Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820250 | XP_024640922.1 | 95.788 | 641 | 24 | 2 | 1 | 641 | 1 | 638 | 0.0 | 1262 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820250 | sp|Q04832|HEXP_LEIMA | 29.614 | 233 | 109 | 7 | 286 | 494 | 18 | 219 | 8.14e-16 | 81.6 |
| Msa0820250 | sp|Q04832|HEXP_LEIMA | 30.672 | 238 | 122 | 10 | 285 | 489 | 44 | 271 | 2.51e-15 | 80.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820250 | A0A396HXU5 | 95.788 | 641 | 24 | 2 | 1 | 641 | 1 | 638 | 0.0 | 1262 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005270 | Msa0820250 | 0.801707 | 7.931243e-49 | -8.615850e-47 |
| Msa0010770 | Msa0820250 | 0.813006 | 3.184953e-51 | -8.615850e-47 |
| Msa0030300 | Msa0820250 | 0.823365 | 1.440930e-53 | -8.615850e-47 |
| Msa0038000 | Msa0820250 | 0.805431 | 1.339703e-49 | -8.615850e-47 |
| Msa0038440 | Msa0820250 | 0.806131 | 9.547849e-50 | -8.615850e-47 |
| Msa0039220 | Msa0820250 | 0.806288 | 8.845506e-50 | -8.615850e-47 |
| Msa0041960 | Msa0820250 | 0.806738 | 7.108229e-50 | -8.615850e-47 |
| Msa0045490 | Msa0820250 | 0.825959 | 3.526674e-54 | -8.615850e-47 |
| Msa0054820 | Msa0820250 | 0.806646 | 7.435517e-50 | -8.615850e-47 |
| Msa0077900 | Msa0820250 | 0.806227 | 9.112104e-50 | -8.615850e-47 |
| Msa0086840 | Msa0820250 | 0.821634 | 3.637503e-53 | -8.615850e-47 |
| Msa0090030 | Msa0820250 | 0.811260 | 7.652617e-51 | -8.615850e-47 |
| Msa0096580 | Msa0820250 | 0.814262 | 1.684575e-51 | -8.615850e-47 |
| Msa0097950 | Msa0820250 | 0.833238 | 5.981355e-56 | -8.615850e-47 |
| Msa0100160 | Msa0820250 | 0.809800 | 1.582235e-50 | -8.615850e-47 |
| Msa0108870 | Msa0820250 | 0.801534 | 8.603560e-49 | -8.615850e-47 |
| Msa0610500 | Msa0820250 | 0.802116 | 6.536304e-49 | -8.615850e-47 |
| Msa0618950 | Msa0820250 | 0.813276 | 2.778608e-51 | -8.615850e-47 |
| Msa0620330 | Msa0820250 | 0.806877 | 6.644825e-50 | -8.615850e-47 |
| Msa0628290 | Msa0820250 | 0.821415 | 4.086796e-53 | -8.615850e-47 |
| Msa0647930 | Msa0820250 | 0.802765 | 4.803425e-49 | -8.615850e-47 |
| Msa0651150 | Msa0820250 | 0.801987 | 6.948219e-49 | -8.615850e-47 |
| Msa0658480 | Msa0820250 | 0.812615 | 3.877160e-51 | -8.615850e-47 |
| Msa0673270 | Msa0820250 | 0.804991 | 1.655769e-49 | -8.615850e-47 |
| Msa0675990 | Msa0820250 | 0.810594 | 1.066482e-50 | -8.615850e-47 |
| Msa0709160 | Msa0820250 | 0.807285 | 5.447488e-50 | -8.615850e-47 |
| Msa0726080 | Msa0820250 | 0.810218 | 1.285549e-50 | -8.615850e-47 |
| Msa0744090 | Msa0820250 | 0.805521 | 1.282310e-49 | -8.615850e-47 |
| Msa0744100 | Msa0820250 | 0.833879 | 4.137873e-56 | -8.615850e-47 |
| Msa0756930 | Msa0820250 | 0.815035 | 1.136431e-51 | -8.615850e-47 |
| Msa0788120 | Msa0820250 | 0.824470 | 7.931199e-54 | -8.615850e-47 |
| Msa0796440 | Msa0820250 | 0.827813 | 1.271523e-54 | -8.615850e-47 |
| Msa0820250 | Msa0823500 | 0.825252 | 5.187806e-54 | -8.615850e-47 |
| Msa0820250 | Msa0825270 | 0.830212 | 3.334479e-55 | -8.615850e-47 |
| Msa0820250 | Msa0825280 | 0.806963 | 6.371467e-50 | -8.615850e-47 |
| Msa0820250 | Msa0836500 | 0.817541 | 3.126277e-52 | -8.615850e-47 |
| Msa0820250 | Msa0846230 | 0.809055 | 2.285675e-50 | -8.615850e-47 |
| Msa0820250 | Msa0851470 | 0.809359 | 1.967699e-50 | -8.615850e-47 |
| Msa0820250 | Msa0859180 | 0.802524 | 5.385855e-49 | -8.615850e-47 |
| Msa0820250 | Msa0861830 | 0.805624 | 1.220271e-49 | -8.615850e-47 |
| Msa0820250 | Msa0862500 | 0.829652 | 4.566976e-55 | -8.615850e-47 |
| Msa0820250 | Msa0864420 | 0.819640 | 1.044270e-52 | -8.615850e-47 |
| Msa0820250 | Msa0869100 | 0.805722 | 1.163677e-49 | -8.615850e-47 |
| Msa0820250 | Msa0881580 | 0.812031 | 5.201793e-51 | -8.615850e-47 |
| Msa0820250 | Msa0888940 | 0.806771 | 6.998040e-50 | -8.615850e-47 |
| Msa0820250 | Msa0899350 | 0.815323 | 9.806620e-52 | -8.615850e-47 |
| Msa0820250 | Msa0919470 | 0.816593 | 5.105301e-52 | -8.615850e-47 |
| Msa0820250 | Msa0944660 | 0.801919 | 7.175436e-49 | -8.615850e-47 |
| Msa0820250 | Msa0945840 | 0.803777 | 2.965258e-49 | -8.615850e-47 |
| Msa0820250 | Msa0959910 | 0.810320 | 1.222040e-50 | -8.615850e-47 |
| Msa0820250 | Msa0965020 | 0.817904 | 2.588869e-52 | -8.615850e-47 |
| Msa0820250 | Msa0980940 | 0.806197 | 9.246650e-50 | -8.615850e-47 |
| Msa0820250 | Msa0981310 | 0.815382 | 9.515983e-52 | -8.615850e-47 |
| Msa0820250 | Msa0981430 | 0.836793 | 7.598740e-57 | -8.615850e-47 |
| Msa0820250 | Msa1010460 | 0.813541 | 2.428984e-51 | -8.615850e-47 |
| Msa0820250 | Msa1028290 | 0.800042 | 1.735073e-48 | -8.615850e-47 |
| Msa0820250 | Msa1031770 | 0.841671 | 4.124177e-58 | -8.615850e-47 |
| Msa0820250 | Msa1039760 | 0.808179 | 3.517558e-50 | -8.615850e-47 |
| Msa0820250 | Msa1053200 | 0.822372 | 2.454046e-53 | -8.615850e-47 |
| Msa0820250 | Msa1070840 | 0.818375 | 2.026051e-52 | -8.615850e-47 |
| Msa0820250 | Msa1093330 | 0.807656 | 4.543736e-50 | -8.615850e-47 |
| Msa0820250 | Msa1112390 | 0.835511 | 1.608386e-56 | -8.615850e-47 |
| Msa0820250 | Msa1128330 | 0.835336 | 1.780892e-56 | -8.615850e-47 |
| Msa0820250 | Msa1130530 | 0.840187 | 1.011177e-57 | -8.615850e-47 |
| Msa0820250 | Msa1133400 | 0.801561 | 8.496814e-49 | -8.615850e-47 |
| Msa0820250 | Msa1158660 | 0.803697 | 3.080588e-49 | -8.615850e-47 |
| Msa0820250 | Msa1163870 | 0.807434 | 5.063683e-50 | -8.615850e-47 |
| Msa0820250 | Msa1174850 | 0.830482 | 2.864208e-55 | -8.615850e-47 |
| Msa0820250 | Msa1202150 | 0.806514 | 7.926466e-50 | -8.615850e-47 |
| Msa0820250 | Msa1214880 | 0.826098 | 3.269184e-54 | -8.615850e-47 |
| Msa0820250 | Msa1254710 | 0.801696 | 7.972790e-49 | -8.615850e-47 |
| Msa0820250 | Msa1280620 | 0.808056 | 3.736315e-50 | -8.615850e-47 |
| Msa0820250 | Msa1300860 | 0.816897 | 4.362933e-52 | -8.615850e-47 |
| Msa0820250 | Msa1320820 | 0.822832 | 1.918335e-53 | -8.615850e-47 |
| Msa0820250 | Msa1331920 | 0.839796 | 1.278746e-57 | -8.615850e-47 |
| Msa0820250 | Msa1341490 | 0.821397 | 4.127223e-53 | -8.615850e-47 |
| Msa0820250 | Msa1351550 | 0.800243 | 1.578832e-48 | -8.615850e-47 |
| Msa0820250 | Msa1357080 | 0.801778 | 7.668704e-49 | -8.615850e-47 |
| Msa0820250 | Msa1359560 | 0.809572 | 1.771205e-50 | -8.615850e-47 |
| Msa0820250 | Msa1371240 | 0.817842 | 2.673804e-52 | -8.615850e-47 |
| Msa0820250 | Msa1371640 | 0.813957 | 1.967417e-51 | -8.615850e-47 |
| Msa0820250 | Msa1376200 | 0.826951 | 2.046864e-54 | -8.615850e-47 |
| Msa0820250 | Msa1426570 | 0.833868 | 4.164977e-56 | -8.615850e-47 |
| Msa0820250 | Msa1435770 | 0.811512 | 6.747128e-51 | -8.615850e-47 |
| Msa0820250 | Msa1452480 | 0.829123 | 6.139016e-55 | -8.615850e-47 |
| Msa0820250 | Msa1463600 | 0.800449 | 1.433786e-48 | -8.615850e-47 |
| Msa0127850 | Msa0820250 | 0.812677 | 3.758040e-51 | -8.615850e-47 |
| Msa0128650 | Msa0820250 | 0.811021 | 8.620928e-51 | -8.615850e-47 |
| Msa0133630 | Msa0820250 | 0.802806 | 4.710857e-49 | -8.615850e-47 |
| Msa0136380 | Msa0820250 | 0.812803 | 3.528022e-51 | -8.615850e-47 |
| Msa0138210 | Msa0820250 | 0.801737 | 7.820187e-49 | -8.615850e-47 |
| Msa0140300 | Msa0820250 | 0.805992 | 1.021383e-49 | -8.615850e-47 |
| Msa0170570 | Msa0820250 | 0.803347 | 3.640409e-49 | -8.615850e-47 |
| Msa0174690 | Msa0820250 | 0.800240 | 1.581163e-48 | -8.615850e-47 |
| Msa0193540 | Msa0820250 | 0.801969 | 7.006435e-49 | -8.615850e-47 |
| Msa0198520 | Msa0820250 | 0.836921 | 7.046111e-57 | -8.615850e-47 |
| Msa0198530 | Msa0820250 | 0.848069 | 7.752372e-60 | -8.615850e-47 |
| Msa0207030 | Msa0820250 | 0.803563 | 3.284444e-49 | -8.615850e-47 |
| Msa0377440 | Msa0820250 | 0.811261 | 7.650210e-51 | -8.615850e-47 |
| Msa0378970 | Msa0820250 | 0.800458 | 1.427621e-48 | -8.615850e-47 |
| Msa0381000 | Msa0820250 | 0.829747 | 4.329999e-55 | -8.615850e-47 |
| Msa0381080 | Msa0820250 | 0.826365 | 2.824229e-54 | -8.615850e-47 |
| Msa0390960 | Msa0820250 | 0.814472 | 1.514041e-51 | -8.615850e-47 |
| Msa0394690 | Msa0820250 | 0.816729 | 4.758841e-52 | -8.615850e-47 |
| Msa0413730 | Msa0820250 | 0.817536 | 3.134691e-52 | -8.615850e-47 |
| Msa0428170 | Msa0820250 | 0.817916 | 2.572461e-52 | -8.615850e-47 |
| Msa0461590 | Msa0820250 | 0.812417 | 4.284824e-51 | -8.615850e-47 |
