GGG - chr1_3:64972841-64972860 None:intergenic 30.0%
!! TTTGATTTGAGTTCTGAGAT+TGG - chr1_3:64972842-64972861 None:intergenic 30.0%
!!! ATTCTTTTCTAGCTCTAAAG+CGG - chr1_3:64973011-64973030 None:intergenic 30.0%
AAGTTGCAAAAACTATGACT+AGG + chr1_3:64973086-64973105 Msa0133630:CDS 30.0%
CTGTTCAATATTATGCTCAT+TGG - chr1_3:64973149-64973168 None:intergenic 30.0%
CAATGAGCATAATATTGAAC+AGG + chr1_3:64973147-64973166 Msa0133630:CDS 30.0%
CATGTTGTAGTACATAAATG+GGG + chr1_3:64974003-64974022 Msa0133630:intron 30.0%
AAATGCTCAGTATATATAGC+AGG + chr1_3:64974160-64974179 Msa0133630:CDS 30.0%
AATTGTCACTAATGTCTAGT+TGG + chr1_3:64974303-64974322 Msa0133630:intron 30.0%
AAACAAAGTTTAGGCATCTA+AGG - chr1_3:64974335-64974354 None:intergenic 30.0%
! TTACTTCTATGTTTTGCTCA+CGG + chr1_3:64974374-64974393 Msa0133630:intron 30.0%
TAAAACACAGTTATCAATCC+CGG - chr1_3:64974674-64974693 None:intergenic 30.0%
TACATTAAAGCTTCCTTTAC+AGG + chr1_3:64974692-64974711 Msa0133630:intron 30.0%
CAAACGCAGAAATTTAAACA+AGG - chr1_3:64974751-64974770 None:intergenic 30.0%
AAAAACAGGTCATTGTCATA+AGG - chr1_3:64974785-64974804 None:intergenic 30.0%
TTCCACTTTAGTGAAAAATG+AGG + chr1_3:64974835-64974854 Msa0133630:intron 30.0%
!! ATCCTCATTTTTCACTAAAG+TGG - chr1_3:64974840-64974859 None:intergenic 30.0%
! ATAGAGTTCTATTGACTAGA+AGG - chr1_3:64974903-64974922 None:intergenic 30.0%
TAGCTTCCAAAATTACCAAA+AGG - chr1_3:64975010-64975029 None:intergenic 30.0%
!! GTTGTTGTCTTTTGTTTATC+TGG + chr1_3:64975035-64975054 Msa0133630:intron 30.0%
AGTCTTCCCTAAAAAAAAAC+TGG + chr1_3:64975064-64975083 Msa0133630:CDS 30.0%
!!! CTTCTGCCAGTTTTTTTTTA+GGG - chr1_3:64975073-64975092 None:intergenic 30.0%
!!! TCTTCTGCCAGTTTTTTTTT+AGG - chr1_3:64975074-64975093 None:intergenic 30.0%
TAAAAAAAAACTGGCAGAAG+AGG + chr1_3:64975073-64975092 Msa0133630:CDS 30.0%
AAACAATTCATGTATCTGAC+TGG + chr1_3:64975257-64975276 Msa0133630:intron 30.0%
! AGAAACTGAGAATTCGTTTT+AGG - chr1_3:64975318-64975337 None:intergenic 30.0%
!!! TGCTTATTTTGTAATGCACA+CGG + chr1_3:64975496-64975515 Msa0133630:CDS 30.0%
TAAAAAGAAACGGGGAAAAA+TGG - chr1_3:64975594-64975613 None:intergenic 30.0%
! TTTTTCCCCGTTTCTTTTTA+CGG + chr1_3:64975594-64975613 Msa0133630:intron 30.0%
! GACAGCTTTAACATATTAAC+TGG - chr1_3:64975658-64975677 None:intergenic 30.0%
! TTGTATGCTATTTGAGTTAG+TGG - chr1_3:64975680-64975699 None:intergenic 30.0%
GGTTAGATATATAGGAAGTT+GGG - chr1_3:64975711-64975730 None:intergenic 30.0%
TGGTTAGATATATAGGAAGT+TGG - chr1_3:64975712-64975731 None:intergenic 30.0%
ATTGTCAAATGGTTGGAATT+TGG + chr1_3:64975848-64975867 Msa0133630:intron 30.0%
CTCTCAAAGGTAAAAATTCA+CGG + chr1_3:64975959-64975978 Msa0133630:intron 30.0%
!! TAGGCACTTATTTGTTTCTA+TGG + chr1_3:64976054-64976073 Msa0133630:intron 30.0%
CGAACATTGAACAAACTATA+AGG - chr1_3:64976196-64976215 None:intergenic 30.0%
TCTTCATCATTCTCATATGT+AGG + chr1_3:64976325-64976344 Msa0133630:intron 30.0%
ATCATATCTTTCTTGATCGA+AGG + chr1_3:64976378-64976397 Msa0133630:intron 30.0%
! CACCTTTTCCCTTTATAAAA+TGG + chr1_3:64976581-64976600 Msa0133630:intron 30.0%
! CCTTTTCCCTTTATAAAATG+GGG + chr1_3:64976583-64976602 Msa0133630:intron 30.0%
TATCAATGTTTGAACGATTG+TGG - chr1_3:64976837-64976856 None:intergenic 30.0%
TTGTAGTACGTTACAAACAA+TGG + chr1_3:64977230-64977249 Msa0133630:intron 30.0%
TGTAGTACGTTACAAACAAT+GGG + chr1_3:64977231-64977250 Msa0133630:intron 30.0%
TTACAAACAATGGGCAAATA+TGG + chr1_3:64977240-64977259 Msa0133630:intron 30.0%
AATTTAGGGGAAAGAAACAA+AGG - chr1_3:64977447-64977466 None:intergenic 30.0%
TGAGAGCTTAGAGATAAAAA+CGG - chr1_3:64977480-64977499 None:intergenic 30.0%
! TTGAAGAGATCCTTCTTTTT+GGG - chr1_3:64977511-64977530 None:intergenic 30.0%
! ATTGAAGAGATCCTTCTTTT+TGG - chr1_3:64977512-64977531 None:intergenic 30.0%
!! TTTCTTTCTCATTTTTCCGT+TGG + chr1_3:64977567-64977586 Msa0133630:intron 30.0%
AAATAAGAACGAAACTTGCA+TGG - chr1_3:64977679-64977698 None:intergenic 30.0%
ATGCAAGTTTCGTTCTTATT+TGG + chr1_3:64977678-64977697 Msa0133630:intron 30.0%
TGATCAAATGCTTTATGAAG+GGG + chr1_3:64977836-64977855 Msa0133630:intron 30.0%
!! ACAACTGTAGTTTCTTGTTT+TGG + chr1_3:64977983-64978002 Msa0133630:intron 30.0%
!!! CAACTGTAGTTTCTTGTTTT+GGG + chr1_3:64977984-64978003 Msa0133630:intron 30.0%
!!! AACTGTAGTTTCTTGTTTTG+GGG + chr1_3:64977985-64978004 Msa0133630:intron 30.0%
CTTTAGGTATACCTTGAAAA+AGG - chr1_3:64978056-64978075 None:intergenic 30.0%
! TGTGTTTAAGATTGAGAATC+AGG + chr1_3:64978352-64978371 Msa0133630:CDS 30.0%
! AAAAAAGCATGCAAGAACTA+AGG - chr1_3:64978542-64978561 None:intergenic 30.0%
ACATCCAAATCTAAGAATAG+TGG - chr1_3:64978630-64978649 None:intergenic 30.0%
CATACTATTAATTAGGTCTC+CGG + chr1_3:64979078-64979097 Msa0133630:intron 30.0%
ATATCAAAGCTCATTTCACT+AGG - chr1_3:64979202-64979221 None:intergenic 30.0%
AGGAAGAAAAGAAAACCCTT+TGG + chr1_3:64963485-64963504 Msa0133630:five_prime_UTR 35.0%
TGAGACGAAACAAATCCAAA+GGG - chr1_3:64963503-64963522 None:intergenic 35.0%
ATGAGACGAAACAAATCCAA+AGG - chr1_3:64963504-64963523 None:intergenic 35.0%
CTGTGAAATTAGGTTTCGAA+GGG - chr1_3:64963567-64963586 None:intergenic 35.0%
!!! TTTTTTGATGGGTCTTTTGG+TGG - chr1_3:64963687-64963706 None:intergenic 35.0%
GAGAGCTGTTATATTTGCAA+GGG + chr1_3:64963801-64963820 Msa0133630:CDS 35.0%
! TTTTCCCATTCAGCTTTTTG+AGG - chr1_3:64963852-64963871 None:intergenic 35.0%
!!! TGCTCAGTGTTTTGTTTGTA+AGG + chr1_3:64964031-64964050 Msa0133630:CDS 35.0%
AATTGCCCTAAAAATGCTCA+TGG + chr1_3:64964074-64964093 Msa0133630:CDS 35.0%
GGTGGTTGTTGTAAAATATG+TGG + chr1_3:64964190-64964209 Msa0133630:CDS 35.0%
GGTTGTTGTAAAATATGTGG+TGG + chr1_3:64964193-64964212 Msa0133630:CDS 35.0%
TGTTCAGTGCTTCATATCAT+AGG - chr1_3:64964362-64964381 None:intergenic 35.0%
TTGAATGTAACCACATGCAT+TGG + chr1_3:64964424-64964443 Msa0133630:intron 35.0%
CAGTCCTTTGATACTTTCTT+AGG + chr1_3:64964660-64964679 Msa0133630:intron 35.0%
TACCACACTATTGACAACAT+AGG - chr1_3:64964824-64964843 None:intergenic 35.0%
AACATGTGGGTTCCAATATT+AGG - chr1_3:64965100-64965119 None:intergenic 35.0%
GACAATCAAGTTCCAAGATT+AGG - chr1_3:64965323-64965342 None:intergenic 35.0%
AACATATACAGCAGCTATAG+CGG + chr1_3:64965475-64965494 Msa0133630:intron 35.0%
! ACTATAGCCCTATTTTGTAG+CGG + chr1_3:64965499-64965518 Msa0133630:intron 35.0%
!! GCTATTTTCCATTCCACAAT+TGG + chr1_3:64965536-64965555 Msa0133630:intron 35.0%
CACAAGGACTTGTATCAATT+GGG - chr1_3:64965599-64965618 None:intergenic 35.0%
ACACAAGGACTTGTATCAAT+TGG - chr1_3:64965600-64965619 None:intergenic 35.0%
! AGCGAATCAGGATTTAAGTT+GGG - chr1_3:64965644-64965663 None:intergenic 35.0%
TAGCGAATCAGGATTTAAGT+TGG - chr1_3:64965645-64965664 None:intergenic 35.0%
CCAAAAATAAAGGACTTGAG+AGG - chr1_3:64966002-64966021 None:intergenic 35.0%
!!! CCTCTCAAGTCCTTTATTTT+TGG + chr1_3:64965999-64966018 Msa0133630:intron 35.0%
AGTCATCTGATATCATGAAG+TGG + chr1_3:64966041-64966060 Msa0133630:intron 35.0%
!!! GTCATTTTTTCCCCATAACA+TGG - chr1_3:64966176-64966195 None:intergenic 35.0%
!! CTTGAAAGTTGATAATCACG+AGG + chr1_3:64966208-64966227 Msa0133630:intron 35.0%
! AAATTTGTTTAACTGGCCAG+TGG + chr1_3:64966297-64966316 Msa0133630:intron 35.0%
! AATTTGTTTAACTGGCCAGT+GGG + chr1_3:64966298-64966317 Msa0133630:intron 35.0%
AAAAGACTTCAACTCGTGTA+TGG - chr1_3:64966462-64966481 None:intergenic 35.0%
AACTTCTTGGAAGTTATCTG+TGG + chr1_3:64966562-64966581 Msa0133630:intron 35.0%
GCTACACATTTATTCTCATC+TGG + chr1_3:64966672-64966691 Msa0133630:intron 35.0%
ATCATCTCCACTCACAAATT+TGG - chr1_3:64966838-64966857 None:intergenic 35.0%
ATTTGTGAGTGGAGATGATA+TGG + chr1_3:64966839-64966858 Msa0133630:CDS 35.0%
GGCAATGTAAAACCAAAGAA+AGG + chr1_3:64966924-64966943 Msa0133630:intron 35.0%
! TAAGTGCATGTCTGAAATCT+TGG - chr1_3:64967091-64967110 None:intergenic 35.0%
TTACCTCTTAATGTGTTCTG+TGG + chr1_3:64967116-64967135 Msa0133630:intron 35.0%
!!! CAATTTTTTCTGCAAGTCCT+AGG + chr1_3:64967250-64967269 Msa0133630:intron 35.0%
!!! TCCTAGGTAGCTCTAAATTT+TGG + chr1_3:64967266-64967285 Msa0133630:intron 35.0%
! TCCAAAATTTAGAGCTACCT+AGG - chr1_3:64967270-64967289 None:intergenic 35.0%
GGATTAATGAATCATCAGCA+AGG - chr1_3:64967321-64967340 None:intergenic 35.0%
!! AAGCGACTCTCATTTTGAAA+CGG - chr1_3:64967604-64967623 None:intergenic 35.0%
! TGCTTATATTTAAGACCGGA+GGG - chr1_3:64967765-64967784 None:intergenic 35.0%
