AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0788120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788120 MtrunA17_Chr5g0446951 99.857 699 1 0 1 699 1 699 0.0 1419
Msa0788120 MtrunA17_Chr5g0446941 99.857 699 1 0 1 699 1 699 0.0 1419
Msa0788120 MtrunA17_Chr6g0469201 88.160 701 79 3 1 699 1 699 0.0 1186
Msa0788120 MtrunA17_Chr1g0202601 83.429 700 92 3 1 699 6 682 0.0 1110
Msa0788120 MtrunA17_Chr1g0156731 48.867 706 320 8 5 673 78 779 0.0 642
Msa0788120 MtrunA17_Chr5g0447581 45.562 676 345 10 5 667 90 755 0.0 577
Msa0788120 MtrunA17_Chr5g0420861 45.634 710 354 13 5 698 82 775 0.0 577
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788120 AT5G56000.1 90.714 700 63 2 1 699 1 699 0.0 1205
Msa0788120 AT5G56030.1 92.286 700 52 2 1 699 1 699 0.0 1196
Msa0788120 AT5G56010.1 92.000 700 54 2 1 699 1 699 0.0 1194
Msa0788120 AT5G56030.2 88.615 729 52 3 1 699 1 728 0.0 1181
Msa0788120 AT5G52640.1 85.185 702 99 5 1 699 1 700 0.0 1148
Msa0788120 AT4G24190.1 50.356 703 310 8 5 672 77 775 0.0 643
Msa0788120 AT4G24190.2 50.356 703 310 8 5 672 77 775 0.0 642
Msa0788120 AT2G04030.1 47.485 676 329 11 5 668 77 738 0.0 597
Msa0788120 AT3G07770.1 45.495 677 346 10 5 668 95 761 0.0 590
Msa0788120 AT3G07770.3 45.495 677 346 10 5 668 95 761 0.0 590
Msa0788120 AT3G07770.2 45.495 677 346 10 5 668 95 761 0.0 590
Msa0788120 AT2G04030.2 47.033 674 332 11 5 668 77 735 0.0 588

Find 193 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGGGACAGTTGGAGTTTA+AGG 0.160886 5_2:+74459357 Msa0788120:CDS
TTCGCAACGAATATTAATTT+AGG 0.229845 5_2:-74460835 None:intergenic
GAGACTGCTCTTCTTACTTC+TGG 0.243959 5_2:+74460366 Msa0788120:CDS
TTTCCTCAGCTCCTCCATTA+TGG 0.246479 5_2:-74460286 None:intergenic
ACAAGAGACGTTTGCTTTCC+AGG 0.252769 5_2:+74457447 Msa0788120:CDS
TTCTCAACCCAAAGAGAAAT+TGG 0.256773 5_2:-74459064 None:intergenic
TGAACAAGCAGAAGCCTATT+TGG 0.260701 5_2:+74459233 Msa0788120:CDS
TTAGCTATCCAATTTCTCTT+TGG 0.269210 5_2:+74459056 Msa0788120:CDS
TTCCTCAGCTCCTCCATTAT+GGG 0.271018 5_2:-74460285 None:intergenic
CTTGATGAGCCCAACACTTT+TGG 0.271765 5_2:+74460396 Msa0788120:CDS
TAGCTATCCAATTTCTCTTT+GGG 0.282969 5_2:+74459057 Msa0788120:CDS
ACTATCATTGATAGTGGAAT+TGG 0.289715 5_2:+74458571 Msa0788120:CDS
GTGTTAATTGTGACTATCTT+TGG 0.300881 5_2:+74460709 Msa0788120:three_prime_UTR
TCCTCCATTATGGGGTTCTC+AGG 0.306389 5_2:-74460276 None:intergenic
TTGTTCCGCCATTGCCGATC+TGG 0.322186 5_2:-74457428 None:intergenic
CAATGATTGGGAAGAGCATT+TGG 0.340719 5_2:+74459315 Msa0788120:CDS
TGAAGTAGTTTCTATTGTTT+AGG 0.357932 5_2:+74460555 Msa0788120:three_prime_UTR
TGTTTAGTGACTGGTGAGTA+TGG 0.358330 5_2:+74460156 Msa0788120:CDS
TCATGCTAACTTACCAGCTT+TGG 0.369152 5_2:-74458599 None:intergenic
TCAGGCTTCCTCATCCAAAT+AGG 0.372502 5_2:-74459247 None:intergenic
GACATACAGCTTGATGTTGT+TGG 0.373069 5_2:-74459437 None:intergenic
GTCTGGTACCAAGGAATTCA+TGG 0.376590 5_2:+74458748 Msa0788120:CDS
AATGACATTTACTACATTAC+CGG 0.381181 5_2:+74459829 Msa0788120:CDS
ACAAGAGTCTCACCAATGAT+TGG 0.384273 5_2:+74459302 Msa0788120:CDS
ACATACAGCTTGATGTTGTT+GGG 0.394439 5_2:-74459436 None:intergenic
TGTTTGCTCATCGTAAGTTC+TGG 0.395191 5_2:+74460687 Msa0788120:three_prime_UTR
AAGGTGTTGTTGGTCTTGTC+AGG 0.401362 5_2:-74458547 None:intergenic
TCAACAGAACAAGATTCTTA+AGG 0.404319 5_2:+74459573 Msa0788120:CDS
GAAGAAGGAAGAGGAGGGTA+AGG 0.417477 5_2:+74459129 Msa0788120:CDS
GGTGCTGATGTTAGCATGAT+TGG 0.418135 5_2:+74458785 Msa0788120:CDS
CGAGGAAGAGAAGAAGGAAG+AGG 0.429375 5_2:+74459120 Msa0788120:CDS
GGTCATGTCATCACCACTCT+TGG 0.434025 5_2:-74459767 None:intergenic
GGAAGAGGAGGGTAAGGTTG+AGG 0.435286 5_2:+74459135 Msa0788120:CDS
CATGAAGGCACAGGCTTTGA+GGG 0.435413 5_2:+74460203 Msa0788120:CDS
ACAAGATTCTTAAGGTCATC+AGG 0.437555 5_2:+74459581 Msa0788120:CDS
CAACCCTGAGAACCCCATAA+TGG 0.440515 5_2:+74460272 Msa0788120:CDS
GTTAGCATGATTGGACAGTT+TGG 0.443805 5_2:+74458794 Msa0788120:CDS
TTTGTGTCAAAGAGATCAAA+AGG 0.446679 5_2:-74459406 None:intergenic
CCTTGAGAAGCTTAGAAAGA+AGG 0.450145 5_2:+74459885 Msa0788120:CDS
CTAGTGTCTGCAACTAAAGA+AGG 0.450314 5_2:+74459985 Msa0788120:CDS
AATGATAGTCAAGGTGTTGT+TGG 0.456218 5_2:-74458557 None:intergenic
CAAGAGTCTCACCAATGATT+GGG 0.462392 5_2:+74459303 Msa0788120:CDS
CAAATGCTCTTCCCAATCAT+TGG 0.463958 5_2:-74459314 None:intergenic
TCGTCCTTTGTGATCTCCTC+AGG 0.466562 5_2:-74459265 None:intergenic
TGGTCAGCTCAAGGAATTTG+AGG 0.468755 5_2:+74459954 Msa0788120:CDS
TTGAGGGATAGCAGCATGGC+TGG 0.470021 5_2:+74460219 Msa0788120:CDS
GGTGGTAACAATAACCTTCT+CGG 0.473999 5_2:-74458846 None:intergenic
ACCTTGACTATCATTGATAG+TGG 0.474059 5_2:+74458565 Msa0788120:CDS
TCATGAAGGCACAGGCTTTG+AGG 0.476598 5_2:+74460202 Msa0788120:CDS