| Msa0464900 | Msa0820250 | 0.806628 | 7.499525e-50 | -8.615850e-47 |
| Msa0474700 | Msa0820250 | 0.836092 | 1.145801e-56 | -8.615850e-47 |
| Msa0239940 | Msa0820250 | 0.814642 | 1.388835e-51 | -8.615850e-47 |
| Msa0251770 | Msa0820250 | 0.810127 | 1.345312e-50 | -8.615850e-47 |
| Msa0259270 | Msa0820250 | 0.814918 | 1.206262e-51 | -8.615850e-47 |
| Msa0267870 | Msa0820250 | 0.811267 | 7.626181e-51 | -8.615850e-47 |
| Msa0274630 | Msa0820250 | 0.806293 | 8.824492e-50 | -8.615850e-47 |
| Msa0278790 | Msa0820250 | 0.802201 | 6.277564e-49 | -8.615850e-47 |
| Msa0282890 | Msa0820250 | 0.803936 | 2.748301e-49 | -8.615850e-47 |
| Msa0285330 | Msa0820250 | 0.811616 | 6.403214e-51 | -8.615850e-47 |
| Msa0295590 | Msa0820250 | 0.847644 | 1.015285e-59 | -8.615850e-47 |
| Msa0299330 | Msa0820250 | 0.830139 | 3.474021e-55 | -8.615850e-47 |
| Msa0308200 | Msa0820250 | 0.810541 | 1.094879e-50 | -8.615850e-47 |
| Msa0318720 | Msa0820250 | 0.804084 | 2.559239e-49 | -8.615850e-47 |
| Msa0324240 | Msa0820250 | 0.842490 | 2.504912e-58 | -8.615850e-47 |
| Msa0327410 | Msa0820250 | 0.807782 | 4.272288e-50 | -8.615850e-47 |
| Msa0343190 | Msa0820250 | 0.834396 | 3.071720e-56 | -8.615850e-47 |
| Msa0484840 | Msa0820250 | 0.822489 | 2.304735e-53 | -8.615850e-47 |
| Msa0505380 | Msa0820250 | 0.808376 | 3.192493e-50 | -8.615850e-47 |
| Msa0511490 | Msa0820250 | 0.817877 | 2.625932e-52 | -8.615850e-47 |
| Msa0530870 | Msa0820250 | -0.806261 | 8.965790e-50 | -8.615850e-47 |
| Msa0533960 | Msa0820250 | -0.800014 | 1.758235e-48 | -8.615850e-47 |
| Msa0556860 | Msa0820250 | 0.818570 | 1.829802e-52 | -8.615850e-47 |
| Msa0600610 | Msa0820250 | 0.803608 | 3.214412e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820250 | MtrunA17_Chr5g0439981 | 95.788 | 641 | 24 | 2 | 1 | 641 | 1 | 638 | 0.0 | 1262 |
| Msa0820250 | MtrunA17_Chr3g0119021 | 49.593 | 369 | 134 | 5 | 186 | 554 | 62 | 378 | 3.92e-113 | 351 |
| Msa0820250 | MtrunA17_Chr3g0119021 | 39.815 | 108 | 54 | 4 | 535 | 635 | 451 | 554 | 1.62e-11 | 67.4 |
| Msa0820250 | MtrunA17_Chr3g0080991 | 28.634 | 227 | 127 | 7 | 286 | 487 | 1459 | 1675 | 2.40e-18 | 90.1 |
| Msa0820250 | MtrunA17_Chr3g0080991 | 26.383 | 235 | 135 | 5 | 286 | 489 | 1986 | 2213 | 5.54e-15 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820250 | AT3G43590.1 | 43.350 | 406 | 188 | 14 | 244 | 625 | 119 | 506 | 2.59e-88 | 286 |
| Msa0820250 | AT5G36240.1 | 40.000 | 160 | 65 | 4 | 350 | 492 | 21 | 166 | 5.24e-27 | 110 |
| Msa0820250 | AT4G36020.1 | 30.332 | 211 | 92 | 8 | 286 | 488 | 134 | 297 | 2.87e-16 | 80.5 |
| Msa0820250 | AT4G36020.1 | 29.577 | 142 | 87 | 4 | 384 | 514 | 102 | 241 | 8.98e-11 | 63.9 |
| Msa0820250 | AT4G36020.3 | 30.332 | 211 | 92 | 8 | 286 | 488 | 134 | 297 | 2.87e-16 | 80.5 |
| Msa0820250 | AT4G36020.3 | 29.577 | 142 | 87 | 4 | 384 | 514 | 102 | 241 | 8.98e-11 | 63.9 |
| Msa0820250 | AT4G36020.2 | 33.636 | 110 | 66 | 2 | 408 | 514 | 102 | 207 | 1.02e-13 | 72.4 |
| Msa0820250 | AT4G36020.2 | 31.638 | 177 | 90 | 6 | 328 | 488 | 102 | 263 | 2.42e-13 | 71.2 |
| Msa0820250 | AT4G36020.2 | 29.714 | 175 | 102 | 5 | 286 | 452 | 102 | 263 | 3.12e-11 | 64.7 |
| Msa0820250 | AT3G43490.1 | 47.297 | 74 | 34 | 3 | 244 | 316 | 107 | 176 | 3.04e-12 | 67.8 |
Find 143 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATGTGACCATTCTCTTTC+TGG | 0.108306 | 5_3:-57474889 | None:intergenic |
| AACAAAGCTATATTATAATT+AGG | 0.180762 | 5_3:+57468760 | Msa0820250:five_prime_UTR |
| TGCTTGAGATGCGGGAATTC+TGG | 0.184551 | 5_3:+57473273 | Msa0820250:CDS |
| CCATTCTCTTTCTGGGATCT+TGG | 0.213203 | 5_3:-57474881 | None:intergenic |
| GAGCCACCTGTGTGCTTCTT+TGG | 0.215455 | 5_3:-57473228 | None:intergenic |
| TACGAGCGACAGTGTTGTTC+TGG | 0.275881 | 5_3:+57471525 | Msa0820250:CDS |
| TCACCAGGTACCACTTTCTC+TGG | 0.278896 | 5_3:-57472229 | None:intergenic |
| CTGGTTGATCCTTCTGAATT+AGG | 0.282005 | 5_3:-57475187 | None:intergenic |
| TTGTTAGTACATGGTGTTAT+TGG | 0.288559 | 5_3:-57475082 | None:intergenic |
| TCAATTCCGAAAGGGATAAT+TGG | 0.291280 | 5_3:+57475053 | Msa0820250:CDS |
| ATCCTCCATCAGATAATGTT+TGG | 0.299939 | 5_3:+57472425 | Msa0820250:CDS |
| TGCTATGTGTGCAAGAAATT+TGG | 0.301951 | 5_3:+57473520 | Msa0820250:CDS |
| ACAAAGCTATATTATAATTA+GGG | 0.305226 | 5_3:+57468761 | Msa0820250:five_prime_UTR |
| TACGAGCGACAATGTTGTTC+TGG | 0.310663 | 5_3:+57469979 | Msa0820250:CDS |
| TATAATCTAGACTAGATTTC+CGG | 0.324367 | 5_3:-57475300 | None:intergenic |
| ATCATGGGTACTCAGCTTCT+AGG | 0.334635 | 5_3:+57475218 | Msa0820250:CDS |
| TCCACAAAACGGCGCCGTAT+TGG | 0.355270 | 5_3:+57468973 | Msa0820250:CDS |
| TCCTCCATCAGATAATGTTT+GGG | 0.366216 | 5_3:+57472426 | Msa0820250:CDS |
| TTGTAGCAAGAAAATTCTTT+TGG | 0.368351 | 5_3:-57473577 | None:intergenic |
| TAAGAGAACTTGAGCATTCT+CGG | 0.372600 | 5_3:-57473942 | None:intergenic |
| TGTAGCTGGATCGGTGTTCT+CGG | 0.372922 | 5_3:-57474580 | None:intergenic |
| AGATCTGCACCTTATGATAA+TGG | 0.377830 | 5_3:+57474917 | Msa0820250:CDS |
| GGTTGGACGGCAGAGCATTC+TGG | 0.390535 | 5_3:+57475016 | Msa0820250:CDS |
| GCTTGAGATGCGGGAATTCT+GGG | 0.391339 | 5_3:+57473274 | Msa0820250:CDS |
| CATGTGACCATTCTCTTTCT+GGG | 0.391712 | 5_3:-57474888 | None:intergenic |
| TAACAGAACTTGAGCATTCT+CGG | 0.403761 | 5_3:-57474644 | None:intergenic |
| TAACTTTATTTCATTGAACT+TGG | 0.404125 | 5_3:+57475406 | Msa0820250:three_prime_UTR |
| TCGGTGACCAGCTAGCTTGC+AGG | 0.405953 | 5_3:-57473193 | None:intergenic |
| AGACCTCCAATTATCCCTTT+CGG | 0.409463 | 5_3:-57475059 | None:intergenic |
| GAGAATGCCGAGGTGGAAAC+AGG | 0.410169 | 5_3:+57471493 | Msa0820250:CDS |
| AACTTTATTTCATTGAACTT+GGG | 0.413801 | 5_3:+57475407 | Msa0820250:three_prime_UTR |
| AATTATAATATAGCTTTGTT+CGG | 0.417180 | 5_3:-57468757 | None:intergenic |
| CGCCTCCTCAGGTAGGCAAC+AGG | 0.425438 | 5_3:+57474831 | Msa0820250:intron |
| CTCAAATTGAACTTCAAGAT+GGG | 0.426576 | 5_3:+57468794 | Msa0820250:exon |
| TGTTTGTCTCATCTTCCAAA+TGG | 0.432554 | 5_3:+57475459 | Msa0820250:three_prime_UTR |
| AGGAGATTAAGACTAAGAAA+AGG | 0.443967 | 5_3:+57471659 | Msa0820250:CDS |
| TTGAGAGAAGTTACAACAAC+GGG | 0.444049 | 5_3:+57475266 | Msa0820250:CDS |
| GCTCAAGTCAAAGTCCCATT+TGG | 0.445916 | 5_3:-57475474 | None:intergenic |
| AGAATGCTCAAGTTCTCTTA+AGG | 0.446626 | 5_3:+57473945 | Msa0820250:CDS |
| CTTGGTTCTGCTGCTTCACC+AGG | 0.448212 | 5_3:-57472244 | None:intergenic |
| TGCTATAACTGCGGCGAAGA+AGG | 0.450158 | 5_3:+57472454 | Msa0820250:CDS |
| CTATTGTTACCATTATCATA+AGG | 0.452102 | 5_3:-57474926 | None:intergenic |
| GCTCAAATTGAACTTCAAGA+TGG | 0.455569 | 5_3:+57468793 | Msa0820250:exon |
| TGCTATAGGTGTGGTGAAGA+AGG | 0.457323 | 5_3:+57474612 | Msa0820250:CDS |
| CTCTCCCTTCAATTCCGAAA+GGG | 0.458644 | 5_3:+57475045 | Msa0820250:CDS |
| CTACACCTAGTTCATGCTAT+AGG | 0.459190 | 5_3:+57474598 | Msa0820250:CDS |
| GTTTGTCTCATCTTCCAAAT+GGG | 0.459851 | 5_3:+57475460 | Msa0820250:three_prime_UTR |
| GGGTACTCAGCTTCTAGGTT+TGG | 0.461563 | 5_3:+57475223 | Msa0820250:CDS |
| TAGCATGAACTAGGTGTAGC+TGG | 0.463123 | 5_3:-57474594 | None:intergenic |
| TTGTTAATTAATTACGAGAA+AGG | 0.463620 | 5_3:+57468726 | None:intergenic |
| ATTATCCCTTTCGGAATTGA+AGG | 0.465646 | 5_3:-57475050 | None:intergenic |
| AATCTCCTCACTATGCAATT+CGG | 0.465805 | 5_3:-57471644 | None:intergenic |
| GTCAGATGGGTCATATTGGT+TGG | 0.466738 | 5_3:+57473605 | Msa0820250:CDS |
| AATCTCCTCACTATGTGATT+CGG | 0.470113 | 5_3:-57470098 | None:intergenic |
| TTCAACTCACAAGCAGCTTA+CGG | 0.471177 | 5_3:-57472297 | None:intergenic |
| TGTGGTCAGATGGGTCATAT+TGG | 0.473124 | 5_3:+57473601 | Msa0820250:CDS |
| TGACAGTATGCTTGAGATGC+GGG | 0.479083 | 5_3:+57473265 | Msa0820250:CDS |
| AATTGGTGCAGGCATGTTCA+AGG | 0.480571 | 5_3:+57473848 | Msa0820250:intron |
| GGCAGTTTGAGTCATAATAA+TGG | 0.485509 | 5_3:+57472532 | Msa0820250:CDS |
| TGCTCTACCTGCAAGCTAGC+TGG | 0.487068 | 5_3:+57473186 | Msa0820250:CDS |
| AGAATGCTCAAGTTCTGTTA+AGG | 0.487479 | 5_3:+57474647 | Msa0820250:CDS |
| ACTTTATTTCATTGAACTTG+GGG | 0.488124 | 5_3:+57475408 | Msa0820250:three_prime_UTR |
| ACGAGCGACAGTGTTGTTCT+GGG | 0.489480 | 5_3:+57471526 | Msa0820250:CDS |
