Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679680 | XP_013455749.1 | 86.905 | 336 | 38 | 1 | 1 | 330 | 42 | 377 | 0.0 | 552 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679680 | A0A072UV85 | 86.905 | 336 | 38 | 1 | 1 | 330 | 42 | 377 | 0.0 | 552 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004060 | Msa0679680 | 0.803525 | 3.344389e-49 | -8.615850e-47 |
| Msa0006880 | Msa0679680 | 0.803844 | 2.871623e-49 | -8.615850e-47 |
| Msa0007850 | Msa0679680 | 0.827346 | 1.645540e-54 | -8.615850e-47 |
| Msa0015680 | Msa0679680 | 0.803121 | 4.055598e-49 | -8.615850e-47 |
| Msa0027390 | Msa0679680 | 0.807411 | 5.122334e-50 | -8.615850e-47 |
| Msa0031820 | Msa0679680 | 0.808406 | 3.146404e-50 | -8.615850e-47 |
| Msa0032260 | Msa0679680 | 0.818420 | 1.978391e-52 | -8.615850e-47 |
| Msa0037160 | Msa0679680 | 0.813506 | 2.472697e-51 | -8.615850e-47 |
| Msa0045490 | Msa0679680 | 0.829313 | 5.521202e-55 | -8.615850e-47 |
| Msa0047160 | Msa0679680 | 0.818058 | 2.389969e-52 | -8.615850e-47 |
| Msa0056030 | Msa0679680 | 0.810681 | 1.021570e-50 | -8.615850e-47 |
| Msa0056270 | Msa0679680 | 0.811256 | 7.666469e-51 | -8.615850e-47 |
| Msa0057140 | Msa0679680 | 0.805723 | 1.163235e-49 | -8.615850e-47 |
| Msa0090030 | Msa0679680 | 0.809425 | 1.904505e-50 | -8.615850e-47 |
| Msa0094470 | Msa0679680 | 0.800310 | 1.530247e-48 | -8.615850e-47 |
| Msa0094920 | Msa0679680 | 0.808475 | 3.041116e-50 | -8.615850e-47 |
| Msa0097950 | Msa0679680 | 0.826805 | 2.217690e-54 | -8.615850e-47 |
| Msa0098740 | Msa0679680 | 0.815666 | 8.225994e-52 | -8.615850e-47 |
| Msa0099510 | Msa0679680 | 0.802685 | 4.988898e-49 | -8.615850e-47 |
| Msa0104610 | Msa0679680 | 0.839886 | 1.211772e-57 | -8.615850e-47 |
| Msa0108870 | Msa0679680 | 0.822030 | 2.946233e-53 | -8.615850e-47 |
| Msa0115460 | Msa0679680 | 0.800104 | 1.685748e-48 | -8.615850e-47 |
| Msa0603670 | Msa0679680 | 0.828259 | 9.929495e-55 | -8.615850e-47 |
| Msa0609000 | Msa0679680 | 0.814677 | 1.363704e-51 | -8.615850e-47 |
| Msa0610500 | Msa0679680 | 0.822437 | 2.370667e-53 | -8.615850e-47 |
| Msa0614510 | Msa0679680 | 0.805839 | 1.099826e-49 | -8.615850e-47 |
| Msa0617580 | Msa0679680 | 0.806458 | 8.144951e-50 | -8.615850e-47 |
| Msa0619920 | Msa0679680 | 0.815737 | 7.931726e-52 | -8.615850e-47 |
| Msa0626680 | Msa0679680 | 0.815475 | 9.070184e-52 | -8.615850e-47 |
| Msa0641140 | Msa0679680 | 0.907905 | 3.054743e-81 | -8.615850e-47 |
| Msa0646130 | Msa0679680 | 0.806432 | 8.249696e-50 | -8.615850e-47 |
| Msa0651150 | Msa0679680 | 0.831138 | 1.978470e-55 | -8.615850e-47 |
| Msa0654870 | Msa0679680 | 0.800784 | 1.225111e-48 | -8.615850e-47 |
| Msa0656580 | Msa0679680 | 0.845352 | 4.285974e-59 | -8.615850e-47 |
| Msa0659990 | Msa0679680 | 0.808767 | 2.633999e-50 | -8.615850e-47 |
| Msa0664760 | Msa0679680 | 0.813206 | 2.878227e-51 | -8.615850e-47 |
| Msa0679680 | Msa0694840 | 0.812180 | 4.827604e-51 | -8.615850e-47 |
| Msa0679680 | Msa0695130 | 0.814171 | 1.764763e-51 | -8.615850e-47 |
| Msa0679680 | Msa0706390 | 0.843879 | 1.068136e-58 | -8.615850e-47 |
| Msa0679680 | Msa0744030 | 0.802750 | 4.837402e-49 | -8.615850e-47 |
| Msa0679680 | Msa0744090 | 0.821943 | 3.086036e-53 | -8.615850e-47 |
| Msa0679680 | Msa0744100 | 0.808824 | 2.561511e-50 | -8.615850e-47 |
| Msa0679680 | Msa0750920 | 0.817786 | 2.752447e-52 | -8.615850e-47 |
| Msa0679680 | Msa0756930 | 0.804427 | 2.171859e-49 | -8.615850e-47 |
| Msa0679680 | Msa0774750 | 0.809002 | 2.346270e-50 | -8.615850e-47 |
| Msa0679680 | Msa0781270 | 0.812026 | 5.215692e-51 | -8.615850e-47 |
| Msa0679680 | Msa0788110 | 0.806437 | 8.229539e-50 | -8.615850e-47 |
| Msa0679680 | Msa0795660 | 0.804023 | 2.635754e-49 | -8.615850e-47 |
| Msa0679680 | Msa0796440 | 0.804388 | 2.212938e-49 | -8.615850e-47 |
| Msa0679680 | Msa0802410 | 0.814295 | 1.656517e-51 | -8.615850e-47 |
| Msa0679680 | Msa0814250 | 0.820438 | 6.857260e-53 | -8.615850e-47 |
| Msa0679680 | Msa0814320 | 0.823314 | 1.480854e-53 | -8.615850e-47 |
| Msa0679680 | Msa0819060 | 0.820135 | 8.049219e-53 | -8.615850e-47 |
| Msa0679680 | Msa0825270 | 0.810322 | 1.221244e-50 | -8.615850e-47 |
| Msa0679680 | Msa0825280 | 0.827205 | 1.778715e-54 | -8.615850e-47 |
| Msa0679680 | Msa0844230 | 0.812083 | 5.066785e-51 | -8.615850e-47 |
| Msa0679680 | Msa0850710 | 0.820510 | 6.601686e-53 | -8.615850e-47 |
| Msa0679680 | Msa0851470 | 0.817048 | 4.035859e-52 | -8.615850e-47 |
| Msa0679680 | Msa0859180 | 0.814169 | 1.766794e-51 | -8.615850e-47 |
| Msa0679680 | Msa0863930 | 0.824080 | 9.795143e-54 | -8.615850e-47 |
| Msa0679680 | Msa0881580 | 0.817885 | 2.613841e-52 | -8.615850e-47 |
| Msa0679680 | Msa0888940 | 0.834907 | 2.284969e-56 | -8.615850e-47 |
| Msa0679680 | Msa0897400 | 0.843069 | 1.757761e-58 | -8.615850e-47 |
| Msa0679680 | Msa0899350 | 0.822654 | 2.109910e-53 | -8.615850e-47 |
| Msa0679680 | Msa0901450 | 0.805667 | 1.194893e-49 | -8.615850e-47 |
| Msa0679680 | Msa0906690 | 0.817965 | 2.508001e-52 | -8.615850e-47 |
| Msa0679680 | Msa0939000 | 0.810065 | 1.387392e-50 | -8.615850e-47 |
| Msa0679680 | Msa0945240 | 0.806386 | 8.434860e-50 | -8.615850e-47 |
| Msa0679680 | Msa0959910 | 0.804121 | 2.515190e-49 | -8.615850e-47 |
| Msa0679680 | Msa0963020 | 0.834094 | 3.655049e-56 | -8.615850e-47 |
| Msa0679680 | Msa0980940 | 0.848592 | 5.555449e-60 | -8.615850e-47 |
| Msa0679680 | Msa0990590 | 0.805841 | 1.098853e-49 | -8.615850e-47 |
| Msa0679680 | Msa0997430 | 0.813821 | 2.108219e-51 | -8.615850e-47 |
| Msa0679680 | Msa1001350 | 0.824000 | 1.023121e-53 | -8.615850e-47 |
| Msa0679680 | Msa1004420 | 0.801470 | 8.870470e-49 | -8.615850e-47 |
| Msa0679680 | Msa1014420 | 0.825056 | 5.770993e-54 | -8.615850e-47 |
| Msa0679680 | Msa1017510 | 0.820867 | 5.467347e-53 | -8.615850e-47 |
| Msa0679680 | Msa1025260 | 0.827999 | 1.147080e-54 | -8.615850e-47 |
| Msa0679680 | Msa1025940 | 0.811371 | 7.237766e-51 | -8.615850e-47 |
| Msa0679680 | Msa1029970 | 0.802774 | 4.782317e-49 | -8.615850e-47 |
| Msa0679680 | Msa1040800 | 0.822604 | 2.167361e-53 | -8.615850e-47 |
| Msa0679680 | Msa1040840 | 0.804621 | 1.978695e-49 | -8.615850e-47 |
| Msa0679680 | Msa1041210 | 0.824549 | 7.600827e-54 | -8.615850e-47 |
| Msa0679680 | Msa1041520 | 0.871353 | 7.290750e-67 | -8.615850e-47 |
| Msa0679680 | Msa1050420 | 0.802496 | 5.456662e-49 | -8.615850e-47 |
| Msa0679680 | Msa1081560 | 0.862623 | 4.444369e-64 | -8.615850e-47 |
| Msa0679680 | Msa1093330 | 0.845877 | 3.086572e-59 | -8.615850e-47 |
| Msa0679680 | Msa1109350 | 0.827346 | 1.645540e-54 | -8.615850e-47 |