! TTGCTTATATTTAAGACCGG+AGG - chr1_3:64967766-64967785 None:intergenic 35.0%
!!! GACACTTATTTTGAAACGGA+GGG + chr1_3:64967990-64968009 Msa0133630:intron 35.0%
!! AATAGAGGCCTGTTTGTTTT+AGG + chr1_3:64968023-64968042 Msa0133630:intron 35.0%
!!! GCTTGTGGTCATTTTTAAGT+TGG - chr1_3:64968309-64968328 None:intergenic 35.0%
!!! GCAATTTTTTTCCCAGTCAA+AGG - chr1_3:64968340-64968359 None:intergenic 35.0%
GTGAAAGCTTGAATTATGTC+AGG + chr1_3:64968495-64968514 Msa0133630:intron 35.0%
GATTCAAATTTCGATCTGAC+CGG - chr1_3:64968616-64968635 None:intergenic 35.0%
GAATCTCTGCCCAAAAAATT+TGG - chr1_3:64968974-64968993 None:intergenic 35.0%
TTTGTGGGACTAAAAGTTGA+AGG + chr1_3:64969094-64969113 Msa0133630:intron 35.0%
GAGGGACTAAAATGAAAAGT+TGG + chr1_3:64969126-64969145 Msa0133630:intron 35.0%
AGTATTTGGTATGTGTGTGT+GGG - chr1_3:64969318-64969337 None:intergenic 35.0%
AAGTATTTGGTATGTGTGTG+TGG - chr1_3:64969319-64969338 None:intergenic 35.0%
ATCTAATGTCACCCAATTTG+TGG + chr1_3:64969553-64969572 Msa0133630:intron 35.0%
TTAAATCTGGGCCACAAATT+GGG - chr1_3:64969567-64969586 None:intergenic 35.0%
ATTAAATCTGGGCCACAAAT+TGG - chr1_3:64969568-64969587 None:intergenic 35.0%
GTCACAGTGACATTAAATCT+GGG - chr1_3:64969579-64969598 None:intergenic 35.0%
TGTCACAGTGACATTAAATC+TGG - chr1_3:64969580-64969599 None:intergenic 35.0%
ATGTCACACAAGTATTTCTC+AGG + chr1_3:64969603-64969622 Msa0133630:intron 35.0%
TATGTGAACTTGAGAAGACT+CGG - chr1_3:64969632-64969651 None:intergenic 35.0%
!! CATTTTCTAGCCCTAACTAT+AGG - chr1_3:64969727-64969746 None:intergenic 35.0%
CTATAGTTAGGGCTAGAAAA+TGG + chr1_3:64969725-64969744 Msa0133630:intron 35.0%
! TTGAAAATTTTACAGGGCAC+AGG - chr1_3:64969780-64969799 None:intergenic 35.0%
TGAAAAATGGGTCTAAACGA+TGG + chr1_3:64970088-64970107 Msa0133630:intron 35.0%
! CGATGGAATTTTGGATTTTG+AGG + chr1_3:64970105-64970124 Msa0133630:intron 35.0%
! TAGTCAAAAATCGGGTTTTC+AGG - chr1_3:64970226-64970245 None:intergenic 35.0%
CCTGTTCTTAGTCAAAAATC+GGG - chr1_3:64970234-64970253 None:intergenic 35.0%
!! ACTCTCATCCTTCTGTTTTT+GGG - chr1_3:64970266-64970285 None:intergenic 35.0%
! AACTCTCATCCTTCTGTTTT+TGG - chr1_3:64970267-64970286 None:intergenic 35.0%
AAAACAGAAGGATGAGAGTT+AGG + chr1_3:64970267-64970286 Msa0133630:intron 35.0%
! GGACTGTTTTACCTTGAAAA+AGG + chr1_3:64970374-64970393 Msa0133630:intron 35.0%
!! TACCTTGAAAAAGGGTGTTT+CGG + chr1_3:64970383-64970402 Msa0133630:intron 35.0%
AGATTCCGGATTACATAATC+CGG - chr1_3:64970415-64970434 None:intergenic 35.0%
CCATTCCGGATTATAAAATC+CGG + chr1_3:64970527-64970546 Msa0133630:intron 35.0%
!! GTATTACTTTTCTCACCCTA+TGG - chr1_3:64970597-64970616 None:intergenic 35.0%
TTGTATGGCAAATGTGGTTT+GGG - chr1_3:64970662-64970681 None:intergenic 35.0%
ATTGTATGGCAAATGTGGTT+TGG - chr1_3:64970663-64970682 None:intergenic 35.0%
AAACCACATTTGCCATACAA+TGG + chr1_3:64970662-64970681 Msa0133630:intron 35.0%
AATACTCGGAATAAAATGGG+TGG - chr1_3:64970695-64970714 None:intergenic 35.0%
AAAAAAAAATATGGCGCACG+AGG - chr1_3:64970740-64970759 None:intergenic 35.0%
! ATACTAGTGGTTAGGCTTTT+AGG - chr1_3:64971039-64971058 None:intergenic 35.0%
TATGTCCTATCACATACTAG+TGG - chr1_3:64971052-64971071 None:intergenic 35.0%
GTTTGTATGAACGGTTAATG+AGG - chr1_3:64971257-64971276 None:intergenic 35.0%
ACTTTCAGGGTTTGTATGAA+CGG - chr1_3:64971266-64971285 None:intergenic 35.0%
GGTTTGGAAGGCTATTTATA+GGG + chr1_3:64971390-64971409 Msa0133630:intron 35.0%
TCAGTGGTCAAGTCAAAAAA+AGG - chr1_3:64971475-64971494 None:intergenic 35.0%
!! GCATTCTGGAATATACAATC+CGG + chr1_3:64971534-64971553 Msa0133630:intron 35.0%
AAGTATATTCCGGAAACCAA+AGG - chr1_3:64971566-64971585 None:intergenic 35.0%
TTTCCGGATTAATGCGATAA+TGG + chr1_3:64971584-64971603 Msa0133630:intron 35.0%
TCACCATTATCGCATTAATC+CGG - chr1_3:64971590-64971609 None:intergenic 35.0%
! TCTTTCCGGATTTTACATTC+CGG - chr1_3:64971654-64971673 None:intergenic 35.0%
AATCCGGAAAGATTCAACAT+TGG + chr1_3:64971662-64971681 Msa0133630:intron 35.0%
AGTCAATGAAAACGTGTTAG+TGG - chr1_3:64971733-64971752 None:intergenic 35.0%
!! ATGGAGGTATTTGTTGAAGA+TGG - chr1_3:64971798-64971817 None:intergenic 35.0%
AAAAGAGGTGAAGTGAAGAA+TGG - chr1_3:64971817-64971836 None:intergenic 35.0%
GTGTCTTTCTTTGATGTCAA+AGG - chr1_3:64971969-64971988 None:intergenic 35.0%
!!! CTGGTTCGGATTTAATTTTC+CGG + chr1_3:64972006-64972025 Msa0133630:intron 35.0%
TCCGGAAATCACTAACAATA+TGG + chr1_3:64972024-64972043 Msa0133630:intron 35.0%
TGGATTATATAATCCGGACT+AGG + chr1_3:64972049-64972068 Msa0133630:intron 35.0%
GGATTATATAATCCGGACTA+GGG + chr1_3:64972050-64972069 Msa0133630:intron 35.0%
! GATTATATAATCCGGACTAG+GGG + chr1_3:64972051-64972070 Msa0133630:intron 35.0%
TTTCAAAAATACCCCTAGTC+CGG - chr1_3:64972065-64972084 None:intergenic 35.0%
GAACTGAAACTTGTCTAAAC+TGG - chr1_3:64972143-64972162 None:intergenic 35.0%
! TTTCAGTTCGAGTGAGTTTT+CGG + chr1_3:64972154-64972173 Msa0133630:intron 35.0%
TAAAATCATTGTCGTTCTCG+CGG + chr1_3:64972526-64972545 Msa0133630:intron 35.0%
GCGAAATAGTGGTACAAATT+AGG - chr1_3:64972583-64972602 None:intergenic 35.0%
GATAGTGAATTCTACGATTG+CGG - chr1_3:64972605-64972624 None:intergenic 35.0%
TATTCGCTGTTCATGAATTC+AGG - chr1_3:64972636-64972655 None:intergenic 35.0%
GTAAGAAGAAGAAGAAGAAG+AGG + chr1_3:64972729-64972748 Msa0133630:CDS 35.0%
GTGTAGATGGAGAAAAAAGA+AGG + chr1_3:64972751-64972770 Msa0133630:CDS 35.0%
!! TGATTTGAGTTCTGAGATTG+GGG - chr1_3:64972840-64972859 None:intergenic 35.0%
!! TTCTTCCTATTCTTTTTCGC+GGG - chr1_3:64972902-64972921 None:intergenic 35.0%
!! GTTCTTCCTATTCTTTTTCG+CGG - chr1_3:64972903-64972922 None:intergenic 35.0%
CGAAAAAGAATAGGAAGAAC+AGG + chr1_3:64972903-64972922 Msa0133630:CDS 35.0%
AGAATAGGAAGAACAGGAAT+AGG + chr1_3:64972909-64972928 Msa0133630:CDS 35.0%
! AAGAAGAAGAGCATGATCAA+TGG + chr1_3:64972935-64972954 Msa0133630:CDS 35.0%
!!! TTCTTTTCTAGCTCTAAAGC+GGG - chr1_3:64973010-64973029 None:intergenic 35.0%
!!! ATTCTTTTCTAGCTCTAACG+CGG - chr1_3:64973047-64973066 None:intergenic 35.0%
! AAACGAAAAAGCGTGCAAAA+TGG + chr1_3:64973115-64973134 Msa0133630:CDS 35.0%
! AACGAAAAAGCGTGCAAAAT+GGG + chr1_3:64973116-64973135 Msa0133630:CDS 35.0%
ACATGTAAGCTTAGATGAAC+TGG + chr1_3:64973246-64973265 Msa0133630:CDS 35.0%
! ACTTTGAGAGAAAAAAGACG+AGG + chr1_3:64973278-64973297 Msa0133630:CDS 35.0%
! GGAAAAAAAGAAGGAGTACA+TGG + chr1_3:64973303-64973322 Msa0133630:CDS 35.0%
! ACTTTGAGAGAAAAAAGACG+AGG + chr1_3:64973278-64973297 Msa0133630:CDS 35.0%
! GGAAAAAAAGAAGGAGTACA+TGG + chr1_3:64973303-64973322 Msa0133630:CDS 35.0%
CAAGGTGAAGTCAAAACTAA+CGG + chr1_3:64973520-64973539 Msa0133630:CDS 35.0%
AAGGTGAAGTCAAAACTAAC+GGG + chr1_3:64973521-64973540 Msa0133630:CDS 35.0%
TCTTCTGTTCTGCAACTATT+GGG - chr1_3:64973657-64973676 None:intergenic 35.0%
ATCTTCTGTTCTGCAACTAT+TGG - chr1_3:64973658-64973677 None:intergenic 35.0%
CAAAGAAGAAACACAAGAAG+AGG + chr1_3:64973680-64973699 Msa0133630:CDS 35.0%
AGAAACACAAGAAGAGGAAA+AGG + chr1_3:64973686-64973705 Msa0133630:CDS 35.0%
ATGGTACGTAATACCATTCA+TGG + chr1_3:64973811-64973830 Msa0133630:intron 35.0%
AGTACATAAATGGGGTAACT+TGG + chr1_3:64974011-64974030 Msa0133630:intron 35.0%
!! TTGGCTTTTGCAGTTATGTT+GGG + chr1_3:64974030-64974049 Msa0133630:intron 35.0%
! AAGCTTTTGGCATTGTTGTA+TGG - chr1_3:64974077-64974096 None:intergenic 35.0%
! TGGAGAGAGATTTAAGCTTT+TGG - chr1_3:64974090-64974109 None:intergenic 35.0%
AAAGCTTAAATCTCTCTCCA+AGG + chr1_3:64974090-64974109 Msa0133630:CDS 35.0%
!! AGGAAGTTTGCTTCTTTTGT+GGG + chr1_3:64974116-64974135 Msa0133630:CDS 35.0%
TGGTTCTCACATTAAAAAGG+TGG - chr1_3:64974259-64974278 None:intergenic 35.0%
! CACTAATGTCTAGTTGGTTT+AGG + chr1_3:64974309-64974328 Msa0133630:intron 35.0%
AAAAATGTTCAGAGTAGTGG+TGG + chr1_3:64974588-64974607 Msa0133630:intron 35.0%
AGATGAATCAATGCCTGTAA+AGG - chr1_3:64974708-64974727 None:intergenic 35.0%
AATTTCTGCGTTTGATTGGA+CGG + chr1_3:64974757-64974776 Msa0133630:intron 35.0%
!!! ATGACAATGACCTGTTTTTG+TGG + chr1_3:64974786-64974805 Msa0133630:intron 35.0%
! AGTTCTATTGACTAGAAGGA+AGG - chr1_3:64974899-64974918 None:intergenic 35.0%
!! GCTCTTTCGAAATGGATTTT+TGG + chr1_3:64974963-64974982 Msa0133630:intron 35.0%
!! CTTTCGAAATGGATTTTTGG+CGG + chr1_3:64974966-64974985 Msa0133630:intron 35.0%
ACTCTAATAAAATCCCCTTG+TGG - chr1_3:64975108-64975127 None:intergenic 35.0%