| TTGTATTGACACAGCATAAG+TGG | 0.489891 | 5_3:-57473543 | None:intergenic |
| TTGCTACAAATGTGGTCAGA+TGG | 0.490204 | 5_3:+57473591 | Msa0820250:CDS |
| CACAGACAGTAAAGAAGAAG+AGG | 0.492551 | 5_3:+57468999 | Msa0820250:CDS |
| CACCAGGTACCACTTTCTCT+GGG | 0.492731 | 5_3:-57472228 | None:intergenic |
| TGCTATAATTGCGGCGAACA+AGG | 0.493164 | 5_3:+57473910 | Msa0820250:CDS |
| AACAGAACTTGAGCATTCTC+GGG | 0.493802 | 5_3:-57474643 | None:intergenic |
| TTTGGCAACTCGAGTAGTAA+TGG | 0.502010 | 5_3:+57475241 | Msa0820250:CDS |
| GTAGCTGGATCGGTGTTCTC+GGG | 0.507990 | 5_3:-57474579 | None:intergenic |
| AAGAGAACTTGAGCATTCTC+GGG | 0.510165 | 5_3:-57473941 | None:intergenic |
| GGAGCATGCTAAAGTGGAAA+CGG | 0.511195 | 5_3:+57469946 | Msa0820250:CDS |
| GAGCATGCTAAAGTGGAAAC+GGG | 0.512109 | 5_3:+57469947 | Msa0820250:CDS |
| ACGAGCGACAATGTTGTTCT+GGG | 0.519892 | 5_3:+57469980 | Msa0820250:CDS |
| AAAAGTGGAGCATGCTAAAG+TGG | 0.521401 | 5_3:+57469940 | Msa0820250:CDS |
| CCATGCTTCTTTCAACTGTA+CGG | 0.523223 | 5_3:+57472477 | Msa0820250:CDS |
| CCGCAATTATAGCATGAACT+AGG | 0.524567 | 5_3:-57473901 | None:intergenic |
| CGTGCAATTACTCCACAAAA+CGG | 0.529795 | 5_3:+57468962 | Msa0820250:CDS |
| CCAAGATCCCAGAAAGAGAA+TGG | 0.532653 | 5_3:+57474881 | Msa0820250:CDS |
| TACTGTCTGTGTATCCAATA+CGG | 0.537948 | 5_3:-57468987 | None:intergenic |
| GATTGAAGACCCAGAGAAAG+TGG | 0.538571 | 5_3:+57472219 | Msa0820250:CDS |
| TCAGATGGGTCATATTGGTT+GGG | 0.539041 | 5_3:+57473606 | Msa0820250:CDS |
| TGATGGAGGATCAAAATACC+TGG | 0.539246 | 5_3:-57472413 | None:intergenic |
| CCACACCTATAGCATGAACT+AGG | 0.541534 | 5_3:-57474603 | None:intergenic |
| TGCTACAAATGTGGTCAGAT+GGG | 0.541624 | 5_3:+57473592 | Msa0820250:CDS |
| TTAGTACTATTGTTAGTACA+TGG | 0.541901 | 5_3:-57475091 | None:intergenic |
| CTCACTATGCAATTCGGAAG+CGG | 0.544861 | 5_3:-57471638 | None:intergenic |
| ATTCCGAAAGGGATAATTGG+AGG | 0.544909 | 5_3:+57475056 | Msa0820250:CDS |
| TTGCTCGTATTAACCACCCT+TGG | 0.550857 | 5_3:-57472262 | None:intergenic |
| TCTTTGGACAGTCGCTACTT+CGG | 0.554717 | 5_3:-57473212 | None:intergenic |
| GTGCAGAAATGATTATTCGC+AGG | 0.554730 | 5_3:+57473311 | Msa0820250:CDS |
| AATCAAAACATAGAGGTGGT+TGG | 0.555688 | 5_3:+57474999 | Msa0820250:CDS |
| GATACAGAGAATAAATGAGA+AGG | 0.556502 | 5_3:-57475368 | None:intergenic |
| TGAACTAGGTGTAGCTGGAT+CGG | 0.558727 | 5_3:-57474589 | None:intergenic |
| GAAGATAGAGCTCGAAGAAG+AGG | 0.560360 | 5_3:+57468838 | Msa0820250:CDS |
| TGCTAAAGTGGAAACGGGCA+TGG | 0.560522 | 5_3:+57469952 | Msa0820250:CDS |
| ATTCCCCAAACATTATCTGA+TGG | 0.561098 | 5_3:-57472430 | None:intergenic |
| TCTATCATCAGCGTGGTCCC+AGG | 0.561332 | 5_3:+57472395 | Msa0820250:intron |
| CCAGAAAGAGAATGGTCACA+TGG | 0.563687 | 5_3:+57474889 | Msa0820250:CDS |
| TCTCTCCCTTCAATTCCGAA+AGG | 0.566517 | 5_3:+57475044 | Msa0820250:CDS |
| TTATCCCTTTCGGAATTGAA+GGG | 0.572641 | 5_3:-57475049 | None:intergenic |
| AACCATGCCTGTTTCCACCT+CGG | 0.575569 | 5_3:-57471500 | None:intergenic |
| TGATGATGAAGAAGCAAACA+AGG | 0.576755 | 5_3:+57468901 | Msa0820250:CDS |
| GACCCAGAGAAAGTGGTACC+TGG | 0.583600 | 5_3:+57472226 | Msa0820250:CDS |
| GATGGAACTCCTAATTCAGA+AGG | 0.593536 | 5_3:+57475178 | Msa0820250:CDS |
| TGGTGAAGCAGCAGAACCAA+GGG | 0.595481 | 5_3:+57472246 | Msa0820250:CDS |
| CTTTATTTCATTGAACTTGG+GGG | 0.596067 | 5_3:+57475409 | Msa0820250:three_prime_UTR |
| TTTATTTCATTGAACTTGGG+GGG | 0.596254 | 5_3:+57475410 | Msa0820250:three_prime_UTR |
| ATACAGAGAATAAATGAGAA+GGG | 0.599076 | 5_3:-57475367 | None:intergenic |
| CTGGTGAAGCAGCAGAACCA+AGG | 0.600199 | 5_3:+57472245 | Msa0820250:CDS |
| CGCTTCCGAATCACATAGTG+AGG | 0.601770 | 5_3:+57470093 | Msa0820250:CDS |
| AATCAATGCAGGCAAGCTCA+AGG | 0.602295 | 5_3:+57474550 | Msa0820250:intron |
| AAACTGCCACACACAAAACA+AGG | 0.606860 | 5_3:-57472517 | None:intergenic |
| CCCCAAACATTATCTGATGG+AGG | 0.612821 | 5_3:-57472427 | None:intergenic |
| ACTAGGTGTGGTGGCAGCAG+TGG | 0.613482 | 5_3:-57473884 | None:intergenic |
| TGCCGAGGTGGAAACAGGCA+TGG | 0.613912 | 5_3:+57471498 | Msa0820250:CDS |
| CGCTTCCGAATTGCATAGTG+AGG | 0.623157 | 5_3:+57471639 | Msa0820250:CDS |
| CCTAGTTCATGCTATAATTG+CGG | 0.625684 | 5_3:+57473901 | Msa0820250:CDS |
| CTAAAGAAATCAAAACATAG+AGG | 0.627094 | 5_3:+57474992 | Msa0820250:CDS |
| TTGACAGTATGCTTGAGATG+CGG | 0.629516 | 5_3:+57473264 | Msa0820250:CDS |
| TTATTCGCAGGATGATCTCA+AGG | 0.631797 | 5_3:+57473323 | Msa0820250:CDS |
| AAAACATAGAGGTGGTTGGA+CGG | 0.633746 | 5_3:+57475003 | Msa0820250:CDS |
| CCGTACAGTTGAAAGAAGCA+TGG | 0.635614 | 5_3:-57472477 | None:intergenic |
| ATAGCATGAACTAGGTGTGG+TGG | 0.642456 | 5_3:-57473893 | None:intergenic |
| CCTAGTTCATGCTATAGGTG+TGG | 0.643239 | 5_3:+57474603 | Msa0820250:CDS |
| AAGAAATCAAAACATAGAGG+TGG | 0.643325 | 5_3:+57474995 | Msa0820250:CDS |
| ATTATAGCATGAACTAGGTG+TGG | 0.648256 | 5_3:-57473896 | None:intergenic |
| AACTCACAAGCAGCTTACGG+AGG | 0.651992 | 5_3:-57472294 | None:intergenic |
| AGAGAAGTTACAACAACGGG+TGG | 0.653732 | 5_3:+57475269 | Msa0820250:CDS |
| GTACCCATGATGAAAAGTCC+TGG | 0.660670 | 5_3:-57475206 | None:intergenic |
| GATGGAGGATCAAAATACCT+GGG | 0.663035 | 5_3:-57472412 | None:intergenic |
| CCTCCATCAGATAATGTTTG+GGG | 0.668625 | 5_3:+57472427 | Msa0820250:CDS |
| TGTCCAAAGAAGCACACAGG+TGG | 0.675544 | 5_3:+57473225 | Msa0820250:CDS |
| CAGAAAGAGAATGGTCACAT+GGG | 0.678367 | 5_3:+57474890 | Msa0820250:CDS |
| TGAAGCAGCAGAACCAAGGG+TGG | 0.678993 | 5_3:+57472249 | Msa0820250:CDS |
| AAAAGTGGAGAATGCCGAGG+TGG | 0.683836 | 5_3:+57471486 | Msa0820250:CDS |
| CTAATTCAGAAGGATCAACC+AGG | 0.685700 | 5_3:+57475188 | Msa0820250:CDS |
| TGGGGAATATGCTATAACTG+CGG | 0.685862 | 5_3:+57472445 | Msa0820250:CDS |
| TTTGAGAGAAGTTACAACAA+CGG | 0.685995 | 5_3:+57475265 | Msa0820250:CDS |
| GACTGTCCAAAGAAGCACAC+AGG | 0.690399 | 5_3:+57473222 | Msa0820250:CDS |
| CAATGCAGGCAAGCTCAAGG+TGG | 0.698321 | 5_3:+57474553 | Msa0820250:intron |
| GTAACAATAGTAAAATGACA+AGG | 0.737792 | 5_3:+57474939 | Msa0820250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCAATTTTATTTTAATACTA+AGG | - | chr5_3:57473807-57473826 | None:intergenic | 10.0% |
| !!! | AGTATTTTTAAAAAATAGTT+TGG | - | chr5_3:57474160-57474179 | None:intergenic | 10.0% |
| !! | CTAATAATAATAGATAATAA+TGG | - | chr5_3:57474725-57474744 | None:intergenic | 10.0% |
| !!! | AATTATAATATAGCTTTGTT+CGG | - | chr5_3:57468760-57468779 | None:intergenic | 15.0% |
| !! | AACAAAGCTATATTATAATT+AGG | + | chr5_3:57468760-57468779 | Msa0820250:five_prime_UTR | 15.0% |
| !! | ACAAAGCTATATTATAATTA+GGG | + | chr5_3:57468761-57468780 | Msa0820250:five_prime_UTR | 15.0% |
| !!! | ATAATTAGTTTAAGAACATT+TGG | + | chr5_3:57469814-57469833 | Msa0820250:intron | 15.0% |
| !!! | TAATTAGTTTAAGAACATTT+GGG | + | chr5_3:57469815-57469834 | Msa0820250:intron | 15.0% |
| !! | ACAAAATTCTGAATATTTAT+AGG | + | chr5_3:57470498-57470517 | Msa0820250:intron | 15.0% |
| !! | CAAAATTCTGAATATTTATA+GGG | + | chr5_3:57470499-57470518 | Msa0820250:intron | 15.0% |
| !! | TTAAATTGTTTATTCAAACA+AGG | + | chr5_3:57471230-57471249 | Msa0820250:intron | 15.0% |
| !!! | CAATTTTTCATTGAAAATAT+GGG | - | chr5_3:57471792-57471811 | None:intergenic | 15.0% |
| !! | TTTAGTTGTCTTAAAATTAT+TGG | - | chr5_3:57471951-57471970 | None:intergenic | 15.0% |
| !!! | CAAAATTAGTTTAAGAATTT+CGG | + | chr5_3:57471997-57472016 | Msa0820250:intron | 15.0% |
| !!! | NNNNNTGTTTTTTCACTTTT+TGG | + | chr5_3:57472118-57472137 | Msa0820250:intron | 15.0% |
| !!! | TATTTATCTTTTCTGTTATT+GGG | + | chr5_3:57474012-57474031 | Msa0820250:intron | 15.0% |
| !! | CTAATTAATACAAAAACAAT+GGG | - | chr5_3:57474311-57474330 | None:intergenic | 15.0% |
| !! | TCTAATTAATACAAAAACAA+TGG | - | chr5_3:57474312-57474331 | None:intergenic | 15.0% |
| !!! | TTGTTTTTGTATTAATTAGA+AGG | + | chr5_3:57474312-57474331 | Msa0820250:intron | 15.0% |
| !!! | TGTTTTTGTATTAATTAGAA+GGG | + | chr5_3:57474313-57474332 | Msa0820250:intron | 15.0% |
| !!! | TTTCTATAAATGAAGTTTTA+GGG | - | chr5_3:57475439-57475458 | None:intergenic | 15.0% |
| !!! | ATTTCTATAAATGAAGTTTT+AGG | - | chr5_3:57475440-57475459 | None:intergenic | 15.0% |