| Msa0679680 | Msa1125470 | 0.801608 | 8.308337e-49 | -8.615850e-47 |
| Msa0679680 | Msa1125550 | 0.812838 | 3.465326e-51 | -8.615850e-47 |
| Msa0679680 | Msa1127130 | 0.835904 | 1.278970e-56 | -8.615850e-47 |
| Msa0679680 | Msa1127890 | 0.801859 | 7.381229e-49 | -8.615850e-47 |
| Msa0679680 | Msa1128330 | 0.804090 | 2.551878e-49 | -8.615850e-47 |
| Msa0679680 | Msa1133400 | 0.848931 | 4.474472e-60 | -8.615850e-47 |
| Msa0679680 | Msa1145240 | 0.825434 | 4.696745e-54 | -8.615850e-47 |
| Msa0679680 | Msa1166410 | 0.861548 | 9.494425e-64 | -8.615850e-47 |
| Msa0679680 | Msa1174100 | 0.837467 | 5.109781e-57 | -8.615850e-47 |
| Msa0679680 | Msa1179950 | 0.808283 | 3.341559e-50 | -8.615850e-47 |
| Msa0679680 | Msa1179980 | 0.811992 | 5.305586e-51 | -8.615850e-47 |
| Msa0679680 | Msa1184370 | 0.814550 | 1.454877e-51 | -8.615850e-47 |
| Msa0679680 | Msa1201830 | 0.809252 | 2.074338e-50 | -8.615850e-47 |
| Msa0679680 | Msa1206160 | 0.834225 | 3.389442e-56 | -8.615850e-47 |
| Msa0679680 | Msa1207730 | 0.812667 | 3.778467e-51 | -8.615850e-47 |
| Msa0679680 | Msa1227690 | 0.811054 | 8.483325e-51 | -8.615850e-47 |
| Msa0679680 | Msa1254710 | 0.815546 | 8.747659e-52 | -8.615850e-47 |
| Msa0679680 | Msa1265630 | 0.814100 | 1.829655e-51 | -8.615850e-47 |
| Msa0679680 | Msa1270620 | 0.803992 | 2.674804e-49 | -8.615850e-47 |
| Msa0679680 | Msa1270690 | 0.809005 | 2.342541e-50 | -8.615850e-47 |
| Msa0679680 | Msa1280620 | 0.818343 | 2.060153e-52 | -8.615850e-47 |
| Msa0679680 | Msa1294840 | 0.815956 | 7.086999e-52 | -8.615850e-47 |
| Msa0679680 | Msa1294960 | 0.806400 | 8.380880e-50 | -8.615850e-47 |
| Msa0679680 | Msa1295910 | 0.803212 | 3.881761e-49 | -8.615850e-47 |
| Msa0679680 | Msa1299700 | 0.800556 | 1.363583e-48 | -8.615850e-47 |
| Msa0679680 | Msa1306390 | 0.807322 | 5.350269e-50 | -8.615850e-47 |
| Msa0679680 | Msa1306990 | 0.823463 | 1.366505e-53 | -8.615850e-47 |
| Msa0679680 | Msa1311960 | 0.831611 | 1.513566e-55 | -8.615850e-47 |
| Msa0679680 | Msa1332220 | 0.803963 | 2.711827e-49 | -8.615850e-47 |
| Msa0679680 | Msa1340830 | 0.806117 | 9.611240e-50 | -8.615850e-47 |
| Msa0679680 | Msa1344850 | 0.813923 | 2.001689e-51 | -8.615850e-47 |
| Msa0679680 | Msa1355700 | 0.834215 | 3.408794e-56 | -8.615850e-47 |
| Msa0679680 | Msa1366600 | 0.805665 | 1.196499e-49 | -8.615850e-47 |
| Msa0679680 | Msa1371640 | 0.811691 | 6.168693e-51 | -8.615850e-47 |
| Msa0679680 | Msa1372310 | 0.808852 | 2.526794e-50 | -8.615850e-47 |
| Msa0679680 | Msa1376200 | 0.829256 | 5.700068e-55 | -8.615850e-47 |
| Msa0679680 | Msa1380970 | 0.810677 | 1.023460e-50 | -8.615850e-47 |
| Msa0679680 | Msa1386230 | 0.809421 | 1.907958e-50 | -8.615850e-47 |
| Msa0679680 | Msa1389680 | 0.814039 | 1.887202e-51 | -8.615850e-47 |
| Msa0679680 | Msa1390230 | 0.834162 | 3.514792e-56 | -8.615850e-47 |
| Msa0679680 | Msa1404190 | 0.800291 | 1.543698e-48 | -8.615850e-47 |
| Msa0679680 | Msa1409260 | 0.811779 | 5.902135e-51 | -8.615850e-47 |
| Msa0679680 | Msa1415940 | 0.801206 | 1.004485e-48 | -8.615850e-47 |
| Msa0679680 | Msa1427060 | 0.816474 | 5.429503e-52 | -8.615850e-47 |
| Msa0679680 | Msa1435770 | 0.801886 | 7.286245e-49 | -8.615850e-47 |
| Msa0679680 | Msa1438640 | 0.802727 | 4.889650e-49 | -8.615850e-47 |
| Msa0679680 | Msa1452480 | 0.802753 | 4.831243e-49 | -8.615850e-47 |
| Msa0679680 | Msa1466090 | 0.802001 | 6.900030e-49 | -8.615850e-47 |
| Msa0126770 | Msa0679680 | 0.806263 | 8.953898e-50 | -8.615850e-47 |
| Msa0127310 | Msa0679680 | 0.816582 | 5.134027e-52 | -8.615850e-47 |
| Msa0127850 | Msa0679680 | 0.804846 | 1.775423e-49 | -8.615850e-47 |
| Msa0133630 | Msa0679680 | 0.830696 | 2.539707e-55 | -8.615850e-47 |
| Msa0133720 | Msa0679680 | 0.804688 | 1.916197e-49 | -8.615850e-47 |
| Msa0135420 | Msa0679680 | 0.804339 | 2.265435e-49 | -8.615850e-47 |
| Msa0141340 | Msa0679680 | 0.819390 | 1.190785e-52 | -8.615850e-47 |
| Msa0146770 | Msa0679680 | 0.806957 | 6.390115e-50 | -8.615850e-47 |
| Msa0156230 | Msa0679680 | 0.814981 | 1.167969e-51 | -8.615850e-47 |
| Msa0165300 | Msa0679680 | 0.807107 | 5.940049e-50 | -8.615850e-47 |
| Msa0165440 | Msa0679680 | 0.806346 | 8.599930e-50 | -8.615850e-47 |
| Msa0171850 | Msa0679680 | 0.806287 | 8.850548e-50 | -8.615850e-47 |
| Msa0177210 | Msa0679680 | 0.813603 | 2.354471e-51 | -8.615850e-47 |
| Msa0185590 | Msa0679680 | 0.803047 | 4.199575e-49 | -8.615850e-47 |
| Msa0186770 | Msa0679680 | 0.813409 | 2.597460e-51 | -8.615850e-47 |
| Msa0198520 | Msa0679680 | 0.835972 | 1.228916e-56 | -8.615850e-47 |
| Msa0198530 | Msa0679680 | 0.857475 | 1.592121e-62 | -8.615850e-47 |
| Msa0208810 | Msa0679680 | 0.834371 | 3.115123e-56 | -8.615850e-47 |
| Msa0226470 | Msa0679680 | 0.806060 | 9.878706e-50 | -8.615850e-47 |
| Msa0227400 | Msa0679680 | 0.829285 | 5.607931e-55 | -8.615850e-47 |
| Msa0231660 | Msa0679680 | 0.805558 | 1.259516e-49 | -8.615850e-47 |
| Msa0372660 | Msa0679680 | 0.810056 | 1.393213e-50 | -8.615850e-47 |
| Msa0372670 | Msa0679680 | 0.810469 | 1.134770e-50 | -8.615850e-47 |
| Msa0413450 | Msa0679680 | 0.800692 | 1.279190e-48 | -8.615850e-47 |
| Msa0415810 | Msa0679680 | 0.803846 | 2.868627e-49 | -8.615850e-47 |
| Msa0419520 | Msa0679680 | 0.845429 | 4.083254e-59 | -8.615850e-47 |
| Msa0428170 | Msa0679680 | 0.800969 | 1.122955e-48 | -8.615850e-47 |
| Msa0439890 | Msa0679680 | 0.822049 | 2.916679e-53 | -8.615850e-47 |
| Msa0460930 | Msa0679680 | 0.816921 | 4.309391e-52 | -8.615850e-47 |
| Msa0465550 | Msa0679680 | 0.809893 | 1.510371e-50 | -8.615850e-47 |
| Msa0467780 | Msa0679680 | 0.815354 | 9.651977e-52 | -8.615850e-47 |
| Msa0480780 | Msa0679680 | 0.808553 | 2.926598e-50 | -8.615850e-47 |
| Msa0239450 | Msa0679680 | 0.823765 | 1.161579e-53 | -8.615850e-47 |
| Msa0245850 | Msa0679680 | 0.802939 | 4.420946e-49 | -8.615850e-47 |
| Msa0259270 | Msa0679680 | 0.826141 | 3.192756e-54 | -8.615850e-47 |
| Msa0260210 | Msa0679680 | 0.800664 | 1.295963e-48 | -8.615850e-47 |
| Msa0267870 | Msa0679680 | 0.811127 | 8.179596e-51 | -8.615850e-47 |
| Msa0278790 | Msa0679680 | 0.819982 | 8.725184e-53 | -8.615850e-47 |
| Msa0288730 | Msa0679680 | 0.825718 | 4.023789e-54 | -8.615850e-47 |
| Msa0291520 | Msa0679680 | 0.832333 | 1.003503e-55 | -8.615850e-47 |
| Msa0304290 | Msa0679680 | 0.810454 | 1.143554e-50 | -8.615850e-47 |
| Msa0304330 | Msa0679680 | 0.811613 | 6.414698e-51 | -8.615850e-47 |
| Msa0305890 | Msa0679680 | 0.805065 | 1.597647e-49 | -8.615850e-47 |
| Msa0310410 | Msa0679680 | 0.828083 | 1.094651e-54 | -8.615850e-47 |
| Msa0318720 | Msa0679680 | 0.822336 | 2.501571e-53 | -8.615850e-47 |