CATAAATCTGCAATGGTACT+AGG + chr1_3:64975394-64975413 Msa0133630:intron 35.0%
!!! GCTTATTTTGTAATGCACAC+GGG + chr1_3:64975497-64975516 Msa0133630:CDS 35.0%
TGCAGATCCGTAAAAAGAAA+CGG - chr1_3:64975604-64975623 None:intergenic 35.0%
AGGAATGCAGTACAATTACT+TGG - chr1_3:64975732-64975751 None:intergenic 35.0%
!!! TTTTGGAATAGATGCAGAAC+AGG - chr1_3:64975752-64975771 None:intergenic 35.0%
ACTTGTCCATGATTGTCAAA+TGG + chr1_3:64975837-64975856 Msa0133630:intron 35.0%
TTCCAACCATTTGACAATCA+TGG - chr1_3:64975846-64975865 None:intergenic 35.0%
! CGTGAATTTTTACCTTTGAG+AGG - chr1_3:64975961-64975980 None:intergenic 35.0%
TTCTCGAACTAACACAGATA+AGG - chr1_3:64976015-64976034 None:intergenic 35.0%
! AACAAATGAGTTGAGTGTCT+AGG + chr1_3:64976035-64976054 Msa0133630:intron 35.0%
!! TGTTTCTATGGCTTTAGAAG+AGG + chr1_3:64976066-64976085 Msa0133630:intron 35.0%
TGCTTGTTCCCATTATTTGT+AGG + chr1_3:64976450-64976469 Msa0133630:intron 35.0%
GCTTGTTCCCATTATTTGTA+GGG + chr1_3:64976451-64976470 Msa0133630:intron 35.0%
CTTGTTCCCATTATTTGTAG+GGG + chr1_3:64976452-64976471 Msa0133630:intron 35.0%
! CCCCATTTTATAAAGGGAAA+AGG - chr1_3:64976586-64976605 None:intergenic 35.0%
! ACACGACCCCATTTTATAAA+GGG - chr1_3:64976592-64976611 None:intergenic 35.0%
! AACACGACCCCATTTTATAA+AGG - chr1_3:64976593-64976612 None:intergenic 35.0%
!! GATACTTTTTGCACGAAACT+TGG + chr1_3:64976690-64976709 Msa0133630:intron 35.0%
AGCTACTCAATCCACTTTAA+AGG - chr1_3:64976760-64976779 None:intergenic 35.0%
TGTTGAGGATAATAGAGACA+TGG - chr1_3:64977628-64977647 None:intergenic 35.0%
! CAAGTTTCGTTCTTATTTGG+CGG + chr1_3:64977681-64977700 Msa0133630:intron 35.0%
TTTGCAGTTGCTCTATTTCA+CGG - chr1_3:64977754-64977773 None:intergenic 35.0%
TAAGATTGAGAATCAGGAAG+TGG + chr1_3:64978358-64978377 Msa0133630:CDS 35.0%
! GCAAGATTTTCTTCATTGCA+TGG + chr1_3:64978504-64978523 Msa0133630:CDS 35.0%
CACACCACTATTCTTAGATT+TGG + chr1_3:64978623-64978642 Msa0133630:intron 35.0%
! TAATAGTGTTGGATCGAGAT+CGG + chr1_3:64978669-64978688 Msa0133630:intron 35.0%
GCATTAATGCATGAATTTGC+TGG + chr1_3:64978801-64978820 Msa0133630:intron 35.0%
TGTCTCACCTTTGATATATC+CGG - chr1_3:64979100-64979119 None:intergenic 35.0%
ATCAAAGGTGAGACATAAGA+TGG + chr1_3:64979105-64979124 Msa0133630:CDS 35.0%
GCTGTGAAATTAGGTTTCGA+AGG - chr1_3:64963568-64963587 None:intergenic 40.0%
!! TCTTTGGCTCACCATTTTTG+TGG - chr1_3:64963598-64963617 None:intergenic 40.0%
CGAGAGCTGTTATATTTGCA+AGG + chr1_3:64963800-64963819 Msa0133630:CDS 40.0%
TCTGTCCTCAAAAAGCTGAA+TGG + chr1_3:64963844-64963863 Msa0133630:CDS 40.0%
CTGTCCTCAAAAAGCTGAAT+GGG + chr1_3:64963845-64963864 Msa0133630:CDS 40.0%
TGCTCATGGCATTTATCCTA+AGG + chr1_3:64964088-64964107 Msa0133630:CDS 40.0%
CAAGGGATTGTCCTGATAAA+GGG + chr1_3:64964230-64964249 Msa0133630:CDS 40.0%
AATCCATTCTGCCCTTTATC+AGG - chr1_3:64964244-64964263 None:intergenic 40.0%
! GATAAAGGGCAGAATGGATT+TGG + chr1_3:64964244-64964263 Msa0133630:CDS 40.0%
!! ATTGGTGTCATGTTGGATAC+TGG + chr1_3:64964442-64964461 Msa0133630:intron 40.0%
! ACCCTTCAATCTGAAGTGTA+AGG + chr1_3:64964469-64964488 Msa0133630:intron 40.0%
CCCTTACACTTCAGATTGAA+GGG - chr1_3:64964473-64964492 None:intergenic 40.0%
! CCCTTCAATCTGAAGTGTAA+GGG + chr1_3:64964470-64964489 Msa0133630:intron 40.0%
TCCCTTACACTTCAGATTGA+AGG - chr1_3:64964474-64964493 None:intergenic 40.0%
AGCCTATGTTGTCAATAGTG+TGG + chr1_3:64964819-64964838 Msa0133630:intron 40.0%
! CGCTTTTCAACCACTAATAG+CGG - chr1_3:64964929-64964948 None:intergenic 40.0%
CGCTATTAGTGGTTGAAAAG+CGG + chr1_3:64964927-64964946 Msa0133630:intron 40.0%
CACACACAAATTGCAACAGT+GGG - chr1_3:64964966-64964985 None:intergenic 40.0%
ACACACACAAATTGCAACAG+TGG - chr1_3:64964967-64964986 None:intergenic 40.0%
CACTTTGAGTGGCCTAATAT+TGG + chr1_3:64965085-64965104 Msa0133630:intron 40.0%
ATGTTGTCAATCTCAGACAG+CGG - chr1_3:64965460-64965479 None:intergenic 40.0%
!! GCACTTGTTGTATCTCAACT+TGG + chr1_3:64965561-64965580 Msa0133630:intron 40.0%
! CTTGTTGTATCTCAACTTGG+TGG + chr1_3:64965564-64965583 Msa0133630:intron 40.0%
TATCGTGAATTAGTGTAGCC+AGG + chr1_3:64965695-64965714 Msa0133630:intron 40.0%
! GAGATTAACAAGTTTGGTGG+TGG + chr1_3:64966105-64966124 Msa0133630:intron 40.0%
TGAATAAGAACAATGCCCAC+TGG - chr1_3:64966316-64966335 None:intergenic 40.0%
GATCTCTCTCATCTCTCTAT+GGG - chr1_3:64966389-64966408 None:intergenic 40.0%
AGATCTCTCTCATCTCTCTA+TGG - chr1_3:64966390-64966409 None:intergenic 40.0%
ACTGAGAACCGACTGTAATA+TGG + chr1_3:64966751-64966770 Msa0133630:intron 40.0%
! AATTTGGTAACCTGACCACT+GGG - chr1_3:64966822-64966841 None:intergenic 40.0%
! AAATTTGGTAACCTGACCAC+TGG - chr1_3:64966823-64966842 None:intergenic 40.0%
CAGGTTACCAAATTTGTGAG+TGG + chr1_3:64966828-64966847 Msa0133630:CDS 40.0%
CACAACAGAAGTAAAAAGCG+AGG + chr1_3:64966872-64966891 Msa0133630:intron 40.0%
AAGTCTGCAAAGTCTGAAGA+TGG + chr1_3:64966903-64966922 Msa0133630:intron 40.0%
!! ACGACTTTAGGACCTTTCTT+TGG - chr1_3:64966939-64966958 None:intergenic 40.0%
! GTCTGAAATCTTGGTGAGTT+TGG - chr1_3:64967082-64967101 None:intergenic 40.0%
TGTCCACAGAACACATTAAG+AGG - chr1_3:64967122-64967141 None:intergenic 40.0%
AGTACTTCTAAGCCTACACT+AGG + chr1_3:64967175-64967194 Msa0133630:intron 40.0%
ATTCAGGAGATTGCAATGCA+TGG - chr1_3:64967207-64967226 None:intergenic 40.0%
!!! GACTCTCATTTTGAAACGGA+TGG - chr1_3:64967600-64967619 None:intergenic 40.0%
AAACTAACCAATACTCCCTC+CGG + chr1_3:64967747-64967766 Msa0133630:intron 40.0%
! TTGCTTATATTTAGGACCGG+AGG + chr1_3:64967879-64967898 Msa0133630:intron 40.0%
! TGCTTATATTTAGGACCGGA+GGG + chr1_3:64967880-64967899 Msa0133630:intron 40.0%
TCCTTATTAACTACTCCCTC+CGG - chr1_3:64967898-64967917 None:intergenic 40.0%
!!! CGACACTTATTTTGAAACGG+AGG + chr1_3:64967989-64968008 Msa0133630:intron 40.0%
CGAGCTACAAGTTTACAACT+TGG - chr1_3:64968544-64968563 None:intergenic 40.0%
ATGAAAACCAGTCGAGTACA+AGG + chr1_3:64969436-64969455 Msa0133630:intron 40.0%
GCAATGTCAATGACAATGTG+TGG - chr1_3:64969515-64969534 None:intergenic 40.0%
GTGACATTAGATGTGTTGTG+TGG - chr1_3:64969545-64969564 None:intergenic 40.0%
ATGTGAACTTGAGAAGACTC+GGG - chr1_3:64969631-64969650 None:intergenic 40.0%
TAACGCCACTACCTATAGTT+AGG + chr1_3:64969713-64969732 Msa0133630:intron 40.0%
AACGCCACTACCTATAGTTA+GGG + chr1_3:64969714-64969733 Msa0133630:intron 40.0%
TGAAATGTGAGAGAGTCTGA+TGG - chr1_3:64969893-64969912 None:intergenic 40.0%
! GGGTCTAAACGATGGAATTT+TGG + chr1_3:64970096-64970115 Msa0133630:intron 40.0%
!! GAATTTTGGATTTTGAGGGG+CGG + chr1_3:64970110-64970129 Msa0133630:intron 40.0%
!! CTGATTTTCTGGGGAAGTTT+CGG + chr1_3:64970182-64970201 Msa0133630:intron 40.0%
!! CCCGATTTTTGACTAAGAAC+AGG + chr1_3:64970231-64970250 Msa0133630:intron 40.0%
!! ACCTTGAAAAAGGGTGTTTC+GGG + chr1_3:64970384-64970403 Msa0133630:intron 40.0%
GGTTTCCGGATTATGTAATC+CGG + chr1_3:64970407-64970426 Msa0133630:intron 40.0%
! CCGGATTTTATAATCCGGAA+TGG - chr1_3:64970530-64970549 None:intergenic 40.0%
CAAAAATGCCCTTGAGTTTC+CGG - chr1_3:64970549-64970568 None:intergenic 40.0%
TAATACCCCTAGAAAATGGG+CGG + chr1_3:64970611-64970630 Msa0133630:intron 40.0%
GGAATAAAATGGGTGGAGAT+GGG - chr1_3:64970688-64970707 None:intergenic 40.0%
AGGGTGCGAAAAGTAATACT+CGG - chr1_3:64970709-64970728 None:intergenic 40.0%
CCTATCACATACTAGTGGTT+AGG - chr1_3:64971047-64971066 None:intergenic 40.0%
CCTAACCACTAGTATGTGAT+AGG + chr1_3:64971044-64971063 Msa0133630:intron 40.0%
GATAGGACATACCAGTAGTT+TGG + chr1_3:64971061-64971080 Msa0133630:intron 40.0%
CATACCAGTAGTTTGGCTAT+TGG + chr1_3:64971068-64971087 Msa0133630:intron 40.0%
TTTGGCTATTGGAGGAAAAC+CGG + chr1_3:64971079-64971098 Msa0133630:intron 40.0%
AGAAGAAAACAATGTCCCTG+AGG + chr1_3:64971127-64971146 Msa0133630:intron 40.0%
GAAGAAAACAATGTCCCTGA+GGG + chr1_3:64971128-64971147 Msa0133630:intron 40.0%
GTATGAACGGTTAATGAGGA+TGG - chr1_3:64971253-64971272 None:intergenic 40.0%
! AACCCTGAAAGTTTTCAACG+AGG + chr1_3:64971274-64971293 Msa0133630:intron 40.0%
!! CGTTGGCCTTTCATAGATAA+GGG - chr1_3:64971300-64971319 None:intergenic 40.0%
!! TCGTTGGCCTTTCATAGATA+AGG - chr1_3:64971301-64971320 None:intergenic 40.0%
TATCTATGAAAGGCCAACGA+TGG + chr1_3:64971301-64971320 Msa0133630:intron 40.0%
TGGAAAACCATGGTTGTAGA+AGG + chr1_3:64971321-64971340 Msa0133630:intron 40.0%
TCTTCTTCCTTCTACAACCA+TGG - chr1_3:64971331-64971350 None:intergenic 40.0%