TATGGCTTCCATGAATTCCT+TGG 0.477216 5_2:-74458756 None:intergenic
AGTGAATGACCCACCAGCTT+GGG 0.479426 5_2:-74458903 None:intergenic
TGAGGACGAGGAAGAGAAGA+AGG 0.480741 5_2:+74459114 Msa0788120:CDS
AGAATCAAGCTTGCTCTTGT+CGG 0.482487 5_2:-74458497 None:intergenic
CTTTCTAAGCTTCTCAAGGA+AGG 0.483028 5_2:-74459881 None:intergenic
AGATCAAAAGGTGCTCTCTT+CGG 0.483306 5_2:-74459394 None:intergenic
CAACTGGTGAAGCTCTTGGC+AGG 0.483720 5_2:+74458939 Msa0788120:CDS
CTTTGAAATTGCTGAGAACA+AGG 0.486596 5_2:+74459636 Msa0788120:CDS
GGAAGAGAAGAAGGAAGAGG+AGG 0.487208 5_2:+74459123 Msa0788120:CDS
TGTTAAGCACTTCTCTGTTG+AGG 0.488225 5_2:+74459339 Msa0788120:CDS
CATGTCATCACCACTCTTGG+TGG 0.488480 5_2:-74459764 None:intergenic
ATTCTGTCCTTCCTTCATCC+TGG 0.488551 5_2:-74459809 None:intergenic
GTTAAGCACTTCTCTGTTGA+GGG 0.489262 5_2:+74459340 Msa0788120:CDS
CAAAGCTTGCTGATTTGCTC+AGG 0.489387 5_2:+74459734 Msa0788120:CDS
AACATCAGCACCAGCAGCTA+TGG 0.489580 5_2:-74458774 None:intergenic
ATTTCTCTTGAAATGTTAAG+TGG 0.491469 5_2:-74459547 None:intergenic
CTTCTCTAAGAACTTGAAGC+TGG 0.492825 5_2:+74459684 Msa0788120:CDS
GGTGTCTAATGAATGGTCTT+TGG 0.492991 5_2:+74459210 Msa0788120:CDS
TAGCTTTGTGAAGGGTATTG+TGG 0.493429 5_2:+74459510 Msa0788120:CDS
GGAACGCCGTCTGAAGGACT+TGG 0.493605 5_2:+74459012 Msa0788120:CDS
AACAGCTTTCTTGCTTTCAC+CGG 0.494202 5_2:-74459848 None:intergenic
CTTCTCTGTTGAGGGACAGT+TGG 0.494681 5_2:+74459348 Msa0788120:CDS
CAATCTTTGCAAGGTGATCA+AGG 0.496155 5_2:+74460071 Msa0788120:CDS
GTAGTTTCTATTGTTTAGGA+AGG 0.496454 5_2:+74460559 Msa0788120:three_prime_UTR
AGCTTCACCAGTTGTATCCC+TGG 0.498334 5_2:-74458930 None:intergenic
CTTGAGAAGCTTAGAAAGAA+GGG 0.499126 5_2:+74459886 Msa0788120:CDS
AGTAGATGAGGAGAAAGAAA+AGG 0.499471 5_2:+74459159 Msa0788120:CDS
GGGTGACAAGGTTGAGAAAG+TGG 0.499707 5_2:+74460101 Msa0788120:CDS
CTTCACAAAGCTAAGATACT+CGG 0.499785 5_2:-74459500 None:intergenic
TTCATCATCATTGTGCTTGG+TGG 0.500075 5_2:-74458864 None:intergenic
GGAATTGGAATGACCAAAGC+TGG 0.500501 5_2:+74458586 Msa0788120:CDS
GATACAACTGGTGAAGCTCT+TGG 0.501895 5_2:+74458935 Msa0788120:CDS
CTAGGTACCATTGCTAGGTC+TGG 0.502477 5_2:+74458731 Msa0788120:CDS
TGCTTACCTTGTTGCCGAGA+AGG 0.502623 5_2:+74458832 Msa0788120:CDS
GAAGAGAAGAAGGAAGAGGA+GGG 0.502813 5_2:+74459124 Msa0788120:CDS
TCTCCTTGCTGTTTAGTGAC+TGG 0.506819 5_2:+74460147 Msa0788120:CDS
CAAGGTGATCAAGGAGGTGT+TGG 0.509412 5_2:+74460080 Msa0788120:CDS
GTGGGTCATTCACTGTGACC+AGG 0.512028 5_2:+74458912 Msa0788120:CDS
TTCTAAGCTTCTCAAGGAAG+GGG 0.514416 5_2:-74459879 None:intergenic
TAAGGTCATCAGGAAGAACT+TGG 0.516506 5_2:+74459591 Msa0788120:CDS
CCTCCATTATGGGGTTCTCA+GGG 0.520350 5_2:-74460275 None:intergenic
CTTCATGATCCTCTCCATGT+TGG 0.521693 5_2:-74460187 None:intergenic
ATGATTGGACAGTTTGGTGT+TGG 0.524590 5_2:+74458800 Msa0788120:CDS
TGCTGACATGCCACCATTGG+AGG 0.530142 5_2:+74460482 Msa0788120:CDS
TTTCTAAGCTTCTCAAGGAA+GGG 0.531468 5_2:-74459880 None:intergenic
ATCCTGTTGCCAAAAGTGTT+GGG 0.532827 5_2:-74460405 None:intergenic
ATTCACAGGATGCTCAAGCT+TGG 0.534491 5_2:+74460426 Msa0788120:CDS
TCAGCATCAGCTTCCTCCAA+TGG 0.535356 5_2:-74460495 None:intergenic
CATTGCTAGGTCTGGTACCA+AGG 0.535688 5_2:+74458739 Msa0788120:CDS
TTAAGGAGGTGTCTAATGAA+TGG 0.538054 5_2:+74459203 Msa0788120:CDS
AATCCTGTTGCCAAAAGTGT+TGG 0.544511 5_2:-74460406 None:intergenic
CTGTTCATCATCATTGTGCT+TGG 0.544768 5_2:-74458867 None:intergenic
TGATGCTGACATGCCACCAT+TGG 0.545200 5_2:+74460479 Msa0788120:CDS
TAAGGTTGAGGAAGTAGATG+AGG 0.545318 5_2:+74459147 Msa0788120:CDS
CGAGTATCTTAGCTTTGTGA+AGG 0.545418 5_2:+74459501 Msa0788120:CDS
CCTTCTTTCTAAGCTTCTCA+AGG 0.546242 5_2:-74459885 None:intergenic
TTCATGGAAGCCATAGCTGC+TGG 0.547466 5_2:+74458764 Msa0788120:CDS
GGTCAGCTCAAGGAATTTGA+GGG 0.548038 5_2:+74459955 Msa0788120:CDS
TCCTCAGCTCCTCCATTATG+GGG 0.548965 5_2:-74460284 None:intergenic
ACCAACAGCATATTCATCAA+TGG 0.549314 5_2:-74459935 None:intergenic
GTGTGGGAGTCCCAAGCTGG+TGG 0.550695 5_2:+74458893 Msa0788120:CDS
GGAGAGGATCATGAAGGCAC+AGG 0.554892 5_2:+74460194 Msa0788120:CDS
CAGCTTCAAGTTCTTAGAGA+AGG 0.556190 5_2:-74459683 None:intergenic
GGAAACGTGCTGATGCGGAC+AGG 0.560251 5_2:+74460304 Msa0788120:CDS
TAAAATAACTCTCATCCTCA+AGG 0.561419 5_2:+74458967 Msa0788120:CDS
TAGTGACTGGTGAGTATGGT+TGG 0.563826 5_2:+74460160 Msa0788120:CDS
CCAGATTTGGTGAACAACCT+AGG 0.564348 5_2:+74458713 Msa0788120:intron
CAGTGAATGACCCACCAGCT+TGG 0.566153 5_2:-74458904 None:intergenic
GGACTATGTTACCAGGATGA+AGG 0.567325 5_2:+74459798 Msa0788120:CDS
GAAAGAGATTTCTGATGATG+AGG 0.568419 5_2:+74459096 Msa0788120:CDS
TCTTGAGGAACGCCGTCTGA+AGG 0.568654 5_2:+74459006 Msa0788120:CDS
CAAAAGTGTTGGGCTCATCA+AGG 0.569013 5_2:-74460395 None:intergenic