| Msa0324240 | Msa0679680 | 0.819647 | 1.040896e-52 | -8.615850e-47 |
| Msa0340810 | Msa0679680 | 0.800441 | 1.438930e-48 | -8.615850e-47 |
| Msa0363620 | Msa0679680 | 0.824176 | 9.301147e-54 | -8.615850e-47 |
| Msa0484840 | Msa0679680 | 0.821943 | 3.086036e-53 | -8.615850e-47 |
| Msa0506890 | Msa0679680 | 0.818639 | 1.764424e-52 | -8.615850e-47 |
| Msa0506940 | Msa0679680 | 0.813915 | 2.009936e-51 | -8.615850e-47 |
| Msa0514180 | Msa0679680 | 0.825829 | 3.787341e-54 | -8.615850e-47 |
| Msa0536790 | Msa0679680 | 0.806402 | 8.369028e-50 | -8.615850e-47 |
| Msa0542160 | Msa0679680 | 0.834044 | 3.762921e-56 | -8.615850e-47 |
| Msa0545060 | Msa0679680 | 0.929600 | 5.503157e-93 | -8.615850e-47 |
| Msa0549590 | Msa0679680 | 0.803268 | 3.780559e-49 | -8.615850e-47 |
| Msa0550540 | Msa0679680 | 0.804640 | 1.960813e-49 | -8.615850e-47 |
| Msa0550570 | Msa0679680 | 0.821193 | 4.598878e-53 | -8.615850e-47 |
| Msa0556790 | Msa0679680 | 0.808061 | 3.727036e-50 | -8.615850e-47 |
| Msa0558810 | Msa0679680 | 0.803085 | 4.125476e-49 | -8.615850e-47 |
| Msa0578090 | Msa0679680 | 0.825400 | 4.786323e-54 | -8.615850e-47 |
| Msa0586850 | Msa0679680 | 0.817692 | 2.889937e-52 | -8.615850e-47 |
| Msa0600600 | Msa0679680 | 0.896800 | 2.605050e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679680 | MtrunA17_Chr4g0025631 | 86.905 | 336 | 38 | 1 | 1 | 330 | 42 | 377 | 0.0 | 552 |
| Msa0679680 | MtrunA17_Chr8g0378681 | 73.669 | 338 | 76 | 4 | 1 | 330 | 2 | 334 | 5.56e-164 | 460 |
| Msa0679680 | MtrunA17_Chr1g0197131 | 74.436 | 133 | 28 | 1 | 204 | 330 | 1 | 133 | 6.17e-61 | 191 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0679680 | AT5G38720.3 | 59.060 | 149 | 54 | 1 | 189 | 330 | 165 | 313 | 1.05e-55 | 184 |
| Msa0679680 | AT5G38720.1 | 59.060 | 149 | 54 | 1 | 189 | 330 | 158 | 306 | 1.26e-55 | 183 |
| Msa0679680 | AT5G38720.2 | 59.060 | 149 | 54 | 1 | 189 | 330 | 177 | 325 | 7.36e-55 | 182 |
Find 67 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTATAATCTCCATTTC+AGG | 0.167824 | 4_4:+37769588 | None:intergenic |
| ATTAGAATCTCTGTGCTTCT+TGG | 0.245269 | 4_4:+37769320 | None:intergenic |
| TCTAAATCAACTTCATCTTC+TGG | 0.321764 | 4_4:+37769495 | None:intergenic |
| TGTCCTTGTTCTTCCTTCTT+CGG | 0.356153 | 4_4:+37770286 | None:intergenic |
| GCAGCTTGTAAAGGGGAAAA+AGG | 0.361208 | 4_4:-37770325 | Msa0679680:CDS |
| TCCTGAAATGGAGATTATAA+AGG | 0.363253 | 4_4:-37769589 | Msa0679680:CDS |
| GACATTCATATTATTTCCTC+TGG | 0.367904 | 4_4:-37769112 | Msa0679680:CDS |
| GTTGATTTAGAAGAGCAAAA+TGG | 0.379449 | 4_4:-37769483 | Msa0679680:intron |
| GTTGATTTAGAAGAGCAAAA+TGG | 0.379449 | 4_4:-37769765 | Msa0679680:intron |
| AGCTGCTCTAGAGAATAAAT+TGG | 0.384415 | 4_4:-37766817 | Msa0679680:CDS |
| AATAGAATGCAGCTTGTAAA+GGG | 0.394152 | 4_4:-37770333 | Msa0679680:exon |
| AAGCTACTACTAGTCGAAAA+AGG | 0.402492 | 4_4:-37769554 | Msa0679680:CDS |
| CCAACCCAGGTCTACTTTGA+TGG | 0.402517 | 4_4:+37768586 | None:intergenic |
| TGTTTCAGTGGATCCTGAAA+TGG | 0.428608 | 4_4:-37769601 | Msa0679680:intron |
| AAAAGAGAAGCTCAGAGAAA+TGG | 0.446445 | 4_4:-37766748 | Msa0679680:intron |
| CAACATTCAACTACACTTTG+AGG | 0.458842 | 4_4:-37771092 | Msa0679680:five_prime_UTR |
| CCTGAAATGGAGATTATAAA+GGG | 0.465886 | 4_4:-37769588 | Msa0679680:CDS |
| AGTTCTAAAATCACCAGAAA+AGG | 0.474585 | 4_4:-37769155 | Msa0679680:CDS |
| AAGTGGGATTGCTGTGGGCT+CGG | 0.474663 | 4_4:-37766847 | Msa0679680:CDS |
| AAAGGCAGAACAAAATCATC+AGG | 0.476614 | 4_4:-37769137 | Msa0679680:CDS |
| GGAGATTATAAAGGGAAGAA+AGG | 0.484365 | 4_4:-37769580 | Msa0679680:CDS |
| TAATAGAATGCAGCTTGTAA+AGG | 0.488478 | 4_4:-37770334 | Msa0679680:exon |
| AACATTCAACTACACTTTGA+GGG | 0.492591 | 4_4:-37771091 | Msa0679680:intron |
| GGAATTGCAGAGCAAATTTG+AGG | 0.494356 | 4_4:-37766127 | Msa0679680:intron |
| AGATAAGAAGAAAAGAAGAA+AGG | 0.498367 | 4_4:-37769179 | Msa0679680:CDS |
| TCAAACTGCAGAGTGGATCA+TGG | 0.512454 | 4_4:-37768613 | Msa0679680:intron |
| TGATCACGGGATGCAAGTTA+CGG | 0.516984 | 4_4:-37769877 | Msa0679680:CDS |
| TGGTTGTTTCAGTTGATCAC+GGG | 0.517139 | 4_4:-37769890 | Msa0679680:intron |
| CCATCAAAGTAGACCTGGGT+TGG | 0.520897 | 4_4:-37768586 | Msa0679680:CDS |
| AAAACTACCGACTCTGAAAG+TGG | 0.527900 | 4_4:-37766864 | Msa0679680:CDS |
| AATGATGTCAGATGGAATAG+TGG | 0.531547 | 4_4:-37769379 | Msa0679680:intron |
| CTCTGAAAGTGGGATTGCTG+TGG | 0.532604 | 4_4:-37766853 | Msa0679680:CDS |
| CGAGAAGAAGAAGAAAAGTA+AGG | 0.533573 | 4_4:-37770388 | Msa0679680:five_prime_UTR |
| GCAACTTGTTTCTGAGACAA+GGG | 0.538431 | 4_4:+37771177 | None:intergenic |
| TCAAAGTAGACCTGGGTTGG+AGG | 0.539427 | 4_4:-37768583 | Msa0679680:CDS |
| AAAGAAGCCCTTGCTGCAGA+AGG | 0.540425 | 4_4:-37766924 | Msa0679680:CDS |
| TGCAACTTGTTTCTGAGACA+AGG | 0.549261 | 4_4:+37771176 | None:intergenic |
| TTGGTTGTTTCAGTTGATCA+CGG | 0.550128 | 4_4:-37769891 | Msa0679680:intron |
| TGTCAATCGCGGAATCTCGA+AGG | 0.560946 | 4_4:+37771113 | None:intergenic |
| GGAGATGATGACTGCTCACA+TGG | 0.561999 | 4_4:-37769091 | Msa0679680:CDS |
| GAATACCATCAAAGTAGACC+TGG | 0.568338 | 4_4:-37768591 | Msa0679680:CDS |
| TCTGAAAGTGGGATTGCTGT+GGG | 0.573818 | 4_4:-37766852 | Msa0679680:CDS |
| AAGAAGCCCTTGCTGCAGAA+GGG | 0.579858 | 4_4:-37766923 | Msa0679680:CDS |
| ACATAGTGATTCTAAAGAAG+AGG | 0.580245 | 4_4:-37769355 | Msa0679680:CDS |
| AGAAGCCCTTGCTGCAGAAG+GGG | 0.584522 | 4_4:-37766922 | Msa0679680:CDS |
| GTTGTTGTAGAAGAGCAAAA+TGG | 0.586388 | 4_4:-37770225 | Msa0679680:intron |
| TCGAAGGGAGGTGCAATTAG+CGG | 0.586427 | 4_4:+37771129 | None:intergenic |
| GTCAATCGCGGAATCTCGAA+GGG | 0.598801 | 4_4:+37771114 | None:intergenic |
| GAAGAAGAAGAAAAGTAAGG+TGG | 0.599273 | 4_4:-37770385 | Msa0679680:five_prime_UTR |
| AAGTTATTACTATCCGAAGA+AGG | 0.599313 | 4_4:-37770299 | Msa0679680:CDS |
| GACGGTGGTTCAACACCACA+AGG | 0.613486 | 4_4:-37766895 | Msa0679680:CDS |
| AAACTACCGACTCTGAAAGT+GGG | 0.614607 | 4_4:-37766863 | Msa0679680:CDS |
| CACGGGATGCAAGTTACGGA+GGG | 0.615938 | 4_4:-37769873 | Msa0679680:CDS |
| AGCAATCCCACTTTCAGAGT+CGG | 0.619196 | 4_4:+37766857 | None:intergenic |
| TGGTTCAACACCACAAGGGT+AGG | 0.619462 | 4_4:-37766890 | Msa0679680:CDS |
| GAAGCCCTTGCTGCAGAAGG+GGG | 0.628790 | 4_4:-37766921 | Msa0679680:CDS |
| AAATGCTGAAGTTGAGACAG+TGG | 0.639592 | 4_4:-37770358 | Msa0679680:five_prime_UTR |
| TGCAGCAGTTGAGAGCTGCT+AGG | 0.640397 | 4_4:-37766089 | Msa0679680:CDS |
| ATAGAATGCAGCTTGTAAAG+GGG | 0.647805 | 4_4:-37770332 | Msa0679680:exon |
| TAGTTGAATGTTGTCAATCG+CGG | 0.659338 | 4_4:+37771102 | None:intergenic |
| TCACGGGATGCAAGTTACGG+AGG | 0.659404 | 4_4:-37769874 | Msa0679680:CDS |