| !!! | TTTTTTTCCCAATTTTTCAA+TGG | + | chr5_3:57469107-57469126 | Msa0820250:intron | 20.0% |
| !! | CAAATTTCCATTGAAAAATT+GGG | - | chr5_3:57469117-57469136 | None:intergenic | 20.0% |
| !!! | CAATTTTTCAATGGAAATTT+GGG | + | chr5_3:57469116-57469135 | Msa0820250:intron | 20.0% |
| !!! | AATTTTTCAATGGAAATTTG+GGG | + | chr5_3:57469117-57469136 | Msa0820250:intron | 20.0% |
| !!! | TTTTTTTCAATGGGATTTTT+TGG | + | chr5_3:57469176-57469195 | Msa0820250:intron | 20.0% |
| !!! | TTAAGTTGTTTATTCAAACA+AGG | + | chr5_3:57469680-57469699 | Msa0820250:intron | 20.0% |
| !! | TTAGTCAGATTAACATTAAA+TGG | + | chr5_3:57469740-57469759 | Msa0820250:intron | 20.0% |
| !! | ATTAACCCTTGAAAATATAA+GGG | - | chr5_3:57470245-57470264 | None:intergenic | 20.0% |
| !! | AATTAACCCTTGAAAATATA+AGG | - | chr5_3:57470246-57470265 | None:intergenic | 20.0% |
| !! | CAAAACTGTGAATATTTATA+GGG | - | chr5_3:57470280-57470299 | None:intergenic | 20.0% |
| !! | ACAAAACTGTGAATATTTAT+AGG | - | chr5_3:57470281-57470300 | None:intergenic | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | - | chr5_3:57470468-57470487 | None:intergenic | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | - | chr5_3:57470467-57470486 | None:intergenic | 20.0% |
| !!! | ATGTTGATGGAAAATTTTAT+AGG | + | chr5_3:57470438-57470457 | Msa0820250:intron | 20.0% |
| !!! | TGTTGATGGAAAATTTTATA+GGG | + | chr5_3:57470439-57470458 | Msa0820250:intron | 20.0% |
| !!! | AAAGTGTGATTTTATTTTGT+AGG | + | chr5_3:57470467-57470486 | Msa0820250:intron | 20.0% |
| !!! | AAGTGTGATTTTATTTTGTA+GGG | + | chr5_3:57470468-57470487 | Msa0820250:intron | 20.0% |
| !! | AATAGGGTTAATTAAGTAAA+TGG | - | chr5_3:57470526-57470545 | None:intergenic | 20.0% |
| !!! | TTAATTAACCCTATTTTCAA+TGG | + | chr5_3:57470531-57470550 | Msa0820250:intron | 20.0% |
| !!! | ATTCTGTGTTATGTTTTTTA+TGG | + | chr5_3:57470598-57470617 | Msa0820250:intron | 20.0% |
| !! | ATTAATCATTAGAGCAATTT+GGG | - | chr5_3:57470672-57470691 | None:intergenic | 20.0% |
| !! | AATTAATCATTAGAGCAATT+TGG | - | chr5_3:57470673-57470692 | None:intergenic | 20.0% |
| !!! | TTAATTAGTTTCTGTTTAGT+TGG | + | chr5_3:57470687-57470706 | Msa0820250:intron | 20.0% |
| !! | ATGATTTCATAAACTCAATA+TGG | - | chr5_3:57470975-57470994 | None:intergenic | 20.0% |
| !!! | TTAAGTTGTTTATTCAAACA+AGG | + | chr5_3:57469680-57469699 | Msa0820250:intron | 20.0% |
| !! | TAGTCAGATTTAACATTAAA+TGG | + | chr5_3:57471291-57471310 | Msa0820250:intron | 20.0% |
| !!! | AAATGTTCTTAAACTACTTT+TGG | - | chr5_3:57471358-57471377 | None:intergenic | 20.0% |
| !! | TATAGTTGAAGAAAAAGAAA+AGG | + | chr5_3:57471435-57471454 | Msa0820250:CDS | 20.0% |
| !!! | CCAATTTTTCATTGAAAATA+TGG | - | chr5_3:57471793-57471812 | None:intergenic | 20.0% |
| !!! | CCATATTTTCAATGAAAAAT+TGG | + | chr5_3:57471790-57471809 | Msa0820250:intron | 20.0% |
| !!! | TTCTATGTTTGTGTTTTTTA+TGG | + | chr5_3:57471839-57471858 | Msa0820250:intron | 20.0% |
| !!! | CGAAATTCTTAAACTAATTT+TGG | - | chr5_3:57471999-57472018 | None:intergenic | 20.0% |
| !!! | TTTTGGTATTTTTGAAACAA+TGG | + | chr5_3:57472135-57472154 | Msa0820250:intron | 20.0% |
| !!! | GTATTCTTTTTTCTGTTTAA+AGG | + | chr5_3:57472591-57472610 | Msa0820250:intron | 20.0% |
| !! | TCAAACTTATTATACATAGT+CGG | - | chr5_3:57472637-57472656 | None:intergenic | 20.0% |
| !!! | ATCAACATTGAAGATTTTTT+TGG | + | chr5_3:57472995-57473014 | Msa0820250:intron | 20.0% |
| !!! | AATTGGTAAGTTTGATTTTA+TGG | - | chr5_3:57473035-57473054 | None:intergenic | 20.0% |
| !! | GCTTAAAAATGTTTATATCA+TGG | + | chr5_3:57473109-57473128 | Msa0820250:intron | 20.0% |
| !!! | ATTAATGGATAAATCAGATA+TGG | + | chr5_3:57473434-57473453 | Msa0820250:intron | 20.0% |
| !! | CAAGATTAAAAATAAATCAC+AGG | - | chr5_3:57473653-57473672 | None:intergenic | 20.0% |
| !! | AGGCAAAAAAATGAAATTAA+TGG | - | chr5_3:57473728-57473747 | None:intergenic | 20.0% |
| !!! | ATTTTCAAGATATGTCTATA+AGG | + | chr5_3:57473970-57473989 | Msa0820250:intron | 20.0% |
| !!! | CTATTTATCTTTTCTGTTAT+TGG | + | chr5_3:57474011-57474030 | Msa0820250:intron | 20.0% |
| !! | AATTAATAGGAGATGAATTT+AGG | + | chr5_3:57474210-57474229 | Msa0820250:intron | 20.0% |
| !! | ATTAATAGGAGATGAATTTA+GGG | + | chr5_3:57474211-57474230 | Msa0820250:intron | 20.0% |
| !!! | GTTTTTGTATTAATTAGAAG+GGG | + | chr5_3:57474314-57474333 | Msa0820250:intron | 20.0% |
| !! | TAATAGATAATAATGGCAAA+CGG | - | chr5_3:57474718-57474737 | None:intergenic | 20.0% |
| !!! | AAAAACCATTTTTACAATAG+TGG | + | chr5_3:57475112-57475131 | Msa0820250:CDS | 20.0% |
| !!! | TAACTTTATTTCATTGAACT+TGG | + | chr5_3:57475406-57475425 | Msa0820250:three_prime_UTR | 20.0% |
| !!! | AACTTTATTTCATTGAACTT+GGG | + | chr5_3:57475407-57475426 | Msa0820250:three_prime_UTR | 20.0% |
| ! | CCAAATTTCCATTGAAAAAT+TGG | - | chr5_3:57469118-57469137 | None:intergenic | 25.0% |
| !!! | CCAATTTTTCAATGGAAATT+TGG | + | chr5_3:57469115-57469134 | Msa0820250:intron | 25.0% |
| ! | TAAACTATCATTGAAAGCTA+AGG | - | chr5_3:57469582-57469601 | None:intergenic | 25.0% |
| ! | TATCAATCTTATACCCTAAT+AGG | - | chr5_3:57469706-57469725 | None:intergenic | 25.0% |
| ! | TTAATCTGACTAACCAATTT+AGG | - | chr5_3:57469733-57469752 | None:intergenic | 25.0% |
| !!! | TGTGTTTTTTGAAACTAACT+TGG | + | chr5_3:57469847-57469866 | Msa0820250:intron | 25.0% |
| ! | TATAGCTGAAGAAAAAGAAA+AGG | + | chr5_3:57469889-57469908 | Msa0820250:CDS | 25.0% |
| ! | TTAACCCTTGAAAATATAAG+GGG | - | chr5_3:57470244-57470263 | None:intergenic | 25.0% |
| !! | ACATTTTCCTTAAGCATTTT+AGG | + | chr5_3:57470344-57470363 | Msa0820250:intron | 25.0% |
| !! | CATTTTCCTTAAGCATTTTA+GGG | + | chr5_3:57470345-57470364 | Msa0820250:intron | 25.0% |
| !! | ATGCTGATGGAAAATTTTAT+AGG | + | chr5_3:57470407-57470426 | Msa0820250:intron | 25.0% |
| !! | TGCTGATGGAAAATTTTATA+GGG | + | chr5_3:57470408-57470427 | Msa0820250:intron | 25.0% |
| !! | CCAATTTTCCATTGAAAATA+GGG | - | chr5_3:57470542-57470561 | None:intergenic | 25.0% |
| !! | CCTATTTTCAATGGAAAATT+GGG | + | chr5_3:57470540-57470559 | Msa0820250:intron | 25.0% |
| ! | GCTTATGAAAATAAGCAAAA+AGG | - | chr5_3:57470811-57470830 | None:intergenic | 25.0% |
| !! | ATTTATCGTATCTTTTGTCA+TGG | + | chr5_3:57470883-57470902 | Msa0820250:intron | 25.0% |
| ! | ATTAAATTGTTTATCCAGAC+AGG | + | chr5_3:57470948-57470967 | Msa0820250:intron | 25.0% |
| ! | TTAAATTGTTTATCCAGACA+GGG | + | chr5_3:57470949-57470968 | Msa0820250:intron | 25.0% |
| ! | TTTCAATCATATATCCTACT+AGG | - | chr5_3:57471155-57471174 | None:intergenic | 25.0% |
| ! | TAATTAAGCTTTGCTTATGT+AGG | + | chr5_3:57471408-57471427 | Msa0820250:intron | 25.0% |
| ! | TTTCATTGAAAATATGGGTA+GGG | - | chr5_3:57471787-57471806 | None:intergenic | 25.0% |
| !! | TTTTCATTGAAAATATGGGT+AGG | - | chr5_3:57471788-57471807 | None:intergenic | 25.0% |
| ! | CAAACATAGAAAAACTTTCT+TGG | - | chr5_3:57471830-57471849 | None:intergenic | 25.0% |
| ! | TAAAATTATTGGAGCAATCT+GGG | - | chr5_3:57471940-57471959 | None:intergenic | 25.0% |
| ! | TTAAAATTATTGGAGCAATC+TGG | - | chr5_3:57471941-57471960 | None:intergenic | 25.0% |
| !!! | AACAATGGATTGTCTTATAT+AGG | + | chr5_3:57472150-57472169 | Msa0820250:intron | 25.0% |
| ! | TAAAGAAGAAGAAGAAGAAA+AGG | + | chr5_3:57472183-57472202 | Msa0820250:CDS | 25.0% |
| !! | CATTTTCAATATCACATTTC+AGG | - | chr5_3:57472331-57472350 | None:intergenic | 25.0% |
| ! | CTGAAATGTGATATTGAAAA+TGG | + | chr5_3:57472329-57472348 | Msa0820250:intron | 25.0% |
| ! | TAATGGCAAAAAATGCATTA+TGG | + | chr5_3:57472549-57472568 | Msa0820250:CDS | 25.0% |
| ! | AAAATGCATTATGGTATGTT+TGG | + | chr5_3:57472558-57472577 | Msa0820250:intron | 25.0% |
| !!! | CGTTTATTTTTATTAATCCG+CGG | + | chr5_3:57472671-57472690 | Msa0820250:intron | 25.0% |
| !!! | GTTTATTTTTATTAATCCGC+GGG | + | chr5_3:57472672-57472691 | Msa0820250:intron | 25.0% |
| ! | AGTTTGATATGTTGTAATAG+CGG | + | chr5_3:57472789-57472808 | Msa0820250:intron | 25.0% |
| ! | AAAATCTTCAATGTTGATCA+TGG | - | chr5_3:57472993-57473012 | None:intergenic | 25.0% |
| ! | ATATGACAAAGTCTATTATG+TGG | - | chr5_3:57473077-57473096 | None:intergenic | 25.0% |
| ! | CATAATAGACTTTGTCATAT+TGG | + | chr5_3:57473077-57473096 | Msa0820250:intron | 25.0% |