ATAATGTGAATGAACAACTC+TGG 0.569519 5_2:-74458523 None:intergenic
ACTGTGACCAGGGATACAAC+TGG 0.570046 5_2:+74458923 Msa0788120:CDS
AGAGGGAAGCAAGATGGAAG+AGG 0.571151 5_2:+74460521 Msa0788120:CDS
CAATAACCTTCTCGGCAACA+AGG 0.573151 5_2:-74458838 None:intergenic
TTCTCTAAGAACTTGAAGCT+GGG 0.573524 5_2:+74459685 Msa0788120:CDS
TGGGTCATTCACTGTGACCA+GGG 0.573714 5_2:+74458913 Msa0788120:CDS
CAAGGAGGTGTTGGGTGACA+AGG 0.575150 5_2:+74460089 Msa0788120:CDS
GGTAACATAGTCCTTGAGGC+TGG 0.577318 5_2:-74459788 None:intergenic
GGGATATGAAGTGATTTACA+TGG 0.578493 5_2:+74459906 Msa0788120:CDS
ACAACCTAGGTACCATTGCT+AGG 0.579010 5_2:+74458726 Msa0788120:CDS
TCTCAAACAGCAAGAGAACA+AGG 0.580225 5_2:-74460347 None:intergenic
TGTCGGTCAAGCCCTCAAAA+CGG 0.582332 5_2:-74458480 None:intergenic
CTATTGTTTAGGAAGGTGTG+AGG 0.582863 5_2:+74460566 Msa0788120:three_prime_UTR
AGCAGAAGCCTATTTGGATG+AGG 0.584932 5_2:+74459239 Msa0788120:CDS
ACTGGTGAAGCTCTTGGCAG+GGG 0.584964 5_2:+74458941 Msa0788120:CDS
GAAGTTGATTGATCTCAGCC+TGG 0.587212 5_2:-74457465 None:intergenic
AACTGGTGAAGCTCTTGGCA+GGG 0.587596 5_2:+74458940 Msa0788120:CDS
GCTGAGGAAACGTGCTGATG+CGG 0.588607 5_2:+74460299 Msa0788120:CDS
TTCACAAAGCTAAGATACTC+GGG 0.588682 5_2:-74459499 None:intergenic
CAGACCTAGCAATGGTACCT+AGG 0.590700 5_2:-74458730 None:intergenic
CATCACCACTCTTGGTGGAG+TGG 0.592725 5_2:-74459759 None:intergenic
GGCTTTGAGGGATAGCAGCA+TGG 0.597369 5_2:+74460215 Msa0788120:CDS
AGATTACAACAAGTTCTATG+AGG 0.599707 5_2:+74459660 Msa0788120:CDS
ATATGCTGTTGGTCAGCTCA+AGG 0.599835 5_2:+74459945 Msa0788120:CDS
GAAGTTCGACAATCTTTGCA+AGG 0.601872 5_2:+74460062 Msa0788120:CDS
GAAGCTGATGCTGATGCAGA+GGG 0.602230 5_2:+74460504 Msa0788120:CDS
ACCCCATAATGGAGGAGCTG+AGG 0.602360 5_2:+74460283 Msa0788120:CDS
TGATGCAGAGGGAAGCAAGA+TGG 0.604134 5_2:+74460515 Msa0788120:CDS
GATTTCTGATGATGAGGACG+AGG 0.608743 5_2:+74459102 Msa0788120:CDS
TCCTGGTAACATAGTCCTTG+AGG 0.608835 5_2:-74459792 None:intergenic
TAGTGTCTGCAACTAAAGAA+GGG 0.609080 5_2:+74459986 Msa0788120:CDS
GCCTCAAGGACTATGTTACC+AGG 0.610223 5_2:+74459791 Msa0788120:CDS
CATGTCAAGCAAGAAGACAA+TGG 0.611061 5_2:+74460245 Msa0788120:CDS
TATGTGTGGGAGTCCCAAGC+TGG 0.615041 5_2:+74458890 Msa0788120:CDS
TCCACTATCAATGATAGTCA+AGG 0.615433 5_2:-74458566 None:intergenic
GCCATTGATGAATATGCTGT+TGG 0.617134 5_2:+74459934 Msa0788120:CDS
GCTTGGTCTTAGCATTGATG+AGG 0.619021 5_2:+74460443 Msa0788120:CDS
CAACATGGAGAGGATCATGA+AGG 0.620851 5_2:+74460188 Msa0788120:CDS
GTTGAAACTTGACGAGAGTG+AGG 0.621123 5_2:+74460008 Msa0788120:CDS
TGAGCAAACAATAGCTACAC+TGG 0.624684 5_2:-74460674 None:intergenic
GGATCAACTTGAGTATCTTG+AGG 0.629396 5_2:+74458991 Msa0788120:CDS
GAGTATCTTAGCTTTGTGAA+GGG 0.631738 5_2:+74459502 Msa0788120:CDS
AGCAAGGAGAATCGACAACA+CGG 0.631988 5_2:-74460134 None:intergenic
AGGTACCACTCCACCAAGAG+TGG 0.636721 5_2:+74459754 Msa0788120:CDS
CAGGAATGACAAATCTGTCA+AGG 0.640894 5_2:+74460323 Msa0788120:CDS
GTATGGTTGGACTGCCAACA+TGG 0.641083 5_2:+74460173 Msa0788120:CDS
ACTCAAGTTGATCCTCCTTG+AGG 0.641638 5_2:-74458982 None:intergenic
TCTTAACCAAGTCCTTCAGA+CGG 0.644789 5_2:-74459018 None:intergenic
CCCTGAGAACCCCATAATGG+AGG 0.645508 5_2:+74460275 Msa0788120:CDS
TCTAAGCTTCTCAAGGAAGG+GGG 0.646828 5_2:-74459878 None:intergenic
TGTGGGAGTCCCAAGCTGGT+GGG 0.646830 5_2:+74458894 Msa0788120:CDS
GCATCAGCTTCCTCCAATGG+TGG 0.651686 5_2:-74460492 None:intergenic
AAGGTGATCAAGGAGGTGTT+GGG 0.654251 5_2:+74460081 Msa0788120:CDS
TGATGACATGACCAGCCTCA+AGG 0.657377 5_2:+74459777 Msa0788120:CDS
GTTGGACTGCCAACATGGAG+AGG 0.668192 5_2:+74460178 Msa0788120:CDS
ATTTCAGGAACGAAATAACA+AGG 0.670109 5_2:-74460785 None:intergenic
TATGTTACCAGGATGAAGGA+AGG 0.670222 5_2:+74459802 Msa0788120:CDS
GGAAGCTGATGCTGATGCAG+AGG 0.671926 5_2:+74460503 Msa0788120:CDS
ATGATGATGAACAGTATGTG+TGG 0.676362 5_2:+74458876 Msa0788120:CDS
AGTTGTCCATGATGAAAACA+CGG 0.681053 5_2:-74459462 None:intergenic
TCACCAGTCACTAAACAGCA+AGG 0.682332 5_2:-74460150 None:intergenic
GAAGGGTATTGTGGACTCTG+AGG 0.693168 5_2:+74459519 Msa0788120:CDS
CTTGAAGCTGGGTATCCATG+AGG 0.697436 5_2:+74459696 Msa0788120:CDS
AATAACTCTCATCCTCAAGG+AGG 0.699652 5_2:+74458970 Msa0788120:CDS
CTTGGTACCAGACCTAGCAA+TGG 0.700707 5_2:-74458738 None:intergenic
TTTCATCATGGACAACTGTG+AGG 0.702798 5_2:+74459468 Msa0788120:CDS
GAAGCCTGAGGAGATCACAA+AGG 0.711808 5_2:+74459261 Msa0788120:CDS
TGATGATGAACAGTATGTGT+GGG 0.717373 5_2:+74458877 Msa0788120:CDS
TATTTGGATGAGGAAGCCTG+AGG 0.739589 5_2:+74459249 Msa0788120:CDS
GGTGCTACGAGCAAAGAACG+CGG 0.760872 5_2:-74460764 None:intergenic
TCTTTGCAAGGTGATCAAGG+AGG 0.803604 5_2:+74460074 Msa0788120:CDS