| AATACCATCAAAGTAGACCT+GGG | 0.679517 | 4_4:-37768590 | Msa0679680:CDS |
| TGAGCAGTCATCATCTCCAG+AGG | 0.681253 | 4_4:+37769096 | None:intergenic |
| TATCCGAAGAAGGAAGAACA+AGG | 0.684569 | 4_4:-37770289 | Msa0679680:CDS |
| AATCGCGGAATCTCGAAGGG+AGG | 0.702076 | 4_4:+37771117 | None:intergenic |
| AGACTATTTAACTACATACG+AGG | 0.724184 | 4_4:-37768541 | Msa0679680:CDS |
| ACGGTGGTTCAACACCACAA+GGG | 0.755501 | 4_4:-37766894 | Msa0679680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGTTTATGAAATATTA+GGG | - | chr4_4:37770807-37770826 | Msa0679680:intron | 10.0% |
| !!! | TTTTTTTCTTCATTATAATG+TGG | - | chr4_4:37766264-37766283 | Msa0679680:intron | 15.0% |
| !! | TGTATATTTATTGTTATACA+TGG | - | chr4_4:37768580-37768599 | Msa0679680:CDS | 15.0% |
| !!! | TGTTGGAAAATATTTTATTT+AGG | - | chr4_4:37768961-37768980 | Msa0679680:intron | 15.0% |
| !!! | GTTGGAAAATATTTTATTTA+GGG | - | chr4_4:37768962-37768981 | Msa0679680:intron | 15.0% |
| !! | AAATCATAAACATGTTAATT+AGG | - | chr4_4:37770713-37770732 | Msa0679680:intron | 15.0% |
| !! | AATCATAAACATGTTAATTA+GGG | - | chr4_4:37770714-37770733 | Msa0679680:intron | 15.0% |
| !!! | CTTTTAGTTTATGAAATATT+AGG | - | chr4_4:37770806-37770825 | Msa0679680:intron | 15.0% |
| !! | TATTGTGAATAATAATTTCG+TGG | + | chr4_4:37767134-37767153 | None:intergenic | 20.0% |
| !!! | GAATTTTCTCTGAAATAAAT+CGG | - | chr4_4:37767663-37767682 | Msa0679680:intron | 20.0% |
| !! | TATACATATACATACAGTAA+TGG | - | chr4_4:37768397-37768416 | Msa0679680:intron | 20.0% |
| !! | AAGAATAATGGTAAACAATA+TGG | + | chr4_4:37768510-37768529 | None:intergenic | 20.0% |
| !!! | TAATTATATAGCTTTTGACT+TGG | - | chr4_4:37768646-37768665 | Msa0679680:intron | 20.0% |
| !!! | AATTATATAGCTTTTGACTT+GGG | - | chr4_4:37768647-37768666 | Msa0679680:intron | 20.0% |
| !!! | CTTTTACAAGTTATTTTTCA+AGG | + | chr4_4:37769018-37769037 | None:intergenic | 20.0% |
| !! | TCAAAATAAGGAACAAATAT+GGG | + | chr4_4:37770301-37770320 | None:intergenic | 20.0% |
| !! | ATCAAAATAAGGAACAAATA+TGG | + | chr4_4:37770302-37770321 | None:intergenic | 20.0% |
| !!! | ATTTCCATGCAATTATTTTT+TGG | - | chr4_4:37770320-37770339 | Msa0679680:CDS | 20.0% |
| !!! | CAACTTCTTTATTTTCTTTT+TGG | + | chr4_4:37770497-37770516 | None:intergenic | 20.0% |
| !! | CAAAAAGAAAATAAAGAAGT+TGG | - | chr4_4:37770495-37770514 | Msa0679680:intron | 20.0% |
| !! | TTACCTAGGATATAAAAATA+TGG | + | chr4_4:37770592-37770611 | None:intergenic | 20.0% |
| !! | ATCATAAACATGTTAATTAG+GGG | - | chr4_4:37770715-37770734 | Msa0679680:intron | 20.0% |
| !! | AATGAATCCTTTATACTATT+AGG | + | chr4_4:37770872-37770891 | None:intergenic | 20.0% |
| !! | TCATAGAAACAAAGATATTA+GGG | + | chr4_4:37770921-37770940 | None:intergenic | 20.0% |
| !! | ATCATAGAAACAAAGATATT+AGG | + | chr4_4:37770922-37770941 | None:intergenic | 20.0% |
| ! | TTTATTACATTCTGTGTAGT+TGG | - | chr4_4:37766303-37766322 | Msa0679680:intron | 25.0% |
| !! | TGTAGTTGGTTCATAATTTA+TGG | - | chr4_4:37766317-37766336 | Msa0679680:intron | 25.0% |
| !! | TTGTGTGTATTACATAGTTT+TGG | - | chr4_4:37766355-37766374 | Msa0679680:intron | 25.0% |
| ! | CTTAAATAAGCCAATTCAAA+CGG | + | chr4_4:37766381-37766400 | None:intergenic | 25.0% |
| ! | AATGTAAAGTGGTTTATATC+TGG | - | chr4_4:37766474-37766493 | Msa0679680:intron | 25.0% |
| ! | TCTAACTTGAAGCTATAAAT+TGG | + | chr4_4:37766568-37766587 | None:intergenic | 25.0% |
| ! | TAAACTGTTTATCCAAACAA+GGG | - | chr4_4:37766783-37766802 | Msa0679680:CDS | 25.0% |
| ! | ACATATAAATAACCCTTGTT+TGG | + | chr4_4:37766798-37766817 | None:intergenic | 25.0% |
| ! | GTTATGATGAAAGTAAGTAA+GGG | - | chr4_4:37766856-37766875 | Msa0679680:CDS | 25.0% |
| ! | TTATGATGAAAGTAAGTAAG+GGG | - | chr4_4:37766857-37766876 | Msa0679680:CDS | 25.0% |
| ! | TATTCACAATATCTTGAAGT+CGG | - | chr4_4:37767143-37767162 | Msa0679680:intron | 25.0% |
| !! | TCGTGACATTTAGTATTTTT+CGG | - | chr4_4:37767276-37767295 | Msa0679680:intron | 25.0% |
| ! | TGAAACAACCAATTCATATA+GGG | + | chr4_4:37767389-37767408 | None:intergenic | 25.0% |
| !!! | TGTCCTTGTTTTTCTTTTTT+CGG | + | chr4_4:37767465-37767484 | None:intergenic | 25.0% |
| !!! | AATGTGTTATGTTTTTGTAC+TGG | - | chr4_4:37767628-37767647 | Msa0679680:intron | 25.0% |
| ! | GAAAAATTCTATGAGGAAAA+TGG | + | chr4_4:37768064-37768083 | None:intergenic | 25.0% |
| ! | AAACAGAGAAAAATTCTATG+AGG | + | chr4_4:37768071-37768090 | None:intergenic | 25.0% |
| !! | AGAATTTTTCTCTGTTTTGT+AGG | - | chr4_4:37768074-37768093 | Msa0679680:intron | 25.0% |
| ! | AGATAAGAAGAAAAGAAGAA+AGG | - | chr4_4:37768109-37768128 | Msa0679680:intron | 25.0% |
| ! | AATTCTGCGAAGAAAAAAAA+AGG | + | chr4_4:37768240-37768259 | None:intergenic | 25.0% |
| ! | TCGCAGAATTACTTTATATT+TGG | - | chr4_4:37768250-37768269 | Msa0679680:intron | 25.0% |
| ! | TACATTGGAACAATTTACAA+TGG | - | chr4_4:37768367-37768386 | Msa0679680:intron | 25.0% |
| ! | TCGCTGTATAATAAAATTCA+TGG | + | chr4_4:37768930-37768949 | None:intergenic | 25.0% |
| !!! | AAAGTCATTTTTCATACATC+TGG | - | chr4_4:37769034-37769053 | Msa0679680:intron | 25.0% |
| !!! | AAGTCATTTTTCATACATCT+GGG | - | chr4_4:37769035-37769054 | Msa0679680:intron | 25.0% |
| ! | ATCCAAGTTATAGTTGTATA+AGG | - | chr4_4:37769071-37769090 | Msa0679680:intron | 25.0% |
| ! | AACCTTATACAACTATAACT+TGG | + | chr4_4:37769076-37769095 | None:intergenic | 25.0% |
| ! | GAGAGTAATTGATAGAAATA+TGG | - | chr4_4:37769428-37769447 | Msa0679680:intron | 25.0% |
| !! | TATTTCTCTGTATTTTCTCT+TGG | - | chr4_4:37769846-37769865 | Msa0679680:CDS | 25.0% |
| ! | ATTGCATGGAAATCAAAATA+AGG | + | chr4_4:37770313-37770332 | None:intergenic | 25.0% |
| ! | TTGACCAAAAAATAATTGCA+TGG | + | chr4_4:37770327-37770346 | None:intergenic | 25.0% |
| !!! | AATTATTTTTTGGTCAATGC+AGG | - | chr4_4:37770330-37770349 | Msa0679680:CDS | 25.0% |
| !!! | TTGCCATATTTTTATATCCT+AGG | - | chr4_4:37770586-37770605 | Msa0679680:intron | 25.0% |
| ! | TCATAAACATGTTAATTAGG+GGG | - | chr4_4:37770716-37770735 | Msa0679680:intron | 25.0% |
| ! | TGCGTAGAATCTTAATTTAA+TGG | + | chr4_4:37770959-37770978 | None:intergenic | 25.0% |
| AACATTCAACTACACTTTGA+GGG | - | chr4_4:37766197-37766216 | Msa0679680:intron | 30.0% | |
| ! | CTTCAAGTTAGAATCAATTC+TGG | - | chr4_4:37766576-37766595 | Msa0679680:intron | 30.0% |
| CTAAACTGTTTATCCAAACA+AGG | - | chr4_4:37766782-37766801 | Msa0679680:CDS | 30.0% | |
| CGTTATGATGAAAGTAAGTA+AGG | - | chr4_4:37766855-37766874 | Msa0679680:CDS | 30.0% | |
| AAAGTAAGTAAGGGGAAAAA+GGG | - | chr4_4:37766865-37766884 | Msa0679680:CDS | 30.0% | |
| TAATAGAATGCAGCTTGTAA+AGG | - | chr4_4:37766954-37766973 | Msa0679680:intron | 30.0% | |