ATGGTTGTAGAAGGAAGAAG+AGG + chr1_3:64971330-64971349 Msa0133630:intron 40.0%
GGGTTTGGAAGGCTATTTAT+AGG + chr1_3:64971389-64971408 Msa0133630:intron 40.0%
TTGGAAGGCTATTTATAGGG+AGG + chr1_3:64971393-64971412 Msa0133630:intron 40.0%
TGGAAGGCTATTTATAGGGA+GGG + chr1_3:64971394-64971413 Msa0133630:intron 40.0%
TGACCACTGACAAAAATGTG+TGG + chr1_3:64971485-64971504 Msa0133630:intron 40.0%
GGTTTCCGGAATATACTTTC+CGG + chr1_3:64971568-64971587 Msa0133630:intron 40.0%
! TAATGCGATAATGGTGAACG+AGG + chr1_3:64971593-64971612 Msa0133630:intron 40.0%
! AATGCGATAATGGTGAACGA+GGG + chr1_3:64971594-64971613 Msa0133630:intron 40.0%
AAAAGTTGGCACTTCCTGTA+GGG + chr1_3:64971617-64971636 Msa0133630:intron 40.0%
GAGAACCATTAATGTGGGTT+TGG + chr1_3:64971697-64971716 Msa0133630:intron 40.0%
ACCATTAATGTGGGTTTGGA+CGG + chr1_3:64971701-64971720 Msa0133630:intron 40.0%
AATAGCATTTCAGCCTGTGT+GGG + chr1_3:64971920-64971939 Msa0133630:intron 40.0%
! TTCAGTTCGAGTGAGTTTTC+GGG + chr1_3:64972155-64972174 Msa0133630:intron 40.0%
! AGAAGAAGAAGAGGTGTAGA+TGG + chr1_3:64972738-64972757 Msa0133630:CDS 40.0%
ATTGGGGCAACTACTACTAA+GGG - chr1_3:64972824-64972843 None:intergenic 40.0%
GCGGGGATATTATTTGAATC+AGG - chr1_3:64972884-64972903 None:intergenic 40.0%
ATATCCCCGCGAAAAAGAAT+AGG + chr1_3:64972894-64972913 Msa0133630:CDS 40.0%
!! TCTTCCTATTCTTTTTCGCG+GGG - chr1_3:64972901-64972920 None:intergenic 40.0%
!!! TTCTTTTCTAGCTCTAACGC+GGG - chr1_3:64973046-64973065 None:intergenic 40.0%
! ACGAAAAAGCGTGCAAAATG+GGG + chr1_3:64973117-64973136 Msa0133630:CDS 40.0%
TATTGAACAGGCTGAAACTG+CGG + chr1_3:64973159-64973178 Msa0133630:CDS 40.0%
TCTGATTGACAAAGCAATCG+CGG + chr1_3:64973213-64973232 Msa0133630:CDS 40.0%
TGAGAGAAAAAAGACGAGGA+AGG + chr1_3:64973282-64973301 Msa0133630:CDS 40.0%
GACGAGGAAGGAAAAAAAGA+AGG + chr1_3:64973294-64973313 Msa0133630:CDS 40.0%
! AAAAGAAGGAGTACATGGAG+AGG + chr1_3:64973308-64973327 Msa0133630:CDS 40.0%
ATGGAGAGGAAAAAACTGCA+GGG + chr1_3:64973322-64973341 Msa0133630:CDS 40.0%
CAGGGTGAAGTCAAAACTAA+CGG + chr1_3:64973340-64973359 Msa0133630:CDS 40.0%
AGGGTGAAGTCAAAACTAAC+GGG + chr1_3:64973341-64973360 Msa0133630:CDS 40.0%
TGAGTGTCCATTACAACAGA+CGG - chr1_3:64973400-64973419 None:intergenic 40.0%
TCTTCCAGATCTGTGACTAT+CGG - chr1_3:64973433-64973452 None:intergenic 40.0%
TGAGAGAAAAAAGACGAGGA+AGG + chr1_3:64973282-64973301 Msa0133630:CDS 40.0%
GACGAGGAAGGAAAAAAAGA+AGG + chr1_3:64973294-64973313 Msa0133630:CDS 40.0%
! AAAAGAAGGAGTACATGGAG+AGG + chr1_3:64973308-64973327 Msa0133630:CDS 40.0%
ATGGAGAGGAAAAAACTGCA+AGG + chr1_3:64973322-64973341 Msa0133630:CDS 40.0%
AGGTGAAGTCAAAACTAACG+GGG + chr1_3:64973522-64973541 Msa0133630:CDS 40.0%
! GGTTTCAAGTGTATCGTTCT+TGG - chr1_3:64973557-64973576 None:intergenic 40.0%
TCTGTTGAGGGTTCTGTTAT+CGG - chr1_3:64973601-64973620 None:intergenic 40.0%
CTTCTGTTCTGCAACTATTG+GGG - chr1_3:64973656-64973675 None:intergenic 40.0%
! AGGAAAAGGAAGTGTGAAGT+GGG + chr1_3:64973700-64973719 Msa0133630:CDS 40.0%
AATTGCTGAAACCTCAGTTC+AGG + chr1_3:64973732-64973751 Msa0133630:CDS 40.0%
ATTGCTGAAACCTCAGTTCA+GGG + chr1_3:64973733-64973752 Msa0133630:CDS 40.0%
AATGCTCCCAATGATCAACA+TGG + chr1_3:64973778-64973797 Msa0133630:CDS 40.0%
ATGCTCCCAATGATCAACAT+GGG + chr1_3:64973779-64973798 Msa0133630:CDS 40.0%
CTTTGCCCATGTTGATCATT+GGG - chr1_3:64973787-64973806 None:intergenic 40.0%
ACTTTGCCCATGTTGATCAT+TGG - chr1_3:64973788-64973807 None:intergenic 40.0%
TCAACATGGGCAAAGTTCTA+TGG + chr1_3:64973792-64973811 Msa0133630:CDS 40.0%
GAATCAACTTCAAACTTGGG+CGG - chr1_3:64973958-64973977 None:intergenic 40.0%
!! CTTGGCTTTTGCAGTTATGT+TGG + chr1_3:64974029-64974048 Msa0133630:intron 40.0%
GCATTGTTGTATGGTGTGAT+TGG - chr1_3:64974068-64974087 None:intergenic 40.0%
TAAATCTCTCTCCAAGGATG+AGG + chr1_3:64974096-64974115 Msa0133630:CDS 40.0%
!! GAGGAAGTTTGCTTCTTTTG+TGG + chr1_3:64974115-64974134 Msa0133630:CDS 40.0%
!! GGAAGTTTGCTTCTTTTGTG+GGG + chr1_3:64974117-64974136 Msa0133630:CDS 40.0%
! TGCTTCTTTTGTGGGGAAAT+CGG + chr1_3:64974124-64974143 Msa0133630:CDS 40.0%
TAATGCTACAGCACAATAGC+AGG - chr1_3:64974624-64974643 None:intergenic 40.0%
ATTTCTGCGTTTGATTGGAC+GGG + chr1_3:64974758-64974777 Msa0133630:intron 40.0%
CTAATAAAATCCCCTTGTGG+AGG - chr1_3:64975105-64975124 None:intergenic 40.0%
GCAACAGAATATGACTGACT+CGG - chr1_3:64975196-64975215 None:intergenic 40.0%
TTGGATCATGGCAATTTCCA+GGG - chr1_3:64975540-64975559 None:intergenic 40.0%
TTTGGATCATGGCAATTTCC+AGG - chr1_3:64975541-64975560 None:intergenic 40.0%
TGGAAATTGCCATGATCCAA+AGG + chr1_3:64975540-64975559 Msa0133630:CDS 40.0%
CAGATCCGTAAAAAGAAACG+GGG - chr1_3:64975602-64975621 None:intergenic 40.0%
GCAGATCCGTAAAAAGAAAC+GGG - chr1_3:64975603-64975622 None:intergenic 40.0%
GTCCATGATTGTCAAATGGT+TGG + chr1_3:64975841-64975860 Msa0133630:intron 40.0%
AAGGCAGGTTCTACTATAGA+TGG + chr1_3:64975881-64975900 Msa0133630:intron 40.0%
AGACACATTTGTGAGCAACT+TGG - chr1_3:64976275-64976294 None:intergenic 40.0%
! AGTGCTGAAGCTATAACTGT+GGG + chr1_3:64976503-64976522 Msa0133630:intron 40.0%
AAGCTATAACTGTGGGAGAA+GGG + chr1_3:64976510-64976529 Msa0133630:intron 40.0%
! CAACGAGTTTGCCTTTAAAG+TGG + chr1_3:64976746-64976765 Msa0133630:intron 40.0%
!! CTCAGCTGATTTGAGCTAAA+GGG + chr1_3:64976778-64976797 Msa0133630:intron 40.0%
GAGCTAAAGGGAAAAAGAGT+TGG + chr1_3:64976790-64976809 Msa0133630:intron 40.0%
CTAAAGGGAAAAAGAGTTGG+AGG + chr1_3:64976793-64976812 Msa0133630:intron 40.0%
GTTTGAACGATTGTGGTCAA+AGG - chr1_3:64976830-64976849 None:intergenic 40.0%
!! GCACTAATTTGCTTGCTTGT+AGG - chr1_3:64977330-64977349 None:intergenic 40.0%
ACGGAGAGCAAGAGAATTTA+GGG - chr1_3:64977461-64977480 None:intergenic 40.0%
AACGGAGAGCAAGAGAATTT+AGG - chr1_3:64977462-64977481 None:intergenic 40.0%
GCTTTATGAAGGGGAAGAAA+TGG + chr1_3:64977845-64977864 Msa0133630:intron 40.0%
!! TAGCGAGCATATTGATTCAC+TGG + chr1_3:64977948-64977967 Msa0133630:intron 40.0%
GAAGTGGTACTAGAGAAACT+TGG + chr1_3:64978374-64978393 Msa0133630:CDS 40.0%
AAGTCCTCATAGGTTTCTTC+TGG - chr1_3:64978404-64978423 None:intergenic 40.0%
ACATGCACTAAAGTCCTCAT+AGG - chr1_3:64978414-64978433 None:intergenic 40.0%
! TTTCATGCAGTTTTCAGCAG+TGG - chr1_3:64978483-64978502 None:intergenic 40.0%
CTTCTTCTTTCGTATGGGTA+TGG + chr1_3:64978562-64978581 Msa0133630:intron 40.0%
AGTATTCGTTGAGTCGAGAT+CGG - chr1_3:64978766-64978785 None:intergenic 40.0%
! CTTTTGAGCATACAAAGACG+CGG + chr1_3:64978894-64978913 Msa0133630:intron 40.0%
TAGGTCTCCGGATATATCAA+AGG + chr1_3:64979090-64979109 Msa0133630:intron 40.0%
AGATTCAAGAGGGAACTTGA+TGG + chr1_3:64979148-64979167 Msa0133630:CDS 40.0%
ACTCTGCAACAGTTCCTTTG+CGG - chr1_3:64963540-64963559 None:intergenic 45.0%
!! GGATTGGCTGCTGTGAAATT+AGG - chr1_3:64963577-64963596 None:intergenic 45.0%
CAGCAGCCAATCCACAAAAA+TGG + chr1_3:64963584-64963603 Msa0133630:exon 45.0%
!! GGCTCACCATTTTTGTGGAT+TGG - chr1_3:64963593-64963612 None:intergenic 45.0%
TCTTAGCGAGTCGTTGTCTT+TGG - chr1_3:64963614-64963633 None:intergenic 45.0%
! TTCGACTTTGGGGAAGAGTT+CGG - chr1_3:64963658-64963677 None:intergenic 45.0%
TTTCATACCGGGAACACGAA+GGG - chr1_3:64963775-64963794 None:intergenic 45.0%
CAAATATAACAGCTCTCGCC+GGG - chr1_3:64963798-64963817 None:intergenic 45.0%
GCAAATATAACAGCTCTCGC+CGG - chr1_3:64963799-64963818 None:intergenic 45.0%
GAGGACAGAATTTAGCGATG+TGG - chr1_3:64963833-64963852 None:intergenic 45.0%
!! TCCTGATGGTGGTTCTAAAG+AGG + chr1_3:64963923-64963942 Msa0133630:CDS 45.0%
!! TCCTCTTTAGAACCACCATC+AGG - chr1_3:64963927-64963946 None:intergenic 45.0%
TAACTGTCCTCATCCTCTTC+AGG + chr1_3:64963992-64964011 Msa0133630:CDS 45.0%
!! ATGTGGTGGTGTCACACATT+TGG + chr1_3:64964207-64964226 Msa0133630:CDS 45.0%
!! TGGTGTCACACATTTGGCAA+GGG + chr1_3:64964213-64964232 Msa0133630:CDS 45.0%
GCAAGGGATTGTCCTGATAA+AGG + chr1_3:64964229-64964248 Msa0133630:CDS 45.0%
TGTCCTGATAAAGGGCAGAA+TGG + chr1_3:64964238-64964257 Msa0133630:CDS 45.0%
!! TTTGGTGATGGTCGTCCTAA+AGG + chr1_3:64964262-64964281 Msa0133630:CDS 45.0%
!! TTGGTGATGGTCGTCCTAAA+GGG + chr1_3:64964263-64964282 Msa0133630:CDS 45.0%
CAGTTATGAACAGGCCCTTT+AGG - chr1_3:64964280-64964299 None:intergenic 45.0%
CAACATGACACCAATGCATG+TGG - chr1_3:64964437-64964456 None:intergenic 45.0%
!! CACATGCATTGGTGTCATGT+TGG + chr1_3:64964435-64964454 Msa0133630:intron 45.0%