TGTCCATGATGAAAACACGG+CGG 0.827708 5_2:-74459459 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTATTATTTTATCAATTTTA+GGG + chr5_2:74457675-74457694 Msa0788120:intron 10.0%
!! TTAAAATTCAATTTCAATTT+GGG - chr5_2:74458041-74458060 None:intergenic 10.0%
!! ATTAAAATTCAATTTCAATT+TGG - chr5_2:74458042-74458061 None:intergenic 10.0%
!!! AAATTGAATTTTAATTAGTT+CGG + chr5_2:74458047-74458066 Msa0788120:intron 10.0%
!!! TTGTCTTTATTTTTAAATTT+TGG + chr5_2:74460615-74460634 Msa0788120:three_prime_UTR 10.0%
!!! TTTTTTTCTTTTTGTTTCTT+AGG + chr5_2:74457584-74457603 Msa0788120:intron 15.0%
!!! TTTTTTCTTTTTGTTTCTTA+GGG + chr5_2:74457585-74457604 Msa0788120:intron 15.0%
!!! TGATTTTGATGAATTTTTTT+CGG + chr5_2:74457637-74457656 Msa0788120:intron 15.0%
!!! GGTATTATTTTATCAATTTT+AGG + chr5_2:74457674-74457693 Msa0788120:intron 15.0%
!! ACTTTCATTCATATAATTAA+AGG - chr5_2:74458154-74458173 None:intergenic 15.0%
!!! TAACTCTTTAATTTTTTGTA+TGG + chr5_2:74458206-74458225 Msa0788120:intron 15.0%
!!! ATTCAATTCTAAAACTAAAA+GGG - chr5_2:74458244-74458263 None:intergenic 15.0%
!!! AATTCAATTCTAAAACTAAA+AGG - chr5_2:74458245-74458264 None:intergenic 15.0%
!! ACTTTCTTTCAAAAAATTAA+AGG - chr5_2:74458277-74458296 None:intergenic 15.0%
!! TATAATTGTTACTAATACTT+TGG + chr5_2:74458341-74458360 Msa0788120:intron 15.0%
!! TGTTAATTGAATATGTTGTT+AGG + chr5_2:74457702-74457721 Msa0788120:intron 20.0%
!! GTTAATTGAATATGTTGTTA+GGG + chr5_2:74457703-74457722 Msa0788120:intron 20.0%
!! TCAACTATGAAACATATATT+CGG - chr5_2:74457992-74458011 None:intergenic 20.0%
!! AAAAATAGATCACATGATTA+GGG - chr5_2:74458089-74458108 None:intergenic 20.0%
!! AAAAAATAGATCACATGATT+AGG - chr5_2:74458090-74458109 None:intergenic 20.0%
!!! TTTTTTGAAAGAAAGTTGTT+TGG + chr5_2:74458281-74458300 Msa0788120:intron 20.0%
!!! TTTTTGAAAGAAAGTTGTTT+GGG + chr5_2:74458282-74458301 Msa0788120:intron 20.0%
!! TGTTGTTCTGATTATTATAT+TGG + chr5_2:74458428-74458447 Msa0788120:intron 20.0%
!! GTTGTTCTGATTATTATATT+GGG + chr5_2:74458429-74458448 Msa0788120:intron 20.0%
!!! TTTTATTAGATGCAATTTTC+TGG + chr5_2:74460650-74460669 Msa0788120:three_prime_UTR 20.0%
!!! CAATACTTTTTACAGTAACA+AGG + chr5_2:74457501-74457520 Msa0788120:CDS 25.0%
!! TTTTCGGTTATGATTCTTAT+TGG + chr5_2:74457653-74457672 Msa0788120:intron 25.0%
!!! GTTTTAGAATTGAATTTGCA+TGG + chr5_2:74458249-74458268 Msa0788120:intron 25.0%
!! GTTATTGTCAATGTTATTTG+AGG + chr5_2:74458318-74458337 Msa0788120:intron 25.0%
! TAATGATGATTTAGTTGTTG+TGG + chr5_2:74458398-74458417 Msa0788120:intron 25.0%
! AATGATGATTTAGTTGTTGT+GGG + chr5_2:74458399-74458418 Msa0788120:intron 25.0%
! GAAGAAAAAGAAGAAGATTA+AGG + chr5_2:74459186-74459205 Msa0788120:CDS 25.0%
! ATTTCTCTTGAAATGTTAAG+TGG - chr5_2:74459550-74459569 None:intergenic 25.0%
! AATGACATTTACTACATTAC+CGG + chr5_2:74459829-74459848 Msa0788120:CDS 25.0%
! TGAAGTAGTTTCTATTGTTT+AGG + chr5_2:74460555-74460574 Msa0788120:three_prime_UTR 25.0%
!!! TTCCTGAAATACACTTTTTT+AGG + chr5_2:74460798-74460817 Msa0788120:three_prime_UTR 25.0%
!!! TCCTGAAATACACTTTTTTA+GGG + chr5_2:74460799-74460818 Msa0788120:three_prime_UTR 25.0%
AAAAGAAAAAAAGAGCGAAG+AGG - chr5_2:74457576-74457595 None:intergenic 30.0%
! TGAATATGTTGTTAGGGTTT+TGG + chr5_2:74457709-74457728 Msa0788120:intron 30.0%
! GAATATGTTGTTAGGGTTTT+GGG + chr5_2:74457710-74457729 Msa0788120:intron 30.0%
! TACTGTGTAACATTTTCACT+TGG + chr5_2:74458114-74458133 Msa0788120:intron 30.0%
!! ATACTTTGGAATATCAGTGT+TGG + chr5_2:74458355-74458374 Msa0788120:intron 30.0%
!! GAATATCAGTGTTGGATTTT+TGG + chr5_2:74458363-74458382 Msa0788120:intron 30.0%
ATAATGTGAATGAACAACTC+TGG - chr5_2:74458526-74458545 None:intergenic 30.0%
!! ACTATCATTGATAGTGGAAT+TGG + chr5_2:74458571-74458590 Msa0788120:CDS 30.0%
CTGTATTTATGTTCCAGATT+TGG + chr5_2:74458700-74458719 Msa0788120:intron 30.0%
TAAAATAACTCTCATCCTCA+AGG + chr5_2:74458967-74458986 Msa0788120:CDS 30.0%
TTAGCTATCCAATTTCTCTT+TGG + chr5_2:74459056-74459075 Msa0788120:CDS 30.0%
TAGCTATCCAATTTCTCTTT+GGG + chr5_2:74459057-74459076 Msa0788120:CDS 30.0%
GAAAAAGAAGAAGATTAAGG+AGG + chr5_2:74459189-74459208 Msa0788120:CDS 30.0%
TTTGTGTCAAAGAGATCAAA+AGG - chr5_2:74459409-74459428 None:intergenic 30.0%
TCAACAGAACAAGATTCTTA+AGG + chr5_2:74459573-74459592 Msa0788120:CDS 30.0%
AGATTACAACAAGTTCTATG+AGG + chr5_2:74459660-74459679 Msa0788120:CDS 30.0%
TGAGGATGAAAAGAAAAAGA+TGG + chr5_2:74460026-74460045 Msa0788120:CDS 30.0%
GTAGTTTCTATTGTTTAGGA+AGG + chr5_2:74460559-74460578 Msa0788120:three_prime_UTR 30.0%
GTGTTAATTGTGACTATCTT+TGG + chr5_2:74460709-74460728 Msa0788120:three_prime_UTR 30.0%
ATTTCAGGAACGAAATAACA+AGG - chr5_2:74460788-74460807 None:intergenic 30.0%
! ACCCTAAAAAAGTGTATTTC+AGG - chr5_2:74460803-74460822 None:intergenic 30.0%