| AATAGAATGCAGCTTGTAAA+GGG | - | chr4_4:37766955-37766974 | Msa0679680:intron | 30.0% | |
| AAGTTATTACTATCCGAAGA+AGG | - | chr4_4:37766989-37767008 | Msa0679680:intron | 30.0% | |
| AAATGGTGAGTTAATGATAG+TGG | - | chr4_4:37767080-37767099 | Msa0679680:intron | 30.0% | |
| GAACATTTCCCTATATGAAT+TGG | - | chr4_4:37767378-37767397 | Msa0679680:intron | 30.0% | |
| CTGAAACAACCAATTCATAT+AGG | + | chr4_4:37767390-37767409 | None:intergenic | 30.0% | |
| AACAAGGACAAAAATCTAGT+TGG | - | chr4_4:37767475-37767494 | Msa0679680:intron | 30.0% | |
| ! | GTTGATTTAGAAGAGCAAAA+TGG | - | chr4_4:37767523-37767542 | Msa0679680:intron | 30.0% |
| ! | AAATAAATCGGTTGTTTCAG+TGG | - | chr4_4:37767675-37767694 | Msa0679680:intron | 30.0% |
| TCCTGAAATGGAGATTATAA+AGG | - | chr4_4:37767699-37767718 | Msa0679680:intron | 30.0% | |
| CCTGAAATGGAGATTATAAA+GGG | - | chr4_4:37767700-37767719 | Msa0679680:intron | 30.0% | |
| AACAAGGACAAAAATCTAGT+TGG | - | chr4_4:37767475-37767494 | Msa0679680:intron | 30.0% | |
| TCTAAATCAACTTCATCTTC+TGG | + | chr4_4:37767796-37767815 | None:intergenic | 30.0% | |
| ! | GTTGATTTAGAAGAGCAAAA+TGG | - | chr4_4:37767523-37767542 | Msa0679680:intron | 30.0% |
| ! | ACATAGTGATTCTAAAGAAG+AGG | - | chr4_4:37767933-37767952 | Msa0679680:intron | 30.0% |
| ! | AGAAAGTGCAGTTTATTACA+AGG | + | chr4_4:37768012-37768031 | None:intergenic | 30.0% |
| TTGTAATAAACTGCACTTTC+TGG | - | chr4_4:37768011-37768030 | Msa0679680:intron | 30.0% | |
| ! | TTTTTCTCTGTTTTGTAGGT+AGG | - | chr4_4:37768078-37768097 | Msa0679680:intron | 30.0% |
| !! | AGTTCTAAAATCACCAGAAA+AGG | - | chr4_4:37768133-37768152 | Msa0679680:intron | 30.0% |
| GACATTCATATTATTTCCTC+TGG | - | chr4_4:37768176-37768195 | Msa0679680:intron | 30.0% | |
| !!! | GGTTAGTTTTACATGTACAT+TGG | - | chr4_4:37768352-37768371 | Msa0679680:intron | 30.0% |
| TAAACAATATGGTCACTCTT+AGG | + | chr4_4:37768499-37768518 | None:intergenic | 30.0% | |
| AGACTATTTAACTACATACG+AGG | - | chr4_4:37768747-37768766 | Msa0679680:intron | 30.0% | |
| AACTACATACGAGGAAAAAT+TGG | - | chr4_4:37768756-37768775 | Msa0679680:intron | 30.0% | |
| TCTTAAAGCAAAACAGAAGT+CGG | - | chr4_4:37768804-37768823 | Msa0679680:intron | 30.0% | |
| AGGGTTATCTGACTATAATT+AGG | + | chr4_4:37768882-37768901 | None:intergenic | 30.0% | |
| CAGCGAAATTAAATTGATGT+TGG | - | chr4_4:37768944-37768963 | Msa0679680:intron | 30.0% | |
| !! | TTAAATTTGGTGTTAGGATG+TGG | - | chr4_4:37769183-37769202 | Msa0679680:CDS | 30.0% |
| TATTAAAATGATATGCACGC+AGG | + | chr4_4:37769298-37769317 | None:intergenic | 30.0% | |
| ! | AGAAACTCAAAAAGCACATA+AGG | + | chr4_4:37769329-37769348 | None:intergenic | 30.0% |
| !!! | ATGTGCTTTTTGAGTTTCTT+TGG | - | chr4_4:37769330-37769349 | Msa0679680:CDS | 30.0% |
| !! | GGTTTTGATGAGTAAGAATA+AGG | - | chr4_4:37769449-37769468 | Msa0679680:intron | 30.0% |
| CATTACTGTTCTGTAATCAA+GGG | + | chr4_4:37769482-37769501 | None:intergenic | 30.0% | |
| AACAGTAATGCATAATCATG+AGG | - | chr4_4:37769492-37769511 | Msa0679680:CDS | 30.0% | |
| ACAGTAATGCATAATCATGA+GGG | - | chr4_4:37769493-37769512 | Msa0679680:CDS | 30.0% | |
| TGAGAAAGTTAGAAGAAACA+AGG | + | chr4_4:37769543-37769562 | None:intergenic | 30.0% | |
| ! | GAATGTTTTCAGCAAATAGA+AGG | + | chr4_4:37769648-37769667 | None:intergenic | 30.0% |
| ACATTCCACAATGATAGATA+AGG | - | chr4_4:37769662-37769681 | Msa0679680:intron | 30.0% | |
| TGGTAATCATGTATCAAGAT+TGG | + | chr4_4:37769690-37769709 | None:intergenic | 30.0% | |
| ! | GATTTCTTTAGAGACATCAA+TGG | + | chr4_4:37769822-37769841 | None:intergenic | 30.0% |
| GAGTGAATTCATAGATAACT+TGG | - | chr4_4:37769913-37769932 | Msa0679680:intron | 30.0% | |
| ! | ATCTGTCATTTCAGTTACAA+TGG | + | chr4_4:37769975-37769994 | None:intergenic | 30.0% |
| GTGAGATGAGAGATTATAAA+GGG | + | chr4_4:37770207-37770226 | None:intergenic | 30.0% | |
| TGTGAGATGAGAGATTATAA+AGG | + | chr4_4:37770208-37770227 | None:intergenic | 30.0% | |
| TCATAGCTGTAAATTGAACA+TGG | + | chr4_4:37770273-37770292 | None:intergenic | 30.0% | |
| TAAATTTAAACCAACGACGT+TGG | - | chr4_4:37770674-37770693 | Msa0679680:intron | 30.0% | |
| CATAAACATGTTAATTAGGG+GGG | - | chr4_4:37770717-37770736 | Msa0679680:intron | 30.0% | |
| ATAAACATGTTAATTAGGGG+GGG | - | chr4_4:37770718-37770737 | Msa0679680:intron | 30.0% | |
| TGCTAGACCTAATAGTATAA+AGG | - | chr4_4:37770862-37770881 | Msa0679680:intron | 30.0% | |
| AGCGAGAAATATCACAAATA+GGG | + | chr4_4:37770897-37770916 | None:intergenic | 30.0% | |
| AAGCGAGAAATATCACAAAT+AGG | + | chr4_4:37770898-37770917 | None:intergenic | 30.0% | |
| !!! | TGCTGTTTTAAACTAGTACA+TGG | - | chr4_4:37771068-37771087 | Msa0679680:intron | 30.0% |
| TAGTTGAATGTTGTCAATCG+CGG | + | chr4_4:37766189-37766208 | None:intergenic | 35.0% | |
| CAACATTCAACTACACTTTG+AGG | - | chr4_4:37766196-37766215 | Msa0679680:intron | 35.0% | |
| !!! | ATAGTTTTGGCCGTTTGAAT+TGG | - | chr4_4:37766368-37766387 | Msa0679680:intron | 35.0% |
| CAAGTTAGAATCAATTCTGG+AGG | - | chr4_4:37766579-37766598 | Msa0679680:intron | 35.0% | |
| !!! | AATTTTGGTTCCTCCAAAAG+TGG | - | chr4_4:37766664-37766683 | Msa0679680:intron | 35.0% |
| ! | TGTATGTCTGATTCCACTTT+TGG | + | chr4_4:37766680-37766699 | None:intergenic | 35.0% |
| GAAAGTAAGTAAGGGGAAAA+AGG | - | chr4_4:37766864-37766883 | Msa0679680:CDS | 35.0% | |
| CGAGAAGAAGAAGAAAAGTA+AGG | - | chr4_4:37766900-37766919 | Msa0679680:CDS | 35.0% | |
| GAAGAAGAAGAAAAGTAAGG+TGG | - | chr4_4:37766903-37766922 | Msa0679680:CDS | 35.0% | |
| ATAGAATGCAGCTTGTAAAG+GGG | - | chr4_4:37766956-37766975 | Msa0679680:intron | 35.0% | |
| AACAAGGACAAAAATCTAGC+TGG | - | chr4_4:37767015-37767034 | Msa0679680:intron | 35.0% | |
| GTTGTTGTAGAAGAGCAAAA+TGG | - | chr4_4:37767063-37767082 | Msa0679680:intron | 35.0% | |
| ATGCCAAACCAATTGCATTA+AGG | - | chr4_4:37767218-37767237 | Msa0679680:intron | 35.0% | |
| ATGCCTTAATGCAATTGGTT+TGG | + | chr4_4:37767224-37767243 | None:intergenic | 35.0% | |
| ! | TTGGTTGTTTCAGTTGATCA+CGG | - | chr4_4:37767397-37767416 | Msa0679680:intron | 35.0% |
| !!! | CTTGTTTTTCTTTTTTCGGC+TGG | + | chr4_4:37767461-37767480 | None:intergenic | 35.0% |
| CAGCCGAAAAAAGAAAAACA+AGG | - | chr4_4:37767459-37767478 | Msa0679680:intron | 35.0% | |
| CCCTTTATAATCTCCATTTC+AGG | + | chr4_4:37767703-37767722 | None:intergenic | 35.0% | |
| GGAGATTATAAAGGGAAGAA+AGG | - | chr4_4:37767708-37767727 | Msa0679680:intron | 35.0% | |
| AAGCTACTACTAGTCGAAAA+AGG | - | chr4_4:37767734-37767753 | Msa0679680:intron | 35.0% | |
| TAGTCGAAAAAGGAAGAACA+AGG | - | chr4_4:37767744-37767763 | Msa0679680:intron | 35.0% | |