| !! | ATTTCCTTTTATCTTCTGTA+GGG | + | chr5_3:57473156-57473175 | Msa0820250:intron | 25.0% |
| !! | ATTTTCCTCCTTTTCTTTTA+TGG | + | chr5_3:57473372-57473391 | Msa0820250:intron | 25.0% |
| !! | TTTTCCTCCTTTTCTTTTAT+GGG | + | chr5_3:57473373-57473392 | Msa0820250:intron | 25.0% |
| ! | ATAGTTTCCCATAAAAGAAA+AGG | - | chr5_3:57473383-57473402 | None:intergenic | 25.0% |
| ! | TGAGTTCACTTAGTTATTAA+TGG | + | chr5_3:57473419-57473438 | Msa0820250:intron | 25.0% |
| ! | GTATTTCCTAGTTAAACAAA+GGG | - | chr5_3:57473498-57473517 | None:intergenic | 25.0% |
| ! | TGTATTTCCTAGTTAAACAA+AGG | - | chr5_3:57473499-57473518 | None:intergenic | 25.0% |
| !! | TTGTAGCAAGAAAATTCTTT+TGG | - | chr5_3:57473580-57473599 | None:intergenic | 25.0% |
| !! | TTTTCTTTCCAAAAGTAGTT+AGG | + | chr5_3:57473693-57473712 | Msa0820250:intron | 25.0% |
| !!! | AATTTCATTTTTTTGCCTAC+TGG | + | chr5_3:57473730-57473749 | Msa0820250:intron | 25.0% |
| !!! | ATTTCATTTTTTTGCCTACT+GGG | + | chr5_3:57473731-57473750 | Msa0820250:intron | 25.0% |
| ! | AAATCAAATCAAATTACCCT+TGG | - | chr5_3:57474081-57474100 | None:intergenic | 25.0% |
| ! | TTAATATGAGAAAAGATGAG+AGG | - | chr5_3:57474112-57474131 | None:intergenic | 25.0% |
| !! | TCTCATCTTTTCTCATATTA+AGG | + | chr5_3:57474111-57474130 | Msa0820250:intron | 25.0% |
| ! | TTAATAGGAGATGAATTTAG+GGG | + | chr5_3:57474212-57474231 | Msa0820250:intron | 25.0% |
| !! | CAAATTTGAGACAAGAAAAA+AGG | - | chr5_3:57474254-57474273 | None:intergenic | 25.0% |
| !!! | CTTTTTTCTTGTCTCAAATT+TGG | + | chr5_3:57474252-57474271 | Msa0820250:intron | 25.0% |
| ! | CACATTACAATAACATCTAA+AGG | - | chr5_3:57474443-57474462 | None:intergenic | 25.0% |
| ! | CTTTAGATGTTATTGTAATG+TGG | + | chr5_3:57474441-57474460 | Msa0820250:intron | 25.0% |
| ! | CTATTGTTACCATTATCATA+AGG | - | chr5_3:57474929-57474948 | None:intergenic | 25.0% |
| ! | GTAACAATAGTAAAATGACA+AGG | + | chr5_3:57474939-57474958 | Msa0820250:CDS | 25.0% |
| ! | CTAAAGAAATCAAAACATAG+AGG | + | chr5_3:57474992-57475011 | Msa0820250:CDS | 25.0% |
| ! | TTAGTACTATTGTTAGTACA+TGG | - | chr5_3:57475094-57475113 | None:intergenic | 25.0% |
| ! | TATAATCTAGACTAGATTTC+CGG | - | chr5_3:57475303-57475322 | None:intergenic | 25.0% |
| ! | ATACAGAGAATAAATGAGAA+GGG | - | chr5_3:57475370-57475389 | None:intergenic | 25.0% |
| !! | ACTTTATTTCATTGAACTTG+GGG | + | chr5_3:57475408-57475427 | Msa0820250:three_prime_UTR | 25.0% |
| CTCAAATTGAACTTCAAGAT+GGG | + | chr5_3:57468794-57468813 | Msa0820250:exon | 30.0% | |
| !!! | TGGAAATTTGGGGTTTTTTT+TGG | + | chr5_3:57469127-57469146 | Msa0820250:intron | 30.0% |
| !!! | ACTTGTGAATTGTTTTAGAG+CGG | + | chr5_3:57469232-57469251 | Msa0820250:intron | 30.0% |
| GTTTACTTGAGCTTAATTAG+TGG | + | chr5_3:57469264-57469283 | Msa0820250:intron | 30.0% | |
| TAAGAACTTGTAAGAGTGAT+TGG | + | chr5_3:57469289-57469308 | Msa0820250:intron | 30.0% | |
| AAGAACTTGTAAGAGTGATT+GGG | + | chr5_3:57469290-57469309 | Msa0820250:intron | 30.0% | |
| !! | CTTATTTTCATAAGTTCTCG+AGG | + | chr5_3:57469365-57469384 | Msa0820250:intron | 30.0% |
| !! | ATTAAGTTGTTTCTCCAAAC+AGG | + | chr5_3:57469496-57469515 | Msa0820250:intron | 30.0% |
| !! | TTAAGTTGTTTCTCCAAACA+GGG | + | chr5_3:57469497-57469516 | Msa0820250:intron | 30.0% |
| TTATTCAAACAAGGCCTATT+AGG | + | chr5_3:57469689-57469708 | Msa0820250:intron | 30.0% | |
| TATTCAAACAAGGCCTATTA+GGG | + | chr5_3:57469690-57469709 | Msa0820250:intron | 30.0% | |
| AGATTGATACACACCTAAAT+TGG | + | chr5_3:57469717-57469736 | Msa0820250:intron | 30.0% | |
| ! | TTTACCCCCTTATATTTTCA+AGG | + | chr5_3:57470236-57470255 | Msa0820250:intron | 30.0% |
| ! | TTACCCCCTTATATTTTCAA+GGG | + | chr5_3:57470237-57470256 | Msa0820250:intron | 30.0% |
| TAACCCTTGAAAATATAAGG+GGG | - | chr5_3:57470243-57470262 | None:intergenic | 30.0% | |
| TTTAGTCCCTAAAATGCTTA+AGG | - | chr5_3:57470354-57470373 | None:intergenic | 30.0% | |
| ! | TGCTGACGGAAAATTTTTAT+AGG | + | chr5_3:57470376-57470395 | Msa0820250:intron | 30.0% |
| ! | GCTGACGGAAAATTTTTATA+GGG | + | chr5_3:57470377-57470396 | Msa0820250:intron | 30.0% |
| ATAGGGACTAAAAATGTTGA+TGG | + | chr5_3:57470425-57470444 | Msa0820250:intron | 30.0% | |
| ! | CCCTATTTTCAATGGAAAAT+TGG | + | chr5_3:57470539-57470558 | Msa0820250:intron | 30.0% |
| ! | CCCAATTTTCCATTGAAAAT+AGG | - | chr5_3:57470543-57470562 | None:intergenic | 30.0% |
| TTACTCTCTAAACACTACAA+GGG | + | chr5_3:57470631-57470650 | Msa0820250:intron | 30.0% | |
| TAGTTTCTGTTTAGTTGGAT+TGG | + | chr5_3:57470692-57470711 | Msa0820250:intron | 30.0% | |
| !!! | TTTTTTTCGAGCTTATCTAG+TGG | + | chr5_3:57470715-57470734 | Msa0820250:intron | 30.0% |
| !! | CTTATTTTCATAAGCTCTCT+AGG | + | chr5_3:57470816-57470835 | Msa0820250:intron | 30.0% |
| AATAAGTTATCTCCCAGTTT+AGG | - | chr5_3:57471182-57471201 | None:intergenic | 30.0% | |
| TAAATCTGACTAACCAAGTT+AGG | - | chr5_3:57471283-57471302 | None:intergenic | 30.0% | |
| ATGCTATGCTAACATTGTAT+TGG | + | chr5_3:57471597-57471616 | Msa0820250:intron | 30.0% | |
| AGGAGATTAAGACTAAGAAA+AGG | + | chr5_3:57471659-57471678 | Msa0820250:CDS | 30.0% | |
| TTCATTGAAAATATGGGTAG+GGG | - | chr5_3:57471786-57471805 | None:intergenic | 30.0% | |
| AATGAAAAATTGGCCATTCT+TGG | + | chr5_3:57471800-57471819 | Msa0820250:intron | 30.0% | |
| TCTTCTTCAAAAAAGAGGAT+AGG | - | chr5_3:57471874-57471893 | None:intergenic | 30.0% | |
| TTCAATGTTGATCATGGAAA+AGG | - | chr5_3:57472987-57473006 | None:intergenic | 30.0% | |
| ATCAAACTTACCAATTTCAG+TGG | + | chr5_3:57473039-57473058 | Msa0820250:intron | 30.0% | |
| GAAATTCATTCCACTGAAAT+TGG | - | chr5_3:57473052-57473071 | None:intergenic | 30.0% | |
| ! | GATTTCCTTTTATCTTCTGT+AGG | + | chr5_3:57473155-57473174 | Msa0820250:intron | 30.0% |
| TTTATGGGAAACTATGCTAA+AGG | + | chr5_3:57473388-57473407 | Msa0820250:intron | 30.0% | |
| ! | GAAACTATGCTAAAGGTTTT+TGG | + | chr5_3:57473395-57473414 | Msa0820250:intron | 30.0% |
| ! | TGATTTCCCTTTGTTTAACT+AGG | + | chr5_3:57473489-57473508 | Msa0820250:intron | 30.0% |
| ! | GAATTTTCTTGCTACAAATG+TGG | + | chr5_3:57473583-57473602 | Msa0820250:CDS | 30.0% |
| ! | AAAGCAAACCTAACTACTTT+TGG | - | chr5_3:57473704-57473723 | None:intergenic | 30.0% |
| ATGTTCAAGGTTGAAAAATG+AGG | + | chr5_3:57473861-57473880 | Msa0820250:CDS | 30.0% | |
| CATATTAAGGTTAACTTCCA+AGG | + | chr5_3:57474124-57474143 | Msa0820250:intron | 30.0% | |
| ! | TCTCAAATTTGGTTTCAGAT+GGG | + | chr5_3:57474263-57474282 | Msa0820250:intron | 30.0% |
| AAGAAATCAAAACATAGAGG+TGG | + | chr5_3:57474995-57475014 | Msa0820250:CDS | 30.0% | |
| !! | TTGTTAGTACATGGTGTTAT+TGG | - | chr5_3:57475085-57475104 | None:intergenic | 30.0% |
| GACTACCACTATTGTAAAAA+TGG | - | chr5_3:57475120-57475139 | None:intergenic | 30.0% | |
| !!! | TCAGTTCTAAATCTTTTACG+CGG | + | chr5_3:57475146-57475165 | Msa0820250:CDS | 30.0% |
| TTTGAGAGAAGTTACAACAA+CGG | + | chr5_3:57475265-57475284 | Msa0820250:CDS | 30.0% | |
| GATACAGAGAATAAATGAGA+AGG | - | chr5_3:57475371-57475390 | None:intergenic | 30.0% | |
| ! | CTTTATTTCATTGAACTTGG+GGG | + | chr5_3:57475409-57475428 | Msa0820250:three_prime_UTR | 30.0% |
| TTTATTTCATTGAACTTGGG+GGG | + | chr5_3:57475410-57475429 | Msa0820250:three_prime_UTR | 30.0% | |
| GCTCAAATTGAACTTCAAGA+TGG | + | chr5_3:57468793-57468812 | Msa0820250:exon | 35.0% | |
| ! | TGATGATGAAGAAGCAAACA+AGG | + | chr5_3:57468901-57468920 | Msa0820250:CDS | 35.0% |
| !! | GTGCTTTTTGAATAATCTCG+AGG | - | chr5_3:57468934-57468953 | None:intergenic | 35.0% |
| TACTGTCTGTGTATCCAATA+CGG | - | chr5_3:57468990-57469009 | None:intergenic | 35.0% | |
| AGAACTTGTAAGAGTGATTG+GGG | + | chr5_3:57469291-57469310 | Msa0820250:intron | 35.0% | |
| GTGCTTACGAAAACATCTTA+TGG | + | chr5_3:57469527-57469546 | Msa0820250:intron | 35.0% | |
| TGAAAGCTAAGGTGAATAAG+CGG | - | chr5_3:57469571-57469590 | None:intergenic | 35.0% | |
| GACAATCATTAGAGTTACAC+TGG | + | chr5_3:57469770-57469789 | Msa0820250:intron | 35.0% | |
| TATAACAGCCTACATAAGCA+AGG | - | chr5_3:57469873-57469892 | None:intergenic | 35.0% | |
| ! | AATCAAAGCACCAGAAAAAG+TGG | + | chr5_3:57469925-57469944 | Msa0820250:CDS | 35.0% |