ATATTGGGATGCTGTAATGT+AGG + chr5_2:74458444-74458463 Msa0788120:intron 35.0%
! TTTGGATAAGATCCGTTTTG+AGG + chr5_2:74458468-74458487 Msa0788120:CDS 35.0%
! TTGGATAAGATCCGTTTTGA+GGG + chr5_2:74458469-74458488 Msa0788120:CDS 35.0%
!! AATGATAGTCAAGGTGTTGT+TGG - chr5_2:74458560-74458579 None:intergenic 35.0%
ACCTTGACTATCATTGATAG+TGG + chr5_2:74458565-74458584 Msa0788120:CDS 35.0%
TCCACTATCAATGATAGTCA+AGG - chr5_2:74458569-74458588 None:intergenic 35.0%
! CTTTTTCCTGAGTCTGTAAT+TGG + chr5_2:74458623-74458642 Msa0788120:intron 35.0%
CATAAACCAATTACAGACTC+AGG - chr5_2:74458632-74458651 None:intergenic 35.0%
! ATGATGATGAACAGTATGTG+TGG + chr5_2:74458876-74458895 Msa0788120:CDS 35.0%
! TGATGATGAACAGTATGTGT+GGG + chr5_2:74458877-74458896 Msa0788120:CDS 35.0%
TTCTCAACCCAAAGAGAAAT+TGG - chr5_2:74459067-74459086 None:intergenic 35.0%
! GAAAGAGATTTCTGATGATG+AGG + chr5_2:74459096-74459115 Msa0788120:CDS 35.0%
AGTAGATGAGGAGAAAGAAA+AGG + chr5_2:74459159-74459178 Msa0788120:CDS 35.0%
!! TTAAGGAGGTGTCTAATGAA+TGG + chr5_2:74459203-74459222 Msa0788120:CDS 35.0%
ACATACAGCTTGATGTTGTT+GGG - chr5_2:74459439-74459458 None:intergenic 35.0%
AGTTGTCCATGATGAAAACA+CGG - chr5_2:74459465-74459484 None:intergenic 35.0%
TTCACAAAGCTAAGATACTC+GGG - chr5_2:74459502-74459521 None:intergenic 35.0%
CTTCACAAAGCTAAGATACT+CGG - chr5_2:74459503-74459522 None:intergenic 35.0%
!! GAGTATCTTAGCTTTGTGAA+GGG + chr5_2:74459502-74459521 Msa0788120:CDS 35.0%
ACAAGATTCTTAAGGTCATC+AGG + chr5_2:74459581-74459600 Msa0788120:CDS 35.0%
!! CTTTGAAATTGCTGAGAACA+AGG + chr5_2:74459636-74459655 Msa0788120:CDS 35.0%
! TTCTCTAAGAACTTGAAGCT+GGG + chr5_2:74459685-74459704 Msa0788120:CDS 35.0%
!!! TCTTGTTTTGAGAATCCTCA+TGG - chr5_2:74459714-74459733 None:intergenic 35.0%
TTTCTAAGCTTCTCAAGGAA+GGG - chr5_2:74459883-74459902 None:intergenic 35.0%
CTTGAGAAGCTTAGAAAGAA+GGG + chr5_2:74459886-74459905 Msa0788120:CDS 35.0%
GGGATATGAAGTGATTTACA+TGG + chr5_2:74459906-74459925 Msa0788120:CDS 35.0%
ACCAACAGCATATTCATCAA+TGG - chr5_2:74459938-74459957 None:intergenic 35.0%
TAGTGTCTGCAACTAAAGAA+GGG + chr5_2:74459986-74460005 Msa0788120:CDS 35.0%
GAAAAAGATGGAAGAACAGA+AGG + chr5_2:74460038-74460057 Msa0788120:CDS 35.0%
CTCTGCGAAAAAAACCAGAT+CGG + chr5_2:74457414-74457433 Msa0788120:five_prime_UTR 40.0%
GAAAAAAACCAGATCGGCAA+TGG + chr5_2:74457420-74457439 Msa0788120:exon 40.0%
GAAGAGGAAGAAGCTTACAT+CGG - chr5_2:74457560-74457579 None:intergenic 40.0%
! AGAATCAAGCTTGCTCTTGT+CGG - chr5_2:74458500-74458519 None:intergenic 40.0%
TCATGCTAACTTACCAGCTT+TGG - chr5_2:74458602-74458621 None:intergenic 40.0%
TATGGCTTCCATGAATTCCT+TGG - chr5_2:74458759-74458778 None:intergenic 40.0%
GTTAGCATGATTGGACAGTT+TGG + chr5_2:74458794-74458813 Msa0788120:CDS 40.0%
!! ATGATTGGACAGTTTGGTGT+TGG + chr5_2:74458800-74458819 Msa0788120:CDS 40.0%
GGTGGTAACAATAACCTTCT+CGG - chr5_2:74458849-74458868 None:intergenic 40.0%
TTCATCATCATTGTGCTTGG+TGG - chr5_2:74458867-74458886 None:intergenic 40.0%
CTGTTCATCATCATTGTGCT+TGG - chr5_2:74458870-74458889 None:intergenic 40.0%
AATAACTCTCATCCTCAAGG+AGG + chr5_2:74458970-74458989 Msa0788120:CDS 40.0%
GGATCAACTTGAGTATCTTG+AGG + chr5_2:74458991-74459010 Msa0788120:CDS 40.0%
TCTTAACCAAGTCCTTCAGA+CGG - chr5_2:74459021-74459040 None:intergenic 40.0%
TAAGGTTGAGGAAGTAGATG+AGG + chr5_2:74459147-74459166 Msa0788120:CDS 40.0%
GGTGTCTAATGAATGGTCTT+TGG + chr5_2:74459210-74459229 Msa0788120:CDS 40.0%
TGAACAAGCAGAAGCCTATT+TGG + chr5_2:74459233-74459252 Msa0788120:CDS 40.0%
ACAAGAGTCTCACCAATGAT+TGG + chr5_2:74459302-74459321 Msa0788120:CDS 40.0%
CAAGAGTCTCACCAATGATT+GGG + chr5_2:74459303-74459322 Msa0788120:CDS 40.0%
CAAATGCTCTTCCCAATCAT+TGG - chr5_2:74459317-74459336 None:intergenic 40.0%
!! CAATGATTGGGAAGAGCATT+TGG + chr5_2:74459315-74459334 Msa0788120:CDS 40.0%
TGTTAAGCACTTCTCTGTTG+AGG + chr5_2:74459339-74459358 Msa0788120:CDS 40.0%
GTTAAGCACTTCTCTGTTGA+GGG + chr5_2:74459340-74459359 Msa0788120:CDS 40.0%
!! AGATCAAAAGGTGCTCTCTT+CGG - chr5_2:74459397-74459416 None:intergenic 40.0%
GACATACAGCTTGATGTTGT+TGG - chr5_2:74459440-74459459 None:intergenic 40.0%
TTTCATCATGGACAACTGTG+AGG + chr5_2:74459468-74459487 Msa0788120:CDS 40.0%
!! CGAGTATCTTAGCTTTGTGA+AGG + chr5_2:74459501-74459520 Msa0788120:CDS 40.0%
!! TAGCTTTGTGAAGGGTATTG+TGG + chr5_2:74459510-74459529 Msa0788120:CDS 40.0%
TAAGGTCATCAGGAAGAACT+TGG + chr5_2:74459591-74459610 Msa0788120:CDS 40.0%
! CAGCTTCAAGTTCTTAGAGA+AGG - chr5_2:74459686-74459705 None:intergenic 40.0%
! CTTCTCTAAGAACTTGAAGC+TGG + chr5_2:74459684-74459703 Msa0788120:CDS 40.0%
TATGTTACCAGGATGAAGGA+AGG + chr5_2:74459802-74459821 Msa0788120:CDS 40.0%
AACAGCTTTCTTGCTTTCAC+CGG - chr5_2:74459851-74459870 None:intergenic 40.0%