| CTGACATCATTGAGGAAAAA+AGG | + | chr4_4:37767900-37767919 | None:intergenic | 35.0% | |
| ! | TTTTCCTCAATGATGTCAGA+TGG | - | chr4_4:37767901-37767920 | Msa0679680:intron | 35.0% |
| TATTCCATCTGACATCATTG+AGG | + | chr4_4:37767908-37767927 | None:intergenic | 35.0% | |
| AATGATGTCAGATGGAATAG+TGG | - | chr4_4:37767909-37767928 | Msa0679680:intron | 35.0% | |
| ATTAGAATCTCTGTGCTTCT+TGG | + | chr4_4:37767971-37767990 | None:intergenic | 35.0% | |
| ! | TGATTTTGTTCTGCCTTTTC+TGG | + | chr4_4:37768149-37768168 | None:intergenic | 35.0% |
| AAAGGCAGAACAAAATCATC+AGG | - | chr4_4:37768151-37768170 | Msa0679680:intron | 35.0% | |
| CAGCATAGTTACATATTGTG+AGG | - | chr4_4:37768331-37768350 | Msa0679680:intron | 35.0% | |
| ACAAATATGCACAAAGCACA+CGG | + | chr4_4:37768563-37768582 | None:intergenic | 35.0% | |
| AATACCATCAAAGTAGACCT+GGG | - | chr4_4:37768698-37768717 | Msa0679680:intron | 35.0% | |
| ATACGAGGAAAAATTGGAAG+AGG | - | chr4_4:37768762-37768781 | Msa0679680:intron | 35.0% | |
| ! | AGTCAGATAACCCTTTTATC+AGG | - | chr4_4:37768888-37768907 | Msa0679680:intron | 35.0% |
| ! | GTCAGATAACCCTTTTATCA+GGG | - | chr4_4:37768889-37768908 | Msa0679680:intron | 35.0% |
| ! | TCAGATAACCCTTTTATCAG+GGG | - | chr4_4:37768890-37768909 | Msa0679680:intron | 35.0% |
| TATTATCCCCCCTGATAAAA+GGG | + | chr4_4:37768901-37768920 | None:intergenic | 35.0% | |
| TTATTATCCCCCCTGATAAA+AGG | + | chr4_4:37768902-37768921 | None:intergenic | 35.0% | |
| !! | TTGTATACCGACTAGTTCTA+TGG | - | chr4_4:37768992-37769011 | Msa0679680:intron | 35.0% |
| ! | TGACAGAGCTTTTCTGTTTA+TGG | - | chr4_4:37769143-37769162 | Msa0679680:CDS | 35.0% |
| ! | GACAGAGCTTTTCTGTTTAT+GGG | - | chr4_4:37769144-37769163 | Msa0679680:CDS | 35.0% |
| ! | ACAGAGCTTTTCTGTTTATG+GGG | - | chr4_4:37769145-37769164 | Msa0679680:CDS | 35.0% |
| ! | TGGTAGTTGGTGCTTAAATT+TGG | - | chr4_4:37769170-37769189 | Msa0679680:CDS | 35.0% |
| !! | TGGTGCTTAAATTTGGTGTT+AGG | - | chr4_4:37769177-37769196 | Msa0679680:CDS | 35.0% |
| !!! | TTTTTGAGTTTCTTTGGCCT+AGG | - | chr4_4:37769336-37769355 | Msa0679680:CDS | 35.0% |
| GCATTACTGTTCTGTAATCA+AGG | + | chr4_4:37769483-37769502 | None:intergenic | 35.0% | |
| TAGAAGAAACAAGGCATGTT+GGG | + | chr4_4:37769534-37769553 | None:intergenic | 35.0% | |
| TTAGAAGAAACAAGGCATGT+TGG | + | chr4_4:37769535-37769554 | None:intergenic | 35.0% | |
| AAATAGAAGGAGAACGTTTC+GGG | + | chr4_4:37769635-37769654 | None:intergenic | 35.0% | |
| CAAATAGAAGGAGAACGTTT+CGG | + | chr4_4:37769636-37769655 | None:intergenic | 35.0% | |
| TGGAACCTTATCTATCATTG+TGG | + | chr4_4:37769670-37769689 | None:intergenic | 35.0% | |
| ATACAGATGAGAGCCAATAA+TGG | - | chr4_4:37769712-37769731 | Msa0679680:intron | 35.0% | |
| !! | TTTTGACTCGTGAACATTGA+AGG | + | chr4_4:37769758-37769777 | None:intergenic | 35.0% |
| CATTTCAGTTACAATGGTCA+AGG | + | chr4_4:37769969-37769988 | None:intergenic | 35.0% | |
| !! | GAAAGGTGTTAGAACTTTGA+GGG | + | chr4_4:37770096-37770115 | None:intergenic | 35.0% |
| !! | AGAAAGGTGTTAGAACTTTG+AGG | + | chr4_4:37770097-37770116 | None:intergenic | 35.0% |
| ACCTTTCTCTTCCTTAAGTT+GGG | - | chr4_4:37770109-37770128 | Msa0679680:intron | 35.0% | |
| GAAATGACAAACCCAACTTA+AGG | + | chr4_4:37770123-37770142 | None:intergenic | 35.0% | |
| ! | ATGGCAAAGTGAGTTAGTTT+GGG | + | chr4_4:37770232-37770251 | None:intergenic | 35.0% |
| TATGGCAAAGTGAGTTAGTT+TGG | + | chr4_4:37770233-37770252 | None:intergenic | 35.0% | |
| !! | AGCTGCTCTAGAGAATAAAT+TGG | - | chr4_4:37770471-37770490 | Msa0679680:intron | 35.0% |
| !!! | GAGCTTCTCTTTTTTGAAAG+CGG | + | chr4_4:37770533-37770552 | None:intergenic | 35.0% |
| AAAAGAGAAGCTCAGAGAAA+TGG | - | chr4_4:37770540-37770559 | Msa0679680:intron | 35.0% | |
| GAAACAGCTAGAAATTACCT+AGG | + | chr4_4:37770606-37770625 | None:intergenic | 35.0% | |
| !! | GACGTTGGTGGTTTAAATAA+AGG | - | chr4_4:37770689-37770708 | Msa0679680:intron | 35.0% |
| CATGTTGGTGCAAATATAGA+TGG | + | chr4_4:37770753-37770772 | None:intergenic | 35.0% | |
| CATCTATATTTGCACCAACA+TGG | - | chr4_4:37770751-37770770 | Msa0679680:intron | 35.0% | |
| ACACTAGCAGATAATGTTTC+TGG | - | chr4_4:37770984-37771003 | Msa0679680:intron | 35.0% | |
| TGAGACAAGGGAAAAAGAGA+TGG | + | chr4_4:37766102-37766121 | None:intergenic | 40.0% | |
| !! | GCAACTTGTTTCTGAGACAA+GGG | + | chr4_4:37766114-37766133 | None:intergenic | 40.0% |
| !! | TGCAACTTGTTTCTGAGACA+AGG | + | chr4_4:37766115-37766134 | None:intergenic | 40.0% |
| CGATAGTTTGAGTGTGTGTT+TGG | - | chr4_4:37766410-37766429 | Msa0679680:intron | 40.0% | |
| ! | ACGGTGAGTTGAATGTAAAG+TGG | - | chr4_4:37766463-37766482 | Msa0679680:intron | 40.0% |
| CAAAATCAATTCGACACCTC+CGG | - | chr4_4:37766637-37766656 | Msa0679680:intron | 40.0% | |
| ! | GGAGGAACCAAAATTGATTC+CGG | + | chr4_4:37766659-37766678 | None:intergenic | 40.0% |
| !! | ATGTCTGATTCCACTTTTGG+AGG | + | chr4_4:37766677-37766696 | None:intergenic | 40.0% |
| !! | TTGCGTTTGTGTTGATTCAC+AGG | - | chr4_4:37766823-37766842 | Msa0679680:CDS | 40.0% |
| AAATGCTGAAGTTGAGACAG+TGG | - | chr4_4:37766930-37766949 | Msa0679680:CDS | 40.0% | |
| TATCCGAAGAAGGAAGAACA+AGG | - | chr4_4:37766999-37767018 | Msa0679680:intron | 40.0% | |
| TGTCCTTGTTCTTCCTTCTT+CGG | + | chr4_4:37767005-37767024 | None:intergenic | 40.0% | |
| !! | GTGAGTTAATGATAGTGGTG+TGG | - | chr4_4:37767085-37767104 | Msa0679680:intron | 40.0% |
| ! | ACCAATTGCATTAAGGCATC+CGG | - | chr4_4:37767225-37767244 | Msa0679680:intron | 40.0% |
| ATCACAGAACTCACAAAAGC+CGG | + | chr4_4:37767247-37767266 | None:intergenic | 40.0% | |
| ! | TGGTTGTTTCAGTTGATCAC+GGG | - | chr4_4:37767398-37767417 | Msa0679680:intron | 40.0% |
| !! | AAATGGTGAGTTGATGACAG+TGG | - | chr4_4:37767540-37767559 | Msa0679680:intron | 40.0% |
| TGTTTCAGTGGATCCTGAAA+TGG | - | chr4_4:37767687-37767706 | Msa0679680:intron | 40.0% | |
| ! | AGAGCAAAATGGTGAGTTGA+TGG | - | chr4_4:37767534-37767553 | Msa0679680:intron | 40.0% |
| !! | GTGAGTTGATGGTTATGATG+TGG | - | chr4_4:37767827-37767846 | Msa0679680:intron | 40.0% |
| GGTGTTTCACAATACGACAA+TGG | + | chr4_4:37768043-37768062 | None:intergenic | 40.0% | |
| GTCAACGGTCGAAAGAATAA+TGG | + | chr4_4:37768522-37768541 | None:intergenic | 40.0% | |
| ! | TTCTTTCGACCGTTGACTAT+TGG | - | chr4_4:37768525-37768544 | Msa0679680:intron | 40.0% |
| CACCACAATCCAATAGTCAA+CGG | + | chr4_4:37768537-37768556 | None:intergenic | 40.0% | |
| GAATACCATCAAAGTAGACC+TGG | - | chr4_4:37768697-37768716 | Msa0679680:intron | 40.0% | |
| ! | CAGATAACCCTTTTATCAGG+GGG | - | chr4_4:37768891-37768910 | Msa0679680:intron | 40.0% |