! GGTCGATGCTAGTACTGTTT+TGG + chr1_3:64964527-64964546 Msa0133630:intron 45.0%
ATGCAGATACTCATACGTGC+AGG - chr1_3:64964705-64964724 None:intergenic 45.0%
ACTGTTACCACTTCTCTCGA+TGG - chr1_3:64964904-64964923 None:intergenic 45.0%
GTAACAGTGTCCGCTATTAG+TGG + chr1_3:64964916-64964935 Msa0133630:intron 45.0%
AAATTGCAACAGTGGGTAGC+GGG - chr1_3:64964959-64964978 None:intergenic 45.0%
CAAATTGCAACAGTGGGTAG+CGG - chr1_3:64964960-64964979 None:intergenic 45.0%
TTTGTGTGTGTGTGTGTGTG+TGG + chr1_3:64964976-64964995 Msa0133630:intron 45.0%
TTGTGTGTGTGTGTGTGTGT+GGG + chr1_3:64964977-64964996 Msa0133630:intron 45.0%
ATACTTTCGCGCACTTTGAG+TGG + chr1_3:64965074-64965093 Msa0133630:intron 45.0%
TACACTGAGTGGCCTAATCT+TGG + chr1_3:64965308-64965327 Msa0133630:intron 45.0%
! AAGTGCTGCCAATTGTGGAA+TGG - chr1_3:64965547-64965566 None:intergenic 45.0%
! ACAACAAGTGCTGCCAATTG+TGG - chr1_3:64965552-64965571 None:intergenic 45.0%
GGGATTCAACATAGCGAATC+AGG - chr1_3:64965656-64965675 None:intergenic 45.0%
TGATTCTCATTGCGAAGCGT+AGG - chr1_3:64965905-64965924 None:intergenic 45.0%
TGGCAAGTCTAGCTGGATAA+GGG + chr1_3:64966061-64966080 Msa0133630:intron 45.0%
!! AGTTGATAATCACGAGGACG+TGG + chr1_3:64966214-64966233 Msa0133630:intron 45.0%
CTTCAACTCGTGTATGGCAT+GGG - chr1_3:64966456-64966475 None:intergenic 45.0%
ACTTCAACTCGTGTATGGCA+TGG - chr1_3:64966457-64966476 None:intergenic 45.0%
TATCTGTGGCCTTTCTTCCT+CGG + chr1_3:64966576-64966595 Msa0133630:intron 45.0%
! TTTAAGACCGGAGGGAGTAT+TGG - chr1_3:64967757-64967776 None:intergenic 45.0%
ACCGGAGGGAGTAGTTAATA+AGG + chr1_3:64967894-64967913 Msa0133630:intron 45.0%
! TCAAAGGCATAGAGTGCTTG+TGG - chr1_3:64968324-64968343 None:intergenic 45.0%
AAGCACTCTATGCCTTTGAC+TGG + chr1_3:64968325-64968344 Msa0133630:intron 45.0%
AGCACTCTATGCCTTTGACT+GGG + chr1_3:64968326-64968345 Msa0133630:intron 45.0%
TAGCTCGAGATCTACTTGAG+TGG + chr1_3:64968557-64968576 Msa0133630:intron 45.0%
AATGTGTGGTCCAGATGCAA+TGG - chr1_3:64969501-64969520 None:intergenic 45.0%
CTAGCCCTAACTATAGGTAG+TGG - chr1_3:64969721-64969740 None:intergenic 45.0%
! ATTTTACAGGGCACAGGAGA+AGG - chr1_3:64969774-64969793 None:intergenic 45.0%
!! GGGTTTTCAGGCTACTTGAT+CGG - chr1_3:64970214-64970233 None:intergenic 45.0%
!! CCTTGAAAAAGGGTGTTTCG+GGG + chr1_3:64970385-64970404 Msa0133630:intron 45.0%
!! CTTGAAAAAGGGTGTTTCGG+GGG + chr1_3:64970386-64970405 Msa0133630:intron 45.0%
!!! CGGAAACTCAAGGGCATTTT+TGG + chr1_3:64970547-64970566 Msa0133630:intron 45.0%
AATACCCCTAGAAAATGGGC+GGG + chr1_3:64970612-64970631 Msa0133630:intron 45.0%
CGGAATAAAATGGGTGGAGA+TGG - chr1_3:64970689-64970708 None:intergenic 45.0%
AAAATATGGCGCACGAGGAA+AGG - chr1_3:64970735-64970754 None:intergenic 45.0%
GAATACGAAATCCGAACCAG+TGG - chr1_3:64970773-64970792 None:intergenic 45.0%
!! CTGGTTCGGATTTCGTATTC+CGG + chr1_3:64970773-64970792 Msa0133630:intron 45.0%
TCGGATTTCGTATTCCGGAA+TGG + chr1_3:64970778-64970797 Msa0133630:intron 45.0%
ACCAGTAGTTTGGCTATTGG+AGG + chr1_3:64971071-64971090 Msa0133630:intron 45.0%
TCCTCCAATAGCCAAACTAC+TGG - chr1_3:64971075-64971094 None:intergenic 45.0%
GGCCTCGTTGAAAACTTTCA+GGG - chr1_3:64971279-64971298 None:intergenic 45.0%
ACGAGGCCCTTATCTATGAA+AGG + chr1_3:64971291-64971310 Msa0133630:intron 45.0%
! CAACCATGGTTTTCCATCGT+TGG - chr1_3:64971317-64971336 None:intergenic 45.0%
GTTGTAGAAGGAAGAAGAGG+AGG + chr1_3:64971333-64971352 Msa0133630:intron 45.0%
AGGATGGTGTGAGAAATGGT+GGG + chr1_3:64971368-64971387 Msa0133630:intron 45.0%
GGAAGGCTATTTATAGGGAG+GGG + chr1_3:64971395-64971414 Msa0133630:intron 45.0%
! GCACCACACATTTTTGTCAG+TGG - chr1_3:64971491-64971510 None:intergenic 45.0%
TCCAGAATGCATCAGTGTCA+TGG - chr1_3:64971524-64971543 None:intergenic 45.0%
TACAATCCGGAATGCACCTT+TGG + chr1_3:64971547-64971566 Msa0133630:intron 45.0%
ATGGTGAACGAGGGAAAAGT+TGG + chr1_3:64971603-64971622 Msa0133630:intron 45.0%
GAAAAGTTGGCACTTCCTGT+AGG + chr1_3:64971616-64971635 Msa0133630:intron 45.0%
CTGTAGGGCTAAGGATATTC+CGG + chr1_3:64971632-64971651 Msa0133630:intron 45.0%
ACCGTCCAAACCCACATTAA+TGG - chr1_3:64971705-64971724 None:intergenic 45.0%
AGAGGTGAAGTGAAGAATGG+AGG - chr1_3:64971814-64971833 None:intergenic 45.0%
ACAGGCTGAAATGCTATTGC+AGG - chr1_3:64971918-64971937 None:intergenic 45.0%
CAATAGCATTTCAGCCTGTG+TGG + chr1_3:64971919-64971938 Msa0133630:intron 45.0%
ATAGCATTTCAGCCTGTGTG+GGG + chr1_3:64971921-64971940 Msa0133630:intron 45.0%
CCTGTGTGGGGTTCATATAA+CGG + chr1_3:64971933-64971952 Msa0133630:intron 45.0%
TTCGGTGAAGCAAATGCTTC+TGG - chr1_3:64972686-64972705 None:intergenic 45.0%
ATACCTGAGGCTGAGGATTA+GGG - chr1_3:64972793-64972812 None:intergenic 45.0%
AAGGGTTCAGAACATACCTG+AGG - chr1_3:64972806-64972825 None:intergenic 45.0%
GATTGGGGCAACTACTACTA+AGG - chr1_3:64972825-64972844 None:intergenic 45.0%
!! TTCTTTCCTAGCTCTAACGC+AGG - chr1_3:64972974-64972993 None:intergenic 45.0%
!!! TCTAGCTCTAAAGCGGGTTT+TGG - chr1_3:64973004-64973023 None:intergenic 45.0%
GCGATTGCTTTGTCAATCAG+AGG - chr1_3:64973214-64973233 None:intergenic 45.0%
GCTTAGATGAACTGGAAGAG+AGG + chr1_3:64973254-64973273 Msa0133630:CDS 45.0%
CATGGAGAGGAAAAAACTGC+AGG + chr1_3:64973321-64973340 Msa0133630:CDS 45.0%
GGGTGAAGTCAAAACTAACG+GGG + chr1_3:64973342-64973361 Msa0133630:CDS 45.0%
TGAAGTCAAAACTAACGGGG+AGG + chr1_3:64973345-64973364 Msa0133630:CDS 45.0%
TACAGACCCGTCTGTTGTAA+TGG + chr1_3:64973390-64973409 Msa0133630:CDS 45.0%
GAGTGTCCATTACAACAGAC+GGG - chr1_3:64973399-64973418 None:intergenic 45.0%
TTCCAGATCTGTGACTATCG+GGG - chr1_3:64973431-64973450 None:intergenic 45.0%
CTTCCAGATCTGTGACTATC+GGG - chr1_3:64973432-64973451 None:intergenic 45.0%
TAGTCACAGATCTGGAAGAG+AGG + chr1_3:64973434-64973453 Msa0133630:CDS 45.0%
GTCAAAAGGTCTCTGAGCTA+GGG - chr1_3:64973578-64973597 None:intergenic 45.0%
GGTTCTGTTATCGGGTCAAA+AGG - chr1_3:64973592-64973611 None:intergenic 45.0%
CTGTTGAGGGTTCTGTTATC+GGG - chr1_3:64973600-64973619 None:intergenic 45.0%
TGAGTGTCCATTACAACAGC+CGG - chr1_3:64973625-64973644 None:intergenic 45.0%
! GAGGAAAAGGAAGTGTGAAG+TGG + chr1_3:64973699-64973718 Msa0133630:CDS 45.0%
ACCTCAGTTCAGGGAACTAA+AGG + chr1_3:64973742-64973761 Msa0133630:CDS 45.0%
! TCCTTTAGTTCCCTGAACTG+AGG - chr1_3:64973746-64973765 None:intergenic 45.0%
!! GTATGGTGTGATTGGTCTCT+CGG - chr1_3:64974060-64974079 None:intergenic 45.0%
GAAGCAAACTTCCTCATCCT+TGG - chr1_3:64974110-64974129 None:intergenic 45.0%
! GCTTCTTTTGTGGGGAAATC+GGG + chr1_3:64974125-64974144 Msa0133630:CDS 45.0%
CAGTTATCAATCCCGGATAG+TGG - chr1_3:64974667-64974686 None:intergenic 45.0%
GGACAGTAGCTCTTTCGAAA+TGG + chr1_3:64974955-64974974 Msa0133630:intron 45.0%
! CTGCAAGTCTCTTTGATAGC+TGG + chr1_3:64975619-64975638 Msa0133630:intron 45.0%
GGAATTTGGACACATGAGCA+AGG + chr1_3:64975862-64975881 Msa0133630:intron 45.0%
GAGGAGTGAGCTACTACTTT+CGG + chr1_3:64976085-64976104 Msa0133630:intron 45.0%
AGGTGAAACACTCCGATAGA+TGG - chr1_3:64976176-64976195 None:intergenic 45.0%
CGGCAACCCCTACAAATAAT+GGG - chr1_3:64976461-64976480 None:intergenic 45.0%
CCATTATTTGTAGGGGTTGC+CGG + chr1_3:64976459-64976478 Msa0133630:intron 45.0%
CACAGTTATAGCTTCAGCAC+TGG - chr1_3:64976504-64976523 None:intergenic 45.0%
! CAGTGCTGAAGCTATAACTG+TGG + chr1_3:64976502-64976521 Msa0133630:intron 45.0%
GAAGCTATAACTGTGGGAGA+AGG + chr1_3:64976509-64976528 Msa0133630:intron 45.0%
!! GCTCAGCTGATTTGAGCTAA+AGG + chr1_3:64976777-64976796 Msa0133630:intron 45.0%
CGGAGAGCAAGAGAATTTAG+GGG - chr1_3:64977460-64977479 None:intergenic 45.0%
CATTGCCTCTCCCAAAAAGA+AGG + chr1_3:64977498-64977517 Msa0133630:intron 45.0%
!! GAGATCCTTCTTTTTGGGAG+AGG - chr1_3:64977506-64977525 None:intergenic 45.0%
! TTTTAGGCTAACGCAGCATC+TGG + chr1_3:64978260-64978279 Msa0133630:intron 45.0%
GTGGTACTAGAGAAACTTGG+AGG + chr1_3:64978377-64978396 Msa0133630:CDS 45.0%
AGGTCCAGAAGAAACCTATG+AGG + chr1_3:64978397-64978416 Msa0133630:CDS 45.0%
TACACCACATGCATCCAAAG+TGG - chr1_3:64978592-64978611 None:intergenic 45.0%
GTATTCGTTGAGTCGAGATC+GGG - chr1_3:64978765-64978784 None:intergenic 45.0%
CGACTCAACGAATACTGATG+CGG + chr1_3:64978770-64978789 Msa0133630:intron 45.0%
CACCAAGGACAGATTCAAGA+GGG + chr1_3:64979138-64979157 Msa0133630:CDS 45.0%
TTCCCTCTTGAATCTGTCCT+TGG - chr1_3:64979143-64979162 None:intergenic 45.0%