TTCTAAGCTTCTCAAGGAAG+GGG - chr5_2:74459882-74459901 None:intergenic 40.0%
CTTTCTAAGCTTCTCAAGGA+AGG - chr5_2:74459884-74459903 None:intergenic 40.0%
CCTTCTTTCTAAGCTTCTCA+AGG - chr5_2:74459888-74459907 None:intergenic 40.0%
CCTTGAGAAGCTTAGAAAGA+AGG + chr5_2:74459885-74459904 Msa0788120:CDS 40.0%
GCCATTGATGAATATGCTGT+TGG + chr5_2:74459934-74459953 Msa0788120:CDS 40.0%
CTAGTGTCTGCAACTAAAGA+AGG + chr5_2:74459985-74460004 Msa0788120:CDS 40.0%
GAAGTTCGACAATCTTTGCA+AGG + chr5_2:74460062-74460081 Msa0788120:CDS 40.0%
CAATCTTTGCAAGGTGATCA+AGG + chr5_2:74460071-74460090 Msa0788120:CDS 40.0%
TGTTTAGTGACTGGTGAGTA+TGG + chr5_2:74460156-74460175 Msa0788120:CDS 40.0%
CATGTCAAGCAAGAAGACAA+TGG + chr5_2:74460245-74460264 Msa0788120:CDS 40.0%
CAGGAATGACAAATCTGTCA+AGG + chr5_2:74460323-74460342 Msa0788120:CDS 40.0%
TCTCAAACAGCAAGAGAACA+AGG - chr5_2:74460350-74460369 None:intergenic 40.0%
!! ATCCTGTTGCCAAAAGTGTT+GGG - chr5_2:74460408-74460427 None:intergenic 40.0%
! AATCCTGTTGCCAAAAGTGT+TGG - chr5_2:74460409-74460428 None:intergenic 40.0%
! CTATTGTTTAGGAAGGTGTG+AGG + chr5_2:74460566-74460585 Msa0788120:three_prime_UTR 40.0%
TGAGCAAACAATAGCTACAC+TGG - chr5_2:74460677-74460696 None:intergenic 40.0%
TGTTTGCTCATCGTAAGTTC+TGG + chr5_2:74460687-74460706 Msa0788120:three_prime_UTR 40.0%
AAAAACCAGATCGGCAATGG+CGG + chr5_2:74457423-74457442 Msa0788120:exon 45.0%
ACAAGAGACGTTTGCTTTCC+AGG + chr5_2:74457447-74457466 Msa0788120:CDS 45.0%
! GAAGTTGATTGATCTCAGCC+TGG - chr5_2:74457468-74457487 None:intergenic 45.0%
GGATGCTGTAATGTAGGCTT+TGG + chr5_2:74458450-74458469 Msa0788120:intron 45.0%
!! AAGGTGTTGTTGGTCTTGTC+AGG - chr5_2:74458550-74458569 None:intergenic 45.0%
GGAATTGGAATGACCAAAGC+TGG + chr5_2:74458586-74458605 Msa0788120:CDS 45.0%
CCTAGGTTGTTCACCAAATC+TGG - chr5_2:74458716-74458735 None:intergenic 45.0%
!! CCAGATTTGGTGAACAACCT+AGG + chr5_2:74458713-74458732 Msa0788120:intron 45.0%
ACAACCTAGGTACCATTGCT+AGG + chr5_2:74458726-74458745 Msa0788120:CDS 45.0%
GTCTGGTACCAAGGAATTCA+TGG + chr5_2:74458748-74458767 Msa0788120:CDS 45.0%
!! GGTGCTGATGTTAGCATGAT+TGG + chr5_2:74458785-74458804 Msa0788120:CDS 45.0%
CAATAACCTTCTCGGCAACA+AGG - chr5_2:74458841-74458860 None:intergenic 45.0%
GATACAACTGGTGAAGCTCT+TGG + chr5_2:74458935-74458954 Msa0788120:CDS 45.0%
!! ACTCAAGTTGATCCTCCTTG+AGG - chr5_2:74458985-74459004 None:intergenic 45.0%
! GATTTCTGATGATGAGGACG+AGG + chr5_2:74459102-74459121 Msa0788120:CDS 45.0%
GAAGAGAAGAAGGAAGAGGA+GGG + chr5_2:74459124-74459143 Msa0788120:CDS 45.0%
AGCAGAAGCCTATTTGGATG+AGG + chr5_2:74459239-74459258 Msa0788120:CDS 45.0%
TCAGGCTTCCTCATCCAAAT+AGG - chr5_2:74459250-74459269 None:intergenic 45.0%
TATTTGGATGAGGAAGCCTG+AGG + chr5_2:74459249-74459268 Msa0788120:CDS 45.0%
TGAGGGACAGTTGGAGTTTA+AGG + chr5_2:74459357-74459376 Msa0788120:CDS 45.0%
TGTCCATGATGAAAACACGG+CGG - chr5_2:74459462-74459481 None:intergenic 45.0%
!! CAAAGCTTGCTGATTTGCTC+AGG + chr5_2:74459734-74459753 Msa0788120:CDS 45.0%
TCCTGGTAACATAGTCCTTG+AGG - chr5_2:74459795-74459814 None:intergenic 45.0%
GGACTATGTTACCAGGATGA+AGG + chr5_2:74459798-74459817 Msa0788120:CDS 45.0%
ATTCTGTCCTTCCTTCATCC+TGG - chr5_2:74459812-74459831 None:intergenic 45.0%
TCTAAGCTTCTCAAGGAAGG+GGG - chr5_2:74459881-74459900 None:intergenic 45.0%
ATATGCTGTTGGTCAGCTCA+AGG + chr5_2:74459945-74459964 Msa0788120:CDS 45.0%
TGGTCAGCTCAAGGAATTTG+AGG + chr5_2:74459954-74459973 Msa0788120:CDS 45.0%
GGTCAGCTCAAGGAATTTGA+GGG + chr5_2:74459955-74459974 Msa0788120:CDS 45.0%
GTTGAAACTTGACGAGAGTG+AGG + chr5_2:74460008-74460027 Msa0788120:CDS 45.0%
TCTTTGCAAGGTGATCAAGG+AGG + chr5_2:74460074-74460093 Msa0788120:CDS 45.0%
!! AAGGTGATCAAGGAGGTGTT+GGG + chr5_2:74460081-74460100 Msa0788120:CDS 45.0%
AGCAAGGAGAATCGACAACA+CGG - chr5_2:74460137-74460156 None:intergenic 45.0%
!! TCTCCTTGCTGTTTAGTGAC+TGG + chr5_2:74460147-74460166 Msa0788120:CDS 45.0%
TCACCAGTCACTAAACAGCA+AGG - chr5_2:74460153-74460172 None:intergenic 45.0%
TAGTGACTGGTGAGTATGGT+TGG + chr5_2:74460160-74460179 Msa0788120:CDS 45.0%
CTTCATGATCCTCTCCATGT+TGG - chr5_2:74460190-74460209 None:intergenic 45.0%
CAACATGGAGAGGATCATGA+AGG + chr5_2:74460188-74460207 Msa0788120:CDS 45.0%
TTCCTCAGCTCCTCCATTAT+GGG - chr5_2:74460288-74460307 None:intergenic 45.0%
TTTCCTCAGCTCCTCCATTA+TGG - chr5_2:74460289-74460308 None:intergenic 45.0%
GAGACTGCTCTTCTTACTTC+TGG + chr5_2:74460366-74460385 Msa0788120:CDS 45.0%
!! CAAAAGTGTTGGGCTCATCA+AGG - chr5_2:74460398-74460417 None:intergenic 45.0%
! CTTGATGAGCCCAACACTTT+TGG + chr5_2:74460396-74460415 Msa0788120:CDS 45.0%
! CTTTTGGCAACAGGATTCAC+AGG + chr5_2:74460412-74460431 Msa0788120:CDS 45.0%