| CAAATATTACAACTCGCAAG+CGG | - | chr5_3:57470010-57470029 | None:intergenic | 35.0% | |
| AATCTCCTCACTATGTGATT+CGG | - | chr5_3:57470101-57470120 | None:intergenic | 35.0% | |
| TGCTTAAGGAAAATGTCACA+GGG | - | chr5_3:57470340-57470359 | None:intergenic | 35.0% | |
| ATGCTTAAGGAAAATGTCAC+AGG | - | chr5_3:57470341-57470360 | None:intergenic | 35.0% | |
| TTAGGGACTAAAAATGCTGA+CGG | + | chr5_3:57470362-57470381 | Msa0820250:intron | 35.0% | |
| ATAGGGACTAAAAATGCTGA+TGG | + | chr5_3:57470394-57470413 | Msa0820250:intron | 35.0% | |
| CTTACTCTCTAAACACTACA+AGG | + | chr5_3:57470630-57470649 | Msa0820250:intron | 35.0% | |
| TAAGAACTCGTGAGATTGTT+TGG | + | chr5_3:57470740-57470759 | Msa0820250:intron | 35.0% | |
| CATGTCTATAAGCTGTATTC+AGG | + | chr5_3:57471002-57471021 | Msa0820250:intron | 35.0% | |
| TTATTCAAACAAGGCCTAGT+AGG | + | chr5_3:57471138-57471157 | Msa0820250:intron | 35.0% | |
| TGATTGAAACACACCTAAAC+TGG | + | chr5_3:57471166-57471185 | Msa0820250:intron | 35.0% | |
| GATTGAAACACACCTAAACT+GGG | + | chr5_3:57471167-57471186 | Msa0820250:intron | 35.0% | |
| TTATTCAAACAAGGCCTAGT+AGG | + | chr5_3:57471138-57471157 | Msa0820250:intron | 35.0% | |
| TATTCAAACAAGGCCTAGTA+GGG | + | chr5_3:57471139-57471158 | Msa0820250:intron | 35.0% | |
| TTTCAGTCATATACCCTACT+AGG | - | chr5_3:57471256-57471275 | None:intergenic | 35.0% | |
| ! | AATCAAAGCACCAGAAAAAG+TGG | + | chr5_3:57469925-57469944 | Msa0820250:CDS | 35.0% |
| ATTGTATTGGATGCCTTGAT+AGG | + | chr5_3:57471610-57471629 | Msa0820250:intron | 35.0% | |
| AATCTCCTCACTATGCAATT+CGG | - | chr5_3:57471647-57471666 | None:intergenic | 35.0% | |
| CACAGTCTTCTTCAAAAAAG+AGG | - | chr5_3:57471879-57471898 | None:intergenic | 35.0% | |
| ATCCTCCATCAGATAATGTT+TGG | + | chr5_3:57472425-57472444 | Msa0820250:CDS | 35.0% | |
| TCCTCCATCAGATAATGTTT+GGG | + | chr5_3:57472426-57472445 | Msa0820250:CDS | 35.0% | |
| ATTCCCCAAACATTATCTGA+TGG | - | chr5_3:57472433-57472452 | None:intergenic | 35.0% | |
| !!! | AAGAAACCTTGTTTTGTGTG+TGG | + | chr5_3:57472511-57472530 | Msa0820250:CDS | 35.0% |
| GGCAGTTTGAGTCATAATAA+TGG | + | chr5_3:57472532-57472551 | Msa0820250:CDS | 35.0% | |
| !! | ATAAGTTTGATCGATTTGCG+TGG | + | chr5_3:57472647-57472666 | Msa0820250:intron | 35.0% |
| GCTATAGTGCTACAAAATAG+TGG | + | chr5_3:57472813-57472832 | Msa0820250:intron | 35.0% | |
| GTGTTGTCAACCATGAAAAA+TGG | + | chr5_3:57472881-57472900 | Msa0820250:intron | 35.0% | |
| TTGTCAACCATGAAAAATGG+TGG | + | chr5_3:57472884-57472903 | Msa0820250:intron | 35.0% | |
| !! | GAACAAACCACCATTTTTCA+TGG | - | chr5_3:57472894-57472913 | None:intergenic | 35.0% |
| !! | ATGGTGGTTTGTTCAAATTC+CGG | + | chr5_3:57472900-57472919 | Msa0820250:intron | 35.0% |
| GGAAAATGAAGCGAAAAAGA+TGG | - | chr5_3:57473359-57473378 | None:intergenic | 35.0% | |
| GTTTCCCATAAAAGAAAAGG+AGG | - | chr5_3:57473380-57473399 | None:intergenic | 35.0% | |
| TGCTATGTGTGCAAGAAATT+TGG | + | chr5_3:57473520-57473539 | Msa0820250:CDS | 35.0% | |
| ! | TTGTATTGACACAGCATAAG+TGG | - | chr5_3:57473546-57473565 | None:intergenic | 35.0% |
| GCATGCTTATGAAGATCAAT+TGG | + | chr5_3:57473831-57473850 | Msa0820250:intron | 35.0% | |
| TTATGAAGATCAATTGGTGC+AGG | + | chr5_3:57473837-57473856 | Msa0820250:intron | 35.0% | |
| ATTATAGCATGAACTAGGTG+TGG | - | chr5_3:57473899-57473918 | None:intergenic | 35.0% | |
| CCTAGTTCATGCTATAATTG+CGG | + | chr5_3:57473901-57473920 | Msa0820250:CDS | 35.0% | |
| TAAGAGAACTTGAGCATTCT+CGG | - | chr5_3:57473945-57473964 | None:intergenic | 35.0% | |
| AGAATGCTCAAGTTCTCTTA+AGG | + | chr5_3:57473945-57473964 | Msa0820250:CDS | 35.0% | |
| TCTAGACCATCATTTCTGAA+TGG | + | chr5_3:57474045-57474064 | Msa0820250:intron | 35.0% | |
| !! | AGTTTGGTGTATGTATACCT+TGG | - | chr5_3:57474144-57474163 | None:intergenic | 35.0% |
| ! | GTCTCAAATTTGGTTTCAGA+TGG | + | chr5_3:57474262-57474281 | Msa0820250:intron | 35.0% |
| AACCAAAACACCCTTTAACA+GGG | - | chr5_3:57474379-57474398 | None:intergenic | 35.0% | |
| TAACCAAAACACCCTTTAAC+AGG | - | chr5_3:57474380-57474399 | None:intergenic | 35.0% | |
| !!! | GTTAAAGGGTGTTTTGGTTA+CGG | + | chr5_3:57474380-57474399 | Msa0820250:intron | 35.0% |
| !! | TACCTTTTGGTAACAGGTTT+TGG | + | chr5_3:57474410-57474429 | Msa0820250:intron | 35.0% |
| !! | ACCTTTTGGTAACAGGTTTT+GGG | + | chr5_3:57474411-57474430 | Msa0820250:intron | 35.0% |
| TAATGAGGATCAATCAATGC+AGG | + | chr5_3:57474539-57474558 | Msa0820250:intron | 35.0% | |
| TAACAGAACTTGAGCATTCT+CGG | - | chr5_3:57474647-57474666 | None:intergenic | 35.0% | |
| AGAATGCTCAAGTTCTGTTA+AGG | + | chr5_3:57474647-57474666 | Msa0820250:CDS | 35.0% | |
| AGATCTGCACCTTATGATAA+TGG | + | chr5_3:57474917-57474936 | Msa0820250:CDS | 35.0% | |
| AATCAAAACATAGAGGTGGT+TGG | + | chr5_3:57474999-57475018 | Msa0820250:CDS | 35.0% | |
| TTATCCCTTTCGGAATTGAA+GGG | - | chr5_3:57475052-57475071 | None:intergenic | 35.0% | |
| ATTATCCCTTTCGGAATTGA+AGG | - | chr5_3:57475053-57475072 | None:intergenic | 35.0% | |
| TCAATTCCGAAAGGGATAAT+TGG | + | chr5_3:57475053-57475072 | Msa0820250:CDS | 35.0% | |
| ! | TTTACGCGGAATTTTCATGA+TGG | + | chr5_3:57475160-57475179 | Msa0820250:CDS | 35.0% |
| TTGAGAGAAGTTACAACAAC+GGG | + | chr5_3:57475266-57475285 | Msa0820250:CDS | 35.0% | |
| TGTTTGTCTCATCTTCCAAA+TGG | + | chr5_3:57475459-57475478 | Msa0820250:three_prime_UTR | 35.0% | |
| GTTTGTCTCATCTTCCAAAT+GGG | + | chr5_3:57475460-57475479 | Msa0820250:three_prime_UTR | 35.0% | |
| GAACCAAAAAGAAATCAGCG+AGG | + | chr5_3:57468816-57468835 | Msa0820250:CDS | 40.0% | |
| !!! | CTTCCTCGCTGATTTCTTTT+TGG | - | chr5_3:57468822-57468841 | None:intergenic | 40.0% |
| ! | CGTTTTGTGGAGTAATTGCA+CGG | - | chr5_3:57468964-57468983 | None:intergenic | 40.0% |
| CGTGCAATTACTCCACAAAA+CGG | + | chr5_3:57468962-57468981 | Msa0820250:CDS | 40.0% | |
| CACAGACAGTAAAGAAGAAG+AGG | + | chr5_3:57468999-57469018 | Msa0820250:CDS | 40.0% | |
| !!! | TGTTTTAGAGCGGTTTGCAT+TGG | + | chr5_3:57469242-57469261 | Msa0820250:intron | 40.0% |
| GTAGCTTACATTAAGCGCTT+AGG | + | chr5_3:57469455-57469474 | Msa0820250:intron | 40.0% | |
| !! | TAACTTGGCCTTGCTTATGT+AGG | + | chr5_3:57469862-57469881 | Msa0820250:intron | 40.0% |
| !!! | TTAGCATGCTCCACTTTTTC+TGG | - | chr5_3:57469938-57469957 | None:intergenic | 40.0% |
| AAAAGTGGAGCATGCTAAAG+TGG | + | chr5_3:57469940-57469959 | Msa0820250:CDS | 40.0% | |
| ATGTCGTGCTAACACTGTAT+TGG | + | chr5_3:57470051-57470070 | Msa0820250:intron | 40.0% | |
| ! | ACTGTATTGGATGCATTGAC+AGG | + | chr5_3:57470064-57470083 | Msa0820250:intron | 40.0% |
| TTGAAAATATGGGTAGGGGT+GGG | - | chr5_3:57471782-57471801 | None:intergenic | 40.0% | |
| ATTGAAAATATGGGTAGGGG+TGG | - | chr5_3:57471783-57471802 | None:intergenic | 40.0% | |
| CTTTCTTGGTTGACCAAGAA+TGG | - | chr5_3:57471816-57471835 | None:intergenic | 40.0% | |
| TTCAACTCACAAGCAGCTTA+CGG | - | chr5_3:57472300-57472319 | None:intergenic | 40.0% | |
| CATATACCCAAAGTAAGCCT+TGG | - | chr5_3:57472368-57472387 | None:intergenic | 40.0% | |
| TTTCTGTTCTATCATCAGCG+TGG | + | chr5_3:57472388-57472407 | Msa0820250:intron | 40.0% | |
| GATGGAGGATCAAAATACCT+GGG | - | chr5_3:57472415-57472434 | None:intergenic | 40.0% | |
| TGATGGAGGATCAAAATACC+TGG | - | chr5_3:57472416-57472435 | None:intergenic | 40.0% | |
| CCTCCATCAGATAATGTTTG+GGG | + | chr5_3:57472427-57472446 | Msa0820250:CDS | 40.0% | |
| TGGGGAATATGCTATAACTG+CGG | + | chr5_3:57472445-57472464 | Msa0820250:CDS | 40.0% | |
| CCATGCTTCTTTCAACTGTA+CGG | + | chr5_3:57472477-57472496 | Msa0820250:CDS | 40.0% | |
| AAACTGCCACACACAAAACA+AGG | - | chr5_3:57472520-57472539 | None:intergenic | 40.0% | |
| ATCGCTTAGCGAAACAATAG+TGG | - | chr5_3:57472851-57472870 | None:intergenic | 40.0% | |
| TCGTCCCTACAGAAGATAAA+AGG | - | chr5_3:57473163-57473182 | None:intergenic | 40.0% | |
| TTGACAGTATGCTTGAGATG+CGG | + | chr5_3:57473264-57473283 | Msa0820250:CDS | 40.0% | |
| GTGCAGAAATGATTATTCGC+AGG | + | chr5_3:57473311-57473330 | Msa0820250:CDS | 40.0% | |
| TTATTCGCAGGATGATCTCA+AGG | + | chr5_3:57473323-57473342 | Msa0820250:CDS | 40.0% | |
| TTGCTACAAATGTGGTCAGA+TGG | + | chr5_3:57473591-57473610 | Msa0820250:CDS | 40.0% | |