!! AATACAAAATTTAAAAATTA+GGG - chr1_3:64965034-64965053 None:intergenic 5.0%
!! TAATACAAAATTTAAAAATT+AGG - chr1_3:64965035-64965054 None:intergenic 5.0%
!!! AAAAATTCTAATTTTTTTTT+GGG - chr1_3:64968869-64968888 None:intergenic 5.0%
!!! AAAAAATTCTAATTTTTTTT+TGG - chr1_3:64968870-64968889 None:intergenic 5.0%
!!! TTTTTTTACTTAATTTTTTT+TGG + chr1_3:64969214-64969233 Msa0133630:intron 5.0%
!! AAAAAAAAAAACTAAATTTA+AGG + chr1_3:64969390-64969409 Msa0133630:intron 5.0%
!! AAAATTGAAAAAAAAAAATA+TGG - chr1_3:64970749-64970768 None:intergenic 5.0%
! TCGACTTTGGGGAAGAGTTC+GGG - chr1_3:64963657-64963676 None:intergenic 50.0%
! GATGGGTCTTTTGGTGGAGT+GGG - chr1_3:64963681-64963700 None:intergenic 50.0%
!! TGATGGGTCTTTTGGTGGAG+TGG - chr1_3:64963682-64963701 None:intergenic 50.0%
! TCGGGGTTTGGAGTTTGAGT+CGG - chr1_3:64963739-64963758 None:intergenic 50.0%
TCAAACTCCAAACCCCGAAC+CGG + chr1_3:64963741-64963760 Msa0133630:CDS 50.0%
TTCATACCGGGAACACGAAG+GGG - chr1_3:64963774-64963793 None:intergenic 50.0%
GTTTCATACCGGGAACACGA+AGG - chr1_3:64963776-64963795 None:intergenic 50.0%
CGAGCTCAGAATTGTCCTGA+TGG + chr1_3:64963909-64963928 Msa0133630:CDS 50.0%
GCTCAGAATTGTCCTGATGG+TGG + chr1_3:64963912-64963931 Msa0133630:CDS 50.0%
TGTCCTCATCCTCTTCAGGA+AGG + chr1_3:64963996-64964015 Msa0133630:CDS 50.0%
CTCATCCTCTTCAGGAAGGT+GGG + chr1_3:64964000-64964019 Msa0133630:CDS 50.0%
ATAGTCCCACCTTCCTGAAG+AGG - chr1_3:64964008-64964027 None:intergenic 50.0%
!! GTGGTGTCACACATTTGGCA+AGG + chr1_3:64964212-64964231 Msa0133630:CDS 50.0%
!! GGGCAGAATGGATTTGGTGA+TGG + chr1_3:64964250-64964269 Msa0133630:CDS 50.0%
AAGGCCTAACTGCCAGTTAG+AGG + chr1_3:64964608-64964627 Msa0133630:intron 50.0%
AACAGCTCAACTCCACTACC+AGG - chr1_3:64964636-64964655 None:intergenic 50.0%
TGTGGTATAGCAGTGTAGCG+TGG + chr1_3:64964837-64964856 Msa0133630:intron 50.0%
TGTGTGTGTGTGTGTGTGTG+GGG + chr1_3:64964978-64964997 Msa0133630:intron 50.0%
TCAGTACTTTCGGAGCTGCA+TGG - chr1_3:64965972-64965991 None:intergenic 50.0%
CATGAAGTGGCAAGTCTAGC+TGG + chr1_3:64966054-64966073 Msa0133630:intron 50.0%
GTGGCAAGTCTAGCTGGATA+AGG + chr1_3:64966060-64966079 Msa0133630:intron 50.0%
ATCTGTGGCCTTTCTTCCTC+GGG + chr1_3:64966577-64966596 Msa0133630:intron 50.0%
! CAGTACTGAGAACCGACGAA+AGG + chr1_3:64966796-64966815 Msa0133630:intron 50.0%
GGAGATTGCAATGCATGGCA+GGG - chr1_3:64967202-64967221 None:intergenic 50.0%
AGGAGATTGCAATGCATGGC+AGG - chr1_3:64967203-64967222 None:intergenic 50.0%
GGAGGGACCAAAAGTGAAGA+TGG + chr1_3:64969065-64969084 Msa0133630:intron 50.0%
TGTCACCGTACCATTGCATC+TGG + chr1_3:64969488-64969507 Msa0133630:intron 50.0%
GTGGTCCAGATGCAATGGTA+CGG - chr1_3:64969496-64969515 None:intergenic 50.0%
ACAGGAGAAGGTCATAGGGT+GGG - chr1_3:64969762-64969781 None:intergenic 50.0%
CCGTAGAAGGGACTTCTTAC+GGG - chr1_3:64970139-64970158 None:intergenic 50.0%
CCCGTAAGAAGTCCCTTCTA+CGG + chr1_3:64970136-64970155 Msa0133630:intron 50.0%
CCCGTAGAAGGGACTTCTTA+CGG - chr1_3:64970140-64970159 None:intergenic 50.0%
CCGTAAGAAGTCCCTTCTAC+GGG + chr1_3:64970137-64970156 Msa0133630:intron 50.0%
AGACCATGACTCCCGTAGAA+GGG - chr1_3:64970151-64970170 None:intergenic 50.0%
TAGACCATGACTCCCGTAGA+AGG - chr1_3:64970152-64970171 None:intergenic 50.0%
!! CCCCGAAACACCCTTTTTCA+AGG - chr1_3:64970388-64970407 None:intergenic 50.0%
TGGAAAAAATAGGGCTCGCG+AGG + chr1_3:64970567-64970586 Msa0133630:intron 50.0%
! TGAACCCGCCCATTTTCTAG+GGG - chr1_3:64970619-64970638 None:intergenic 50.0%
! CTGAACCCGCCCATTTTCTA+GGG - chr1_3:64970620-64970639 None:intergenic 50.0%
GGGCCATTGTATGGCAAATG+TGG - chr1_3:64970668-64970687 None:intergenic 50.0%
TATTGGAGGAAAACCGGAGG+AGG + chr1_3:64971085-64971104 Msa0133630:intron 50.0%
GAAAACAATGTCCCTGAGGG+AGG + chr1_3:64971131-64971150 Msa0133630:intron 50.0%
GGTTCATCTGAGGGTCATGT+GGG - chr1_3:64971209-64971228 None:intergenic 50.0%
ACGAAGTGCGGTTCATCTGA+GGG - chr1_3:64971218-64971237 None:intergenic 50.0%
AACGAAGTGCGGTTCATCTG+AGG - chr1_3:64971219-64971238 None:intergenic 50.0%
GGGCCTCGTTGAAAACTTTC+AGG - chr1_3:64971280-64971299 None:intergenic 50.0%
AGGCCAACGATGGAAAACCA+TGG + chr1_3:64971311-64971330 Msa0133630:intron 50.0%
AGAAGGAAGAAGAGGAGGAG+AGG + chr1_3:64971338-64971357 Msa0133630:intron 50.0%
GAAGGAAGAAGAGGAGGAGA+GGG + chr1_3:64971339-64971358 Msa0133630:intron 50.0%
GGAGAGGATGGTGTGAGAAA+TGG + chr1_3:64971364-64971383 Msa0133630:intron 50.0%
GAGGATGGTGTGAGAAATGG+TGG + chr1_3:64971367-64971386 Msa0133630:intron 50.0%
GGATGGTGTGAGAAATGGTG+GGG + chr1_3:64971369-64971388 Msa0133630:intron 50.0%
! GTGTGAGAAATGGTGGGGTT+TGG + chr1_3:64971374-64971393 Msa0133630:intron 50.0%
! GAGAAATGGTGGGGTTTGGA+AGG + chr1_3:64971378-64971397 Msa0133630:intron 50.0%
GGCTATTTATAGGGAGGGGT+AGG + chr1_3:64971399-64971418 Msa0133630:intron 50.0%
AGGGAGGGGTAGGTCAAAAA+CGG + chr1_3:64971409-64971428 Msa0133630:intron 50.0%
AGGGGTAGGTCAAAAACGGT+TGG + chr1_3:64971413-64971432 Msa0133630:intron 50.0%
GGGGTAGGTCAAAAACGGTT+GGG + chr1_3:64971414-64971433 Msa0133630:intron 50.0%
GTAGGTCAAAAACGGTTGGG+AGG + chr1_3:64971417-64971436 Msa0133630:intron 50.0%
AAATGTGTGGTGCAGACCAC+CGG + chr1_3:64971498-64971517 Msa0133630:intron 50.0%
GAATGCATCAGTGTCATGGC+CGG - chr1_3:64971520-64971539 None:intergenic 50.0%
GCCATGACACTGATGCATTC+TGG + chr1_3:64971520-64971539 Msa0133630:intron 50.0%
! CGGAAACCAAAGGTGCATTC+CGG - chr1_3:64971556-64971575 None:intergenic 50.0%
! CGGAATGCACCTTTGGTTTC+CGG + chr1_3:64971554-64971573 Msa0133630:intron 50.0%
CGGAATATCCTTAGCCCTAC+AGG - chr1_3:64971634-64971653 None:intergenic 50.0%
CCGTTATATGAACCCCACAC+AGG - chr1_3:64971936-64971955 None:intergenic 50.0%
ACCAAAACGCGCACAACATC+TGG + chr1_3:64971987-64972006 Msa0133630:intron 50.0%
! ACCAGATGTTGTGCGCGTTT+TGG - chr1_3:64971991-64972010 None:intergenic 50.0%
AACGCGCACAACATCTGGTT+CGG + chr1_3:64971992-64972011 Msa0133630:intron 50.0%
!! AGTTCGAGTGAGTTTTCGGG+TGG + chr1_3:64972158-64972177 Msa0133630:intron 50.0%
CTACGATTGCGGCGAAATAG+TGG - chr1_3:64972594-64972613 None:intergenic 50.0%
AAACCCTAATCCTCAGCCTC+AGG + chr1_3:64972787-64972806 Msa0133630:CDS 50.0%
CATACCTGAGGCTGAGGATT+AGG - chr1_3:64972794-64972813 None:intergenic 50.0%
TCAGAACATACCTGAGGCTG+AGG - chr1_3:64972800-64972819 None:intergenic 50.0%
!!! CCTAGCTCTAACGCAGGTTT+TGG - chr1_3:64972968-64972987 None:intergenic 50.0%
CCAAAACCTGCGTTAGAGCT+AGG + chr1_3:64972965-64972984 Msa0133630:CDS 50.0%
!!! TCTAGCTCTAACGCGGGTTT+TGG - chr1_3:64973040-64973059 None:intergenic 50.0%
GTCTGTAGAGGGTTCGTTCT+TGG - chr1_3:64973377-64973396 None:intergenic 50.0%
ACAACAGACGGGTCTGTAGA+GGG - chr1_3:64973388-64973407 None:intergenic 50.0%
TACAACAGACGGGTCTGTAG+AGG - chr1_3:64973389-64973408 None:intergenic 50.0%
AACCCCGATAGTCACAGATC+TGG + chr1_3:64973426-64973445 Msa0133630:CDS 50.0%
GGTCAAAAGGTCTCTGAGCT+AGG - chr1_3:64973579-64973598 None:intergenic 50.0%
AACAGAACCCTCAACAGACC+CGG + chr1_3:64973603-64973622 Msa0133630:CDS 50.0%
AACAGACCCGGCTGTTGTAA+TGG + chr1_3:64973615-64973634 Msa0133630:CDS 50.0%
GAGTGTCCATTACAACAGCC+GGG - chr1_3:64973624-64973643 None:intergenic 50.0%
CTGCAACTATTGGGGTTGCA+GGG - chr1_3:64973648-64973667 None:intergenic 50.0%
TCTGCAACTATTGGGGTTGC+AGG - chr1_3:64973649-64973668 None:intergenic 50.0%
TACAGCACAATAGCAGGTGC+AGG - chr1_3:64974618-64974637 None:intergenic 50.0%
AAGAGGCTACTTCCTCCACA+AGG + chr1_3:64975090-64975109 Msa0133630:CDS 50.0%
AGAGGCTACTTCCTCCACAA+GGG + chr1_3:64975091-64975110 Msa0133630:CDS 50.0%
CACTTCAGCTATAACTGCCC+TGG + chr1_3:64975520-64975539 Msa0133630:CDS 50.0%
TTTGGACACATGAGCAAGGC+AGG + chr1_3:64975866-64975885 Msa0133630:intron 50.0%
GAGGCAGCATCAATCGTTGT+TGG - chr1_3:64975942-64975961 None:intergenic 50.0%
CGATTGATGCTGCCTCTCAA+AGG + chr1_3:64975946-64975965 Msa0133630:intron 50.0%
GTCCACCATGAGCCATCTAT+CGG + chr1_3:64976161-64976180 Msa0133630:intron 50.0%
ACACTCCGATAGATGGCTCA+TGG - chr1_3:64976169-64976188 None:intergenic 50.0%
CCGGCAACCCCTACAAATAA+TGG - chr1_3:64976462-64976481 None:intergenic 50.0%
TTATTTGTAGGGGTTGCCGG+TGG + chr1_3:64976462-64976481 Msa0133630:intron 50.0%
ACCATGCTTTCAGCTTCCAC+CGG - chr1_3:64976481-64976500 None:intergenic 50.0%
!! CGGTTGATGGAGAAAGCCAA+CGG - chr1_3:64977586-64977605 None:intergenic 50.0%