ATTCACAGGATGCTCAAGCT+TGG + chr5_2:74460426-74460445 Msa0788120:CDS 45.0%
!! GCTTGGTCTTAGCATTGATG+AGG + chr5_2:74460443-74460462 Msa0788120:CDS 45.0%
TGTCGGTCAAGCCCTCAAAA+CGG - chr5_2:74458483-74458502 None:intergenic 50.0%
CAGACCTAGCAATGGTACCT+AGG - chr5_2:74458733-74458752 None:intergenic 50.0%
CTAGGTACCATTGCTAGGTC+TGG + chr5_2:74458731-74458750 Msa0788120:CDS 50.0%
CTTGGTACCAGACCTAGCAA+TGG - chr5_2:74458741-74458760 None:intergenic 50.0%
CATTGCTAGGTCTGGTACCA+AGG + chr5_2:74458739-74458758 Msa0788120:CDS 50.0%
TTCATGGAAGCCATAGCTGC+TGG + chr5_2:74458764-74458783 Msa0788120:CDS 50.0%
AACATCAGCACCAGCAGCTA+TGG - chr5_2:74458777-74458796 None:intergenic 50.0%
TGCTTACCTTGTTGCCGAGA+AGG + chr5_2:74458832-74458851 Msa0788120:CDS 50.0%
AGTGAATGACCCACCAGCTT+GGG - chr5_2:74458906-74458925 None:intergenic 50.0%
TGGGTCATTCACTGTGACCA+GGG + chr5_2:74458913-74458932 Msa0788120:CDS 50.0%
ACTGTGACCAGGGATACAAC+TGG + chr5_2:74458923-74458942 Msa0788120:CDS 50.0%
AGCTTCACCAGTTGTATCCC+TGG - chr5_2:74458933-74458952 None:intergenic 50.0%
AACTGGTGAAGCTCTTGGCA+GGG + chr5_2:74458940-74458959 Msa0788120:CDS 50.0%
TGAGGACGAGGAAGAGAAGA+AGG + chr5_2:74459114-74459133 Msa0788120:CDS 50.0%
CGAGGAAGAGAAGAAGGAAG+AGG + chr5_2:74459120-74459139 Msa0788120:CDS 50.0%
GGAAGAGAAGAAGGAAGAGG+AGG + chr5_2:74459123-74459142 Msa0788120:CDS 50.0%
GAAGAAGGAAGAGGAGGGTA+AGG + chr5_2:74459129-74459148 Msa0788120:CDS 50.0%
GAAGCCTGAGGAGATCACAA+AGG + chr5_2:74459261-74459280 Msa0788120:CDS 50.0%
TCGTCCTTTGTGATCTCCTC+AGG - chr5_2:74459268-74459287 None:intergenic 50.0%
CTTCTCTGTTGAGGGACAGT+TGG + chr5_2:74459348-74459367 Msa0788120:CDS 50.0%
! TGTCCGCCGTGTTTTCATCA+TGG + chr5_2:74459456-74459475 Msa0788120:CDS 50.0%
!! GAAGGGTATTGTGGACTCTG+AGG + chr5_2:74459519-74459538 Msa0788120:CDS 50.0%
CTTGAAGCTGGGTATCCATG+AGG + chr5_2:74459696-74459715 Msa0788120:CDS 50.0%
CATGTCATCACCACTCTTGG+TGG - chr5_2:74459767-74459786 None:intergenic 50.0%
GGTCATGTCATCACCACTCT+TGG - chr5_2:74459770-74459789 None:intergenic 50.0%
TGATGACATGACCAGCCTCA+AGG + chr5_2:74459777-74459796 Msa0788120:CDS 50.0%
GGTAACATAGTCCTTGAGGC+TGG - chr5_2:74459791-74459810 None:intergenic 50.0%
GCCTCAAGGACTATGTTACC+AGG + chr5_2:74459791-74459810 Msa0788120:CDS 50.0%
! CAAGGTGATCAAGGAGGTGT+TGG + chr5_2:74460080-74460099 Msa0788120:CDS 50.0%
GGGTGACAAGGTTGAGAAAG+TGG + chr5_2:74460101-74460120 Msa0788120:CDS 50.0%
GTATGGTTGGACTGCCAACA+TGG + chr5_2:74460173-74460192 Msa0788120:CDS 50.0%
! TCATGAAGGCACAGGCTTTG+AGG + chr5_2:74460202-74460221 Msa0788120:CDS 50.0%
! CATGAAGGCACAGGCTTTGA+GGG + chr5_2:74460203-74460222 Msa0788120:CDS 50.0%
CAACCCTGAGAACCCCATAA+TGG + chr5_2:74460272-74460291 Msa0788120:CDS 50.0%
CCTCCATTATGGGGTTCTCA+GGG - chr5_2:74460278-74460297 None:intergenic 50.0%
TCCTCCATTATGGGGTTCTC+AGG - chr5_2:74460279-74460298 None:intergenic 50.0%
TCCTCAGCTCCTCCATTATG+GGG - chr5_2:74460287-74460306 None:intergenic 50.0%
! AGCCCAACACTTTTGGCAAC+AGG + chr5_2:74460403-74460422 Msa0788120:CDS 50.0%
TGATGCTGACATGCCACCAT+TGG + chr5_2:74460479-74460498 Msa0788120:CDS 50.0%
TCAGCATCAGCTTCCTCCAA+TGG - chr5_2:74460498-74460517 None:intergenic 50.0%
GAAGCTGATGCTGATGCAGA+GGG + chr5_2:74460504-74460523 Msa0788120:CDS 50.0%
TGATGCAGAGGGAAGCAAGA+TGG + chr5_2:74460515-74460534 Msa0788120:CDS 50.0%
AGAGGGAAGCAAGATGGAAG+AGG + chr5_2:74460521-74460540 Msa0788120:CDS 50.0%
TTGTTCCGCCATTGCCGATC+TGG - chr5_2:74457431-74457450 None:intergenic 55.0%
TATGTGTGGGAGTCCCAAGC+TGG + chr5_2:74458890-74458909 Msa0788120:CDS 55.0%
CAGTGAATGACCCACCAGCT+TGG - chr5_2:74458907-74458926 None:intergenic 55.0%
GTGGGTCATTCACTGTGACC+AGG + chr5_2:74458912-74458931 Msa0788120:CDS 55.0%
CAACTGGTGAAGCTCTTGGC+AGG + chr5_2:74458939-74458958 Msa0788120:CDS 55.0%
ACTGGTGAAGCTCTTGGCAG+GGG + chr5_2:74458941-74458960 Msa0788120:CDS 55.0%
TCTTGAGGAACGCCGTCTGA+AGG + chr5_2:74459006-74459025 Msa0788120:CDS 55.0%
GGAAGAGGAGGGTAAGGTTG+AGG + chr5_2:74459135-74459154 Msa0788120:CDS 55.0%
AGGTACCACTCCACCAAGAG+TGG + chr5_2:74459754-74459773 Msa0788120:CDS 55.0%
CATCACCACTCTTGGTGGAG+TGG - chr5_2:74459762-74459781 None:intergenic 55.0%
!! CAAGGAGGTGTTGGGTGACA+AGG + chr5_2:74460089-74460108 Msa0788120:CDS 55.0%
GTTGGACTGCCAACATGGAG+AGG + chr5_2:74460178-74460197 Msa0788120:CDS 55.0%
! GGAGAGGATCATGAAGGCAC+AGG + chr5_2:74460194-74460213 Msa0788120:CDS 55.0%
!! GGCTTTGAGGGATAGCAGCA+TGG + chr5_2:74460215-74460234 Msa0788120:CDS 55.0%
TTGAGGGATAGCAGCATGGC+TGG + chr5_2:74460219-74460238 Msa0788120:CDS 55.0%
CCCTGAGAACCCCATAATGG+AGG + chr5_2:74460275-74460294 Msa0788120:CDS 55.0%
! ACCCCATAATGGAGGAGCTG+AGG + chr5_2:74460283-74460302 Msa0788120:CDS 55.0%