| ! | AGATAACCCTTTTATCAGGG+GGG | - | chr4_4:37768892-37768911 | Msa0679680:intron | 40.0% |
| TTCAAGGCCATAGAACTAGT+CGG | + | chr4_4:37769002-37769021 | None:intergenic | 40.0% | |
| ! | GCTTTTCTGTTTATGGGGTA+TGG | - | chr4_4:37769150-37769169 | Msa0679680:CDS | 40.0% |
| TGTTTATGGGGTATGGTAGT+TGG | - | chr4_4:37769157-37769176 | Msa0679680:CDS | 40.0% | |
| !! | AATTTGGTGTTAGGATGTGG+AGG | - | chr4_4:37769186-37769205 | Msa0679680:CDS | 40.0% |
| TTGGTATCCATCAGAACTGT+TGG | + | chr4_4:37769602-37769621 | None:intergenic | 40.0% | |
| ! | ATTGGCTCTCATCTGTATCT+TGG | + | chr4_4:37769710-37769729 | None:intergenic | 40.0% |
| TCGTGAACATTGAAGGTCTT+TGG | + | chr4_4:37769751-37769770 | None:intergenic | 40.0% | |
| CAAAACGACAGATAGCTGAA+TGG | - | chr4_4:37769773-37769792 | Msa0679680:CDS | 40.0% | |
| CTGAAATGACAGATCCAAAG+TGG | - | chr4_4:37769981-37770000 | Msa0679680:intron | 40.0% | |
| AGGAGGAATAGGTCTCTATT+GGG | + | chr4_4:37770046-37770065 | None:intergenic | 40.0% | |
| AAGGAGGAATAGGTCTCTAT+TGG | + | chr4_4:37770047-37770066 | None:intergenic | 40.0% | |
| GTATGAGAAGTGAAGCTTGA+AGG | + | chr4_4:37770066-37770085 | None:intergenic | 40.0% | |
| CACCTTTCTCTTCCTTAAGT+TGG | - | chr4_4:37770108-37770127 | Msa0679680:intron | 40.0% | |
| ACCCAACTTAAGGAAGAGAA+AGG | + | chr4_4:37770113-37770132 | None:intergenic | 40.0% | |
| !! | ATTATAAAGGGCGTTGTCGT+GGG | + | chr4_4:37770195-37770214 | None:intergenic | 40.0% |
| ! | TGGCAAAGTGAGTTAGTTTG+GGG | + | chr4_4:37770231-37770250 | None:intergenic | 40.0% |
| GAACGTTAAACACTGGAGTA+TGG | + | chr4_4:37770251-37770270 | None:intergenic | 40.0% | |
| GAACATGGAACGTTAAACAC+TGG | + | chr4_4:37770258-37770277 | None:intergenic | 40.0% | |
| ! | TAGTTTTCTTCCTACCCTTG+TGG | + | chr4_4:37770411-37770430 | None:intergenic | 40.0% |
| !! | AAAACTACCGACTCTGAAAG+TGG | - | chr4_4:37770424-37770443 | Msa0679680:intron | 40.0% |
| !! | AAACTACCGACTCTGAAAGT+GGG | - | chr4_4:37770425-37770444 | Msa0679680:intron | 40.0% |
| ATTTAAACCAACGACGTTGG+TGG | - | chr4_4:37770677-37770696 | Msa0679680:intron | 40.0% | |
| ATTTAAACCACCAACGTCGT+TGG | + | chr4_4:37770687-37770706 | None:intergenic | 40.0% | |
| CTAAAAGATCTGCTCCATGT+TGG | + | chr4_4:37770768-37770787 | None:intergenic | 40.0% | |
| GAATGAGCGTCACATAAAAG+CGG | + | chr4_4:37771037-37771056 | None:intergenic | 40.0% | |
| CTCTGCAAGCAAAACATGAA+TGG | + | chr4_4:37771136-37771155 | None:intergenic | 40.0% | |
| ! | TGTTTTGCTTGCAGAGCTAA+TGG | - | chr4_4:37771140-37771159 | Msa0679680:five_prime_UTR | 40.0% |
| GGAATTGCAGAGCAAATTTG+AGG | - | chr4_4:37771161-37771180 | Msa0679680:five_prime_UTR | 40.0% | |
| GACAAGGGAAAAAGAGATGG+TGG | + | chr4_4:37766099-37766118 | None:intergenic | 45.0% | |
| !! | GGTCAGATTGCGAGTTTTAG+TGG | + | chr4_4:37766141-37766160 | None:intergenic | 45.0% |
| ! | GACACCTCCGGAATCAATTT+TGG | - | chr4_4:37766649-37766668 | Msa0679680:intron | 45.0% |
| ! | GGAACCAAAATTGATTCCGG+AGG | + | chr4_4:37766656-37766675 | None:intergenic | 45.0% |
| GCAGCTTGTAAAGGGGAAAA+AGG | - | chr4_4:37766963-37766982 | Msa0679680:intron | 45.0% | |
| ACATCGTGTGTATGGCTATG+CGG | + | chr4_4:37767188-37767207 | None:intergenic | 45.0% | |
| TAGCCATACACACGATGTGT+CGG | - | chr4_4:37767190-37767209 | Msa0679680:intron | 45.0% | |
| TGATCACGGGATGCAAGTTA+CGG | - | chr4_4:37767411-37767430 | Msa0679680:intron | 45.0% | |
| GCAAGTTACGGAGGGAAAAA+AGG | - | chr4_4:37767423-37767442 | Msa0679680:intron | 45.0% | |
| AGTAGGGTGGATGTTGGAAA+AGG | + | chr4_4:37768475-37768494 | None:intergenic | 45.0% | |
| ATGGTCACTCTTAGGCAGTA+GGG | + | chr4_4:37768491-37768510 | None:intergenic | 45.0% | |
| TATGGTCACTCTTAGGCAGT+AGG | + | chr4_4:37768492-37768511 | None:intergenic | 45.0% | |
| ! | GACCGTTGACTATTGGATTG+TGG | - | chr4_4:37768532-37768551 | Msa0679680:CDS | 45.0% |
| GGAATACTCAAACTGCAGAG+TGG | - | chr4_4:37768668-37768687 | Msa0679680:intron | 45.0% | |
| TCAAACTGCAGAGTGGATCA+TGG | - | chr4_4:37768675-37768694 | Msa0679680:intron | 45.0% | |
| AAGTCACTTCTATGCTGCCT+AGG | + | chr4_4:37769356-37769375 | None:intergenic | 45.0% | |
| GAAACAAGGCATGTTGGGTA+AGG | + | chr4_4:37769529-37769548 | None:intergenic | 45.0% | |
| ATCCATCAGAACTGTTGGTC+AGG | + | chr4_4:37769597-37769616 | None:intergenic | 45.0% | |
| CGTTTCGGGAGACTATTGAT+TGG | + | chr4_4:37769621-37769640 | None:intergenic | 45.0% | |
| TACAATGGTCAAGGTTCTCG+TGG | + | chr4_4:37769960-37769979 | None:intergenic | 45.0% | |
| GGCTCATTAGGTAACCACTT+TGG | + | chr4_4:37769998-37770017 | None:intergenic | 45.0% | |
| AGTGGTTACCTAATGAGCCA+CGG | - | chr4_4:37769999-37770018 | Msa0679680:intron | 45.0% | |
| TGTTTGTTCCGTGGCTCATT+AGG | + | chr4_4:37770010-37770029 | None:intergenic | 45.0% | |
| AGCCACGGAACAAACATCAA+GGG | - | chr4_4:37770014-37770033 | Msa0679680:intron | 45.0% | |
| TTCCCTTGATGTTTGTTCCG+TGG | + | chr4_4:37770019-37770038 | None:intergenic | 45.0% | |
| GTGAAGCTTGAAGGAGGAAT+AGG | + | chr4_4:37770057-37770076 | None:intergenic | 45.0% | |
| TGAGAAGTGAAGCTTGAAGG+AGG | + | chr4_4:37770063-37770082 | None:intergenic | 45.0% | |
| ATATTCTTCAGCACCCTAGC+AGG | - | chr4_4:37770150-37770169 | Msa0679680:intron | 45.0% | |
| !! | GATTATAAAGGGCGTTGTCG+TGG | + | chr4_4:37770196-37770215 | None:intergenic | 45.0% |
| AGCAATCCCACTTTCAGAGT+CGG | + | chr4_4:37770434-37770453 | None:intergenic | 45.0% | |
| TCTGAAAGTGGGATTGCTGT+GGG | - | chr4_4:37770436-37770455 | Msa0679680:intron | 45.0% | |
| AACATGTTAATTAGGGGGGG+TGG | - | chr4_4:37770721-37770740 | Msa0679680:intron | 45.0% | |
| !! | AAATAATTTATTCTTAATAA+CGG | - | chr4_4:37766444-37766463 | Msa0679680:intron | 5.0% |
| ! | TCGAAGGGAGGTGCAATTAG+CGG | + | chr4_4:37766162-37766181 | None:intergenic | 50.0% |
| GTCAATCGCGGAATCTCGAA+GGG | + | chr4_4:37766177-37766196 | None:intergenic | 50.0% | |
| TGTCAATCGCGGAATCTCGA+AGG | + | chr4_4:37766178-37766197 | None:intergenic | 50.0% | |
| ! | GGGAAAAAGGGCATACGAAC+AGG | - | chr4_4:37766877-37766896 | Msa0679680:CDS | 50.0% |
| GTCGGAAACCACCAAGTAGT+CGG | - | chr4_4:37767161-37767180 | Msa0679680:intron | 50.0% | |
| CATCGTGTGTATGGCTATGC+GGG | + | chr4_4:37767187-37767206 | None:intergenic | 50.0% | |
| CAACCGACACATCGTGTGTA+TGG | + | chr4_4:37767196-37767215 | None:intergenic | 50.0% | |
| GCCGGATGCCTTAATGCAAT+TGG | + | chr4_4:37767229-37767248 | None:intergenic | 50.0% | |
| TGAGCAGTCATCATCTCCAG+AGG | + | chr4_4:37768195-37768214 | None:intergenic | 50.0% | |
| GGAGATGATGACTGCTCACA+TGG | - | chr4_4:37768197-37768216 | Msa0679680:intron | 50.0% | |
| TTAGGCAGTAGGGTGGATGT+TGG | + | chr4_4:37768481-37768500 | None:intergenic | 50.0% | |