TACCATGTTGTCGCGGTTGA+TGG - chr1_3:64977599-64977618 None:intergenic 50.0%
! GAGAGCATACCATGTTGTCG+CGG - chr1_3:64977606-64977625 None:intergenic 50.0%
GCATAACGACACTCATCAGC+AGG - chr1_3:64978440-64978459 None:intergenic 50.0%
!! ATGGGTATGGTGTGCCACTT+TGG + chr1_3:64978575-64978594 Msa0133630:intron 50.0%
!! TGTGCCACTTTGGATGCATG+TGG + chr1_3:64978585-64978604 Msa0133630:intron 50.0%
CTCAACGAATACTGATGCGG+TGG + chr1_3:64978773-64978792 Msa0133630:intron 50.0%
GATGGTCTATGCTAGCACCA+AGG + chr1_3:64979123-64979142 Msa0133630:CDS 50.0%
GCACCAAGGACAGATTCAAG+AGG + chr1_3:64979137-64979156 Msa0133630:CDS 50.0%
! CGACTTTGGGGAAGAGTTCG+GGG - chr1_3:64963656-64963675 None:intergenic 55.0%
! GTGGAGTGGGTTCGACTTTG+GGG - chr1_3:64963668-64963687 None:intergenic 55.0%
! GGTGGAGTGGGTTCGACTTT+GGG - chr1_3:64963669-64963688 None:intergenic 55.0%
! TGGTGGAGTGGGTTCGACTT+TGG - chr1_3:64963670-64963689 None:intergenic 55.0%
! CGGGGTTTGGAGTTTGAGTC+GGG - chr1_3:64963738-64963757 None:intergenic 55.0%
!!! AACACGAAGGGGGCGTTTTC+CGG - chr1_3:64963763-64963782 None:intergenic 55.0%
TCATACCGGGAACACGAAGG+GGG - chr1_3:64963773-64963792 None:intergenic 55.0%
CGTGTTCCCGGTATGAAACC+CGG + chr1_3:64963777-64963796 Msa0133630:CDS 55.0%
CCACCTTCCTGAAGAGGATG+AGG - chr1_3:64964002-64964021 None:intergenic 55.0%
CCTCATCCTCTTCAGGAAGG+TGG + chr1_3:64963999-64964018 Msa0133630:CDS 55.0%
GGCGTGCTATCGACAAGCTA+TGG + chr1_3:64964548-64964567 Msa0133630:intron 55.0%
GGAGCCTCTAACTGGCAGTT+AGG - chr1_3:64964615-64964634 None:intergenic 55.0%
AACTGCCAGTTAGAGGCTCC+TGG + chr1_3:64964615-64964634 Msa0133630:intron 55.0%
CACTACCAGGAGCCTCTAAC+TGG - chr1_3:64964623-64964642 None:intergenic 55.0%
CAGTTAGAGGCTCCTGGTAG+TGG + chr1_3:64964621-64964640 Msa0133630:intron 55.0%
TTCTCTCGATGGCGCTTCAC+AGG - chr1_3:64964893-64964912 None:intergenic 55.0%
! TGAAGCGCCATCGAGAGAAG+TGG + chr1_3:64964894-64964913 Msa0133630:intron 55.0%
GTGTGTGTGTGTGTGTGTGG+GGG + chr1_3:64964979-64964998 Msa0133630:intron 55.0%
TGTGTGTGTGTGTGTGTGGG+GGG + chr1_3:64964980-64964999 Msa0133630:intron 55.0%
ACAATAGCGCTCATCCCGCT+AGG + chr1_3:64965429-64965448 Msa0133630:intron 55.0%
CAATAGCGCTCATCCCGCTA+GGG + chr1_3:64965430-64965449 Msa0133630:intron 55.0%
ATCTCAGGCCCGAGGAAGAA+AGG - chr1_3:64966588-64966607 None:intergenic 55.0%
ACGGAAAAATCTCAGGCCCG+AGG - chr1_3:64966596-64966615 None:intergenic 55.0%
! ATGTCACCAAAGTGCCACCC+CGG - chr1_3:64969465-64969484 None:intergenic 55.0%
CACAGGAGAAGGTCATAGGG+TGG - chr1_3:64969763-64969782 None:intergenic 55.0%
GGGCACAGGAGAAGGTCATA+GGG - chr1_3:64969766-64969785 None:intergenic 55.0%
AGGGCACAGGAGAAGGTCAT+AGG - chr1_3:64969767-64969786 None:intergenic 55.0%
AGTCCCTTCTACGGGAGTCA+TGG + chr1_3:64970145-64970164 Msa0133630:intron 55.0%
!! AAGGGTGTTTCGGGGGTTTC+CGG + chr1_3:64970393-64970412 Msa0133630:intron 55.0%
GGCGCGTTGCATGAAGATTC+CGG - chr1_3:64970429-64970448 None:intergenic 55.0%
! GCTGAACCCGCCCATTTTCT+AGG - chr1_3:64970621-64970640 None:intergenic 55.0%
GGTGGAGATGGGCCATTGTA+TGG - chr1_3:64970677-64970696 None:intergenic 55.0%
GGCTATTGGAGGAAAACCGG+AGG + chr1_3:64971082-64971101 Msa0133630:intron 55.0%
AACAATGTCCCTGAGGGAGG+TGG + chr1_3:64971134-64971153 Msa0133630:intron 55.0%
ACAATGTCCCTGAGGGAGGT+GGG + chr1_3:64971135-64971154 Msa0133630:intron 55.0%
GGGTGCTCAAACTTACGCCT+AGG + chr1_3:64971158-64971177 Msa0133630:intron 55.0%
GCTCAAACTTACGCCTAGGC+AGG + chr1_3:64971162-64971181 Msa0133630:intron 55.0%
GTTCTTAGCTTCGCCTGCCT+AGG - chr1_3:64971178-64971197 None:intergenic 55.0%
GAGGGTCATGTGGGTCAGTT+TGG - chr1_3:64971200-64971219 None:intergenic 55.0%
CGGTTCATCTGAGGGTCATG+TGG - chr1_3:64971210-64971229 None:intergenic 55.0%
GAAGAAGAGGAGGAGAGGGT+GGG + chr1_3:64971343-64971362 Msa0133630:intron 55.0%
TGGCACTTCCTGTAGGGCTA+AGG + chr1_3:64971623-64971642 Msa0133630:intron 55.0%
!! TAGGGGTGTCGGTGATGTCA+TGG + chr1_3:64971868-64971887 Msa0133630:intron 55.0%
! ATTTTGCAGGACGCGCGAGA+AGG + chr1_3:64972085-64972104 Msa0133630:intron 55.0%
CTGTGACTATCGGGGTTGCA+GGG - chr1_3:64973423-64973442 None:intergenic 55.0%
TCTGTGACTATCGGGGTTGC+AGG - chr1_3:64973424-64973443 None:intergenic 55.0%
ACAACAGCCGGGTCTGTTGA+GGG - chr1_3:64973613-64973632 None:intergenic 55.0%
TACAACAGCCGGGTCTGTTG+AGG - chr1_3:64973614-64973633 None:intergenic 55.0%
GAGGCTACTTCCTCCACAAG+GGG + chr1_3:64975092-64975111 Msa0133630:CDS 55.0%
! CAGGTGGAGGAAGACTTGCT+AGG + chr1_3:64975473-64975492 Msa0133630:intron 55.0%
CTCCGATAGATGGCTCATGG+TGG - chr1_3:64976166-64976185 None:intergenic 55.0%
CTCCATCAACCGCGACAACA+TGG + chr1_3:64977594-64977613 Msa0133630:intron 55.0%
GGCTAACGCAGCATCTGGAA+TGG + chr1_3:64978265-64978284 Msa0133630:intron 55.0%
TTCGTTGAGTCGAGATCGGG+TGG - chr1_3:64978762-64978781 None:intergenic 55.0%
!!! GCGTTTTCCGGTTCGGGGTT+TGG - chr1_3:64963751-64963770 None:intergenic 60.0%
!!! AAGGGGGCGTTTTCCGGTTC+GGG - chr1_3:64963757-64963776 None:intergenic 60.0%
!!! GAAGGGGGCGTTTTCCGGTT+CGG - chr1_3:64963758-64963777 None:intergenic 60.0%
AAACGCCCCCTTCGTGTTCC+CGG + chr1_3:64963765-64963784 Msa0133630:CDS 60.0%
CTCTCGCCGGGTTTCATACC+GGG - chr1_3:64963786-64963805 None:intergenic 60.0%
GCTCTCGCCGGGTTTCATAC+CGG - chr1_3:64963787-64963806 None:intergenic 60.0%
!! TGTTTACGGTGTCGGCGTCG+CGG + chr1_3:64963882-64963901 Msa0133630:CDS 60.0%
GATGGCGCTTCACAGGCCTA+TGG - chr1_3:64964886-64964905 None:intergenic 60.0%
!! TGCAACAGTGGGTAGCGGGA+TGG - chr1_3:64964955-64964974 None:intergenic 60.0%
GTGTGTGTGTGTGTGTGGGG+GGG + chr1_3:64964981-64965000 Msa0133630:intron 60.0%
TGTGTGTGTGTGTGTGGGGG+GGG + chr1_3:64964982-64965001 Msa0133630:intron 60.0%
AGACAGCGGTGAACCCTAGC+GGG - chr1_3:64965446-64965465 None:intergenic 60.0%
CAGACAGCGGTGAACCCTAG+CGG - chr1_3:64965447-64965466 None:intergenic 60.0%
AGAACCGACGAAAGGCCCAG+TGG + chr1_3:64966804-64966823 Msa0133630:CDS 60.0%
CTGACCACTGGGCCTTTCGT+CGG - chr1_3:64966811-64966830 None:intergenic 60.0%
GCATGGCAGGGTCCTAGTGT+AGG - chr1_3:64967190-64967209 None:intergenic 60.0%
! CCAGTCGAGTACAAGGCACC+CGG + chr1_3:64969443-64969462 Msa0133630:intron 60.0%
! CAGTCGAGTACAAGGCACCC+GGG + chr1_3:64969444-64969463 Msa0133630:intron 60.0%
! AGTCGAGTACAAGGCACCCG+GGG + chr1_3:64969445-64969464 Msa0133630:intron 60.0%
! TGTCACCAAAGTGCCACCCC+GGG - chr1_3:64969464-64969483 None:intergenic 60.0%
GGCTCGCGAGGAAACCCATA+GGG + chr1_3:64970579-64970598 Msa0133630:intron 60.0%
! GGCGCACGAGGAAAGGCATA+GGG - chr1_3:64970728-64970747 None:intergenic 60.0%
! TGGCGCACGAGGAAAGGCAT+AGG - chr1_3:64970729-64970748 None:intergenic 60.0%
TGGAGGAAAACCGGAGGAGG+AGG + chr1_3:64971088-64971107 Msa0133630:intron 60.0%
GGAGGAAAACCGGAGGAGGA+GGG + chr1_3:64971089-64971108 Msa0133630:intron 60.0%
CCTTCTCTTCCCTCCTCCTC+CGG - chr1_3:64971101-64971120 None:intergenic 60.0%
CGGAGGAGGAGGGAAGAGAA+GGG + chr1_3:64971099-64971118 Msa0133630:intron 60.0%
AGGAGGAGGGAAGAGAAGGG+CGG + chr1_3:64971102-64971121 Msa0133630:intron 60.0%
CAATGTCCCTGAGGGAGGTG+GGG + chr1_3:64971136-64971155 Msa0133630:intron 60.0%
AATGTCCCTGAGGGAGGTGG+GGG + chr1_3:64971137-64971156 Msa0133630:intron 60.0%
AACCGCACTTCGTTGCAGCG+CGG + chr1_3:64971225-64971244 Msa0133630:intron 60.0%
AACCGCGCTGCAACGAAGTG+CGG - chr1_3:64971230-64971249 None:intergenic 60.0%
GGAAGAAGAGGAGGAGAGGG+TGG + chr1_3:64971342-64971361 Msa0133630:intron 60.0%
TGCATCAGTGTCATGGCCGG+TGG - chr1_3:64971517-64971536 None:intergenic 60.0%
GGGGAAATCGGGCACTCACT+TGG + chr1_3:64974136-64974155 Msa0133630:CDS 60.0%
! TCCCGGATAGTGGCGCATAG+CGG - chr1_3:64974657-64974676 None:intergenic 60.0%
GCCGGTGGAAGCTGAAAGCA+TGG + chr1_3:64976477-64976496 Msa0133630:CDS 60.0%
TCACCACAGCGCAGCCGCAA+AGG + chr1_3:64963523-64963542 Msa0133630:five_prime_UTR 65.0%
GTTCCTTTGCGGCTGCGCTG+TGG - chr1_3:64963529-64963548 None:intergenic 65.0%
!!! AGGGGGCGTTTTCCGGTTCG+GGG - chr1_3:64963756-64963775 None:intergenic 65.0%
GTCCTCCACTGCCACGCCAT+AGG + chr1_3:64964867-64964886 Msa0133630:intron 65.0%
ACAGGCCTATGGCGTGGCAG+TGG - chr1_3:64964875-64964894 None:intergenic 65.0%
CGCTTCACAGGCCTATGGCG+TGG - chr1_3:64964881-64964900 None:intergenic 65.0%
GTGTGTGTGTGTGTGGGGGG+GGG + chr1_3:64964983-64965002 Msa0133630:intron 65.0%
TGTGTGTGTGTGTGGGGGGG+GGG + chr1_3:64964984-64965003 Msa0133630:intron 65.0%
CGACGAAAGGCCCAGTGGTC+AGG + chr1_3:64966809-64966828 Msa0133630:CDS 65.0%