! GCTGAGGAAACGTGCTGATG+CGG + chr5_2:74460299-74460318 Msa0788120:CDS 55.0%
TGCTGACATGCCACCATTGG+AGG + chr5_2:74460482-74460501 Msa0788120:CDS 55.0%
GCATCAGCTTCCTCCAATGG+TGG - chr5_2:74460495-74460514 None:intergenic 55.0%
GGAAGCTGATGCTGATGCAG+AGG + chr5_2:74460503-74460522 Msa0788120:CDS 55.0%
! GGTGCTACGAGCAAAGAACG+CGG - chr5_2:74460767-74460786 None:intergenic 55.0%
TGTGGGAGTCCCAAGCTGGT+GGG + chr5_2:74458894-74458913 Msa0788120:CDS 60.0%
GGAACGCCGTCTGAAGGACT+TGG + chr5_2:74459012-74459031 Msa0788120:CDS 60.0%
! GGAAACGTGCTGATGCGGAC+AGG + chr5_2:74460304-74460323 Msa0788120:CDS 60.0%
GTGTGGGAGTCCCAAGCTGG+TGG + chr5_2:74458893-74458912 Msa0788120:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 74457353 74460856 74457353 ID=Msa0788120;Name=Msa0788120
chr5_2 mRNA 74457353 74460856 74457353 ID=Msa0788120-mRNA-1;Parent=Msa0788120;Name=Msa0788120-mRNA-1;_AED=0.00;_eAED=0.00;_QI=86|1|1|1|1|1|3|305|699
chr5_2 exon 74457353 74457561 74457353 ID=Msa0788120-mRNA-1:exon:22711;Parent=Msa0788120-mRNA-1
chr5_2 exon 74458466 74458607 74458466 ID=Msa0788120-mRNA-1:exon:22712;Parent=Msa0788120-mRNA-1
chr5_2 exon 74458717 74460856 74458717 ID=Msa0788120-mRNA-1:exon:22713;Parent=Msa0788120-mRNA-1
chr5_2 five_prime_UTR 74457353 74457438 74457353 ID=Msa0788120-mRNA-1:five_prime_utr;Parent=Msa0788120-mRNA-1
chr5_2 CDS 74457439 74457561 74457439 ID=Msa0788120-mRNA-1:cds;Parent=Msa0788120-mRNA-1
chr5_2 CDS 74458466 74458607 74458466 ID=Msa0788120-mRNA-1:cds;Parent=Msa0788120-mRNA-1
chr5_2 CDS 74458717 74460551 74458717 ID=Msa0788120-mRNA-1:cds;Parent=Msa0788120-mRNA-1
chr5_2 three_prime_UTR 74460552 74460856 74460552 ID=Msa0788120-mRNA-1:three_prime_utr;Parent=Msa0788120-mRNA-1
Gene Sequence

>Msa0788120

ATGGCGGAACAAGAGACGTTTGCTTTCCAGGCTGAGATCAATCAACTTCTCAGTCTCATCATCAATACTTTTTACAGTAACAAGGAGATTTTTCTTCGTGAACTCATCAGTAACGCTTCCGATGCTTTGGATAAGATCCGTTTTGAGGGCTTGACCGACAAGAGCAAGCTTGATTCTCAGCCAGAGTTGTTCATTCACATTATTCCTGACAAGACCAACAACACCTTGACTATCATTGATAGTGGAATTGGAATGACCAAAGCTGATTTGGTGAACAACCTAGGTACCATTGCTAGGTCTGGTACCAAGGAATTCATGGAAGCCATAGCTGCTGGTGCTGATGTTAGCATGATTGGACAGTTTGGTGTTGGTTTCTACTCTGCTTACCTTGTTGCCGAGAAGGTTATTGTTACCACCAAGCACAATGATGATGAACAGTATGTGTGGGAGTCCCAAGCTGGTGGGTCATTCACTGTGACCAGGGATACAACTGGTGAAGCTCTTGGCAGGGGAACTAAAATAACTCTCATCCTCAAGGAGGATCAACTTGAGTATCTTGAGGAACGCCGTCTGAAGGACTTGGTTAAGAAGCATTCTGAATTTATTAGCTATCCAATTTCTCTTTGGGTTGAGAAGACTATTGAGAAAGAGATTTCTGATGATGAGGACGAGGAAGAGAAGAAGGAAGAGGAGGGTAAGGTTGAGGAAGTAGATGAGGAGAAAGAAAAGGAAGAGAAGAAAAAGAAGAAGATTAAGGAGGTGTCTAATGAATGGTCTTTGGTGAACAAGCAGAAGCCTATTTGGATGAGGAAGCCTGAGGAGATCACAAAGGACGAGTATGCTGCTTTTTACAAGAGTCTCACCAATGATTGGGAAGAGCATTTGGCTGTTAAGCACTTCTCTGTTGAGGGACAGTTGGAGTTTAAGGCTGTTCTCTTTGTACCGAAGAGAGCACCTTTTGATCTCTTTGACACAAAGAAGAAGCCCAACAACATCAAGCTGTATGTCCGCCGTGTTTTCATCATGGACAACTGTGAGGAGCTGATGCCCGAGTATCTTAGCTTTGTGAAGGGTATTGTGGACTCTGAGGATCTTCCACTTAACATTTCAAGAGAAATGCTTCAACAGAACAAGATTCTTAAGGTCATCAGGAAGAACTTGGTGAAGAAGTGTCTTGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAAGATTACAACAAGTTCTATGAGGCCTTCTCTAAGAACTTGAAGCTGGGTATCCATGAGGATTCTCAAAACAAGACAAAGCTTGCTGATTTGCTCAGGTACCACTCCACCAAGAGTGGTGATGACATGACCAGCCTCAAGGACTATGTTACCAGGATGAAGGAAGGACAGAATGACATTTACTACATTACCGGTGAAAGCAAGAAAGCTGTTGAGAATTCCCCCTTCCTTGAGAAGCTTAGAAAGAAGGGATATGAAGTGATTTACATGGTTGACGCCATTGATGAATATGCTGTTGGTCAGCTCAAGGAATTTGAGGGTAAGAAGCTAGTGTCTGCAACTAAAGAAGGGTTGAAACTTGACGAGAGTGAGGATGAAAAGAAAAAGATGGAAGAACAGAAGGAGAAGTTCGACAATCTTTGCAAGGTGATCAAGGAGGTGTTGGGTGACAAGGTTGAGAAAGTGGTTGTATCTGACCGTGTTGTCGATTCTCCTTGCTGTTTAGTGACTGGTGAGTATGGTTGGACTGCCAACATGGAGAGGATCATGAAGGCACAGGCTTTGAGGGATAGCAGCATGGCTGGTTACATGTCAAGCAAGAAGACAATGGAAATCAACCCTGAGAACCCCATAATGGAGGAGCTGAGGAAACGTGCTGATGCGGACAGGAATGACAAATCTGTCAAGGACCTTGTTCTCTTGCTGTTTGAGACTGCTCTTCTTACTTCTGGATTCAGCCTTGATGAGCCCAACACTTTTGGCAACAGGATTCACAGGATGCTCAAGCTTGGTCTTAGCATTGATGAGGATGCAGCAGAAGCTGATGCTGACATGCCACCATTGGAGGAAGCTGATGCTGATGCAGAGGGAAGCAAGATGGAAGAGGTCGATTAA
Protein sequence

>Msa0788120

MAEQETFAFQAEINQLLSLIINTFYSNKEIFLRELISNASDALDKIRFEGLTDKSKLDSQPELFIHIIPDKTNNTLTIIDSGIGMTKADLVNNLGTIARSGTKEFMEAIAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDTTGEALGRGTKITLILKEDQLEYLEERRLKDLVKKHSEFISYPISLWVEKTIEKEISDDEDEEEKKEEEGKVEEVDEEKEKEEKKKKKIKEVSNEWSLVNKQKPIWMRKPEEITKDEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTKKKPNNIKLYVRRVFIMDNCEELMPEYLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCLELFFEIAENKEDYNKFYEAFSKNLKLGIHEDSQNKTKLADLLRYHSTKSGDDMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLRKKGYEVIYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESEDEKKKMEEQKEKFDNLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADRNDKSVKDLVLLLFETALLTSGFSLDEPNTFGNRIHRMLKLGLSIDEDAAEADADMPPLEEADADAEGSKMEEVD*