| CCAACCCAGGTCTACTTTGA+TGG | + | chr4_4:37768705-37768724 | None:intergenic | 50.0% | |
| CCATCAAAGTAGACCTGGGT+TGG | - | chr4_4:37768702-37768721 | Msa0679680:intron | 50.0% | |
| ! | TCAAAGTAGACCTGGGTTGG+AGG | - | chr4_4:37768705-37768724 | Msa0679680:intron | 50.0% |
| ! | TTTTGCAACACCTCCAACCC+AGG | + | chr4_4:37768718-37768737 | None:intergenic | 50.0% |
| CACGCAGGATACTGAGTCAA+TGG | + | chr4_4:37769283-37769302 | None:intergenic | 50.0% | |
| ACAAGGCATGTTGGGTAAGG+AGG | + | chr4_4:37769526-37769545 | None:intergenic | 50.0% | |
| ! | GTCCTGACCAACAGTTCTGA+TGG | - | chr4_4:37769592-37769611 | Msa0679680:CDS | 50.0% |
| TGAGAGCCAATAATGGCCTC+TGG | - | chr4_4:37769719-37769738 | Msa0679680:intron | 50.0% | |
| AGCCAATAATGGCCTCTGGT+GGG | - | chr4_4:37769723-37769742 | Msa0679680:intron | 50.0% | |
| AACCCACCAGAGGCCATTAT+TGG | + | chr4_4:37769728-37769747 | None:intergenic | 50.0% | |
| GAGCCACGGAACAAACATCA+AGG | - | chr4_4:37770013-37770032 | Msa0679680:intron | 50.0% | |
| AAAGAAGCCCTTGCTGCAGA+AGG | - | chr4_4:37770364-37770383 | Msa0679680:five_prime_UTR | 50.0% | |
| AAGAAGCCCTTGCTGCAGAA+GGG | - | chr4_4:37770365-37770384 | Msa0679680:five_prime_UTR | 50.0% | |
| ACGGTGGTTCAACACCACAA+GGG | - | chr4_4:37770394-37770413 | Msa0679680:intron | 50.0% | |
| TGGTTCAACACCACAAGGGT+AGG | - | chr4_4:37770398-37770417 | Msa0679680:intron | 50.0% | |
| ! | CTCTGAAAGTGGGATTGCTG+TGG | - | chr4_4:37770435-37770454 | Msa0679680:intron | 50.0% |
| ATGTTAATTAGGGGGGGTGG+CGG | - | chr4_4:37770724-37770743 | Msa0679680:intron | 50.0% | |
| AATCGCGGAATCTCGAAGGG+AGG | + | chr4_4:37766174-37766193 | None:intergenic | 55.0% | |
| TCACGGGATGCAAGTTACGG+AGG | - | chr4_4:37767414-37767433 | Msa0679680:intron | 55.0% | |
| CACGGGATGCAAGTTACGGA+GGG | - | chr4_4:37767415-37767434 | Msa0679680:intron | 55.0% | |
| !! | GTGAGTTGATGACAGTGGCG+TGG | - | chr4_4:37767545-37767564 | Msa0679680:intron | 55.0% |
| GTCACTCTTAGGCAGTAGGG+TGG | + | chr4_4:37768488-37768507 | None:intergenic | 55.0% | |
| AGAACTGTTGGTCAGGACGC+AGG | + | chr4_4:37769590-37769609 | None:intergenic | 55.0% | |
| GAGCCAATAATGGCCTCTGG+TGG | - | chr4_4:37769722-37769741 | Msa0679680:intron | 55.0% | |
| !! | AGGTCTTTGGAACCCACCAG+AGG | + | chr4_4:37769738-37769757 | None:intergenic | 55.0% |
| GGCCATTGCTGCAGCAACAA+TGG | - | chr4_4:37769867-37769886 | Msa0679680:CDS | 55.0% | |
| CGCCATTGTTGCTGCAGCAA+TGG | + | chr4_4:37769872-37769891 | None:intergenic | 55.0% | |
| GGCGCACATGTTTCAGCAAG+TGG | - | chr4_4:37769888-37769907 | Msa0679680:intron | 55.0% | |
| CTAGGCCTTTCGTCCTGCTA+GGG | + | chr4_4:37770166-37770185 | None:intergenic | 55.0% | |
| ACTAGGCCTTTCGTCCTGCT+AGG | + | chr4_4:37770167-37770186 | None:intergenic | 55.0% | |
| !! | CGTTGTCGTGGGAGAGTACT+AGG | + | chr4_4:37770184-37770203 | None:intergenic | 55.0% |
| AGAAGCCCTTGCTGCAGAAG+GGG | - | chr4_4:37770366-37770385 | Msa0679680:five_prime_UTR | 55.0% | |
| GACGGTGGTTCAACACCACA+AGG | - | chr4_4:37770393-37770412 | Msa0679680:intron | 55.0% | |
| AAGTGGGATTGCTGTGGGCT+CGG | - | chr4_4:37770441-37770460 | Msa0679680:intron | 55.0% | |
| TGTTAATTAGGGGGGGTGGC+GGG | - | chr4_4:37770725-37770744 | Msa0679680:intron | 55.0% | |
| TGCAGCAGTTGAGAGCTGCT+AGG | - | chr4_4:37771199-37771218 | Msa0679680:five_prime_UTR | 55.0% | |
| TATGCGGGCCGACTACTTGG+TGG | + | chr4_4:37767172-37767191 | None:intergenic | 60.0% | |
| CAGCACCCTAGCAGGACGAA+AGG | - | chr4_4:37770158-37770177 | Msa0679680:intron | 60.0% | |
| GAAGCCCTTGCTGCAGAAGG+GGG | - | chr4_4:37770367-37770386 | Msa0679680:five_prime_UTR | 60.0% | |
| CCATCCCCCTTCTGCAGCAA+GGG | + | chr4_4:37770374-37770393 | None:intergenic | 60.0% | |
| TCCATCCCCCTTCTGCAGCA+AGG | + | chr4_4:37770375-37770394 | None:intergenic | 60.0% | |
| TGCTGCAGAAGGGGGATGGA+CGG | - | chr4_4:37770375-37770394 | Msa0679680:five_prime_UTR | 60.0% | |
| GGCTATGCGGGCCGACTACT+TGG | + | chr4_4:37767175-37767194 | None:intergenic | 65.0% | |
| CCCTTGCTGCAGAAGGGGGA+TGG | - | chr4_4:37770371-37770390 | Msa0679680:five_prime_UTR | 65.0% | |
| TGCAGAAGGGGGATGGACGG+TGG | - | chr4_4:37770378-37770397 | Msa0679680:five_prime_UTR | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 37766074 | 37771236 | 37766074 | ID=Msa0679680;Name=Msa0679680 |
| chr4_4 | mRNA | 37766074 | 37771236 | 37766074 | ID=Msa0679680-mRNA-1;Parent=Msa0679680;Name=Msa0679680-mRNA-1;_AED=0.20;_eAED=0.20;_QI=207|0.75|0.77|1|1|0.88|9|0|330 |
| chr4_4 | exon | 37766074 | 37766139 | 37766074 | ID=Msa0679680-mRNA-1:exon:8879;Parent=Msa0679680-mRNA-1 |
| chr4_4 | exon | 37766749 | 37766958 | 37766749 | ID=Msa0679680-mRNA-1:exon:8878;Parent=Msa0679680-mRNA-1 |
| chr4_4 | exon | 37768527 | 37768624 | 37768527 | ID=Msa0679680-mRNA-1:exon:8877;Parent=Msa0679680-mRNA-1 |
| chr4_4 | exon | 37769083 | 37769214 | 37769083 | ID=Msa0679680-mRNA-1:exon:8876;Parent=Msa0679680-mRNA-1 |
| chr4_4 | exon | 37769298 | 37769390 | 37769298 | ID=Msa0679680-mRNA-1:exon:8875;Parent=Msa0679680-mRNA-1 |
| chr4_4 | exon | 37769484 | 37769615 | 37769484 | ID=Msa0679680-mRNA-1:exon:8874;Parent=Msa0679680-mRNA-1 |
| chr4_4 | exon | 37769766 | 37769900 | 37769766 | ID=Msa0679680-mRNA-1:exon:8873;Parent=Msa0679680-mRNA-1 |
| chr4_4 | exon | 37770226 | 37770411 | 37770226 | ID=Msa0679680-mRNA-1:exon:8872;Parent=Msa0679680-mRNA-1 |
| chr4_4 | exon | 37771092 | 37771236 | 37771092 | ID=Msa0679680-mRNA-1:exon:8871;Parent=Msa0679680-mRNA-1 |
| chr4_4 | five_prime_UTR | 37771092 | 37771236 | 37771092 | ID=Msa0679680-mRNA-1:five_prime_utr;Parent=Msa0679680-mRNA-1 |
| chr4_4 | five_prime_UTR | 37770350 | 37770411 | 37770350 | ID=Msa0679680-mRNA-1:five_prime_utr;Parent=Msa0679680-mRNA-1 |
| chr4_4 | CDS | 37770226 | 37770349 | 37770226 | ID=Msa0679680-mRNA-1:cds;Parent=Msa0679680-mRNA-1 |
| chr4_4 | CDS | 37769766 | 37769900 | 37769766 | ID=Msa0679680-mRNA-1:cds;Parent=Msa0679680-mRNA-1 |
| chr4_4 | CDS | 37769484 | 37769615 | 37769484 | ID=Msa0679680-mRNA-1:cds;Parent=Msa0679680-mRNA-1 |
| chr4_4 | CDS | 37769298 | 37769390 | 37769298 | ID=Msa0679680-mRNA-1:cds;Parent=Msa0679680-mRNA-1 |
| chr4_4 | CDS | 37769083 | 37769214 | 37769083 | ID=Msa0679680-mRNA-1:cds;Parent=Msa0679680-mRNA-1 |
| chr4_4 | CDS | 37768527 | 37768624 | 37768527 | ID=Msa0679680-mRNA-1:cds;Parent=Msa0679680-mRNA-1 |
| chr4_4 | CDS | 37766749 | 37766958 | 37766749 | ID=Msa0679680-mRNA-1:cds;Parent=Msa0679680-mRNA-1 |
| chr4_4 | CDS | 37766074 | 37766139 | 37766074 | ID=Msa0679680-mRNA-1:cds;Parent=Msa0679680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