CCGGGTGCCTTGTACTCGAC+TGG - chr1_3:64969446-64969465 None:intergenic 65.0%
GGGCTCGCGAGGAAACCCAT+AGG + chr1_3:64970578-64970597 Msa0133630:intron 65.0%
CCGGAGGAGGAGGGAAGAGA+AGG + chr1_3:64971098-64971117 Msa0133630:intron 65.0%
GGAGGAGGGAAGAGAAGGGC+GGG + chr1_3:64971103-64971122 Msa0133630:intron 65.0%
ATGTCCCTGAGGGAGGTGGG+GGG + chr1_3:64971138-64971157 Msa0133630:intron 65.0%
AGAGGAGGAGAGGGTGGGAG+AGG + chr1_3:64971348-64971367 Msa0133630:intron 65.0%
GAGGAGAGGGTGGGAGAGGA+TGG + chr1_3:64971352-64971371 Msa0133630:intron 65.0%
AGGACGCGCGAGAAGGCAGT+AGG + chr1_3:64972092-64972111 Msa0133630:intron 65.0%
GGACGCGCGAGAAGGCAGTA+GGG + chr1_3:64972093-64972112 Msa0133630:intron 65.0%
GCGCGAGAAGGCAGTAGGGT+GGG + chr1_3:64972097-64972116 Msa0133630:intron 65.0%
GGCCGCTATGCGCCACTATC+CGG + chr1_3:64974652-64974671 Msa0133630:intron 65.0%
GCCGCTATGCGCCACTATCC+GGG + chr1_3:64974653-64974672 Msa0133630:intron 65.0%
GGCCTATGGCGTGGCAGTGG+AGG - chr1_3:64964872-64964891 None:intergenic 70.0%
GTGTGTGTGTGTGGGGGGGG+GGG + chr1_3:64964985-64965004 Msa0133630:intron 70.0%
TGTGTGTGTGTGGGGGGGGG+GGG + chr1_3:64964986-64965005 Msa0133630:intron 70.0%
! CGAGTACAAGGCACCCGGGG+TGG + chr1_3:64969448-64969467 Msa0133630:intron 70.0%
AGGCACCCGGGGTGGCACTT+TGG + chr1_3:64969456-64969475 Msa0133630:intron 70.0%
AGCACCCCCCACCTCCCTCA+GGG - chr1_3:64971145-64971164 None:intergenic 70.0%
CGCGCGAGAAGGCAGTAGGG+TGG + chr1_3:64972096-64972115 Msa0133630:intron 70.0%
GTGTGTGTGTGGGGGGGGGG+GGG + chr1_3:64964987-64965006 Msa0133630:intron 75.0%
TGTGTGTGTGGGGGGGGGGG+GGG + chr1_3:64964988-64965007 Msa0133630:intron 75.0%
GAGCACCCCCCACCTCCCTC+AGG - chr1_3:64971146-64971165 None:intergenic 75.0%
! GTGTGTGTGGGGGGGGGGGG+GGG + chr1_3:64964989-64965008 Msa0133630:intron 80.0%
! TGTGTGTGGGGGGGGGGGGG+GGG + chr1_3:64964990-64965009 Msa0133630:intron 80.0%
! GTGTGTGGGGGGGGGGGGGG+GGG + chr1_3:64964991-64965010 Msa0133630:intron 85.0%
! TGTGTGGGGGGGGGGGGGGG+GGG + chr1_3:64964992-64965011 Msa0133630:intron 85.0%
! GTGTGGGGGGGGGGGGGGGG+GGG + chr1_3:64964993-64965012 Msa0133630:intron 90.0%
! TGTGGGGGGGGGGGGGGGGG+GGG + chr1_3:64964994-64965013 Msa0133630:intron 90.0%
! GTGGGGGGGGGGGGGGGGGG+GGG + chr1_3:64964995-64965014 Msa0133630:intron 95.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + chr1_3:64964996-64965015 Msa0133630:intron 95.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 64963465 64979243 64963465 ID=Msa0133630;Name=Msa0133630
chr1_3 mRNA 64963465 64979243 64963465 ID=Msa0133630-mRNA-1;Parent=Msa0133630;Name=Msa0133630-mRNA-1;_AED=0.16;_eAED=0.16;_QI=138|0.44|0.4|0.9|0.66|0.9|10|0|870
chr1_3 exon 64963465 64964109 64963465 ID=Msa0133630-mRNA-1:exon:21931;Parent=Msa0133630-mRNA-1
chr1_3 exon 64964190 64964298 64964190 ID=Msa0133630-mRNA-1:exon:21932;Parent=Msa0133630-mRNA-1
chr1_3 exon 64966799 64966881 64966799 ID=Msa0133630-mRNA-1:exon:21933;Parent=Msa0133630-mRNA-1
chr1_3 exon 64972650 64973813 64972650 ID=Msa0133630-mRNA-1:exon:21934;Parent=Msa0133630-mRNA-1
chr1_3 exon 64974043 64974181 64974043 ID=Msa0133630-mRNA-1:exon:21935;Parent=Msa0133630-mRNA-1
chr1_3 exon 64975061 64975125 64975061 ID=Msa0133630-mRNA-1:exon:21936;Parent=Msa0133630-mRNA-1
chr1_3 exon 64975476 64975561 64975476 ID=Msa0133630-mRNA-1:exon:21937;Parent=Msa0133630-mRNA-1
chr1_3 exon 64976472 64976520 64976472 ID=Msa0133630-mRNA-1:exon:21938;Parent=Msa0133630-mRNA-1
chr1_3 exon 64978266 64978525 64978266 ID=Msa0133630-mRNA-1:exon:21939;Parent=Msa0133630-mRNA-1
chr1_3 exon 64979093 64979243 64979093 ID=Msa0133630-mRNA-1:exon:21940;Parent=Msa0133630-mRNA-1
chr1_3 five_prime_UTR 64963465 64963602 64963465 ID=Msa0133630-mRNA-1:five_prime_utr;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64963603 64964109 64963603 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64964190 64964298 64964190 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64966799 64966881 64966799 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64972650 64973813 64972650 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64974043 64974181 64974043 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64975061 64975125 64975061 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64975476 64975561 64975476 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64976472 64976520 64976472 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64978266 64978525 64978266 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
chr1_3 CDS 64979093 64979243 64979093 ID=Msa0133630-mRNA-1:cds;Parent=Msa0133630-mRNA-1
Gene Sequence

>Msa0133630

ATGGTGAGCCAAAGACAACGACTCGCTAAGAAACGCTACAAAGAAGAACACCCCGAACTCTTCCCCAAAGTCGAACCCACTCCACCAAAAGACCCATCAAAAAAGAAGAAAAACAAATTCAAGCGCAAAAAACCCGACTCAAACTCCAAACCCCGAACCGGAAAACGCCCCCTTCGTGTTCCCGGTATGAAACCCGGCGAGAGCTGTTATATTTGCAAGGGATTAGACCACATCGCTAAATTCTGTCCTCAAAAAGCTGAATGGGAAAAGAATAAGATATGTTTACGGTGTCGGCGTCGCGGTCATCGAGCTCAGAATTGTCCTGATGGTGGTTCTAAAGAGGATTTTAAGTATTGTTATAATTGTGGTGATAATGGTCACTCTCTTGCTAACTGTCCTCATCCTCTTCAGGAAGGTGGGACTATGTTTGCTCAGTGTTTTGTTTGTAAGGAACAAGGGCATTTGAGTAAAAATTGCCCTAAAAATGCTCATGGCATTTATCCTAAGGGTGGTTGTTGTAAAATATGTGGTGGTGTCACACATTTGGCAAGGGATTGTCCTGATAAAGGGCAGAATGGATTTGGTGATGGTCGTCCTAAAGGGCCTGTTCATAACTTACTGAGAACCGACGAAAGGCCCAGTGGTCAGGTTACCAAATTTGTGAGTGGAGATGATATGGACGACGACTTCACAACAGAACGAATAGAACAAAAAATGCTGAGAGAAGAGAAACCAGAAGCATTTGCTTCACCGAAACAGAATACTGAAGATGATAGCAGTAAGAAGAAGAAGAAGAAGAGGTGTAGATGGAGAAAAAAGAAGGAGAAAATCAATGAAAACCCTAATCCTCAGCCTCAGGTATGTTCTGAACCCTTAGTAGTAGTTGCCCCAATCTCAGAACTCAAATCAAACGAAGAATCTGTTACTTTACCTGATTCAAATAATATCCCCGCGAAAAAGAATAGGAAGAACAGGAATAGGAATAAGAAGAAGAGCATGATCAATGGTGAAGAACCAAAACCTGCGTTAGAGCTAGGAAAGAATGAAGAACCAAAACCCGCTTTAGAGCTAGAAAAGAATGAAGAACCAAAACCCGCGTTAGAGCTAGAAAAGAATAAAGAAGTAGAATCAATTGAAGTTGCAAAAACTATGACTAGGAAGAGAAAACGAAAAAGCGTGCAAAATGGGGCAGAATCCAATGAGCATAATATTGAACAGGCTGAAACTGCGGTTCAGATGTCGATACTAGATACAGAAGTGCCTCTGATTGACAAAGCAATCGCGGTGAATAATCAACATGTAAGCTTAGATGAACTGGAAGAGAGGTACTTTGAGAGAAAAAAGACGAGGAAGGAAAAAAAGAAGGAGTACATGGAGAGGAAAAAACTGCAGGGTGAAGTCAAAACTAACGGGGAGGAAAAAACCAAGAACGAACCCTCTACAGACCCGTCTGTTGTAATGGACACTCACCCTGCAACCCCGATAGTCACAGATCTGGAAGAGAGGTACTTTGAGAGAAAAAAGACGAGGAAGGAAAAAAAGAAGGAGTACATGGAGAGGAAAAAACTGCAAGGTGAAGTCAAAACTAACGGGGAAGAAAAAACCAAGAACGATACACTTGAAACCCTAGCTCAGAGACCTTTTGACCCGATAACAGAACCCTCAACAGACCCGGCTGTTGTAATGGACACTCACCCTGCAACCCCAATAGTTGCAGAACAGAAGATTGCAAAGAAGAAACACAAGAAGAGGAAAAGGAAGTGTGAAGTGGGACAATATTCAATTGCTGAAACCTCAGTTCAGGGAACTAAAGGAATCACTGTCACTAATGCTCCCAATGATCAACATGGGCAAAGTTCTATGTTATGTTGGGCTTGCCGAGAGACCAATCACACCATACAACAATGCCAAAAGCTTAAATCTCTCTCCAAGGATGAGGAAGTTTGCTTCTTTTGTGGGGAAATCGGGCACTCACTTGGAAAATGCTCAGTATATATAGCAGAAGAGTCTTCCCTAAAAAAAAACTGGCAGAAGAGGCTACTTCCTCCACAAGGGGATTTTATTAGAGTGGAGGAAGACTTGCTAGGTGCTTATTTTGTAATGCACACGGGCACTTCAGCTATAACTGCCCTGGAAATTGCCATGATCCAAAGGGGTTGCCGGTGGAAGCTGAAAGCATGGTCCAGTGCTGAAGCTATAACTGCTAACGCAGCATCTGGAATGGCTGTTAATGATGAATGTAAATTGAAGTTTCTTGAGTTAAAAGCAAAGAGAAACTATCGTTTTATTGTGTTTAAGATTGAGAATCAGGAAGTGGTACTAGAGAAACTTGGAGGTCCAGAAGAAACCTATGAGGACTTTAGTGCATGTCTACCTGCTGATGAGTGTCGTTATGCAGTCTTTGATTTTGATTTCACCACTGCTGAAAACTGCATGAAAAGCAAGATTTTCTTCATTGCATGGTCTCCGGATATATCAAAGGTGAGACATAAGATGGTCTATGCTAGCACCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAAGTTGAGTTGCAAGCAACTGATCCTAGTGAAATGAGCTTTGATATCATAAAATCACGTGCACTATAA
Protein sequence

>Msa0133630

MVSQRQRLAKKRYKEEHPELFPKVEPTPPKDPSKKKKNKFKRKKPDSNSKPRTGKRPLRVPGMKPGESCYICKGLDHIAKFCPQKAEWEKNKICLRCRRRGHRAQNCPDGGSKEDFKYCYNCGDNGHSLANCPHPLQEGGTMFAQCFVCKEQGHLSKNCPKNAHGIYPKGGCCKICGGVTHLARDCPDKGQNGFGDGRPKGPVHNLLRTDERPSGQVTKFVSGDDMDDDFTTERIEQKMLREEKPEAFASPKQNTEDDSSKKKKKKRCRWRKKKEKINENPNPQPQVCSEPLVVVAPISELKSNEESVTLPDSNNIPAKKNRKNRNRNKKKSMINGEEPKPALELGKNEEPKPALELEKNEEPKPALELEKNKEVESIEVAKTMTRKRKRKSVQNGAESNEHNIEQAETAVQMSILDTEVPLIDKAIAVNNQHVSLDELEERYFERKKTRKEKKKEYMERKKLQGEVKTNGEEKTKNEPSTDPSVVMDTHPATPIVTDLEERYFERKKTRKEKKKEYMERKKLQGEVKTNGEEKTKNDTLETLAQRPFDPITEPSTDPAVVMDTHPATPIVAEQKIAKKKHKKRKRKCEVGQYSIAETSVQGTKGITVTNAPNDQHGQSSMLCWACRETNHTIQQCQKLKSLSKDEEVCFFCGEIGHSLGKCSVYIAEESSLKKNWQKRLLPPQGDFIRVEEDLLGAYFVMHTGTSAITALEIAMIQRGCRWKLKAWSSAEAITANAASGMAVNDECKLKFLELKAKRNYRFIVFKIENQEVVLEKLGGPEETYEDFSACLPADECRYAVFDFDFTTAENCMKSKIFFIAWSPDISKVRHKMVYASTKDRFKRELDGIQVELQATDPSEMSFDIIKSRAL*