| TGCTACAAATGTGGTCAGAT+GGG | + | chr5_3:57473592-57473611 | Msa0820250:CDS | 40.0% | |
| ! | TCAGATGGGTCATATTGGTT+GGG | + | chr5_3:57473606-57473625 | Msa0820250:CDS | 40.0% |
| CCGCAATTATAGCATGAACT+AGG | - | chr5_3:57473904-57473923 | None:intergenic | 40.0% | |
| AAGAGAACTTGAGCATTCTC+GGG | - | chr5_3:57473944-57473963 | None:intergenic | 40.0% | |
| AGAAATGATGGTCTAGATCG+AGG | - | chr5_3:57474042-57474061 | None:intergenic | 40.0% | |
| AGAGAGCCATTCAGAAATGA+TGG | - | chr5_3:57474054-57474073 | None:intergenic | 40.0% | |
| AGACAAGAAAAAAGGTCCCT+CGG | - | chr5_3:57474246-57474265 | None:intergenic | 40.0% | |
| ACCAGAGAAAAACAGCTACA+GGG | - | chr5_3:57474356-57474375 | None:intergenic | 40.0% | |
| ! | TTTTCTCTGGTCCCTGTTAA+AGG | + | chr5_3:57474365-57474384 | Msa0820250:intron | 40.0% |
| TTTCTCTGGTCCCTGTTAAA+GGG | + | chr5_3:57474366-57474385 | Msa0820250:intron | 40.0% | |
| ACCCAAAACCTGTTACCAAA+AGG | - | chr5_3:57474415-57474434 | None:intergenic | 40.0% | |
| CTACACCTAGTTCATGCTAT+AGG | + | chr5_3:57474598-57474617 | Msa0820250:CDS | 40.0% | |
| AACAGAACTTGAGCATTCTC+GGG | - | chr5_3:57474646-57474665 | None:intergenic | 40.0% | |
| CATGTGACCATTCTCTTTCT+GGG | - | chr5_3:57474891-57474910 | None:intergenic | 40.0% | |
| CAGAAAGAGAATGGTCACAT+GGG | + | chr5_3:57474890-57474909 | Msa0820250:CDS | 40.0% | |
| AAAACATAGAGGTGGTTGGA+CGG | + | chr5_3:57475003-57475022 | Msa0820250:CDS | 40.0% | |
| ATTCCGAAAGGGATAATTGG+AGG | + | chr5_3:57475056-57475075 | Msa0820250:CDS | 40.0% | |
| AGACCTCCAATTATCCCTTT+CGG | - | chr5_3:57475062-57475081 | None:intergenic | 40.0% | |
| GATGGAACTCCTAATTCAGA+AGG | + | chr5_3:57475178-57475197 | Msa0820250:CDS | 40.0% | |
| CTGGTTGATCCTTCTGAATT+AGG | - | chr5_3:57475190-57475209 | None:intergenic | 40.0% | |
| CTAATTCAGAAGGATCAACC+AGG | + | chr5_3:57475188-57475207 | Msa0820250:CDS | 40.0% | |
| ! | TCAACCAGGACTTTTCATCA+TGG | + | chr5_3:57475202-57475221 | Msa0820250:CDS | 40.0% |
| ! | CAACCAGGACTTTTCATCAT+GGG | + | chr5_3:57475203-57475222 | Msa0820250:CDS | 40.0% |
| TTTGGCAACTCGAGTAGTAA+TGG | + | chr5_3:57475241-57475260 | Msa0820250:CDS | 40.0% | |
| GAAGATAGAGCTCGAAGAAG+AGG | + | chr5_3:57468838-57468857 | Msa0820250:CDS | 45.0% | |
| AAGCACAATAGAGCCCTGTT+TGG | - | chr5_3:57469513-57469532 | None:intergenic | 45.0% | |
| GGAGCATGCTAAAGTGGAAA+CGG | + | chr5_3:57469946-57469965 | Msa0820250:CDS | 45.0% | |
| GAGCATGCTAAAGTGGAAAC+GGG | + | chr5_3:57469947-57469966 | Msa0820250:CDS | 45.0% | |
| TACGAGCGACAATGTTGTTC+TGG | + | chr5_3:57469979-57469998 | Msa0820250:CDS | 45.0% | |
| ACGAGCGACAATGTTGTTCT+GGG | + | chr5_3:57469980-57469999 | Msa0820250:CDS | 45.0% | |
| CTCTAAACACTACAAGGGTG+TGG | + | chr5_3:57470636-57470655 | Msa0820250:intron | 45.0% | |
| AAACTCAATATGGCCCTGTC+TGG | - | chr5_3:57470965-57470984 | None:intergenic | 45.0% | |
| TGACTGAAACACGCCTAACT+TGG | + | chr5_3:57471267-57471286 | Msa0820250:intron | 45.0% | |
| !!! | TCGGCATTCTCCACTTTTTC+TGG | - | chr5_3:57471484-57471503 | None:intergenic | 45.0% |
| AGAAAAAGTGGAGAATGCCG+AGG | + | chr5_3:57471483-57471502 | Msa0820250:CDS | 45.0% | |
| CTCACTATGCAATTCGGAAG+CGG | - | chr5_3:57471641-57471660 | None:intergenic | 45.0% | |
| TGAAAATATGGGTAGGGGTG+GGG | - | chr5_3:57471781-57471800 | None:intergenic | 45.0% | |
| GCTTTGTAGTGCTAGAGAGT+AGG | - | chr5_3:57471902-57471921 | None:intergenic | 45.0% | |
| TCTCTAGCACTACAAAGCTG+TGG | + | chr5_3:57471904-57471923 | Msa0820250:intron | 45.0% | |
| GATTGAAGACCCAGAGAAAG+TGG | + | chr5_3:57472219-57472238 | Msa0820250:CDS | 45.0% | |
| TTGCTCGTATTAACCACCCT+TGG | - | chr5_3:57472265-57472284 | None:intergenic | 45.0% | |
| ATGGTACTGTACTGTCTCCA+AGG | + | chr5_3:57472348-57472367 | Msa0820250:intron | 45.0% | |
| ACTGTCTCCAAGGCTTACTT+TGG | + | chr5_3:57472358-57472377 | Msa0820250:intron | 45.0% | |
| CTGTCTCCAAGGCTTACTTT+GGG | + | chr5_3:57472359-57472378 | Msa0820250:intron | 45.0% | |
| CCCCAAACATTATCTGATGG+AGG | - | chr5_3:57472430-57472449 | None:intergenic | 45.0% | |
| CCGTACAGTTGAAAGAAGCA+TGG | - | chr5_3:57472480-57472499 | None:intergenic | 45.0% | |
| CTCAAGTCAATCCAGCCTAA+TGG | - | chr5_3:57472771-57472790 | None:intergenic | 45.0% | |
| GTTCAAATTCCGGAACGCTA+TGG | + | chr5_3:57472910-57472929 | Msa0820250:intron | 45.0% | |
| CTATAGCAACCATAGCGTTC+CGG | - | chr5_3:57472922-57472941 | None:intergenic | 45.0% | |
| GAACGCTATGGTTGCTATAG+CGG | + | chr5_3:57472922-57472941 | Msa0820250:intron | 45.0% | |
| ! | GTGATGGAGATGCAACTAAG+CGG | + | chr5_3:57472946-57472965 | Msa0820250:intron | 45.0% |
| TCTTTGGACAGTCGCTACTT+CGG | - | chr5_3:57473215-57473234 | None:intergenic | 45.0% | |
| TGACAGTATGCTTGAGATGC+GGG | + | chr5_3:57473265-57473284 | Msa0820250:CDS | 45.0% | |
| TGTGGTCAGATGGGTCATAT+TGG | + | chr5_3:57473601-57473620 | Msa0820250:CDS | 45.0% | |
| GTCAGATGGGTCATATTGGT+TGG | + | chr5_3:57473605-57473624 | Msa0820250:CDS | 45.0% | |
| TGATGTGCTTTACTCCCAGT+AGG | - | chr5_3:57473748-57473767 | None:intergenic | 45.0% | |
| AATTGGTGCAGGCATGTTCA+AGG | + | chr5_3:57473848-57473867 | Msa0820250:intron | 45.0% | |
| ATAGCATGAACTAGGTGTGG+TGG | - | chr5_3:57473896-57473915 | None:intergenic | 45.0% | |
| TGCTATAATTGCGGCGAACA+AGG | + | chr5_3:57473910-57473929 | Msa0820250:CDS | 45.0% | |
| TGAATGGCTCTCTCTTTCCA+AGG | + | chr5_3:57474061-57474080 | Msa0820250:intron | 45.0% | |
| GAATGGCTCTCTCTTTCCAA+GGG | + | chr5_3:57474062-57474081 | Msa0820250:intron | 45.0% | |
| ! | AATTTGGTTTCAGATGGGCG+TGG | + | chr5_3:57474268-57474287 | Msa0820250:intron | 45.0% |
| GACCAGAGAAAAACAGCTAC+AGG | - | chr5_3:57474357-57474376 | None:intergenic | 45.0% | |
| !!! | GTCCCTGTTAAAGGGTGTTT+TGG | + | chr5_3:57474374-57474393 | Msa0820250:intron | 45.0% |
| !! | CTGTTACCAAAAGGTACCCA+GGG | - | chr5_3:57474406-57474425 | None:intergenic | 45.0% |
| CACCTTGCACAAGATGAACA+GGG | - | chr5_3:57474476-57474495 | None:intergenic | 45.0% | |
| AATCAATGCAGGCAAGCTCA+AGG | + | chr5_3:57474550-57474569 | Msa0820250:intron | 45.0% | |
| TGAACTAGGTGTAGCTGGAT+CGG | - | chr5_3:57474592-57474611 | None:intergenic | 45.0% | |
| TAGCATGAACTAGGTGTAGC+TGG | - | chr5_3:57474597-57474616 | None:intergenic | 45.0% | |
| CCACACCTATAGCATGAACT+AGG | - | chr5_3:57474606-57474625 | None:intergenic | 45.0% | |
| CCTAGTTCATGCTATAGGTG+TGG | + | chr5_3:57474603-57474622 | Msa0820250:CDS | 45.0% | |
| TGCTATAGGTGTGGTGAAGA+AGG | + | chr5_3:57474612-57474631 | Msa0820250:CDS | 45.0% | |
| !! | CCATTCTCTTTCTGGGATCT+TGG | - | chr5_3:57474884-57474903 | None:intergenic | 45.0% |
| CCAAGATCCCAGAAAGAGAA+TGG | + | chr5_3:57474881-57474900 | Msa0820250:CDS | 45.0% | |
| CCATGTGACCATTCTCTTTC+TGG | - | chr5_3:57474892-57474911 | None:intergenic | 45.0% | |
| CCAGAAAGAGAATGGTCACA+TGG | + | chr5_3:57474889-57474908 | Msa0820250:CDS | 45.0% | |
| TCTCTCCCTTCAATTCCGAA+AGG | + | chr5_3:57475044-57475063 | Msa0820250:CDS | 45.0% | |
| CTCTCCCTTCAATTCCGAAA+GGG | + | chr5_3:57475045-57475064 | Msa0820250:CDS | 45.0% | |
| GTACCCATGATGAAAAGTCC+TGG | - | chr5_3:57475209-57475228 | None:intergenic | 45.0% | |
| ATCATGGGTACTCAGCTTCT+AGG | + | chr5_3:57475218-57475237 | Msa0820250:CDS | 45.0% | |
| AGAGAAGTTACAACAACGGG+TGG | + | chr5_3:57475269-57475288 | Msa0820250:CDS | 45.0% | |
| GCTCAAGTCAAAGTCCCATT+TGG | - | chr5_3:57475477-57475496 | None:intergenic | 45.0% | |
| !!! | ATTTTTTTTTTTTTTTTCAA+TGG | + | chr5_3:57469166-57469185 | Msa0820250:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTTTCAAT+GGG | + | chr5_3:57469167-57469186 | Msa0820250:intron | 5.0% |
| !!! | AATTTATTTTATCTTTTTTA+TGG | + | chr5_3:57469430-57469449 | Msa0820250:intron | 5.0% |
| !! | AAAATTCTAAATTAATTAAT+AGG | + | chr5_3:57474197-57474216 | Msa0820250:intron | 5.0% |
| !! | AAATAATAAATTAATTAATG+AGG | + | chr5_3:57474524-57474543 | Msa0820250:intron | 5.0% |
| TGCTAAAGTGGAAACGGGCA+TGG | + | chr5_3:57469952-57469971 | Msa0820250:CDS | 50.0% | |
| CGCTTCCGAATCACATAGTG+AGG | + | chr5_3:57470093-57470112 | Msa0820250:CDS | 50.0% | |
| AAAAGTGGAGAATGCCGAGG+TGG | + | chr5_3:57471486-57471505 | Msa0820250:CDS | 50.0% | |
| AACCATGCCTGTTTCCACCT+CGG | - | chr5_3:57471503-57471522 | None:intergenic | 50.0% | |
| ! | TACGAGCGACAGTGTTGTTC+TGG | + | chr5_3:57471525-57471544 | Msa0820250:CDS | 50.0% |
| ! | ACGAGCGACAGTGTTGTTCT+GGG | + | chr5_3:57471526-57471545 | Msa0820250:CDS | 50.0% |
| GGAAGCGGTGTTTCCTATCA+AGG | - | chr5_3:57471626-57471645 | None:intergenic | 50.0% | |
| CGCTTCCGAATTGCATAGTG+AGG | + | chr5_3:57471639-57471658 | Msa0820250:CDS | 50.0% | |
| GAAAATATGGGTAGGGGTGG+GGG | - | chr5_3:57471780-57471799 | None:intergenic | 50.0% | |
| CACCAGGTACCACTTTCTCT+GGG | - | chr5_3:57472231-57472250 | None:intergenic | 50.0% | |
| TCACCAGGTACCACTTTCTC+TGG | - | chr5_3:57472232-57472251 | None:intergenic | 50.0% | |
| TGGTGAAGCAGCAGAACCAA+GGG | + | chr5_3:57472246-57472265 | Msa0820250:CDS | 50.0% | |
| AACTCACAAGCAGCTTACGG+AGG | - | chr5_3:57472297-57472316 | None:intergenic | 50.0% | |
| TGCTATAACTGCGGCGAAGA+AGG | + | chr5_3:57472454-57472473 | Msa0820250:CDS | 50.0% | |
| ! | GACTGTCCAAAGAAGCACAC+AGG | + | chr5_3:57473222-57473241 | Msa0820250:CDS | 50.0% |
| ! | TGTCCAAAGAAGCACACAGG+TGG | + | chr5_3:57473225-57473244 | Msa0820250:CDS | 50.0% |
| TGCTTGAGATGCGGGAATTC+TGG | + | chr5_3:57473273-57473292 | Msa0820250:CDS | 50.0% | |
| GCTTGAGATGCGGGAATTCT+GGG | + | chr5_3:57473274-57473293 | Msa0820250:CDS | 50.0% | |
| ATTTAGGGGAGAGTTTGCCG+AGG | + | chr5_3:57474226-57474245 | Msa0820250:intron | 50.0% | |
| TTTAGGGGAGAGTTTGCCGA+GGG | + | chr5_3:57474227-57474246 | Msa0820250:intron | 50.0% | |
| !!! | GCCCTGTAGCTGTTTTTCTC+TGG | + | chr5_3:57474352-57474371 | Msa0820250:intron | 50.0% |
| !! | CCTGTTACCAAAAGGTACCC+AGG | - | chr5_3:57474407-57474426 | None:intergenic | 50.0% |
| !! | CCTGGGTACCTTTTGGTAAC+AGG | + | chr5_3:57474404-57474423 | Msa0820250:intron | 50.0% |
| GTCCCTGTTCATCTTGTGCA+AGG | + | chr5_3:57474471-57474490 | Msa0820250:intron | 50.0% | |
| GCACCTTGCACAAGATGAAC+AGG | - | chr5_3:57474477-57474496 | None:intergenic | 50.0% | |
| ! | TGTAGCTGGATCGGTGTTCT+CGG | - | chr5_3:57474583-57474602 | None:intergenic | 50.0% |
| TGTTTCCTGTTGCCTACCTG+AGG | - | chr5_3:57474839-57474858 | None:intergenic | 50.0% | |
| GGGTACTCAGCTTCTAGGTT+TGG | + | chr5_3:57475223-57475242 | Msa0820250:CDS | 50.0% | |
| ! | ACAACGGGTGGTAGCTTTTC+CGG | + | chr5_3:57475281-57475300 | Msa0820250:exon | 50.0% |
| TCCACAAAACGGCGCCGTAT+TGG | + | chr5_3:57468973-57468992 | Msa0820250:CDS | 55.0% | |
| !! | TCCAATACGGCGCCGTTTTG+TGG | - | chr5_3:57468977-57468996 | None:intergenic | 55.0% |
| GAGAATGCCGAGGTGGAAAC+AGG | + | chr5_3:57471493-57471512 | Msa0820250:CDS | 55.0% | |
| GACCCAGAGAAAGTGGTACC+TGG | + | chr5_3:57472226-57472245 | Msa0820250:CDS | 55.0% | |
| !! | CTTGGTTCTGCTGCTTCACC+AGG | - | chr5_3:57472247-57472266 | None:intergenic | 55.0% |
| CTGGTGAAGCAGCAGAACCA+AGG | + | chr5_3:57472245-57472264 | Msa0820250:CDS | 55.0% | |
| TGAAGCAGCAGAACCAAGGG+TGG | + | chr5_3:57472249-57472268 | Msa0820250:CDS | 55.0% | |
| TCTATCATCAGCGTGGTCCC+AGG | + | chr5_3:57472395-57472414 | Msa0820250:intron | 55.0% | |
| ! | TAATCCGCGGGCTGAGTCTA+TGG | + | chr5_3:57472684-57472703 | Msa0820250:intron | 55.0% |
| TGTACCATAGACTCAGCCCG+CGG | - | chr5_3:57472691-57472710 | None:intergenic | 55.0% | |
| CGGGCTGAGTCTATGGTACA+AGG | + | chr5_3:57472691-57472710 | Msa0820250:intron | 55.0% | |
| TGGCTAGGTGATACTGCTCC+TGG | + | chr5_3:57472732-57472751 | Msa0820250:intron | 55.0% | |
| AATGGTGCATGCACTGCACC+AGG | - | chr5_3:57472753-57472772 | None:intergenic | 55.0% | |
| GGTGCAGTGCATGCACCATT+AGG | + | chr5_3:57472753-57472772 | Msa0820250:intron | 55.0% | |
| CAGTGCATGCACCATTAGGC+TGG | + | chr5_3:57472757-57472776 | Msa0820250:intron | 55.0% | |
| TGGTTGCTATAGCGGCGTGA+TGG | + | chr5_3:57472930-57472949 | Msa0820250:intron | 55.0% | |
| TGCTCTACCTGCAAGCTAGC+TGG | + | chr5_3:57473186-57473205 | Msa0820250:CDS | 55.0% | |
| GAGCCACCTGTGTGCTTCTT+TGG | - | chr5_3:57473231-57473250 | None:intergenic | 55.0% | |
| !!! | GGTGTTTTGGTTACGGCCCT+GGG | + | chr5_3:57474387-57474406 | Msa0820250:intron | 55.0% |
| ! | TTACGGCCCTGGGTACCTTT+TGG | + | chr5_3:57474397-57474416 | Msa0820250:intron | 55.0% |
| CAATGCAGGCAAGCTCAAGG+TGG | + | chr5_3:57474553-57474572 | Msa0820250:intron | 55.0% | |
| ! | GTAGCTGGATCGGTGTTCTC+GGG | - | chr5_3:57474582-57474601 | None:intergenic | 55.0% |
| TTCCTGTTGCCTACCTGAGG+AGG | - | chr5_3:57474836-57474855 | None:intergenic | 55.0% | |
| TGCCGAGGTGGAAACAGGCA+TGG | + | chr5_3:57471498-57471517 | Msa0820250:CDS | 60.0% | |
| ! | TCGGTGACCAGCTAGCTTGC+AGG | - | chr5_3:57473196-57473215 | None:intergenic | 60.0% |
| ACTAGGTGTGGTGGCAGCAG+TGG | - | chr5_3:57473887-57473906 | None:intergenic | 60.0% | |
| !!! | GGGTGTTTTGGTTACGGCCC+TGG | + | chr5_3:57474386-57474405 | Msa0820250:intron | 60.0% |
| ! | GGTTGGACGGCAGAGCATTC+TGG | + | chr5_3:57475016-57475035 | Msa0820250:CDS | 60.0% |
| TGTGCTGCGTTCGCCTCCTC+AGG | + | chr5_3:57474820-57474839 | Msa0820250:intron | 65.0% | |
| CTGCGTTCGCCTCCTCAGGT+AGG | + | chr5_3:57474824-57474843 | Msa0820250:intron | 65.0% | |
| CGCCTCCTCAGGTAGGCAAC+AGG | + | chr5_3:57474831-57474850 | Msa0820250:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 57468728 | 57475502 | 57468728 | ID=Msa0820250;Name=Msa0820250 |
| chr5_3 | mRNA | 57468728 | 57475502 | 57468728 | ID=Msa0820250-mRNA-1;Parent=Msa0820250;Name=Msa0820250-mRNA-1;_AED=0.11;_eAED=0.11;_QI=84|1|1|1|1|1|12|208|641 |
| chr5_3 | exon | 57468728 | 57469054 | 57468728 | ID=Msa0820250-mRNA-1:exon:17335;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57469884 | 57470001 | 57469884 | ID=Msa0820250-mRNA-1:exon:17336;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57470086 | 57470183 | 57470086 | ID=Msa0820250-mRNA-1:exon:17337;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57471430 | 57471547 | 57471430 | ID=Msa0820250-mRNA-1:exon:17338;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57471632 | 57471723 | 57471632 | ID=Msa0820250-mRNA-1:exon:17339;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57472172 | 57472309 | 57472172 | ID=Msa0820250-mRNA-1:exon:17340;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57472406 | 57472570 | 57472406 | ID=Msa0820250-mRNA-1:exon:17341;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57473177 | 57473344 | 57473177 | ID=Msa0820250-mRNA-1:exon:17342;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57473511 | 57473627 | 57473511 | ID=Msa0820250-mRNA-1:exon:17343;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57473859 | 57473966 | 57473859 | ID=Msa0820250-mRNA-1:exon:17344;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57474561 | 57474668 | 57474561 | ID=Msa0820250-mRNA-1:exon:17345;Parent=Msa0820250-mRNA-1 |
| chr5_3 | exon | 57474842 | 57475502 | 57474842 | ID=Msa0820250-mRNA-1:exon:17346;Parent=Msa0820250-mRNA-1 |
| chr5_3 | five_prime_UTR | 57468728 | 57468811 | 57468728 | ID=Msa0820250-mRNA-1:five_prime_utr;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57468812 | 57469054 | 57468812 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57469884 | 57470001 | 57469884 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57470086 | 57470183 | 57470086 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57471430 | 57471547 | 57471430 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57471632 | 57471723 | 57471632 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57472172 | 57472309 | 57472172 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57472406 | 57472570 | 57472406 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57473177 | 57473344 | 57473177 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57473511 | 57473627 | 57473511 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57473859 | 57473966 | 57473859 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57474561 | 57474668 | 57474561 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | CDS | 57474842 | 57475294 | 57474842 | ID=Msa0820250-mRNA-1:cds;Parent=Msa0820250-mRNA-1 |
| chr5_3 | three_prime_UTR | 57475295 | 57475502 | 57475295 | ID=Msa0820250-mRNA-1:three_prime_utr;Parent=Msa0820250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
